Sat Jul 17 07:07:17 UTC 2021 I: starting to build libcifpp/bullseye/armhf on jenkins on '2021-07-17 07:07' Sat Jul 17 07:07:17 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_27/9565/console.log Sat Jul 17 07:07:17 UTC 2021 I: Downloading source for bullseye/libcifpp=1.0.1-3 --2021-07-17 07:07:18-- http://cdn-fastly.deb.debian.org/debian/pool/main/libc/libcifpp/libcifpp_1.0.1-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2231 (2.2K) Saving to: ‘libcifpp_1.0.1-3.dsc’ 0K .. 100% 217M=0s 2021-07-17 07:07:18 (217 MB/s) - ‘libcifpp_1.0.1-3.dsc’ saved [2231/2231] Sat Jul 17 07:07:18 UTC 2021 I: libcifpp_1.0.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libcifpp Binary: libcifpp-dev, libcifpp1 Architecture: any Version: 1.0.1-3 Maintainer: Debian Med Packaging Team Uploaders: Maarten L. Hekkelman , Andreas Tille , Homepage: https://github.com/PDB-REDO/libcifpp Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/libcifpp Vcs-Git: https://salsa.debian.org/med-team/libcifpp.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, pkg-config Build-Depends: autoconf-archive, debhelper-compat (= 13), libboost-date-time-dev, libboost-dev, libboost-iostreams-dev, libboost-system-dev, po-debconf Package-List: libcifpp-dev deb libdevel optional arch=any libcifpp1 deb libs optional arch=any Checksums-Sha1: 56e9bbbd70e8f239c053006115dde868ef132b55 1217914 libcifpp_1.0.1.orig.tar.gz 3758262de8d5e853548f1096ea93103f568511cc 6480 libcifpp_1.0.1-3.debian.tar.xz Checksums-Sha256: 62279453b6b5aaf446de10ea7dbdc8ac3c9b78f1453019face097fd2c148cb1f 1217914 libcifpp_1.0.1.orig.tar.gz 040eb45dec72eee69901385f2b1b7092864acb2edf3c90d6a60280bf5e75b5ed 6480 libcifpp_1.0.1-3.debian.tar.xz Files: 0440beab23fc4460bcd2a02a2bb8086e 1217914 libcifpp_1.0.1.orig.tar.gz f81bc72cd6b49b3dbcd02853a148eb13 6480 libcifpp_1.0.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAl/y0s4SHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHLm8P/0haZ/hRj5ij5vN7kyVFP3suvypegS5a mVOuxSACXTwqEcGKwWoZTwAC8KrXMx2VwUqczUVft/T3RuqdFaeRG5PzwOO0uSZ6 5Z19E5rIh5DRHIC0WWmUPxcZvRpGTumuWyCwelvQEboSabtvX+IIRuxyPrb7QmY4 FwHetftMB3HZZDFkkqnUkCw7eIzAmXyXj/Te8/eYiE+Ene+wW/OupfRhGdDCBvAX 17s9NSy80yIphjUTtpUTbKvnV+FHrO3akPAVjNsIDE/aMnxLyt1of3HDR1FQdV6G 8jPieBqEWxHtmu3goBMVJ3+B0IcOwJT0YC3fHPpaihqmauCt3SU6jegvvb6nR5Yo aai8YHNKqhLgBmR6d3S7pHU4D5A74DRV3fnAyyL8HCAjUNxfTBkf1kfJXjE/72Mz y6nR7Tmn7vBWkWftBW5YbgOB7EEfCfACb30eV8GBZTOQjZLgtaNvaTA+nG5Ns6pi r8B9UEgVfpwIWBzLppyn4r1QoXkN7dFrL+vnh/zG0TMCM7Fe+nIninwj+oxAwImP VRir2bx2jBt2+4fHrISPOdqhIGvxDi5mmoMKpzIfhRDbYxMWrChEp+ZaD1ccXVuu 4mhDpCwcnCSvkpSBdxMKCSGqPOsTtX5Hl6x540E70uCNeC1frV6RCuLhygEddILU 3g4zSjyviy92 =dz2l -----END PGP SIGNATURE----- Sat Jul 17 07:07:18 UTC 2021 I: Checking whether the package is not for us Sat Jul 17 07:07:18 UTC 2021 I: Starting 1st build on remote node jtx1a-armhf-rb.debian.net. Sat Jul 17 07:07:18 UTC 2021 I: Preparing to do remote build '1' on jtx1a-armhf-rb.debian.net. Sat Jul 17 07:19:31 UTC 2021 I: Deleting $TMPDIR on jtx1a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 16 19:07:40 -12 2021 I: pbuilder-time-stamp: 1626505660 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libcifpp_1.0.1-3.dsc] I: copying [./libcifpp_1.0.1.orig.tar.gz] I: copying [./libcifpp_1.0.1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.6CdYGass/trustedkeys.kbx': General error gpgv: Signature made Sun Jan 3 20:33:18 2021 -12 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libcifpp_1.0.1-3.dsc dpkg-source: info: extracting libcifpp in libcifpp-1.0.1 dpkg-source: info: unpacking libcifpp_1.0.1.orig.tar.gz dpkg-source: info: unpacking libcifpp_1.0.