{"diffoscope-json-version": 1, "source1": "/srv/reproducible-results/rbuild-debian/r-b-build.7wsSOcKm/b1/q2cli_2024.2.0-1_amd64.changes", "source2": "/srv/reproducible-results/rbuild-debian/r-b-build.7wsSOcKm/b2/q2cli_2024.2.0-1_amd64.changes", "unified_diff": null, "details": [{"source1": "Files", "source2": "Files", "unified_diff": "@@ -1,2 +1,2 @@\n \n- a047fa54c79d7cd967ceea40add69712 86572 science optional q2cli_2024.2.0-1_all.deb\n+ 7251bddfbe550d6dc05e35a107d7e7b3 86548 science optional q2cli_2024.2.0-1_all.deb\n"}, {"source1": "q2cli_2024.2.0-1_all.deb", "source2": "q2cli_2024.2.0-1_all.deb", "unified_diff": null, "details": [{"source1": "file list", "source2": "file list", "unified_diff": "@@ -1,3 +1,3 @@\n -rw-r--r-- 0 0 0 4 2024-02-18 17:09:55.000000 debian-binary\n -rw-r--r-- 0 0 0 2548 2024-02-18 17:09:55.000000 control.tar.xz\n--rw-r--r-- 0 0 0 83832 2024-02-18 17:09:55.000000 data.tar.xz\n+-rw-r--r-- 0 0 0 83808 2024-02-18 17:09:55.000000 data.tar.xz\n"}, {"source1": "control.tar.xz", "source2": "control.tar.xz", "unified_diff": null, "details": [{"source1": "control.tar", "source2": "control.tar", "unified_diff": null, "details": [{"source1": "./control", "source2": "./control", "unified_diff": "@@ -1,12 +1,12 @@\n Package: q2cli\n Version: 2024.2.0-1\n Architecture: all\n Maintainer: Debian Med Packaging Team \n-Installed-Size: 537\n+Installed-Size: 538\n Depends: python3:any, q2-feature-table (>= 2024.2), qiime (>= 2024.2), python3-setuptools, python3-click\n Section: science\n Priority: optional\n Homepage: https://qiime2.org/\n Description: Click-based command line interface for QIIME 2\n QIIME 2 is a powerful, extensible, and decentralized microbiome analysis\n package with a focus on data and analysis transparency. QIIME 2 enables\n"}, {"source1": "./md5sums", "source2": "./md5sums", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "comments": ["Files differ"], "unified_diff": null}]}]}]}, {"source1": "data.tar.xz", "source2": "data.tar.xz", "unified_diff": null, "details": [{"source1": "data.tar", "source2": "data.tar", "unified_diff": null, "details": [{"source1": "file list", "source2": "file list", "unified_diff": "@@ -48,19 +48,19 @@\n -rw-r--r-- 0 root (0) root (0) 126 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/q2cli-2024.2.0.egg-info/PKG-INFO\n -rw-r--r-- 0 root (0) root (0) 1 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/q2cli-2024.2.0.egg-info/dependency_links.txt\n -rw-r--r-- 0 root (0) root (0) 109 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/q2cli-2024.2.0.egg-info/entry_points.txt\n -rw-r--r-- 0 root (0) root (0) 1 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/q2cli-2024.2.0.egg-info/not-zip-safe\n -rw-r--r-- 0 root (0) root (0) 6 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/q2cli-2024.2.0.egg-info/top_level.txt\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/000/\n--rw-r--r-- 0 root (0) root (0) 50351 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/000/parsl.log\n+-rw-r--r-- 0 root (0) root (0) 50611 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/000/parsl.log\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/001/\n--rw-r--r-- 0 root (0) root (0) 33705 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/001/parsl.log\n+-rw-r--r-- 0 root (0) root (0) 33881 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/001/parsl.log\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/002/\n--rw-r--r-- 0 root (0) root (0) 17059 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/002/parsl.log\n+-rw-r--r-- 0 root (0) root (0) 17145 2024-02-18 17:09:55.000000 ./usr/lib/python3/dist-packages/runinfo/002/parsl.log\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/share/\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/share/bash-completion/\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/share/bash-completion/completions/\n -rw-r--r-- 0 root (0) root (0) 1736 2024-02-18 17:09:55.000000 ./usr/share/bash-completion/completions/qiime\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/share/doc/\n drwxr-xr-x 0 root (0) root (0) 0 2024-02-18 17:09:55.000000 ./usr/share/doc/q2cli/\n -rw-r--r-- 0 root (0) root (0) 1419 2024-02-18 17:09:55.000000 ./usr/share/doc/q2cli/changelog.Debian.gz\n"}, {"source1": "./usr/lib/python3/dist-packages/runinfo/000/parsl.log", "source2": "./usr/lib/python3/dist-packages/runinfo/000/parsl.log", "unified_diff": "@@ -1,8 +1,8 @@\n-1714309740.726468 2024-04-28 01:09:00 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n+1748720244.463789 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n Config(\n app_cache=True, \n checkpoint_files=None, \n checkpoint_mode=None, \n checkpoint_period=None, \n executors=(ThreadPoolExecutor(\n label='default', \n@@ -19,104 +19,104 @@\n retries=0, \n retry_handler=None, \n run_dir='runinfo', \n strategy='none', \n strategy_period=5, \n usage_tracking=False\n )\n-1714309740.726959 2024-04-28 01:09:00 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n-1714309740.727248 2024-04-28 01:09:00 MainProcess-216764 MainThread-139685797294144 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n-1714309740.736181 2024-04-28 01:09:00 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:121 __init__ INFO: Run id is: 4fa645df-8238-49d3-811b-daffde8bebcf\n-1714309741.150917 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309741.155542 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309741.155933 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n-1714309741.156097 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n-1714309741.156563 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n-1714309741.156755 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n-1714309741.175685 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n-1714309741.176159 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309741.381001 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309741.381473 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n-1714309741.381676 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n-1714309741.406476 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor test\n-1714309741.406944 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309741.442364 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n-1714309741.442796 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309741.442951 2024-04-28 01:09:01 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309741.523837 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309741.524354 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n-1714309741.524537 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n-1714309741.536360 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor test\n-1714309741.536674 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309741.536825 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309741.537895 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n-1714309741.538145 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309741.986888 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309741.987448 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n-1714309741.987653 2024-04-28 01:09:01 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n-1714309742.007221 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n-1714309742.007690 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309742.007845 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309742.561030 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-1_0-139685634012864 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n-1714309742.561473 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-1_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309742.561621 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-1_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309742.702659 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n-1714309742.703083 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309742.703267 2024-04-28 01:09:02 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309744.447146 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n-1714309744.451908 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309744.571192 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n-1714309744.571718 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n-1714309744.571872 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n-1714309744.572109 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n-1714309744.572226 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309744.572333 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309744.572528 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309744.572635 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-2_0-139685642405568 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309744.573924 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n-1714309744.574491 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n-1714309744.574685 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n-1714309744.574912 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309744.575069 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309744.575233 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309744.575439 2024-04-28 01:09:04 MainProcess-216764 ThreadPoolExecutor-0_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309744.579563 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n-1714309744.579968 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n-1714309744.580200 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n-1714309744.580389 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n-1714309744.580511 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n-1714309744.580657 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n-1714309744.580806 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n-1714309744.580994 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n-1714309744.581152 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n-1714309744.581300 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n-1714309744.581447 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n-1714309744.581604 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n-1714309744.581733 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n-1714309744.581873 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n-1714309744.582116 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n-1714309744.587502 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n-1714309744.587932 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n-1714309744.588054 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n-1714309744.588212 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309744.595522 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309744.596010 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n-1714309744.596160 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n-1714309744.596292 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309744.603543 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309744.604027 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n-1714309744.604220 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n-1714309744.604366 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309744.611554 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309744.612041 