Diff of the two buildlogs: -- --- b1/build.log 2023-06-10 05:19:39.499262162 +0000 +++ b2/build.log 2023-06-10 07:37:50.312671349 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jul 11 22:39:59 -12 2024 -I: pbuilder-time-stamp: 1720780799 +I: Current time: Sat Jun 10 19:19:46 +14 2023 +I: pbuilder-time-stamp: 1686374386 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./elastix_5.0.1.orig.tar.gz] I: copying [./elastix_5.0.1-4.debian.tar.xz] I: Extracting source -gpgv: Signature made Thu Nov 3 00:32:04 2022 -12 +gpgv: Signature made Fri Nov 4 02:32:04 2022 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -29,135 +29,167 @@ dpkg-source: info: applying no_include_install.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3931243/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 10 19:20 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='1cc8e1210c26465eb088ffc8e49c06ca' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3931243' - PS1='# ' - PS2='> ' + INVOCATION_ID=e5d3730a63b54f788c61170cae4f34cb + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=943923 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.tUmTJKtg/pbuilderrc_yy9K --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.tUmTJKtg/b1 --logfile b1/build.log elastix_5.0.1-4.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.tUmTJKtg/pbuilderrc_TC7s --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.tUmTJKtg/b2 --logfile b2/build.log --extrapackages usrmerge elastix_5.0.1-4.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos5-amd64 6.1.0-0.deb11.7-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.20-2~bpo11+1 (2023-04-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux I: ls -l /bin total 5632 - -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 - -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore - -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat - -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp - -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod - -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown - -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp - -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash - -rwxr-xr-x 1 root root 121904 Sep 20 2022 date - -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd - -rwxr-xr-x 1 root root 102200 Sep 20 2022 df - -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir - -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg - lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname - -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo - -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 35664 Sep 20 2022 false - -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt - -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount - -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname - -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln - -rwxr-xr-x 1 root root 53024 Mar 23 2023 login - -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls - -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk - -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir - -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod - -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp - -rwxr-xr-x 1 root root 59712 Mar 22 2023 more - -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount - -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint - -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv - lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd - lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash - -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink - -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm - -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts - -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash - -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep - -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty - -rwsr-xr-x 1 root root 72000 Mar 22 2023 su - -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync - -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar - -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile - -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch - -rwxr-xr-x 1 root root 35664 Sep 20 2022 true - -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server - -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount - -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir - -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl - lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/3931243/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1265648 Apr 24 11:23 bash + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bunzip2 + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzcat + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzip2 + -rwxr-xr-x 1 root root 14568 Sep 19 2022 bzip2recover + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore + -rwxr-xr-x 