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying update-script dpkg-source: info: applying work-around-weird-stl-problem.patch dpkg-source: info: applying configure-patch dpkg-source: info: applying reproducible-build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/28221/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='192873e723414d7994ef1a2e6f702aee' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='28221' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.SPgCmUXfYz/pbuilderrc_BHcD --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.SPgCmUXfYz/b1 --logfile b1/build.log libcifpp_1.0.1-3.dsc' SUDO_GID='114' SUDO_UID='108' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux jtx1a 5.10.0-7-arm64 #1 SMP Debian 5.10.40-1 (2021-05-28) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 14 21:27 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/28221/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: autoconf-archive, debhelper-compat (= 13), libboost-date-time-dev, libboost-dev, libboost-iostreams-dev, libboost-system-dev, po-debconf dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on autoconf-archive; however: Package autoconf-archive is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-date-time-dev; however: Package libboost-date-time-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-system-dev; however: Package libboost-system-dev is not installed. pbuilder-satisfydepends-dummy depends on po-debconf; however: Package po-debconf is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} autoconf-archive{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libboost-date-time-dev{a} libboost-date-time1.74-dev{a} libboost-date-time1.74.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-serialization1.74-dev{a} libboost-serialization1.74.0{a} libboost-system-dev{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost1.74-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu-dev{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 40.5 MB of archives. After unpacking 277 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf autoconf-archive all 20190106-2.1 [746 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf icu-devtools armhf 67.1-7 [180 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libboost1.74-dev armhf 1.74.0-9 [9534 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf libboost-date-time1.74.0 armhf 1.74.0-9 [241 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf libboost-serialization1.74.0 armhf 1.74.0-9 [321 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libboost-serialization1.74-dev armhf 1.74.0-9 [394 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libboost-date-time1.74-dev armhf 1.74.0-9 [250 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libboost-date-time-dev armhf 1.74.0.3 [4332 B] Get: 40 http://deb.debian.org/debian bullseye/main armhf libboost-dev armhf 1.74.0.3 [4548 B] Get: 41 http://deb.debian.org/debian bullseye/main armhf libboost-regex1.74.0 armhf 1.74.0-9 [459 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf libicu-dev armhf 67.1-7 [9343 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf libboost-regex1.74-dev armhf 1.74.0-9 [572 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf libboost-iostreams1.74-dev armhf 1.74.0-9 [271 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf libboost-iostreams-dev armhf 1.74.0.3 [4316 B] Get: 46 http://deb.debian.org/debian bullseye/main armhf libboost-system1.74.0 armhf 1.74.0-9 [242 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf libboost-system1.74-dev armhf 1.74.0-9 [243 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf libboost-system-dev armhf 1.74.0.3 [4468 B] Fetched 40.5 MB in 20s (2069 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package autoconf-archive. Preparing to unpack .../05-autoconf-archive_20190106-2.1_all.deb ... Unpacking autoconf-archive (20190106-2.1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../08-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... 