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| 4236 | <dd> </dd> | 4236 | <dd> </dd> |
| 4237 | <dt><a·href="jebl/evolution/io/ImportHelper.html#next()"·class="member-name-link">next()</a>·-·Method·in·class·jebl.evolution.io.<a·href="jebl/evolution/io/ImportHelper.html"·title="class·in·jebl.evolution.io">ImportHelper</a></dt> | 4237 | <dt><a·href="jebl/evolution/io/ImportHelper.html#next()"·class="member-name-link">next()</a>·-·Method·in·class·jebl.evolution.io.<a·href="jebl/evolution/io/ImportHelper.html"·title="class·in·jebl.evolution.io">ImportHelper</a></dt> |
| 4238 | <dd> </dd> | 4238 | <dd> </dd> |
| 4239 | <dt><a·href="jebl/evolution/align/Align.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/Align.html"·title="class·in·jebl.evolution.align">Align</a></dt> | 4239 | <dt><a·href="jebl/evolution/align/Align.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/Align.html"·title="class·in·jebl.evolution.align">Align</a></dt> |
| 4240 | <dd> | 4240 | <dd> |
| 4241 | <div·class="block">Get·the·next·state·in·the·traceback</div> | 4241 | <div·class="block">Get·the·next·state·in·the·traceback</div> |
| 4242 | </dd> | 4242 | </dd> |
| 4243 | <dt><a·href="jebl/evolution/align/NeedlemanWunsch | 4243 | <dt><a·href="jebl/evolution/align/NeedlemanWunschAffine.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/NeedlemanWunschAffine.html"·title="class·in·jebl.evolution.align">NeedlemanWunschAffine</a></dt> |
| 4244 | <dd> | 4244 | <dd> |
| 4245 | <div·class="block">Get·the·next·state·in·the·traceback</div> | 4245 | <div·class="block">Get·the·next·state·in·the·traceback</div> |
| 4246 | </dd> | 4246 | </dd> |
| 4247 | <dt><a·href="jebl/evolution/align/NonOverlapMultipleLocalAffine.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/NonOverlapMultipleLocalAffine.html"·title="class·in·jebl.evolution.align">NonOverlapMultipleLocalAffine</a></dt> | 4247 | <dt><a·href="jebl/evolution/align/NonOverlapMultipleLocalAffine.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/NonOverlapMultipleLocalAffine.html"·title="class·in·jebl.evolution.align">NonOverlapMultipleLocalAffine</a></dt> |
| 4248 | <dd> | 4248 | <dd> |
| 4249 | <div·class="block">Get·the·next·state·in·the·traceback</div> | 4249 | <div·class="block">Get·the·next·state·in·the·traceback</div> |
| 4250 | </dd> | 4250 | </dd> |
| 4251 | <dt><a·href="jebl/evolution/align/ | 4251 | <dt><a·href="jebl/evolution/align/OverlapAlign.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/OverlapAlign.html"·title="class·in·jebl.evolution.align">OverlapAlign</a></dt> |
| 4252 | <dd> | 4252 | <dd> |
| 4253 | <div·class="block">Get·the·next·state·in·the·traceback</div> | 4253 | <div·class="block">Get·the·next·state·in·the·traceback</div> |
| 4254 | </dd> | 4254 | </dd> |
| 4255 | <dt><a·href="jebl/evolution/align/MaximalSegmentPair.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/MaximalSegmentPair.html"·title="class·in·jebl.evolution.align">MaximalSegmentPair</a></dt> | 4255 | <dt><a·href="jebl/evolution/align/MaximalSegmentPair.html#next(jebl.evolution.align.Traceback)"·class="member-name-link">next(Traceback)</a>·-·Method·in·class·jebl.evolution.align.<a·href="jebl/evolution/align/MaximalSegmentPair.html"·title="class·in·jebl.evolution.align">MaximalSegmentPair</a></dt> |
| 4256 | <dd> </dd> | 4256 | <dd> </dd> |
| 4257 | <dt><a·href="jebl/math/Random.html#nextBoolean()"·class="member-name-link">nextBoolean()</a>·-·Static·method·in·class·jebl.math.<a·href="jebl/math/Random.html"·title="class·in·jebl.math">Random</a></dt> | 4257 | <dt><a·href="jebl/math/Random.html#nextBoolean()"·class="member-name-link">nextBoolean()</a>·-·Static·method·in·class·jebl.math.<a·href="jebl/math/Random.html"·title="class·in·jebl.math">Random</a></dt> |
| 4258 | <dd> | 4258 | <dd> |
| Offset 3855, 22 lines modified | Offset 3855, 20 lines modified | ||
| 3855 | ··newTraceBack(String,_String)·-·Method·in·interface | 3855 | ··newTraceBack(String,_String)·-·Method·in·interface |
| 3856 | ··jebl.evolution.align.TracebackPlotter | 3856 | ··jebl.evolution.align.TracebackPlotter |
| 3857 | ······ | 3857 | ······ |
