Thu Jun 17 03:25:38 UTC 2021 I: starting to build python-pyani/bullseye/i386 on jenkins on '2021-06-17 03:25' Thu Jun 17 03:25:38 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_15/13764/console.log Thu Jun 17 03:25:38 UTC 2021 I: Downloading source for bullseye/python-pyani=0.2.10-2 --2021-06-17 03:25:38-- http://cdn-fastly.deb.debian.org/debian/pool/main/p/python-pyani/python-pyani_0.2.10-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2334 (2.3K) Saving to: ‘python-pyani_0.2.10-2.dsc’ 0K .. 100% 25.1M=0s 2021-06-17 03:25:38 (25.1 MB/s) - ‘python-pyani_0.2.10-2.dsc’ saved [2334/2334] Thu Jun 17 03:25:38 UTC 2021 I: python-pyani_0.2.10-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-pyani Binary: python3-pyani Architecture: any Version: 0.2.10-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/widdowquinn/pyani Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/python-pyani Vcs-Git: https://salsa.debian.org/med-team/python-pyani.git Testsuite: autopkgtest, autopkgtest-pkg-python Testsuite-Triggers: python3-nose Build-Depends: debhelper-compat (= 12), dh-python, python3-all-dev, python3-setuptools, python3-biopython , python3-matplotlib , python3-pandas , python3-scipy , python3-seaborn , mummer , ncbi-blast+ , python3-nose Package-List: python3-pyani deb python optional arch=any Checksums-Sha1: c8e02f38e2fd58c11d6cd5552185919c5b6aed86 49038850 python-pyani_0.2.10.orig.tar.gz c516f4938931bad9dff865166e397a98aea5f238 5160 python-pyani_0.2.10-2.debian.tar.xz Checksums-Sha256: 8f09fd326aa95081003868009be177a801a41e934a81a4f9261ce5014a4cebf8 49038850 python-pyani_0.2.10.orig.tar.gz 0a9cec347e1d72183b76a981a1ff19aaccd7a20a30a816dcbcac39bb0416c35c 5160 python-pyani_0.2.10-2.debian.tar.xz Files: 2b3e6933c09ccc66485ed5e6982d505d 49038850 python-pyani_0.2.10.orig.tar.gz 6544bd285cbe9464c99a3fbb9c8153b3 5160 python-pyani_0.2.10-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl51NTcRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFKOA/+J+x1LSV86G6+a4NetF/aQdpsLhzXtGIr gXqcpyJWuA13Ux2+CR+jtpo6P+nsgi2WucBiJgTlWlbLKqp3GGlUdLzDNnGYNA0P NeBNP0yAiwme0h9zHU1faQtFR2SzRGrEo0tBk4b0Tydlg2aTSeLJvTdrM0ovAiqL 1emC45fyJquAva3N/xHqTGvJPsMYgZJGm2Rq9zzjQmfTQ7E42BcIu5aAKC4vbB1q K+QKZ+edJqiwRVOwVRxsOfZHvy7gd2TQHAseJ7saShb44TtkmlJdnlDcQP4an+1/ d9OfqDPCXGAtVazJ+Ulq8SGrWB8w1ok58etLH4eeapSag8KD9Fac4nEAgSIn8EKh 2MGTF9MyJ0jVUd/iVMhpq10P9uwlr7mW9zqx+1TGX1X7OU3qnSXMVHLBpLfKm8IU dIYWgRlxI2r4giQpPgJVRNfmQg+oB14KoflFldCf9Ccb4fwfiJyPHpC0WCzN+Nrq JfJokpO1cJdb3SE+nGXVAd1kUB3+JZT7tuhZPmFlyCilNJPCDAx17KsPy1E2OH5T SrT0fWq0t5GwFAaX05q1BvlKQz+b3iEj1fNrGFik8rvPiwhZZeoolBYOAfBcdg6E UtqrA9R8AdJosBdRWQaQ0aE/y9Esh7DHWmpxVbC4ZAR0ndxH6X26q1jnTBWfB6Cz s3IKll/VgLg= =tM8K -----END PGP SIGNATURE----- Thu Jun 17 03:25:38 UTC 2021 I: Checking whether the package is not for us Thu Jun 17 03:25:38 UTC 2021 I: Starting 1st build on remote node ionos12-i386.debian.net. Thu Jun 17 03:25:38 UTC 2021 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Thu Jun 17 03:44:37 UTC 2021 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Jun 16 15:26:04 -12 2021 I: pbuilder-time-stamp: 1623900364 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-pyani_0.2.10-2.dsc] I: copying [./python-pyani_0.2.10.orig.tar.gz] I: copying [./python-pyani_0.2.10-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.i6uWaqpM/trustedkeys.kbx': General error gpgv: Signature made Fri Mar 20 09:27:19 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-pyani_0.2.10-2.dsc dpkg-source: info: extracting python-pyani in python-pyani-0.2.10 dpkg-source: info: unpacking python-pyani_0.2.10.orig.tar.gz dpkg-source: info: unpacking python-pyani_0.2.10-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3586/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=10' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='276dc4ebc1cb4afeae0fc92ba13506f9' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3586' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.CwtqPXxFvS/pbuilderrc_707z --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.CwtqPXxFvS/b1 --logfile b1/build.log python-pyani_0.2.10-2.