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n-1714309744.612199 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n-1714309744.612357 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n-1714309744.612537 2024-04-28 01:09:04 MainProcess-216764 MainThread-139685797294144 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n-1714309758.132921 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.rundirs:35 make_rundir DEBUG: Parsl run initializing in rundir: runinfo/001\n-1714309758.134527 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n+1748720244.464126 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n+1748720244.464317 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n+1748720244.468554 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:121 __init__ INFO: Run id is: 4b1de0ec-cefa-48f7-b4f6-52eff84ce7ef\n+1748720244.660867 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720244.661051 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720244.661170 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n+1748720244.661274 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n+1748720244.661506 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n+1748720244.661633 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n+1748720244.671009 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n+1748720244.671195 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720244.751811 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720244.751991 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n+1748720244.752110 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n+1748720244.757431 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n+1748720244.757672 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720244.757785 2025-06-01 09:37:24 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720244.762087 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor test\n+1748720244.762271 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720244.901167 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720244.901384 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n+1748720244.901504 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n+1748720244.908566 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor test\n+1748720244.908713 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720244.908804 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720244.909535 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n+1748720244.909702 2025-06-01 09:37:24 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720245.191849 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720245.196663 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n+1748720245.196811 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n+1748720245.200679 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n+1748720245.201146 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720245.201358 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720245.506657 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n+1748720245.506921 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720245.507027 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720245.546665 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-0_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n+1748720245.546911 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-0_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720245.547009 2025-06-01 09:37:25 MainProcess-1005038 ThreadPoolExecutor-0_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720246.260641 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor test\n+1748720246.260921 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720246.414480 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n+1748720246.414804 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n+1748720246.414927 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n+1748720246.415096 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor test\n+1748720246.415192 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720246.415274 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720246.415426 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720246.415515 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-2_0-140365985633984 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720246.416620 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n+1748720246.417353 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n+1748720246.417477 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n+1748720246.417611 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720246.417715 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720246.417818 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720246.417928 2025-06-01 09:37:26 MainProcess-1005038 ThreadPoolExecutor-1_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720246.418219 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n+1748720246.418485 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n+1748720246.418661 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n+1748720246.418802 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n+1748720246.418935 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n+1748720246.419069 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n+1748720246.419214 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n+1748720246.419346 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n+1748720246.419481 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n+1748720246.419613 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n+1748720246.419736 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n+1748720246.419860 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n+1748720246.419980 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n+1748720246.420099 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n+1748720246.420306 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n+1748720246.424553 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n+1748720246.424738 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n+1748720246.424876 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n+1748720246.425014 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720246.425282 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720246.425435 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n+1748720246.425554 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n+1748720246.425673 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720246.428624 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720246.428797 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n+1748720246.428929 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n+1748720246.429056 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720246.432617 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720246.432795 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n+1748720246.432927 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n+1748720246.433061 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n+1748720246.433195 2025-06-01 09:37:26 MainProcess-1005038 MainThread-140366135308352 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n+1748720252.289215 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.rundirs:35 make_rundir DEBUG: Parsl run initializing in rundir: runinfo/001\n+1748720252.290318 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n Config(\n app_cache=True, \n checkpoint_files=None, \n checkpoint_mode=None, \n checkpoint_period=None, \n executors=(ThreadPoolExecutor(\n label='default', \n@@ -133,104 +133,104 @@\n retries=0, \n retry_handler=None, \n run_dir='runinfo', \n strategy='none', \n strategy_period=5, \n usage_tracking=False\n )\n-1714309758.134877 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n-1714309758.135154 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n-1714309758.143957 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:121 __init__ INFO: Run id is: b7b13507-93c0-4f9a-b0a6-cefed119a1be\n-1714309758.201051 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309758.201477 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309758.201660 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n-1714309758.201840 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n-1714309758.202334 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n-1714309758.202562 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n-1714309758.218862 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n-1714309758.219290 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309758.511474 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309758.512080 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n-1714309758.512369 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n-1714309758.523652 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n-1714309758.524209 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309758.524398 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309758.535959 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor test\n-1714309758.536516 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309758.773925 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309758.774433 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n-1714309758.774662 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n-1714309758.803590 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor test\n-1714309758.804051 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309758.804301 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309758.805447 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n-1714309758.805719 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309759.106802 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309759.107373 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n-1714309759.107641 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n-1714309759.123588 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n-1714309759.124052 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309759.124285 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309759.975518 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-4_0-139685422692032 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n-1714309759.976077 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-4_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309759.976271 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-4_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309760.078735 2024-04-28 01:09:20 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n-1714309760.079192 2024-04-28 01:09:20 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309760.079437 2024-04-28 01:09:20 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309761.704099 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n-1714309761.704713 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309761.901386 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n-1714309761.901860 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n-1714309761.902040 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n-1714309761.902267 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n-1714309761.902408 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309761.902546 