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Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:armhf (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up autoconf-archive (20190106-2.1) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libboost-system1.74-dev:armhf (1.74.0-9) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up libboost-regex1.74.0:armhf (1.74.0-9) ... Setting up autopoint (0.21-4) ... Setting up icu-devtools (67.1-7) ... Setting up libboost-serialization1.74.0:armhf (1.74.0-9) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libboost-dev:armhf (1.74.0.3) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/libcifpp-1.0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libcifpp_1.0.1-3_source.changes dpkg-buildpackage: info: source package libcifpp dpkg-buildpackage: info: source version 1.0.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maarten L. Hekkelman dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libcifpp-dev.substvars debian/libcifpp1.substvars debian/files rm -fr -- debian/libcifpp-dev/ debian/tmp/ debian/libcifpp1/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config install -d debian/.debhelper/bucket/files cp -an --reflink=auto config/config.guess debian/.debhelper/bucket/files/19c12bb2ca19e68724c2854ed0512469518df19b0710cc2011a5ca540810979c.tmp mv debian/.debhelper/bucket/files/19c12bb2ca19e68724c2854ed0512469518df19b0710cc2011a5ca540810979c.tmp debian/.debhelper/bucket/files/19c12bb2ca19e68724c2854ed0512469518df19b0710cc2011a5ca540810979c cp -f /usr/share/misc/config.guess ./config/config.guess cp -an --reflink=auto config/config.sub debian/.debhelper/bucket/files/f7197ddfb309e86d5fbd7d3b440a5ababfbd4aac1e1f53b492e28e54db58b222.tmp mv debian/.debhelper/bucket/files/f7197ddfb309e86d5fbd7d3b440a5ababfbd4aac1e1f53b492e28e54db58b222.tmp debian/.debhelper/bucket/files/f7197ddfb309e86d5fbd7d3b440a5ababfbd4aac1e1f53b492e28e54db58b222 cp -f /usr/share/misc/config.sub ./config/config.sub dh_autoreconf find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config/m4'. libtoolize: copying file 'config/m4/libtool.m4' libtoolize: copying file 'config/m4/ltoptions.m4' libtoolize: copying file 'config/m4/ltsugar.m4' libtoolize: copying file 'config/m4/ltversion.m4' libtoolize: copying file 'config/m4/lt~obsolete.m4' libtoolize: Consider adding '-I config/m4' to ACLOCAL_AMFLAGS in Makefile.am. find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/build/libcifpp-1.0.1' dh_auto_configure -- --enable-shared --disable-static --disable-revision install -d /build/libcifpp-1.0.1/debian/.debhelper/generated/_source/home ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-shared --disable-static --disable-revision checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking whether g++ supports C++17 features with -std=c++17... yes checking whether C++ compiler accepts -fstandalone-debug... no checking how to run the C++ preprocessor... g++ -std=c++17 -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking filesystem usability... yes checking filesystem presence... yes checking for filesystem... yes checking if linking to stdc++fs is required... no checking for a BSD-compatible install... /usr/bin/install -c checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for a sed that does not truncate output... /bin/sed checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -std=c++17 -E checking for ld used by g++ -std=c++17... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ -std=c++17 linker (/usr/bin/ld) supports shared libraries... yes checking for g++ -std=c++17 option to produce PIC... -fPIC -DPIC checking if g++ -std=c++17 PIC flag -fPIC -DPIC works... yes checking if g++ -std=c++17 static flag -static works... yes checking if g++ -std=c++17 supports -c -o file.o... yes checking if g++ -std=c++17 supports -c -o file.o... (cached) yes checking whether the g++ -std=c++17 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for pkg-config... no checking for floor... yes checking for pow... yes checking for rint... yes checking for sqrt... yes checking