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos12-i386 4.19.0-16-686-pae #1 SMP Debian 4.19.181-1 (2021-03-19) i686 GNU/Linux I: ls -l /bin total 5784 -rwxr-xr-x 1 root root 1367848 Feb 24 08:57 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 7 02:38 more -rwsr-xr-x 1 root root 50720 Feb 7 02:38 mount -rwxr-xr-x 1 root root 13856 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Feb 24 08:57 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jun 15 21:27 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Feb 7 02:38 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 21:55 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 7 02:38 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/3586/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-python, python3-all-dev, python3-setuptools, python3-biopython, python3-matplotlib, python3-pandas, python3-scipy, python3-seaborn, mummer, ncbi-blast+, python3-nose dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on mummer; however: Package mummer is not installed. pbuilder-satisfydepends-dummy depends on ncbi-blast+; however: Package ncbi-blast+ is not installed. pbuilder-satisfydepends-dummy depends on python3-nose; however: Package python3-nose is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-lyx{a} gawk{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran5{a} libicu67{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblmdb0{a} libmagic-mgc{a} libmagic1{a} libmbedcrypto3{a} libmbedtls12{a} libmbedx509-0{a} libmd0{a} libmpdec3{a} libpipeline1{a} libpng16-16{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtcl8.6{a} libtiff5{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp6{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxss1{a} m4{a} mailcap{a} man-db{a} media-types{a} mime-support{a} mummer{a} ncbi-blast+{a} ncbi-data{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-biopython{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-kiwisolver{a} python3-lib2to3{a} python3-matplotlib{a} python3-minimal{a} python3-nose{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pkg-resources{a} python3-pyparsing{a} python3-reportlab{a} python3-reportlab-accel{a} python3-scipy{a} python3-seaborn{a} python3-setuptools{a} python3-six{a} python3-tk{a} python3-tz{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} ttf-bitstream-vera{a} ucf{a} x11-common{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python-biopython-doc python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-numexpr python3-odf python3-olefile python3-openpyxl python3-patsy python3-renderpm python3-tables python3-xlwt wget 0 packages upgraded, 129 newly installed, 0 to remove and 0 not upgraded. Need to get 92.7 MB of archives. After unpacking 379 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 gawk i386 1:5.1.0-1 [618 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 mailcap all 3.69 [31.7 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 mime-support all 3.66 [10.9 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 ucf all 3.0043 [74.0 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 libtcl8.6 i386 8.6.11+dfsg-1 [1082 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 libpng16-16 i386 1.6.37-3 [303 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libfreetype6 i386 2.10.4+dfsg-1 [429 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 ttf-bitstream-vera all 1.10-8.1 [223 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 libfontconfig1 i386 2.13.1-4.2 [358 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 libmd0 i386 1.0.3-3 [28.9 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 libbsd0 i386 0.11.3-1 [111 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 libxcb1 i386 1.14-3 [144 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 libx11-data all 2:1.7.1-1 [310 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 libx11-6 i386 2:1.7.1-1 [796 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 libxrender1 i386 1:0.9.10-1 [34.1 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 libxft2 i386 2.3.2-2 [58.2 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 libxext6 i386 2:1.3.3-1.1 [55.2 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 x11-common all 1:7.7+22 [252 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 libtk8.6 i386 8.6.11-2 [825 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 tk8.6-blt2.5 i386 2.5.3+dfsg-4.1 [622 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 blt i386 2.5.3+dfsg-4.1 [14.9 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 57 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 58 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 59 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 60 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 61 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 62 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 63 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 64 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-6 [8776 kB] Get: 65 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 66 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 67 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 68 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 69 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 70 http://deb.debian.org/debian bullseye/main i386 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 