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309761.902769 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309761.902907 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309761.903526 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n-1714309761.903838 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n-1714309761.904086 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n-1714309761.904397 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309761.904615 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309761.904833 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309761.905040 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309761.907661 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n-1714309761.908092 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n-1714309761.908320 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n-1714309761.908492 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n-1714309761.908705 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n-1714309761.908900 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n-1714309761.909057 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n-1714309761.909276 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n-1714309761.909414 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n-1714309761.909592 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n-1714309761.909778 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n-1714309761.909982 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n-1714309761.910183 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n-1714309761.910371 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n-1714309761.910665 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n-1714309761.915440 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n-1714309761.915864 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n-1714309761.916058 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n-1714309761.916268 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309761.923503 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309761.923980 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n-1714309761.924202 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n-1714309761.924404 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309761.928840 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309761.929354 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n-1714309761.929561 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n-1714309761.929736 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309761.935507 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309761.935935 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n-1714309761.936122 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n-1714309761.936353 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n-1714309761.936553 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n-1714309782.198539 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.rundirs:35 make_rundir DEBUG: Parsl run initializing in rundir: runinfo/002\n-1714309782.199744 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n+1748720252.290546 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n+1748720252.290721 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n+1748720252.290929 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:121 __init__ INFO: Run id is: cfe101a9-8f91-478e-b373-1864698a9b62\n+1748720252.322228 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720252.322408 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720252.322521 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n+1748720252.322627 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n+1748720252.322865 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n+1748720252.323004 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n+1748720252.326438 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n+1748720252.326647 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720252.451619 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720252.451951 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n+1748720252.452103 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n+1748720252.460605 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n+1748720252.460786 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720252.460985 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720252.465423 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor test\n+1748720252.465633 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720252.578380 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720252.578709 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n+1748720252.578851 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n+1748720252.588663 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor test\n+1748720252.588980 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720252.589118 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720252.589942 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n+1748720252.590433 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720252.724250 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720252.724561 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n+1748720252.724718 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n+1748720252.729340 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n+1748720252.732668 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720252.732790 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720253.055862 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-4_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n+1748720253.056170 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-4_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720253.056292 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-4_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720253.074716 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n+1748720253.080079 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720253.080228 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720253.812861 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n+1748720253.813301 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720253.929286 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n+1748720253.929980 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n+1748720253.930243 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n+1748720253.930593 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n+1748720253.930966 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720253.931279 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720253.931847 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720253.932095 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720253.932887 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n+1748720253.933312 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n+1748720253.933582 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n+1748720253.933812 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720253.933986 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720253.934144 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720253.934285 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720253.936605 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n+1748720253.936805 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n+1748720253.936936 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n+1748720253.937044 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n+1748720253.937177 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n+1748720253.937279 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n+1748720253.937393 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n+1748720253.937497 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n+1748720253.937593 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n+1748720253.937690 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n+1748720253.937804 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n+1748720253.937905 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n+1748720253.938002 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n+1748720253.938098 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n+1748720253.938261 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n+1748720253.938550 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n+1748720253.938713 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n+1748720253.938822 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n+1748720253.938931 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720253.939162 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720253.939283 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n+1748720253.939383 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n+1748720253.939479 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720253.939684 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720253.939803 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n+1748720253.939903 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n+1748720253.939998 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720253.948550 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720253.948773 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n+1748720253.948961 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n+1748720253.949131 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n+1748720253.949308 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n+1748720266.196417 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.rundirs:35 make_rundir DEBUG: Parsl run initializing in rundir: runinfo/002\n+1748720266.197858 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n Config(\n app_cache=True, \n checkpoint_files=None, \n checkpoint_mode=None, \n checkpoint_period=None, \n executors=(ThreadPoolExecutor(\n label='default', \n@@ -247,98 +247,98 @@\n retries=0, \n retry_handler=None, \n run_dir='runinfo', \n strategy='none', \n strategy_period=5, \n usage_tracking=False\n )\n-1714309782.200005 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n-1714309782.200230 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n-1714309782.200494 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:121 __init__ INFO: Run id is: da9c4179-dccb-4ef7-b1f6-3a16aed3e820\n-1714309782.215937 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309782.216301 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309782.216476 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n-1714309782.216649 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n-1714309782.217028 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n-1714309782.217251 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n-1714309782.219932 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n-1714309782.220188 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.457192 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.457636 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n-1714309782.457857 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n-1714309782.465479 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n-1714309782.465891 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309782.466105 