{"diffoscope-json-version": 1, "source1": "/srv/reproducible-results/rbuild-debian/r-b-build.y4kvtcA0/b1/tree-puzzle_5.3~rc16+dfsg-9_amd64.changes", "source2": "/srv/reproducible-results/rbuild-debian/r-b-build.y4kvtcA0/b2/tree-puzzle_5.3~rc16+dfsg-9_amd64.changes", "unified_diff": null, "details": [{"source1": "Files", "source2": "Files", "unified_diff": "@@ -1,6 +1,6 @@\n \n 84f93b063433b3d3942d215d86a1bf4f 364672 debug optional tree-ppuzzle-dbgsym_5.3~rc16+dfsg-9_amd64.deb\n 8912d4cb0d1e929d6e27200373f830fb 185260 science optional tree-ppuzzle_5.3~rc16+dfsg-9_amd64.deb\n 7798db5e18d70d75825d4026dc9db92b 328500 debug optional tree-puzzle-dbgsym_5.3~rc16+dfsg-9_amd64.deb\n- 8c1a650a11b151e15fbbe571ac6cf836 430988 doc optional tree-puzzle-doc_5.3~rc16+dfsg-9_all.deb\n+ 626aacf3255dbaf5adda86f997ba37df 430900 doc optional tree-puzzle-doc_5.3~rc16+dfsg-9_all.deb\n 10d716c2eb6e982ddb59b7331ed61b8c 168948 science optional tree-puzzle_5.3~rc16+dfsg-9_amd64.deb\n"}, {"source1": "tree-puzzle-doc_5.3~rc16+dfsg-9_all.deb", "source2": "tree-puzzle-doc_5.3~rc16+dfsg-9_all.deb", "unified_diff": null, "details": [{"source1": "file list", "source2": "file list", "unified_diff": "@@ -1,3 +1,3 @@\n -rw-r--r-- 0 0 0 4 2022-02-17 06:12:29.000000 debian-binary\n--rw-r--r-- 0 0 0 4004 2022-02-17 06:12:29.000000 control.tar.xz\n--rw-r--r-- 0 0 0 426792 2022-02-17 06:12:29.000000 data.tar.xz\n+-rw-r--r-- 0 0 0 3992 2022-02-17 06:12:29.000000 control.tar.xz\n+-rw-r--r-- 0 0 0 426716 2022-02-17 06:12:29.000000 data.tar.xz\n"}, {"source1": "control.tar.xz", "source2": "control.tar.xz", "unified_diff": null, "details": [{"source1": "control.tar", "source2": "control.tar", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "comments": ["Files differ"], "unified_diff": null}]}]}, {"source1": "xz --list", "source2": "xz --list", "unified_diff": "@@ -1,13 +1,13 @@\n Streams: 1\n Blocks: 1\n- Compressed size: 4004 B\n+ Compressed size: 3992 B\n Uncompressed size: 30.0 KiB (30720 B)\n Ratio: 0.130\n Check: CRC64\n Stream Padding: 0 B\n Streams:\n Stream Blocks CompOffset UncompOffset CompSize UncompSize Ratio Check Padding\n- 1 1 0 0 4004 30720 0.130 CRC64 0\n+ 1 1 0 0 3992 30720 0.130 CRC64 0\n Blocks:\n Stream Block CompOffset UncompOffset TotalSize UncompSize Ratio Check\n- 1 1 12 0 3968 30720 0.129 CRC64\n+ 1 1 12 0 3956 30720 0.129 CRC64\n"}]}, {"source1": "data.tar.xz", "source2": "data.tar.xz", "unified_diff": null, "details": [{"source1": "data.tar", "source2": "data.tar", "unified_diff": null, "details": [{"source1": "./usr/share/doc/tree-puzzle/examples/tests/qp-hky-rhet-clock-nucl.nucl.puzzle", "source2": "./usr/share/doc/tree-puzzle/examples/tests/qp-hky-rhet-clock-nucl.nucl.puzzle", "unified_diff": "@@ -320,18 +320,18 @@\n :\n :-----1 Thylacinus\n \n \n branch length S.E. branch length S.E.\n Thylacinus 1 0.13266 0.07077 9 0.14146 0.08889\n Sarcophilu 2 0.16398 0.05399 10 0.15536 0.07510\n-Dasyurus 3 0.00001 0.00141 11 0.07879 0.07178\n+Dasyurus 3 0.00001 0.00399 11 0.07879 0.07178\n Echymipera 4 0.20360 0.08378\n Trichosuru 5 0.15345 0.07805\n-Phalanger 6 0.18858 0.08736\n+Phalanger 6 0.18858 0.08737\n Philander 7 0.16082 0.07443 10 iterations until convergence\n Bos 8 0.30632 0.12025 log L: -569.50\n \n WARNING --- at least one branch length is close to an internal boundary!