71 http://deb.debian.org/debian bullseye/main i386 python3-distutils all 3.9.2-1 [143 kB] Get: 72 http://deb.debian.org/debian bullseye/main i386 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 73 http://deb.debian.org/debian bullseye/main i386 fonts-lyx all 2.3.6-1 [205 kB] Get: 74 http://deb.debian.org/debian bullseye/main i386 libblas3 i386 3.9.0-3 [147 kB] Get: 75 http://deb.debian.org/debian bullseye/main i386 libdeflate0 i386 1.7-1 [48.4 kB] Get: 76 http://deb.debian.org/debian bullseye/main i386 libexpat1-dev i386 2.2.10-2 [147 kB] Get: 77 http://deb.debian.org/debian bullseye/main i386 libgfortran5 i386 10.2.1-6 [643 kB] Get: 78 http://deb.debian.org/debian bullseye/main i386 libimagequant0 i386 2.12.2-1.1 [32.4 kB] Get: 79 http://deb.debian.org/debian bullseye/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 80 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB] Get: 81 http://deb.debian.org/debian bullseye/main i386 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 82 http://deb.debian.org/debian bullseye/main i386 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 83 http://deb.debian.org/debian bullseye/main i386 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 84 http://deb.debian.org/debian bullseye/main i386 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 85 http://deb.debian.org/debian bullseye/main i386 liblapack3 i386 3.9.0-3 [1960 kB] Get: 86 http://deb.debian.org/debian bullseye/main i386 liblbfgsb0 i386 3.0+dfsg.3-9 [28.4 kB] Get: 87 http://deb.debian.org/debian bullseye/main i386 liblcms2-2 i386 2.12~rc1-2 [161 kB] Get: 88 http://deb.debian.org/debian bullseye/main i386 liblmdb0 i386 0.9.24-1 [46.7 kB] Get: 89 http://deb.debian.org/debian bullseye/main i386 libmbedcrypto3 i386 2.16.9-0.1 [234 kB] Get: 90 http://deb.debian.org/debian bullseye/main i386 libmbedx509-0 i386 2.16.9-0.1 [110 kB] Get: 91 http://deb.debian.org/debian bullseye/main i386 libmbedtls12 i386 2.16.9-0.1 [143 kB] Get: 92 http://deb.debian.org/debian bullseye/main i386 libpython3.9 i386 3.9.2-1 [1715 kB] Get: 93 http://deb.debian.org/debian bullseye/main i386 libpython3.9-dev i386 3.9.2-1 [3822 kB] Get: 94 http://deb.debian.org/debian bullseye/main i386 libpython3-dev i386 3.9.2-3 [21.7 kB] Get: 95 http://deb.debian.org/debian bullseye/main i386 libpython3-all-dev i386 3.9.2-3 [1068 B] Get: 96 http://deb.debian.org/debian bullseye/main i386 libwebp6 i386 0.6.1-2.1 [269 kB] Get: 97 http://deb.debian.org/debian bullseye/main i386 libtiff5 i386 4.2.0-1 [305 kB] Get: 98 http://deb.debian.org/debian bullseye/main i386 libwebpdemux2 i386 0.6.1-2.1 [88.2 kB] Get: 99 http://deb.debian.org/debian bullseye/main i386 libwebpmux3 i386 0.6.1-2.1 [99.0 kB] Get: 100 http://deb.debian.org/debian bullseye/main i386 mummer i386 3.23+dfsg-7 [670 kB] Get: 101 http://deb.debian.org/debian bullseye/main i386 ncbi-data all 6.1.20170106+dfsg1-9 [3556 kB] Get: 102 http://deb.debian.org/debian bullseye/main i386 ncbi-blast+ i386 2.11.0+ds-1 [12.2 MB] Get: 103 http://deb.debian.org/debian bullseye/main i386 python-matplotlib-data all 3.3.4-1 [4153 kB] Get: 104 http://deb.debian.org/debian bullseye/main i386 python3-all i386 3.9.2-3 [1060 B] Get: 105 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] Get: 106 http://deb.debian.org/debian bullseye/main i386 python3.9-dev i386 3.9.2-1 [515 kB] Get: 107 http://deb.debian.org/debian bullseye/main i386 python3-dev i386 3.9.2-3 [24.8 kB] Get: 108 http://deb.debian.org/debian bullseye/main i386 python3-all-dev i386 3.9.2-3 [1068 B] Get: 109 http://deb.debian.org/debian bullseye/main i386 python3-pkg-resources all 52.0.0-3 [189 kB] Get: 110 http://deb.debian.org/debian bullseye/main i386 python3-numpy i386 1:1.19.5-1 [3600 kB] Get: 111 http://deb.debian.org/debian bullseye/main i386 python3-reportlab-accel i386 3.5.59-1 [39.9 kB] Get: 112 http://deb.debian.org/debian bullseye/main i386 python3-pil i386 8.1.2+dfsg-0.1 [444 kB] Get: 113 http://deb.debian.org/debian bullseye/main i386 python3-reportlab all 3.5.59-1 [575 kB] Get: 114 http://deb.debian.org/debian bullseye/main i386 python3-biopython i386 1.78+dfsg-4 [1401 kB] Get: 115 http://deb.debian.org/debian bullseye/main i386 python3-six all 1.16.0-1 [17.1 kB] Get: 116 http://deb.debian.org/debian bullseye/main i386 python3-cycler all 0.10.0-3 [8084 B] Get: 117 http://deb.debian.org/debian bullseye/main i386 python3-dateutil all 2.8.1-5 [81.7 kB] Get: 118 http://deb.debian.org/debian bullseye/main i386 python3-decorator all 4.4.2-2 [15.8 kB] Get: 119 http://deb.debian.org/debian bullseye/main i386 python3-kiwisolver i386 1.3.1-1+b1 [58.5 kB] Get: 120 http://deb.debian.org/debian bullseye/main i386 python3-pyparsing all 2.4.7-1 [109 kB] Get: 121 http://deb.debian.org/debian bullseye/main i386 