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309782.473170 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor default\n-1714309782.473647 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.602884 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.603537 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n-1714309782.603742 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n-1714309782.604988 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor default\n-1714309782.605380 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309782.605677 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309782.607512 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n-1714309782.607834 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.770062 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.770835 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n-1714309782.771186 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n-1714309782.771569 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n-1714309782.771831 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309782.772089 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309783.063050 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n-1714309783.063531 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309783.063746 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309783.370860 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n-1714309783.372313 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309783.372624 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309784.175055 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n-1714309784.175717 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309784.309457 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n-1714309784.310065 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n-1714309784.310324 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n-1714309784.310608 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n-1714309784.310847 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309784.311106 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309784.311569 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309784.311853 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309784.314016 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n-1714309784.314586 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n-1714309784.314848 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n-1714309784.315125 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309784.315426 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309784.315653 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309784.315877 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309784.319541 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n-1714309784.319957 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n-1714309784.320206 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n-1714309784.320404 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n-1714309784.320597 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n-1714309784.320849 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n-1714309784.321041 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n-1714309784.321230 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n-1714309784.321475 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n-1714309784.321663 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n-1714309784.321880 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n-1714309784.322084 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n-1714309784.322272 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n-1714309784.322472 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n-1714309784.322753 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n-1714309784.332150 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n-1714309784.332577 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n-1714309784.332752 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n-1714309784.332935 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.333499 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.333674 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n-1714309784.333853 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n-1714309784.334016 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.334248 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.334457 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n-1714309784.334668 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n-1714309784.334876 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.335542 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.335730 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n-1714309784.336037 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n-1714309784.336409 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n-1714309784.336705 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n-1714309865.970310 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n-1714309865.970541 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n-1714309865.970636 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720266.198115 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n+1748720266.198321 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n+1748720266.198567 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:121 __init__ INFO: Run id is: 8a5a8632-0e29-47d4-bc49-adef316b86a3\n+1748720266.263263 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720266.263638 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720266.263803 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n+1748720266.263962 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n+1748720266.264362 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n+1748720266.272664 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n+1748720266.278766 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n+1748720266.279027 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720266.833710 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720266.834106 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n+1748720266.834284 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n+1748720266.846800 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor default\n+1748720266.847139 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720266.896317 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n+1748720266.896719 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720266.896856 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720266.995617 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720266.995996 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n+1748720266.996157 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n+1748720267.005287 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor default\n+1748720267.005596 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720267.005786 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720267.006587 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n+1748720267.006815 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720267.171794 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720267.172124 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n+1748720267.172280 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n+1748720267.172461 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n+1748720267.172631 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720267.172752 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720267.447453 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n+1748720267.447796 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720267.452584 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720267.759128 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n+1748720267.759459 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720267.759594 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720268.474099 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor test\n+1748720268.474523 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720268.574935 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n+1748720268.575340 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n+1748720268.575510 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n+1748720268.580863 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor test\n+1748720268.581200 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720268.581333 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720268.581505 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n+1748720268.581662 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720268.581786 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720268.581989 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n+1748720268.582144 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n+1748720268.582301 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720268.582452 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720268.582600 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720268.582744 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720268.582996 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n+1748720268.583192 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n+1748720268.583359 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n+1748720268.583486 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n+1748720268.583616 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n+1748720268.583737 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n+1748720268.583865 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n+1748720268.583994 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n+1748720268.584114 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n+1748720268.584234 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n+1748720268.584353 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n+1748720268.584471 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n+1748720268.584639 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n+1748720268.584801 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n+1748720268.585049 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n+1748720268.585375 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n+1748720268.585547 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n+1748720268.585675 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n+1748720268.585807 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.600555 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.600755 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n+1748720268.600879 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n+1748720268.600997 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.604540 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.604700 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n+1748720268.604821 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n+1748720268.604936 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.608538 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.608700 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n+1748720268.608831 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n+1748720268.608954 