\n \n \n Consensus tree with maximum likelihood branch lengths\n"}, {"source1": "./usr/share/doc/tree-puzzle/examples/tests/qp-hky-rhet-nucl.nucl.puzzle", "source2": "./usr/share/doc/tree-puzzle/examples/tests/qp-hky-rhet-nucl.nucl.puzzle", "unified_diff": "@@ -320,18 +320,18 @@\n :\n :-----1 Thylacinus\n \n \n branch length S.E. branch length S.E.\n Thylacinus 1 0.13266 0.07077 9 0.14146 0.08889\n Sarcophilu 2 0.16398 0.05399 10 0.15536 0.07510\n-Dasyurus 3 0.00001 0.00141 11 0.07879 0.07178\n+Dasyurus 3 0.00001 0.00399 11 0.07879 0.07178\n Echymipera 4 0.20360 0.08378\n Trichosuru 5 0.15345 0.07805\n-Phalanger 6 0.18858 0.08736\n+Phalanger 6 0.18858 0.08737\n Philander 7 0.16082 0.07443 10 iterations until convergence\n Bos 8 0.30632 0.12025 log L: -569.50\n \n WARNING --- at least one branch length is close to an internal boundary!\n \n \n Consensus tree with maximum likelihood branch lengths\n"}, {"source1": "./usr/share/doc/tree-puzzle/examples/tests/ut-pure-prot.trees.clean", "source2": "./usr/share/doc/tree-puzzle/examples/tests/ut-pure-prot.trees.clean", "unified_diff": "@@ -171,15 +171,15 @@\n : :-----------------7 LGB2_LUPLU\n :\n :-1 HBB_HUMAN\n \n \n branch length S.E. branch length S.E.\n HBB_HUMAN 1 0.04 0.03 8 0.28 0.08\n-HBB_HORSE 2 0.12 0.03 9 0.00 0.00\n+HBB_HORSE 2 0.12 0.03 9 0.00 9.00\n HBA_HUMAN 3 0.02 0.02 10 0.40 0.12\n HBA_HORSE 4 0.09 0.03 11 0.60 0.11\n MYG_PHYCA 5 1.33 0.21\n GLB5_PETMA 6 0.70 0.14 9 iterations until convergence\n LGB2_LUPLU 7 1.76 0.28 log L: -1699.50\n \n WARNING --- at least one branch length is close to an internal boundary!\n"}, {"source1": "./usr/share/doc/tree-puzzle/examples/tests/ut-pure-prot.trees.puzzle", "source2": "./usr/share/doc/tree-puzzle/examples/tests/ut-pure-prot.trees.puzzle", "unified_diff": "@@ -171,15 +171,15 @@\n : :-----------------7 LGB2_LUPLU\n :\n :-1 HBB_HUMAN\n \n \n branch length S.E. branch length S.E.\n HBB_HUMAN 1 0.04834 0.03148 8 0.28039 0.08746\n-HBB_HORSE 2 0.12686 0.03876 9 0.00001 0.00100\n+HBB_HORSE 2 0.12686 0.03876 9 0.00001 9.00000\n HBA_HUMAN 3 0.02653 0.02208 10 0.40361 0.12824\n HBA_HORSE 4 0.09440 0.03145 11 0.60481 0.11282\n MYG_PHYCA 5 1.33106 0.21114\n GLB5_PETMA 6 0.70107 0.14140 9 iterations until convergence\n LGB2_LUPLU 7 1.76830 0.28198 log L: -1699.50\n \n WARNING --- at least one branch length is close to an internal boundary!\n@@ -251,15 +251,15 @@\n : :-------6 GLB5_PETMA\n :\n :-1 HBB_HUMAN\n \n \n branch length S.E. branch length S.E.\n HBB_HUMAN 1 0.04869 0.03153 8 0.27871 0.08717\n-HBB_HORSE 2 0.12653 0.03874 9 0.12334 0.15661\n+HBB_HORSE 2 0.12653 0.03874 9 0.12334 0.15660\n HBA_HUMAN 3 0.02634 0.02204 10 0.39110 0.12780\n HBA_HORSE 4 0.09459 0.03147 11 0.60627 0.11286\n MYG_PHYCA 5 1.22880 0.20960\n GLB5_PETMA 6 0.69972 0.14141 11 iterations until convergence\n LGB2_LUPLU 7 1.68480 0.28106 log L: -1699.32\n \n \n@@ -291,15 +291,15 @@\n :\n :-1 HBB_HUMAN\n \n \n branch length S.E. branch length S.E.\n HBB_HUMAN 1 0.04834 0.03148 8 0.40364 0.12824\n HBB_HORSE 2 0.12685 0.03876 9 0.28040 0.08746\n-HBA_HUMAN 3 0.02653 0.02208 10 0.60481 0.11281\n+HBA_HUMAN 3 0.02653 0.02208 10 0.60481 0.11282\n HBA_HORSE 4 0.09440 0.03145\n MYG_PHYCA 5 1.33095 0.21112\n GLB5_PETMA 6 0.70107 0.14140 10 iterations until convergence\n LGB2_LUPLU 7 1.76831 0.28198 log L: -1699.50\n \n \n Unrooted user defined tree with maximum likelihood branch lengths\n"}]}, {"source1": "xz --list", "source2": "xz --list", "unified_diff": "@@ -1,13 +1,13 @@\n Streams: 1\n Blocks: 1\n- 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