for strchr... yes checking for strerror... yes checking sys/ioctl.h usability... yes checking sys/ioctl.h presence... yes checking for sys/ioctl.h... yes checking termios.h usability... yes checking termios.h presence... yes checking for termios.h... yes checking for stdbool.h that conforms to C99... no checking for _Bool... no checking for ptrdiff_t... yes checking whether make sets $(MAKE)... yes checking for boostlib >= 1.71 (107100)... yes checking whether the Boost::IOStreams library is available... yes checking for exit in -lboost_iostreams... yes checking whether the Boost::Date_Time library is available... yes checking for exit in -lboost_date_time... yes configure: creating ./config.status config.status: creating GNUmakefile config.status: creating libcifpp.pc config.status: creating include/cif++/Config.hpp config.status: executing libtool commands make[1]: Leaving directory '/build/libcifpp-1.0.1' dh_auto_build make -j3 make[1]: Entering directory '/build/libcifpp-1.0.1' mkdir -p obj >> src/AtomType.cpp >> src/Cif2PDB.cpp >> src/Cif++.cpp >> src/CifParser.cpp >> src/CifUtils.cpp >> src/CifValidator.cpp >> src/Compound.cpp >> src/PDB2Cif.cpp >> src/PDB2CifRemark3.cpp In file included from /usr/include/c++/10/vector:72, from /usr/include/boost/date_time/date_facet.hpp:15, from /usr/include/boost/date_time/gregorian/gregorian_io.hpp:16, from /usr/include/boost/date_time/gregorian/gregorian.hpp:31, from src/PDB2Cif.cpp:34: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >> src/Point.cpp >> src/Secondary.cpp In file included from /usr/include/c++/10/bits/stl_algo.h:61, from /usr/include/c++/10/algorithm:62, from /usr/include/c++/10/ext/slist:47, from /usr/include/boost/algorithm/string/std/slist_traits.hpp:16, from /usr/include/boost/algorithm/string/std_containers_traits.hpp:23, from /usr/include/boost/algorithm/string.hpp:18, from src/Secondary.cpp:35: /usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = mmcif::Accumulator::candidate; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 134 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ >> src/Structure.cpp In file included from /usr/include/c++/10/vector:72, from /usr/include/c++/10/functional:62, from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13, from /usr/include/c++/10/algorithm:74, from /usr/include/c++/10/ext/slist:47, from /usr/include/boost/algorithm/string/std/slist_traits.hpp:16, from /usr/include/boost/algorithm/string/std_containers_traits.hpp:23, from /usr/include/boost/algorithm/string.hpp:18, from src/Secondary.cpp:35: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mmcif::Accumulator::candidate&}; _Tp = mmcif::Accumulator::candidate; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from /usr/include/c++/10/functional:62, from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13, from /usr/include/c++/10/algorithm:74, from /usr/include/c++/10/ext/slist:47, from /usr/include/boost/algorithm/string/std/slist_traits.hpp:16, from /usr/include/boost/algorithm/string/std_containers_traits.hpp:23, from /usr/include/boost/algorithm/string.hpp:18, from src/Secondary.cpp:35: /usr/include/c++/10/bits/stl_vector.h: In member function ‘double mmcif::Res::CalculateSurface(const Point&, float, const std::vector&)’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ >> src/Symmetry.cpp >> src/TlsParser.cpp /bin/sh /build/libcifpp-1.0.1/libtool --silent --tag=CXX --mode=link g++ -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libcifpp-1.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -Wall -Wno-multichar -I include -O2 -DCACHE_DIR='"/var/cache/libcifpp"' -DNDEBUG -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf -version-info 1:0:0 -o libcifpp.la -rpath /usr/lib/arm-linux-gnueabihf obj/AtomType.lo obj/Cif2PDB.lo obj/Cif++.lo obj/CifParser.lo obj/CifUtils.lo obj/CifValidator.lo obj/Compound.lo obj/PDB2Cif.lo obj/PDB2CifRemark3.lo obj/Point.lo obj/Secondary.lo obj/Structure.lo obj/Symmetry.lo obj/TlsParser.lo -latomic -lboost_iostreams -lboost_date_time make[1]: Leaving directory '/build/libcifpp-1.0.1' rm -f debian/libcifpp-dev.debhelper.log debian/libcifpp1.