| 3858 | ··next()·-·Method·in·class·jebl.evolution.io.ImportHelper | 3858 | ··next()·-·Method·in·class·jebl.evolution.io.ImportHelper |
| 3859 | ······ | 3859 | ······ |
| 3860 | ··next(Traceback)·-·Method·in·class·jebl.evolution.align.Align | 3860 | ··next(Traceback)·-·Method·in·class·jebl.evolution.align.Align |
| 3861 | ······Get·the·next·state·in·the·traceback | 3861 | ······Get·the·next·state·in·the·traceback |
| 3862 | ··next(Traceback)·-·Method·in·class·jebl.evolution.align.NeedlemanWunschAffine | ||
| 3862 | ··next(Traceback)·-·Method·in·class | ||
| 3863 | ··jebl.evolution.align.NeedlemanWunschLinearSpaceAffine | ||
| 3864 | ······Get·the·next·state·in·the·traceback | 3863 | ······Get·the·next·state·in·the·traceback |
| 3865 | ··next(Traceback)·-·Method·in·class | 3864 | ··next(Traceback)·-·Method·in·class |
| 3866 | ··jebl.evolution.align.NonOverlapMultipleLocalAffine | 3865 | ··jebl.evolution.align.NonOverlapMultipleLocalAffine |
| 3867 | ······Get·the·next·state·in·the·traceback | 3866 | ······Get·the·next·state·in·the·traceback |
| 3867 | ··next(Traceback)·-·Method·in·class·jebl.evolution.align.OverlapAlign | ||
| 3868 | ··next(Traceback)·-·Method·in·class | ||
| 3869 | ··jebl.evolution.align.NeedlemanWunschLinearSpace | ||
| 3870 | ······Get·the·next·state·in·the·traceback | 3868 | ······Get·the·next·state·in·the·traceback |
| 3871 | ··next(Traceback)·-·Method·in·class·jebl.evolution.align.MaximalSegmentPair | 3869 | ··next(Traceback)·-·Method·in·class·jebl.evolution.align.MaximalSegmentPair |
| 3872 | ······ | 3870 | ······ |
| 3873 | ··nextBoolean()·-·Static·method·in·class·jebl.math.Random | 3871 | ··nextBoolean()·-·Static·method·in·class·jebl.math.Random |
| 3874 | ······Access·a·default·instance·of·this·class,·access·is·synchronized | 3872 | ······Access·a·default·instance·of·this·class,·access·is·synchronized |
| 3875 | ··nextByte()·-·Static·method·in·class·jebl.math.Random | 3873 | ··nextByte()·-·Static·method·in·class·jebl.math.Random |
| 3876 | ······Access·a·default·instance·of·this·class,·access·is·synchronized | 3874 | ······Access·a·default·instance·of·this·class,·access·is·synchronized |
| Offset 6195, 25 lines modified | Offset 6195, 25 lines modified | ||
| 6195 | },·{ | 6195 | },·{ |
| 6196 | ····"p":·"jebl.evolution.align", | 6196 | ····"p":·"jebl.evolution.align", |
| 6197 | ····"c":·"Align", | 6197 | ····"c":·"Align", |
| 6198 | ····"l":·"next(Traceback)", | 6198 | ····"l":·"next(Traceback)", |
| 6199 | ····"u":·"next(jebl.evolution.align.Traceback)" | 6199 | ····"u":·"next(jebl.evolution.align.Traceback)" |
| 6200 | },·{ | 6200 | },·{ |
| 6201 | ····"p":·"jebl.evolution.align", | 6201 | ····"p":·"jebl.evolution.align", |
| 6202 | ····"c":·"NeedlemanWunsch | 6202 | ····"c":·"NeedlemanWunschAffine", |
| 6203 | ····"l":·"next(Traceback)", | 6203 | ····"l":·"next(Traceback)", |
| 6204 | ····"u":·"next(jebl.evolution.align.Traceback)" | 6204 | ····"u":·"next(jebl.evolution.align.Traceback)" |
| 6205 | },·{ | 6205 | },·{ |
| 6206 | ····"p":·"jebl.evolution.align", | 6206 | ····"p":·"jebl.evolution.align", |
| 6207 | ····"c":·"NonOverlapMultipleLocalAffine", | 6207 | ····"c":·"NonOverlapMultipleLocalAffine", |
| 6208 | ····"l":·"next(Traceback)", | 6208 | ····"l":·"next(Traceback)", |
| 6209 | ····"u":·"next(jebl.evolution.align.Traceback)" | 6209 | ····"u":·"next(jebl.evolution.align.Traceback)" |
| 6210 | },·{ | 6210 | },·{ |
| 6211 | ····"p":·"jebl.evolution.align", | 6211 | ····"p":·"jebl.evolution.align", |
| 6212 | ····"c":·" | 6212 | ····"c":·"OverlapAlign", |
| 6213 | ····"l":·"next(Traceback)", | 6213 | ····"l":·"next(Traceback)", |
| 6214 | ····"u":·"next(jebl.evolution.align.Traceback)" | 6214 | ····"u":·"next(jebl.evolution.align.Traceback)" |
| 6215 | },·{ | 6215 | },·{ |
| 6216 | ····"p":·"jebl.evolution.align", | 6216 | ····"p":·"jebl.evolution.align", |
| 6217 | ····"c":·"MaximalSegmentPair", | 6217 | ····"c":·"MaximalSegmentPair", |
| 6218 | ····"l":·"next(Traceback)", | 6218 | ····"l":·"next(Traceback)", |
| 6219 | ····"u":·"next(jebl.evolution.align.Traceback)" | 6219 | ····"u":·"next(jebl.evolution.align.Traceback)" |