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n+1748720268.609094 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n+1748720379.060691 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720379.060926 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720379.061025 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n"}, {"source1": "./usr/lib/python3/dist-packages/runinfo/001/parsl.log", "source2": "./usr/lib/python3/dist-packages/runinfo/001/parsl.log", "unified_diff": "@@ -1,8 +1,8 @@\n-1714309758.134527 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n+1748720252.290318 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n Config(\n app_cache=True, \n checkpoint_files=None, \n checkpoint_mode=None, \n checkpoint_period=None, \n executors=(ThreadPoolExecutor(\n label='default', \n@@ -19,104 +19,104 @@\n retries=0, \n retry_handler=None, \n run_dir='runinfo', \n strategy='none', \n strategy_period=5, \n usage_tracking=False\n )\n-1714309758.134877 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n-1714309758.135154 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n-1714309758.143957 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:121 __init__ INFO: Run id is: b7b13507-93c0-4f9a-b0a6-cefed119a1be\n-1714309758.201051 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309758.201477 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309758.201660 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n-1714309758.201840 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n-1714309758.202334 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n-1714309758.202562 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n-1714309758.218862 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n-1714309758.219290 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309758.511474 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309758.512080 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n-1714309758.512369 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n-1714309758.523652 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n-1714309758.524209 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309758.524398 2024-04-28 01:09:18 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309758.535959 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor test\n-1714309758.536516 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309758.773925 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309758.774433 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n-1714309758.774662 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n-1714309758.803590 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor test\n-1714309758.804051 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309758.804301 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309758.805447 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n-1714309758.805719 2024-04-28 01:09:18 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309759.106802 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309759.107373 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n-1714309759.107641 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n-1714309759.123588 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n-1714309759.124052 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309759.124285 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309759.975518 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-4_0-139685422692032 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n-1714309759.976077 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-4_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309759.976271 2024-04-28 01:09:19 MainProcess-216764 ThreadPoolExecutor-4_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309760.078735 2024-04-28 01:09:20 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n-1714309760.079192 2024-04-28 01:09:20 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309760.079437 2024-04-28 01:09:20 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309761.704099 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n-1714309761.704713 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309761.901386 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n-1714309761.901860 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n-1714309761.902040 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n-1714309761.902267 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n-1714309761.902408 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309761.902546 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309761.902769 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309761.902907 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-5_0-139685634012864 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309761.903526 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n-1714309761.903838 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n-1714309761.904086 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n-1714309761.904397 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309761.904615 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309761.904833 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309761.905040 2024-04-28 01:09:21 MainProcess-216764 ThreadPoolExecutor-3_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309761.907661 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n-1714309761.908092 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n-1714309761.908320 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n-1714309761.908492 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n-1714309761.908705 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n-1714309761.908900 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n-1714309761.909057 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n-1714309761.909276 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n-1714309761.909414 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n-1714309761.909592 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n-1714309761.909778 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n-1714309761.909982 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n-1714309761.910183 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n-1714309761.910371 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n-1714309761.910665 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n-1714309761.915440 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n-1714309761.915864 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n-1714309761.916058 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n-1714309761.916268 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309761.923503 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309761.923980 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n-1714309761.924202 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n-1714309761.924404 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309761.928840 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309761.929354 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n-1714309761.929561 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n-1714309761.929736 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309761.935507 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309761.935935 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n-1714309761.936122 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n-1714309761.936353 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n-1714309761.936553 2024-04-28 01:09:21 MainProcess-216764 MainThread-139685797294144 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n-1714309782.198539 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.rundirs:35 make_rundir DEBUG: Parsl run initializing in rundir: runinfo/002\n-1714309782.199744 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n+1748720252.290546 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n+1748720252.290721 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n+1748720252.290929 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:121 __init__ INFO: Run id is: cfe101a9-8f91-478e-b373-1864698a9b62\n+1748720252.322228 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720252.322408 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720252.322521 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n+1748720252.322627 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n+1748720252.322865 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n+1748720252.323004 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n+1748720252.326438 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n+1748720252.326647 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720252.451619 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720252.451951 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n+1748720252.452103 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n+1748720252.460605 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n+1748720252.460786 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720252.460985 2025-06-01 09:37:32 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720252.465423 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor test\n+1748720252.465633 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720252.578380 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720252.578709 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n+1748720252.578851 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n+1748720252.588663 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor test\n+1748720252.588980 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720252.589118 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720252.589942 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n+1748720252.590433 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720252.724250 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720252.724561 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n+1748720252.724718 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n+1748720252.729340 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n+1748720252.732668 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720252.732790 2025-06-01 09:37:32 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720253.055862 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-4_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n+1748720253.056170 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-4_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720253.056292 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-4_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720253.074716 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n+1748720253.080079 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720253.080228 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720253.812861 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n+1748720253.813301 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720253.929286 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n+1748720253.929980 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n+1748720253.930243 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n+1748720253.930593 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n+1748720253.930966 