python3-matplotlib i386 3.3.4-1 [4165 kB] Get: 122 http://deb.debian.org/debian bullseye/main i386 python3-nose all 1.3.7-7 [133 kB] Get: 123 http://deb.debian.org/debian bullseye/main i386 python3-tz all 2021.1-1 [34.8 kB] Get: 124 http://deb.debian.org/debian bullseye/main i386 python3-pandas-lib i386 1.1.5+dfsg-2 [3182 kB] Get: 125 http://deb.debian.org/debian bullseye/main i386 python3-pandas all 1.1.5+dfsg-2 [2096 kB] Get: 126 http://deb.debian.org/debian bullseye/main i386 python3-scipy i386 1.6.0-2 [11.9 MB] Get: 127 http://deb.debian.org/debian bullseye/main i386 python3-tk i386 3.9.2-1 [101 kB] Get: 128 http://deb.debian.org/debian bullseye/main i386 python3-seaborn all 0.11.1-1 [206 kB] Get: 129 http://deb.debian.org/debian bullseye/main i386 python3-setuptools all 52.0.0-3 [441 kB] Fetched 92.7 MB in 35s (2672 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../1-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_i386.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../3-libpipeline1_1.5.3-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_i386.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:i386. Preparing to unpack .../6-libreadline8_8.1-1_i386.deb ... Unpacking libreadline8:i386 (8.1-1) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../7-libsigsegv2_2.13-1_i386.deb ... Unpacking libsigsegv2:i386 (2.13-1) ... Setting up readline-common (8.1-1) ... Setting up libreadline8:i386 (8.1-1) ... Setting up libsigsegv2:i386 (2.13-1) ... Selecting previously unselected package gawk. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20281 files and directories currently installed.) Preparing to unpack .../gawk_1%3a5.1.0-1_i386.deb ... Unpacking gawk (1:5.1.0-1) ... Selecting previously unselected package libpython3.9-minimal:i386. Preparing to unpack .../libpython3.9-minimal_3.9.2-1_i386.deb ... Unpacking libpython3.9-minimal:i386 (3.9.2-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.2.10-2_i386.deb ... Unpacking libexpat1:i386 (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../python3.9-minimal_3.9.2-1_i386.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:i386 (3.9.2-1) ... Setting up libexpat1:i386 (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20750 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_i386.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../2-mailcap_3.69_all.deb ... Unpacking mailcap (3.69) ... Selecting previously unselected package mime-support. Preparing to unpack .../3-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package libmpdec3:i386. Preparing to unpack .../4-libmpdec3_2.5.1-1_i386.deb ... Unpacking libmpdec3:i386 (2.5.1-1) ... Selecting previously unselected package libpython3.9-stdlib:i386. Preparing to unpack .../5-libpython3.9-stdlib_3.9.2-1_i386.deb ... Unpacking libpython3.9-stdlib:i386 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../6-python3.9_3.9.2-1_i386.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../7-libpython3-stdlib_3.9.2-3_i386.deb ... Unpacking libpython3-stdlib:i386 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21171 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_i386.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.39-3_i386.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../003-libmagic1_1%3a5.39-3_i386.deb ... Unpacking libmagic1:i386 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.39-3_i386.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-4_i386.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../006-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package m4. Preparing to unpack .../007-m4_1.4.18-5_i386.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../008-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../009-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../010-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../011-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libtcl8.6:i386. Preparing to unpack .../012-libtcl8.6_8.6.11+dfsg-1_i386.deb ... Unpacking libtcl8.6:i386 (8.6.11+dfsg-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../013-libbrotli1_1.0.9-2+b2_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b2) ... Selecting previously unselected package libpng16-16:i386. Preparing to unpack .../014-libpng16-16_1.6.37-3_i386.deb ... Unpacking libpng16-16:i386 (1.6.37-3) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../015-libfreetype6_2.10.4+dfsg-1_i386.deb ... Unpacking libfreetype6:i386 (2.10.4+dfsg-1) ... Selecting previously unselected package ttf-bitstream-vera. Preparing to unpack .../016-ttf-bitstream-vera_1.10-8.1_all.deb ... Unpacking ttf-bitstream-vera (1.10-8.1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../017-fontconfig-config_2.13.1-4.2_all.deb ... Unpacking fontconfig-config (2.13.1-4.2) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../018-libfontconfig1_2.13.1-4.2_i386.deb ... Unpacking libfontconfig1:i386 (2.13.1-4.2) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../019-libxau6_1%3a1.0.9-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.9-1) ... Selecting previously unselected package libmd0:i386. Preparing to unpack .../020-libmd0_1.0.3-3_i386.deb ... Unpacking libmd0:i386 (1.0.3-3) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../021-libbsd0_0.11.3-1_i386.deb ... Unpacking libbsd0:i386 (0.11.3-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../022-libxdmcp6_1%3a1.1.2-3_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../023-libxcb1_1.14-3_i386.deb ... Unpacking libxcb1:i386 (1.14-3) ... Selecting previously unselected package libx11-data. Preparing to unpack .../024-libx11-data_2%3a1.7.1-1_all.deb ... Unpacking libx11-data (2:1.7.1-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../025-libx11-6_2%3a1.7.1-1_i386.deb ... Unpacking libx11-6:i386 (2:1.7.1-1) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../026-libxrender1_1%3a0.9.10-1_i386.deb ... Unpacking libxrender1:i386 (1:0.9.10-1) ... Selecting previously unselected package libxft2:i386. Preparing to unpack .../027-libxft2_2.3.2-2_i386.deb ... Unpacking libxft2:i386 (2.3.2-2) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../028-libxext6_2%3a1.3.3-1.1_i386.deb ... Unpacking libxext6:i386 (2:1.3.3-1.1) ... Selecting previously unselected package x11-common. Preparing to unpack .../029-x11-common_1%3a7.7+22_all.deb ... Unpacking x11-common (1:7.7+22) ... Selecting previously unselected package libxss1:i386. Preparing to unpack .../030-libxss1_1%3a1.2.3-1_i386.deb ... Unpacking libxss1:i386 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:i386. Preparing to unpack .../031-libtk8.6_8.6.11-2_i386.deb ... Unpacking libtk8.6:i386 (8.6.11-2) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../032-tk8.6-blt2.5_2.5.3+dfsg-4.1_i386.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Selecting previously unselected package blt. Preparing to unpack .../033-blt_2.5.3+dfsg-4.1_i386.deb ... Unpacking blt (2.5.3+dfsg-4.1) ... Selecting previously unselected package libdebhelper-perl. 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Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:i386 (67.1-6) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up gawk (1:5.1.0-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up fonts-lyx (2.3.6-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:i386 (1.0.9-2+b2) ... Setting up x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libmagic1:i386 (1:5.39-3) ... Setting up libdeflate0:i386 (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up m4 (1.4.18-5) ... Setting up file (1:5.39-3) ... Setting up libjbig0:i386 (2.1-3.1+b2) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:i386 (3.9.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libexpat1-dev:i386 (2.2.10-2) ... Setting up libjpeg62-turbo:i386 (1:2.0.6-4) ... Setting up libx11-data (2:1.7.1-1) ... Setting up libimagequant0:i386 (2.12.2-1.1) ... Setting up libpng16-16:i386 (1.6.37-3) ... Setting up libtcl8.6:i386 (8.6.11+dfsg-1) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:i386 (0.6.1-2.1) ... Setting up libgfortran5:i386 (10.2.1-6) ... Setting up autoconf (2.69-14) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-2) ... Setting up libmd0:i386 (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libmpdec3:i386 (2.5.1-1) ... Setting up mummer (3.23+dfsg-7) ... Setting up libmbedcrypto3:i386 (2.16.9-0.1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libtiff5:i386 (4.2.0-1) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up python-matplotlib-data (3.3.4-1) ... Setting up libwebpmux3:i386 (0.6.1-2.1) ... Setting up libbsd0:i386 (0.11.3-1) ... Setting up mailcap (3.69) ... Setting up libelf1:i386 (0.183-1) ... Setting up libxml2:i386 (2.9.10+dfsg-6.7) ... Setting up libpython3.9-stdlib:i386 (3.9.2-1) ... Setting up libpython3-stdlib:i386 (3.9.2-3) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up libxdmcp6:i386 (1:1.1.2-3) ... Setting up liblapack3:i386 (3.9.