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/libcifpp-1.0.1' /usr/bin/make test make[2]: Entering directory '/build/libcifpp-1.0.1' >> test/unit-test.cpp >>> building unit-test g++ -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libcifpp-1.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -Wall -Wno-multichar -I include -O2 -DCACHE_DIR='"/var/cache/libcifpp"' -DNDEBUG -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf -o test/unit-test obj/unit-test.o -L.libs -lcifpp -latomic -lboost_iostreams -lboost_date_time cd test; LD_LIBRARY_PATH=../.libs ./unit-test Running 10 test cases... Could not assign value 'vijf' to column _cat_2.id *** No errors detected make[2]: Leaving directory '/build/libcifpp-1.0.1' make[1]: Leaving directory '/build/libcifpp-1.0.1' create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/libcifpp-dev.substvars debian/libcifpp1.substvars rm -fr -- debian/.debhelper/generated/libcifpp-dev/ debian/libcifpp-dev/ debian/tmp/ debian/.debhelper/generated/libcifpp1/ debian/libcifpp1/ dh_auto_install install -d /build/libcifpp-1.0.1/debian/tmp make -j1 install DESTDIR=/build/libcifpp-1.0.1/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/libcifpp-1.0.1' install -d /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf /bin/sh /build/libcifpp-1.0.1/libtool --mode=install install libcifpp.la /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf libtool: install: install .libs/libcifpp.so.1.0.0 /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 libtool: install: (cd /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libcifpp.so.1.0.0 libcifpp.so.1 || { rm -f libcifpp.so.1 && ln -s libcifpp.so.1.0.0 libcifpp.so.1; }; }) libtool: install: (cd /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libcifpp.so.1.0.0 libcifpp.so || { rm -f libcifpp.so && ln -s libcifpp.so.1.0.0 libcifpp.so; }; }) libtool: install: install .libs/libcifpp.lai /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcifpp.la libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' install -d /build/libcifpp-1.0.1/debian/tmp/usr/share/libcifpp for d in isomers.txt dictionaries/mmcif_ddl.dic dictionaries/mmcif_pdbx_v50.dic; do \ install -m644 rsrc/$d /build/libcifpp-1.0.1/debian/tmp/usr/share/libcifpp; \ done gzip -f /build/libcifpp-1.0.1/debian/tmp/usr/share/libcifpp/* install -d /build/libcifpp-1.0.1/debian/tmp/etc/cron.weekly install -m755 tools/update-dictionary-script /build/libcifpp-1.0.1/debian/tmp/etc/cron.weekly/libcifpp install -d /build/libcifpp-1.0.1/debian/tmp/usr/include/cif++ for f in AtomType.hpp CifParser.hpp Compound.hpp PDB2CifRemark3.hpp Structure.hpp Cif2PDB.hpp CifUtils.hpp Config.hpp Point.hpp Symmetry.hpp Cif++.hpp CifValidator.hpp PDB2Cif.hpp Secondary.hpp TlsParser.hpp; do install include/cif++/$f /build/libcifpp-1.0.1/debian/tmp/usr/include/cif++/$f; done install -d /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig install -m 644 libcifpp.pc /build/libcifpp-1.0.1/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/libcifpp.pc make[1]: Leaving directory '/build/libcifpp-1.0.1' dh_install install -d debian/libcifpp-dev//usr cp --reflink=auto -a debian/tmp/usr/include debian/libcifpp-dev//usr/ install -d debian/libcifpp-dev//usr/lib/arm-linux-gnueabihf cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/libcifpp.so debian/libcifpp-dev//usr/lib/arm-linux-gnueabihf/ install -d debian/libcifpp-dev//usr/lib/arm-linux-gnueabihf/pkgconfig cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/libcifpp.pc debian/libcifpp-dev//usr/lib/arm-linux-gnueabihf/pkgconfig/ install -d debian/.debhelper/generated/libcifpp-dev install -d debian/libcifpp1//etc/cron.weekly cp --reflink=auto -a