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720253.931279 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720253.931847 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720253.932095 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-5_0-140365906572992 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720253.932887 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n+1748720253.933312 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n+1748720253.933582 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n+1748720253.933812 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720253.933986 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720253.934144 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720253.934285 2025-06-01 09:37:33 MainProcess-1005038 ThreadPoolExecutor-3_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720253.936605 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n+1748720253.936805 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n+1748720253.936936 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n+1748720253.937044 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n+1748720253.937177 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n+1748720253.937279 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n+1748720253.937393 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n+1748720253.937497 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n+1748720253.937593 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n+1748720253.937690 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n+1748720253.937804 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n+1748720253.937905 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n+1748720253.938002 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n+1748720253.938098 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n+1748720253.938261 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n+1748720253.938550 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n+1748720253.938713 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n+1748720253.938822 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n+1748720253.938931 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720253.939162 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720253.939283 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n+1748720253.939383 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n+1748720253.939479 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720253.939684 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720253.939803 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n+1748720253.939903 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n+1748720253.939998 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720253.948550 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720253.948773 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n+1748720253.948961 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n+1748720253.949131 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n+1748720253.949308 2025-06-01 09:37:33 MainProcess-1005038 MainThread-140366135308352 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n+1748720266.196417 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.rundirs:35 make_rundir DEBUG: Parsl run initializing in rundir: runinfo/002\n+1748720266.197858 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n Config(\n app_cache=True, \n checkpoint_files=None, \n checkpoint_mode=None, \n checkpoint_period=None, \n executors=(ThreadPoolExecutor(\n label='default', \n@@ -133,98 +133,98 @@\n retries=0, \n retry_handler=None, \n run_dir='runinfo', \n strategy='none', \n strategy_period=5, \n usage_tracking=False\n )\n-1714309782.200005 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n-1714309782.200230 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n-1714309782.200494 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:121 __init__ INFO: Run id is: da9c4179-dccb-4ef7-b1f6-3a16aed3e820\n-1714309782.215937 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309782.216301 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309782.216476 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n-1714309782.216649 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n-1714309782.217028 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n-1714309782.217251 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n-1714309782.219932 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n-1714309782.220188 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.457192 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.457636 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n-1714309782.457857 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n-1714309782.465479 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n-1714309782.465891 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309782.466105 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309782.473170 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor default\n-1714309782.473647 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.602884 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.603537 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n-1714309782.603742 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n-1714309782.604988 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor default\n-1714309782.605380 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309782.605677 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309782.607512 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n-1714309782.607834 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.770062 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.770835 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n-1714309782.771186 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n-1714309782.771569 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n-1714309782.771831 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309782.772089 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309783.063050 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n-1714309783.063531 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309783.063746 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309783.370860 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n-1714309783.372313 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309783.372624 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309784.175055 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n-1714309784.175717 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309784.309457 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n-1714309784.310065 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n-1714309784.310324 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n-1714309784.310608 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n-1714309784.310847 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309784.311106 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309784.311569 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309784.311853 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309784.314016 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n-1714309784.314586 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n-1714309784.314848 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n-1714309784.315125 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309784.315426 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309784.315653 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309784.315877 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309784.319541 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n-1714309784.319957 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n-1714309784.320206 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n-1714309784.320404 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n-1714309784.320597 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n-1714309784.320849 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n-1714309784.321041 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n-1714309784.321230 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n-1714309784.321475 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n-1714309784.321663 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n-1714309784.321880 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n-1714309784.322084 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n-1714309784.322272 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n-1714309784.322472 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n-1714309784.322753 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n-1714309784.332150 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n-1714309784.332577 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n-1714309784.332752 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n-1714309784.332935 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.333499 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.333674 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n-1714309784.333853 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n-1714309784.334016 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.334248 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.334457 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n-1714309784.334668 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n-1714309784.334876 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.335542 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.335730 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n-1714309784.336037 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n-1714309784.336409 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n-1714309784.336705 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n-1714309865.970310 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n-1714309865.970541 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n-1714309865.970636 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720266.198115 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n+1748720266.198321 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n+1748720266.198567 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:121 __init__ INFO: Run id is: 8a5a8632-0e29-47d4-bc49-adef316b86a3\n+1748720266.263263 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720266.263638 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720266.263803 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n+1748720266.263962 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n+1748720266.264362 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n+1748720266.272664 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n+1748720266.278766 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n+1748720266.279027 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720266.833710 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720266.834106 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n+1748720266.834284 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n+1748720266.846800 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor default\n+1748720266.847139 