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libxcb1:i386 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up mime-support (3.66) ... Setting up libtool (2.4.6-15) ... Setting up libmbedx509-0:i386 (2.16.9-0.1) ... Setting up libwebpdemux2:i386 (0.6.1-2.1) ... Setting up libmbedtls12:i386 (2.16.9-0.1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libpython3.9:i386 (3.9.2-1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libfreetype6:i386 (2.10.4+dfsg-1) ... Setting up ucf (3.0043) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libx11-6:i386 (2:1.7.1-1) ... Setting up python3.9 (3.9.2-1) ... Setting up liblbfgsb0:i386 (3.0+dfsg.3-9) ... Setting up libxrender1:i386 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:i386 (2:1.3.3-1.1) ... Setting up libpython3.9-dev:i386 (3.9.2-1) ... Setting up python3 (3.9.2-3) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-tz (2021.1-1) ... Setting up ncbi-blast+ (2.11.0+ds-1) ... Setting up python3-six (1.16.0-1) ... Setting up python3-pil:i386 (8.1.2+dfsg-0.1) ... Setting up python3-decorator (4.4.2-2) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up python3-cycler (0.10.0-3) ... Setting up python3-reportlab-accel:i386 (3.5.59-1) ... Setting up python3-kiwisolver (1.3.1-1+b1) ... Setting up python3-reportlab (3.5.59-1) ... Setting up python3.9-dev (3.9.2-1) ... Setting up python3-dateutil (2.8.1-5) ... Setting up libxss1:i386 (1:1.2.3-1) ... Setting up libfontconfig1:i386 (2.13.1-4.2) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-pkg-resources (52.0.0-3) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up libxft2:i386 (2.3.2-2) ... Setting up libpython3-dev:i386 (3.9.2-3) ... Setting up python3-setuptools (52.0.0-3) ... Setting up libtk8.6:i386 (8.6.11-2) ... Setting up python3-all (3.9.2-3) ... Setting up debhelper (13.3.4) ... Setting up python3-nose (1.3.7-7) ... Setting up libpython3-all-dev:i386 (3.9.2-3) ... Setting up python3-dev (3.9.2-3) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-biopython (1.78+dfsg-4) ... Setting up python3-all-dev (3.9.2-3) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Setting up python3-matplotlib (3.3.4-1) ... Setting up python3-scipy (1.6.0-2) ... Setting up blt (2.5.3+dfsg-4.1) ... Setting up python3-pandas-lib:i386 (1.1.5+dfsg-2) ... Setting up python3-tk:i386 (3.9.2-1) ... Setting up python3-pandas (1.1.5+dfsg-2) ... Setting up python3-seaborn (0.11.1-1) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/python-pyani-0.2.10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package python-pyani dpkg-buildpackage: info: source version 0.2.10-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sao I Kuan dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/python-pyani-0.2.10' dh_auto_clean I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -f pyani.egg-info/PKG-INFO pyani.egg-info/SOURCES.txt pyani.egg-info/dependency_links.txt pyani.egg-info/requires.txt pyani.egg-info/top_level.txt make[1]: Leaving directory '/build/python-pyani-0.2.10' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/anim.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/pyani_graphics.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/run_sge.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/run_multiprocessing.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/tetra.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/pyani_files.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/pyani_jobs.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/anib.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/pyani_tools.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/__init__.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani copying pyani/pyani_config.py -> /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani running egg_info creating pyani.egg-info writing pyani.egg-info/PKG-INFO writing dependency_links to pyani.egg-info/dependency_links.txt writing requirements to pyani.egg-info/requires.txt writing top-level names to pyani.egg-info/top_level.txt writing manifest file 'pyani.egg-info/SOURCES.txt' reading manifest file 'pyani.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyani.egg-info/SOURCES.txt' running build_scripts creating build creating build/scripts-3.9 copying and adjusting bin/average_nucleotide_identity.py -> build/scripts-3.9 copying and adjusting bin/genbank_get_genomes_by_taxon.py -> build/scripts-3.9 copying and adjusting bin/delta_filter_wrapper.py -> build/scripts-3.9 changing mode of build/scripts-3.9/average_nucleotide_identity.py from 644 to 755 changing mode of build/scripts-3.9/genbank_get_genomes_by_taxon.py from 644 to 755 changing mode of build/scripts-3.9/delta_filter_wrapper.py from 644 to 755 dh_auto_test -O--buildsystem=pybuild I: pybuild base:232: cd /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build; python3.9 -m nose -v tests /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/tests/test_anib.py:59: FutureWarning: pandas.util.testing is deprecated. Use the functions in the public API at pandas.testing instead. from pandas.util.testing import assert_frame_equal generate BLAST+ db commands. ... ok generate BLASTN+ commands. ... ok generate dictionary of BLASTN+ database jobs. ... ok generate BLASTN+ command-line. ... ok create jobgraph