debian/tmp/etc/cron.weekly/libcifpp debian/libcifpp1//etc/cron.weekly/ install -d debian/libcifpp1//usr/lib/arm-linux-gnueabihf cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/libcifpp.so.1 debian/tmp/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 debian/libcifpp1//usr/lib/arm-linux-gnueabihf/ install -d debian/libcifpp1//usr/share/libcifpp cp --reflink=auto -a debian/tmp/usr/share/libcifpp/isomers.txt.gz debian/tmp/usr/share/libcifpp/mmcif_ddl.dic.gz debian/tmp/usr/share/libcifpp/mmcif_pdbx_v50.dic.gz debian/libcifpp1//usr/share/libcifpp/ install -d debian/.debhelper/generated/libcifpp1 dh_installdocs install -d debian/libcifpp-dev/usr/share/doc/libcifpp-dev install -p -m0644 debian/copyright debian/libcifpp-dev/usr/share/doc/libcifpp-dev/copyright install -d debian/libcifpp1/usr/share/doc/libcifpp1 cp --reflink=auto -a ./README.md debian/libcifpp1/usr/share/doc/libcifpp1 chmod -R u\+rw,go=rX debian/libcifpp1/usr/share/doc install -p -m0644 debian/copyright debian/libcifpp1/usr/share/doc/libcifpp1/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/libcifpp1/usr/share/doc/libcifpp1/changelog.Debian install -p -m0644 ./changelog debian/libcifpp1/usr/share/doc/libcifpp1/changelog install -p -m0644 debian/changelog debian/libcifpp-dev/usr/share/doc/libcifpp-dev/changelog.Debian install -p -m0644 ./changelog debian/libcifpp-dev/usr/share/doc/libcifpp-dev/changelog dh_installexamples install -d debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples cp --reflink=auto -a ./examples/1cbs.cif.gz debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples cp --reflink=auto -a ./examples/example.cpp debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples cp --reflink=auto -a ./examples/makefile debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples dh_installdebconf install -d debian/libcifpp-dev/DEBIAN install -d debian/libcifpp1/DEBIAN cp -f debian/libcifpp1.config debian/libcifpp1/DEBIAN/config [META] Replace #TOKEN#s in "debian/libcifpp1/DEBIAN/config" chmod 0755 -- debian/libcifpp1/DEBIAN/config po2debconf debian/libcifpp1.templates > debian/libcifpp1/DEBIAN/templates (grep -a -s -v misc:Depends debian/libcifpp1.substvars; echo "misc:Depends=debconf (>= 0.5) | debconf-2.0") > debian/libcifpp1.substvars.new mv debian/libcifpp1.substvars.new debian/libcifpp1.substvars [META] Append autosnippet "postrm-debconf" to postrm [debian/libcifpp1.postrm.debhelper] dh_perl dh_link rm -f debian/libcifpp-dev/usr/lib/arm-linux-gnueabihf/libcifpp.so ln -s libcifpp.so.1.0.0 debian/libcifpp-dev/usr/lib/arm-linux-gnueabihf/libcifpp.so rm -f debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1 ln -s libcifpp.so.1.0.0 debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1 dh_strip_nondeterminism Using 1609743724 as canonical time Normalizing debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples/1cbs.cif.gz using File::StripNondeterminism::handlers::gzip Using 1609743724 as canonical time Normalizing debian/libcifpp1/usr/share/libcifpp/isomers.txt.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/libcifpp1/usr/share/libcifpp/mmcif_ddl.dic.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/libcifpp1/usr/share/libcifpp/mmcif_pdbx_v50.dic.gz using File::StripNondeterminism::handlers::gzip dh_compress cd debian/libcifpp-dev cd debian/libcifpp1 chmod a-x usr/share/doc/libcifpp1/changelog usr/share/doc/libcifpp1/changelog.Debian chmod a-x usr/share/doc/libcifpp-dev/changelog usr/share/doc/libcifpp-dev/changelog.Debian gzip -9nf usr/share/doc/libcifpp-dev/changelog usr/share/doc/libcifpp-dev/changelog.Debian gzip -9nf usr/share/doc/libcifpp1/changelog usr/share/doc/libcifpp1/changelog.Debian cd '/build/libcifpp-1.0.1' cd '/build/libcifpp-1.0.1' dh_fixperms find debian/libcifpp-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcifpp1 