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720266.896317 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n+1748720266.896719 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720266.896856 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720266.995617 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720266.995996 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n+1748720266.996157 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n+1748720267.005287 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor default\n+1748720267.005596 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720267.005786 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720267.006587 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n+1748720267.006815 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720267.171794 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720267.172124 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n+1748720267.172280 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n+1748720267.172461 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n+1748720267.172631 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720267.172752 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720267.447453 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n+1748720267.447796 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720267.452584 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720267.759128 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n+1748720267.759459 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720267.759594 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720268.474099 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor test\n+1748720268.474523 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720268.574935 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n+1748720268.575340 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n+1748720268.575510 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n+1748720268.580863 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor test\n+1748720268.581200 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720268.581333 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720268.581505 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n+1748720268.581662 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720268.581786 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720268.581989 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n+1748720268.582144 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n+1748720268.582301 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720268.582452 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720268.582600 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720268.582744 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720268.582996 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n+1748720268.583192 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n+1748720268.583359 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n+1748720268.583486 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n+1748720268.583616 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n+1748720268.583737 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n+1748720268.583865 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n+1748720268.583994 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n+1748720268.584114 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n+1748720268.584234 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n+1748720268.584353 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n+1748720268.584471 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n+1748720268.584639 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n+1748720268.584801 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n+1748720268.585049 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n+1748720268.585375 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n+1748720268.585547 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n+1748720268.585675 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n+1748720268.585807 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.600555 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.600755 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n+1748720268.600879 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n+1748720268.600997 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.604540 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.604700 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n+1748720268.604821 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n+1748720268.604936 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.608538 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.608700 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n+1748720268.608831 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n+1748720268.608954 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n+1748720268.609094 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n+1748720379.060691 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720379.060926 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720379.061025 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n"}, {"source1": "./usr/lib/python3/dist-packages/runinfo/002/parsl.log", "source2": "./usr/lib/python3/dist-packages/runinfo/002/parsl.log", "unified_diff": "@@ -1,8 +1,8 @@\n-1714309782.199744 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n+1748720266.197858 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:91 __init__ INFO: Starting DataFlowKernel with config\n Config(\n app_cache=True, \n checkpoint_files=None, \n checkpoint_mode=None, \n checkpoint_period=None, \n executors=(ThreadPoolExecutor(\n label='default', \n@@ -19,98 +19,98 @@\n retries=0, \n retry_handler=None, \n run_dir='runinfo', \n strategy='none', \n strategy_period=5, \n usage_tracking=False\n )\n-1714309782.200005 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n-1714309782.200230 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n-1714309782.200494 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:121 __init__ INFO: Run id is: da9c4179-dccb-4ef7-b1f6-3a16aed3e820\n-1714309782.215937 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309782.216301 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n-1714309782.216476 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n-1714309782.216649 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n-1714309782.217028 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n-1714309782.217251 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n-1714309782.219932 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n-1714309782.220188 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.457192 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.457636 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n-1714309782.457857 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n-1714309782.465479 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n-1714309782.465891 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309782.466105 2024-04-28 01:09:42 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309782.473170 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor default\n-1714309782.473647 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.602884 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.603537 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n-1714309782.603742 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n-1714309782.604988 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor default\n-1714309782.605380 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309782.605677 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309782.607512 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n-1714309782.607834 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309782.770062 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n-1714309782.770835 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n-1714309782.771186 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n-1714309782.771569 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n-1714309782.771831 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309782.772089 2024-04-28 01:09:42 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309783.063050 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n-1714309783.063531 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n-1714309783.063746 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n-1714309783.370860 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n-1714309783.372313 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n-1714309783.372624 2024-04-28 01:09:43 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n-1714309784.175055 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor default\n-1714309784.175717 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n-1714309784.309457 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n-1714309784.310065 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n-1714309784.310324 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n-1714309784.310608 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor default\n-1714309784.310847 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309784.311106 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309784.311569 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309784.311853 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-8_0-139685422692032 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309784.314016 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n-1714309784.314586 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n-1714309784.314848 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n-1714309784.315125 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n-1714309784.315426 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n-1714309784.315653 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n-1714309784.315877 2024-04-28 01:09:44 MainProcess-216764 ThreadPoolExecutor-6_0-139685652895424 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n-1714309784.319541 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n-1714309784.319957 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n-1714309784.320206 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n-1714309784.320404 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n-1714309784.320597 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n-1714309784.320849 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n-1714309784.321041 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n-1714309784.321230 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n-1714309784.321475 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n-1714309784.321663 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n-1714309784.321880 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n-1714309784.322084 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n-1714309784.322272 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n-1714309784.322472 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n-1714309784.322753 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n-1714309784.332150 