for BLASTN+ jobs. ... ok generate makeblastdb command-line. ... ok fragment files for ANIb/ANIblastall. ... ok parses directory of .blast_tab output. ... ok parses NUCmer .delta/.filter file. ... ok processes directory of .delta files into ANIResults. ... ok generate NUCmer command line with maxmatch. ... ok generate multiple abstract NUCmer/delta-filter command-lines. ... ok generate dependency tree of NUCmer/delta-filter jobs. ... ok generate single abstract NUCmer/delta-filter command-line. ... ok ANIb results concordant with JSpecies. ... ok ANIm results concordant with JSpecies. ... ok TETRA results concordant with JSpecies. ... ok Test Biopython import. ... ok Test matplotlib import. ... ok Test numpy import. ... ok Test pandas import. ... ok Test scipy import. ... ok Test that BLAST+ is runnable. ... ok Test that NUCmer is runnable. ... ok Write .png graphics with mpl ... ok Write .svg graphics with mpl ... ok Write .pdf graphics with mpl ... ok Write .png graphics with seaborn ... ok Write .svg graphics with seaborn ... ok Write .pdf graphics with seaborn ... ok create dummy job with dependency. ... ok create a dummy job. ... ok create dummy job with command. ... ok create dummy job, add and remove dependency. ... ok create dummy 1-parameter sweep jobgroup. ... ok create dummy 2-parameter sweep jobgroup. ... ok add jobgroup dependency. ... ok create dummy jobgroup. ... ok add and remove jobgroup dependency. ... ok module builds command sets. ... ok module runs dependency graph. ... ok multiprocessing() runs basic jobs. ... ok Test parsing of NUCmer delta file. ... ok TETRA correlation calculated correctly. ... ok detects unambiguous IUPAC symbols correctly. ... ok TETRA Z-score calculated correctly. ... ok ---------------------------------------------------------------------- Ran 46 tests in 581.951s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/python-pyani-0.2.10/debian/python3-pyani running install running build running build_py running egg_info writing pyani.egg-info/PKG-INFO writing dependency_links to pyani.egg-info/dependency_links.txt writing requirements to pyani.egg-info/requires.txt writing top-level names to pyani.egg-info/top_level.txt reading manifest file 'pyani.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyani.egg-info/SOURCES.txt' running build_scripts running install_lib creating /build/python-pyani-0.2.10/debian/python3-pyani/usr creating /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib creating /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9 creating /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages creating /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/anim.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/pyani_graphics.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/run_sge.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/run_multiprocessing.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/tetra.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/pyani_files.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/pyani_jobs.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/anib.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/pyani_tools.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__init__.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani creating /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/pyani_config.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/pyani_files.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/pyani_tools.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/anim.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/anib.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/run_multiprocessing.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/pyani_graphics.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/__init__.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/tetra.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/__pycache__/pyani_jobs.cpython-39.pyc -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__pycache__ copying /build/python-pyani-0.2.10/.pybuild/cpython3_3.9_pyani/build/pyani/pyani_config.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/anim.py to anim.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/pyani_graphics.py to pyani_graphics.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/run_sge.py to run_sge.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/run_multiprocessing.py to run_multiprocessing.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/tetra.py to tetra.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/pyani_files.py to pyani_files.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/pyani_jobs.py to pyani_jobs.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/anib.py to anib.