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcifpp1/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp1/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcifpp1/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcifpp-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp1 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp1/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcifpp-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz -a dwz -- debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 dh_strip -a install -d debian/.debhelper/libcifpp1/dbgsym-root/usr/lib/debug/.build-id/67 objcopy --only-keep-debug --compress-debug-sections debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 debian/.debhelper/libcifpp1/dbgsym-root/usr/lib/debug/.build-id/67/c43c59e29b19c27179a11c98c80d0f9fdece77.debug chmod 0644 -- debian/.debhelper/libcifpp1/dbgsym-root/usr/lib/debug/.build-id/67/c43c59e29b19c27179a11c98c80d0f9fdece77.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 objcopy --add-gnu-debuglink debian/.debhelper/libcifpp1/dbgsym-root/usr/lib/debug/.build-id/67/c43c59e29b19c27179a11c98c80d0f9fdece77.debug debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 install -d debian/.debhelper/libcifpp1/dbgsym-root/usr/share/doc ln -s libcifpp1 debian/.debhelper/libcifpp1/dbgsym-root/usr/share/doc/libcifpp1-dbgsym dh_makeshlibs -a rm -f debian/libcifpp-dev/DEBIAN/shlibs rm -f debian/libcifpp1/DEBIAN/shlibs echo "libcifpp 1 libcifpp1 (>= 1.0.1)" >> debian/libcifpp1/DEBIAN/shlibs chmod 0644 -- debian/libcifpp1/DEBIAN/shlibs mv debian/.debhelper/generated/libcifpp1/triggers.new debian/.debhelper/generated/libcifpp1/triggers dh_shlibdeps -a dpkg-shlibdeps -Tdebian/libcifpp1.substvars debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol pthread_create used by debian/libcifpp1/usr/lib/arm-linux-gnueabihf/libcifpp.so.1.0.0 found in none of the libraries dh_installdeb cp -f debian/libcifpp1.postinst debian/libcifpp1/DEBIAN/postinst [META] Replace #TOKEN#s in "debian/libcifpp1/DEBIAN/postinst" chmod 0755 -- debian/libcifpp1/DEBIAN/postinst cp -f debian/libcifpp1.postrm debian/libcifpp1/DEBIAN/postrm [META] Replace #TOKEN#s in "debian/libcifpp1/DEBIAN/postrm" chmod 0755 -- debian/libcifpp1/DEBIAN/postrm install -p -m0644 debian/.debhelper/generated/libcifpp1/triggers debian/libcifpp1/DEBIAN/triggers find debian/libcifpp1/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/libcifpp1/DEBIAN/conffiles chmod 0644 -- debian/libcifpp1/DEBIAN/conffiles dh_gencontrol echo misc:Depends= >> debian/libcifpp-dev.substvars echo misc:Pre-Depends= >> debian/libcifpp-dev.substvars dpkg-gencontrol -plibcifpp-dev -ldebian/changelog -Tdebian/libcifpp-dev.substvars -Pdebian/libcifpp-dev echo misc:Pre-Depends= >> debian/libcifpp1.substvars install -d debian/.debhelper/libcifpp1/dbgsym-root/DEBIAN dpkg-gencontrol -plibcifpp1 -ldebian/changelog -Tdebian/libcifpp1.substvars -Pdebian/.debhelper/libcifpp1/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=libcifpp1-dbgsym "-DDepends=libcifpp1 (= \${binary:Version})" "-DDescription=debug symbols for libcifpp1" -DBuild-Ids=67c43c59e29b19c27179a11c98c80d0f9fdece77 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/libcifpp-dev/DEBIAN/control chmod 0644 -- debian/.debhelper/libcifpp1/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcifpp1 -ldebian/changelog -Tdebian/libcifpp1.substvars -Pdebian/libcifpp1 chmod 0644 -- debian/libcifpp1/DEBIAN/control dh_md5sums cd debian/libcifpp-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libcifpp1 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcifpp-dev/DEBIAN/md5sums chmod 0644 -- debian/libcifpp1/DEBIAN/md5sums cd debian/.debhelper/libcifpp1/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcifpp1/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/libcifpp-dev .. dpkg-deb --root-owner-group --build debian/libcifpp1 .. dpkg-deb --root-owner-group --build debian/.debhelper/libcifpp1/dbgsym-root .. dpkg-deb: building package 'libcifpp-dev' in '../libcifpp-dev_1.0.1-3_armhf.deb'. dpkg-deb: building package 'libcifpp1-dbgsym' in '../libcifpp1-dbgsym_1.0.1-3_armhf.deb'. dpkg-deb: building package 'libcifpp1' in '../libcifpp1_1.0.1-3_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libcifpp_1.0.1-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/28221 and its subdirectories I: Current time: Fri Jul 16 19:19:00 -12 2021 I: pbuilder-time-stamp: 1626506340 Sat Jul 17 07:19:33 UTC 2021 I: 1st build successful. Starting 2nd build on remote node virt32a-armhf-rb.debian.net. Sat Jul 17 07:19:33 UTC 2021 I: Preparing to do remote build '2' on virt32a-armhf-rb.debian.net. Sat Jul 17 07:44:23 UTC 2021 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. Sat Jul 17 07:44:26 UTC 2021 I: libcifpp_1.0.1-3_armhf.changes: Format: 1.8 Date: Mon, 04 Jan 2021 08:02:04 +0100 Source: libcifpp Binary: libcifpp-dev libcifpp1 libcifpp1-dbgsym Architecture: armhf Version: 1.0.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Maarten L. Hekkelman Description: libcifpp-dev - Development files for libcifpp libcifpp1 - Library files for libcifpp Closes: 977613 977999 978533 Changes: libcifpp (1.0.1-3) unstable; urgency=medium . * [PATCH] revision.hpp: Patch to use SOURCE_DATE_EPOCH Closes: #977999 * Added French debconf translation (thanks to Jean-Pierre Giraud) Closes: #978533 * Added Dutch debconf translation (thanks to Frans Spiesschaert) Closes: #977613 Checksums-Sha1: b9fe016a9f772a8018b694e4a3212c8791a88942 65120 libcifpp-dev_1.0.1-3_armhf.deb 5de34c47416b94bbc541c2df0b2162a16948a90a 14217244 libcifpp1-dbgsym_1.0.1-3_armhf.deb 7520f3ed2b1d4f0051538d4e1b74cbe4b5243133 1334656 libcifpp1_1.0.1-3_armhf.deb 81ad05e521923ff7d25e6cbc2a8260cbade91024 5697 libcifpp_1.0.1-3_armhf.buildinfo Checksums-Sha256: 2f369b3aeeb00f1a05426f6ac1f88d5a89ffe2fa5ace141fb4d4fdf5c94be28e 65120 libcifpp-dev_1.0.1-3_armhf.deb b7491be18e40dae772ce591fd7695bfe84e363688dc65262e80f9bf6018b5271 14217244 libcifpp1-dbgsym_1.0.1-3_armhf.deb 129e1f9db4ba5d6a3f1d326694336fd2f4bec12eb944ac24c29030cb45692834 1334656 libcifpp1_1.0.1-3_armhf.deb 143314e56eb3b55277a1a95833d8ae69f53243c130176616ff184b4a4e7362df 5697 libcifpp_1.0.1-3_armhf.buildinfo Files: f600b8d1baca07902c3e18c0bf5d908a 65120 libdevel optional libcifpp-dev_1.0.1-3_armhf.deb d489027eabdfae4e9cc3d070bf71c28b 14217244 debug optional libcifpp1-dbgsym_1.0.1-3_armhf.deb 1dba2c06fe6712c38877c3fb3d8bcf8d 1334656 libs optional libcifpp1_1.0.1-3_armhf.deb e93a8423b8608fecfa1cff3f00f2cc9d 5697 libs optional libcifpp_1.0.1-3_armhf.buildinfo Sat Jul 17 07:44:27 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.SPgCmUXfYz/libcifpp_1.0.1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.SPgCmUXfYz/libcifpp_1.0.1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.SPgCmUXfYz/libcifpp_1.0.1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.SPgCmUXfYz/b1/libcifpp_1.0.1-3_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.SPgCmUXfYz/b2/libcifpp_1.0.1-3_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.376s) 0.376s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.153s) 0.153s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sat Jul 17 07:44:29 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Sat Jul 17 07:44:29 UTC 2021 I: libcifpp from bullseye built successfully and reproducibly on armhf. Sat Jul 17 07:44:30 UTC 2021 I: Submitting .buildinfo files to external archives: Sat Jul 17 07:44:30 UTC 2021 I: Submitting 8.0K b1/libcifpp_1.0.1-3_armhf.buildinfo.asc Sat Jul 17 07:44:30 UTC 2021 I: Submitting 8.0K b2/libcifpp_1.0.1-3_armhf.buildinfo.asc Sat Jul 17 07:44:31 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jul 17 07:44:31 UTC 2021 I: Done submitting .buildinfo files. Sat Jul 17 07:44:31 UTC 2021 I: Removing signed libcifpp_1.0.1-3_armhf.buildinfo.asc files: removed './b1/libcifpp_1.0.1-3_armhf.buildinfo.asc' removed './b2/libcifpp_1.0.1-3_armhf.buildinfo.asc'