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n-1714309784.332577 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n-1714309784.332752 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n-1714309784.332935 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.333499 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.333674 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n-1714309784.333853 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n-1714309784.334016 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.334248 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.334457 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n-1714309784.334668 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n-1714309784.334876 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n-1714309784.335542 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n-1714309784.335730 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n-1714309784.336037 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n-1714309784.336409 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n-1714309784.336705 2024-04-28 01:09:44 MainProcess-216764 MainThread-139685797294144 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n-1714309865.970310 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n-1714309865.970541 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n-1714309865.970636 2024-04-28 01:11:05 MainProcess-216764 MainThread-139685797294144 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720266.198115 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:93 __init__ INFO: Parsl version: 1.3.0-dev\n+1748720266.198321 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.usage_tracking.usage:111 __init__ DEBUG: Tracking status: False\n+1748720266.198567 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:121 __init__ INFO: Run id is: 8a5a8632-0e29-47d4-bc49-adef316b86a3\n+1748720266.263263 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720266.263638 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/parsl/dataflow/dflow.py\n+1748720266.263803 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:128 __init__ DEBUG: Considering candidate for workflow name: /usr/lib/python3/dist-packages/qiime2/sdk/parallel_config.py\n+1748720266.263962 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:134 __init__ DEBUG: Using parallel_config.py as workflow name\n+1748720266.264362 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:163 __init__ INFO: App caching initialized\n+1748720266.272664 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.jobs.strategy:145 __init__ DEBUG: Scaling strategy: none\n+1748720266.278766 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:997 submit DEBUG: Task 0 will be sent to executor _parsl_internal\n+1748720266.279027 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720266.833710 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1079 submit INFO: Task 0 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720266.834106 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1085 submit DEBUG: Task 0 set to pending state with AppFuture: \n+1748720266.834284 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.memoization:222 check_memo DEBUG: Task 0 will not be memoized\n+1748720266.846800 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 1 will be sent to executor default\n+1748720266.847139 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720266.896317 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 0 try 0 launched on executor _parsl_internal\n+1748720266.896719 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720266.896856 2025-06-01 09:37:46 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720266.995617 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 1 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720266.995996 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 1 set to pending state with AppFuture: \n+1748720266.996157 2025-06-01 09:37:46 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 1 will not be memoized\n+1748720267.005287 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 1 try 0 launched on executor default\n+1748720267.005596 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720267.005786 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720267.006587 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 2 will be sent to executor default\n+1748720267.006815 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720267.171794 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 2 submitted for App _run_parsl_action, not waiting on any dependency\n+1748720267.172124 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 2 set to pending state with AppFuture: \n+1748720267.172280 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 2 will not be memoized\n+1748720267.172461 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 2 try 0 launched on executor default\n+1748720267.172631 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720267.172752 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720267.447453 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 1 completed (launched -> exec_done)\n+1748720267.447796 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 1 will not be redirected.\n+1748720267.452584 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 1 will not be redirected.\n+1748720267.759128 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:572 _complete_task INFO: Task 2 completed (launched -> exec_done)\n+1748720267.759459 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 2 will not be redirected.\n+1748720267.759594 2025-06-01 09:37:47 MainProcess-1005038 ThreadPoolExecutor-6_0-140365996123840 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 2 will not be redirected.\n+1748720268.474099 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:997 submit DEBUG: Task 3 will be sent to executor test\n+1748720268.474523 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:789 _add_output_deps DEBUG: Adding output dependencies\n+1748720268.574935 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1079 submit INFO: Task 3 submitted for App _create_future, not waiting on any dependency\n+1748720268.575340 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1085 submit DEBUG: Task 3 set to pending state with AppFuture: \n+1748720268.575510 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.memoization:222 check_memo DEBUG: Task 3 will not be memoized\n+1748720268.580863 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:747 launch_task INFO: Parsl task 3 try 0 launched on executor test\n+1748720268.581200 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720268.581333 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720268.581505 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 3 completed (launched -> exec_done)\n+1748720268.581662 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 3 will not be redirected.\n+1748720268.581786 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 3 will not be redirected.\n+1748720268.581989 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:455 handle_join_update DEBUG: Join callback for task 0, inner_app_future \n+1748720268.582144 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:572 _complete_task INFO: Task 0 completed (joining -> exec_done)\n+1748720268.582301 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720268.582452 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720268.582600 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard out for task 0 will not be redirected.\n+1748720268.582744 2025-06-01 09:37:48 MainProcess-1005038 ThreadPoolExecutor-8_0-140365898180288 parsl.dataflow.dflow:1426 log_std_stream INFO: Standard error for task 0 will not be redirected.\n+1748720268.582996 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1227 cleanup INFO: DFK cleanup initiated\n+1748720268.583192 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1123 log_task_states INFO: Summary of tasks in DFK:\n+1748720268.583359 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.unsched: 0\n+1748720268.583486 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.pending: 0\n+1748720268.583616 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running: 0\n+1748720268.583737 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.exec_done: 4\n+1748720268.583865 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.failed: 0\n+1748720268.583994 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.dep_fail: 0\n+1748720268.584114 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.launched: 0\n+1748720268.584234 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.fail_retryable: 0\n+1748720268.584353 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.memo_done: 0\n+1748720268.584471 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.joining: 0\n+1748720268.584639 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1127 log_task_states INFO: Tasks in state States.running_ended: 0\n+1748720268.584801 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1129 log_task_states INFO: End of summary\n+1748720268.585049 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1251 cleanup INFO: Closing job status poller\n+1748720268.585375 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1253 cleanup INFO: Terminated job status poller\n+1748720268.585547 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1255 cleanup INFO: Shutting down executors\n+1748720268.585675 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor default\n+1748720268.585807 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.600555 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.600755 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor default\n+1748720268.600879 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor test\n+1748720268.600997 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.604540 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.604700 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor test\n+1748720268.604821 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1258 cleanup INFO: Shutting down executor _parsl_internal\n+1748720268.604936 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:74 shutdown DEBUG: Shutting down executor, which involves waiting for running tasks to complete\n+1748720268.608538 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.executors.threads:76 shutdown DEBUG: Done with executor shutdown\n+1748720268.608700 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1260 cleanup INFO: Shut down executor _parsl_internal\n+1748720268.608831 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1262 cleanup INFO: Terminated executors\n+1748720268.608954 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1278 cleanup INFO: DFK cleanup complete\n+1748720268.609094 2025-06-01 09:37:48 MainProcess-1005038 MainThread-140366135308352 parsl.process_loggers:28 wrapped DEBUG: Normal ending for cleanup on thread MainThread\n+1748720379.060691 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720379.060926 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n+1748720379.061025 2025-06-01 09:39:39 MainProcess-1005038 MainThread-140366135308352 parsl.dataflow.dflow:1192 atexit_cleanup INFO: python process is exiting, but DFK has already been cleaned up\n"}]}]}]}]}