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/pyani_tools.py to pyani_tools.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani/pyani_config.py to pyani_config.cpython-39.pyc running install_egg_info Copying pyani.egg-info to /build/python-pyani-0.2.10/debian/python3-pyani/usr/lib/python3.9/dist-packages/pyani-0.2.10.egg-info Skipping SOURCES.txt running install_scripts creating /build/python-pyani-0.2.10/debian/python3-pyani/usr/bin copying build/scripts-3.9/genbank_get_genomes_by_taxon.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/bin copying build/scripts-3.9/average_nucleotide_identity.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/bin copying build/scripts-3.9/delta_filter_wrapper.py -> /build/python-pyani-0.2.10/debian/python3-pyani/usr/bin changing mode of /build/python-pyani-0.2.10/debian/python3-pyani/usr/bin/genbank_get_genomes_by_taxon.py to 755 changing mode of /build/python-pyani-0.2.10/debian/python3-pyani/usr/bin/average_nucleotide_identity.py to 755 changing mode of /build/python-pyani-0.2.10/debian/python3-pyani/usr/bin/delta_filter_wrapper.py to 755 dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/python-pyani-0.2.10' dh_installman --language=C make[1]: Leaving directory '/build/python-pyani-0.2.10' dh_python3 -O--buildsystem=pybuild dh_installinit -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -O--buildsystem=pybuild dh_strip -O--buildsystem=pybuild dh_makeshlibs -O--buildsystem=pybuild dh_shlibdeps -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-pyani' in '../python3-pyani_0.2.10-2_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-pyani_0.2.10-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3586 and its subdirectories I: Current time: Wed Jun 16 15:44:36 -12 2021 I: pbuilder-time-stamp: 1623901476 Thu Jun 17 03:44:37 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Thu Jun 17 03:44:37 UTC 2021 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Thu Jun 17 03:48:12 UTC 2021 I: Deleting $TMPDIR on ionos16-i386.debian.net. Thu Jun 17 03:48:12 UTC 2021 I: python-pyani_0.2.10-2_i386.changes: Format: 1.8 Date: Fri, 20 Mar 2020 17:21:22 +0900 Source: python-pyani Binary: python3-pyani Architecture: i386 Version: 0.2.10-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sao I Kuan Description: python3-pyani - Python3 module for average nucleotide identity analyses Changes: python-pyani (0.2.10-2) unstable; urgency=medium . * Team upload. . [ Sao I Kuan ] * Add Testsuite: autopkgtest-pkg-python * Add test script for autopkgtest . [ Andreas Tille ] * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Trim trailing whitespace. Checksums-Sha1: 949c4d6c3b6b8db582f5ec3759424de509ac2de2 7530 python-pyani_0.2.10-2_i386.buildinfo 6dbb4414b4a0c85d972a74f7e913baea5eca523d 46680 python3-pyani_0.2.10-2_i386.deb Checksums-Sha256: 29383b0d6b981fbb8edf7d9916a8ffc67bb4670d1d6a8627c769e2c0d8b02393 7530 python-pyani_0.2.10-2_i386.buildinfo 211bae473f627cecef6e1f20f74dda563362ad2b036ec26bd1ad06b1bd220333 46680 python3-pyani_0.2.10-2_i386.deb Files: 96b94130c269eab016ee286b1d3a8f73 7530 science optional python-pyani_0.2.10-2_i386.buildinfo 061d1df99cad22194a8b39dc33bbd697 46680 python optional python3-pyani_0.2.10-2_i386.deb Thu Jun 17 03:48:13 UTC 2021 I: diffoscope 172 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.CwtqPXxFvS/python-pyani_0.2.10-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.CwtqPXxFvS/python-pyani_0.2.10-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.CwtqPXxFvS/python-pyani_0.2.10-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.CwtqPXxFvS/b1/python-pyani_0.2.10-2_i386.changes /srv/reproducible-results/rbuild-debian/tmp.CwtqPXxFvS/b2/python-pyani_0.2.10-2_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.229s) 0.229s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.014s) 0.014s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu Jun 17 03:48:14 UTC 2021 I: diffoscope 172 found no differences in the changes files, and a .buildinfo file also exists. Thu Jun 17 03:48:14 UTC 2021 I: python-pyani from bullseye built successfully and reproducibly on i386. Thu Jun 17 03:48:15 UTC 2021 I: Submitting .buildinfo files to external archives: Thu Jun 17 03:48:15 UTC 2021 I: Submitting 12K b1/python-pyani_0.2.10-2_i386.buildinfo.asc Thu Jun 17 03:48:17 UTC 2021 I: Submitting 12K b2/python-pyani_0.2.10-2_i386.buildinfo.asc Thu Jun 17 03:48:19 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jun 17 03:48:19 UTC 2021 I: Done submitting .buildinfo files. Thu Jun 17 03:48:19 UTC 2021 I: Removing signed python-pyani_0.2.10-2_i386.buildinfo.asc files: removed './b1/python-pyani_0.2.10-2_i386.buildinfo.asc' removed './b2/python-pyani_0.2.10-2_i386.buildinfo.asc'