1 root root 44016 Sep 21 2022 cat + -rwxr-xr-x 1 root root 68656 Sep 21 2022 chgrp + -rwxr-xr-x 1 root root 64496 Sep 21 2022 chmod + -rwxr-xr-x 1 root root 72752 Sep 21 2022 chown + -rwxr-xr-x 1 root root 151152 Sep 21 2022 cp + -rwxr-xr-x 1 root root 125640 Jan 6 03:20 dash + -rwxr-xr-x 1 root root 121904 Sep 21 2022 date + -rwxr-xr-x 1 root root 89240 Sep 21 2022 dd + -rwxr-xr-x 1 root root 102200 Sep 21 2022 df + -rwxr-xr-x 1 root root 151344 Sep 21 2022 dir + -rwxr-xr-x 1 root root 88656 Mar 24 00:02 dmesg + lrwxrwxrwx 1 root root 8 Dec 20 03:33 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Dec 20 03:33 domainname -> hostname + -rwxr-xr-x 1 root root 43856 Sep 21 2022 echo + -rwxr-xr-x 1 root root 41 Jan 25 04:43 egrep + -rwxr-xr-x 1 root root 35664 Sep 21 2022 false + -rwxr-xr-x 1 root root 41 Jan 25 04:43 fgrep + -rwxr-xr-x 1 root root 85600 Mar 24 00:02 findmnt + -rwsr-xr-x 1 root root 35128 Mar 23 22:35 fusermount + -rwxr-xr-x 1 root root 203152 Jan 25 04:43 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98136 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22680 Dec 20 03:33 hostname + -rwxr-xr-x 1 root root 72824 Sep 21 2022 ln + -rwxr-xr-x 1 root root 53024 Mar 24 02:40 login + -rwxr-xr-x 1 root root 151344 Sep 21 2022 ls + -rwxr-xr-x 1 root root 207168 Mar 24 00:02 lsblk + -rwxr-xr-x 1 root root 97552 Sep 21 2022 mkdir + -rwxr-xr-x 1 root root 72912 Sep 21 2022 mknod + -rwxr-xr-x 1 root root 43952 Sep 21 2022 mktemp + -rwxr-xr-x 1 root root 59712 Mar 24 00:02 more + -rwsr-xr-x 1 root root 59704 Mar 24 00:02 mount + -rwxr-xr-x 1 root root 18744 Mar 24 00:02 mountpoint + -rwxr-xr-x 1 root root 142968 Sep 21 2022 mv + lrwxrwxrwx 1 root root 8 Dec 20 03:33 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 3 20:25 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43952 Sep 21 2022 pwd + lrwxrwxrwx 1 root root 4 Apr 24 11:23 rbash -> bash + -rwxr-xr-x 1 root root 52112 Sep 21 2022 readlink + -rwxr-xr-x 1 root root 72752 Sep 21 2022 rm + -rwxr-xr-x 1 root root 56240 Sep 21 2022 rmdir + -rwxr-xr-x 1 root root 27560 Nov 3 2022 run-parts + -rwxr-xr-x 1 root root 126424 Jan 6 09:55 sed + lrwxrwxrwx 1 root root 9 Jun 10 19:20 sh -> /bin/bash + -rwxr-xr-x 1 root root 43888 Sep 21 2022 sleep + -rwxr-xr-x 1 root root 85008 Sep 21 2022 stty + -rwsr-xr-x 1 root root 72000 Mar 24 00:02 su + -rwxr-xr-x 1 root root 39824 Sep 21 2022 sync + -rwxr-xr-x 1 root root 531984 Apr 7 04:25 tar + -rwxr-xr-x 1 root root 14520 Nov 3 2022 tempfile + -rwxr-xr-x 1 root root 109616 Sep 21 2022 touch + -rwxr-xr-x 1 root root 35664 Sep 21 2022 true + -rwxr-xr-x 1 root root 14568 Mar 23 22:35 ulockmgr_server + -rwsr-xr-x 1 root root 35128 Mar 24 00:02 umount + -rwxr-xr-x 1 root root 43888 Sep 21 2022 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 151344 Sep 21 2022 vdir + -rwxr-xr-x 1 root root 72024 Mar 24 00:02 wdctl + lrwxrwxrwx 1 root root 8 Dec 20 03:33 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -472,7 +504,7 @@ Get: 241 http://deb.debian.org/debian bookworm/main amd64 texlive-pictures all 2022.20230122-3 [15.8 MB] Get: 242 http://deb.debian.org/debian bookworm/main amd64 texlive-latex-extra all 2022.20230122-4 [19.2 MB] Get: 243 http://deb.debian.org/debian bookworm/main amd64 texlive-publishers all 2022.20230122-4 [21.1 MB] -Fetched 291 MB in 3s (92.7 MB/s) +Fetched 291 MB in 11s (26.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package poppler-data. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19591 files and directories currently installed.) @@ -1481,8 +1513,19 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/elastix-5.0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../elastix_5.0.1-4_source.changes +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +removed '/etc/unsupported-skip-usrmerge-conversion' +The system has been successfully converted. +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/elastix-5.0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../elastix_5.0.1-4_source.changes dpkg-buildpackage: info: source package elastix dpkg-buildpackage: info: source version 5.0.1-4 dpkg-buildpackage: info: source distribution unstable @@ -1675,7 +1718,7 @@ -- Build files have been written to: /build/elastix-5.0.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/elastix-5.0.1' dh_auto_build - cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/elastix-5.0.1 -B/build/elastix-5.0.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/elastix-5.0.1/obj-x86_64-linux-gnu/CMakeFiles /build/elastix-5.0.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -1694,119 +1737,119 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Common/MevisDicomTiff /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common/MevisDicomTiff /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/DependInfo.cmake --color= make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/depend +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/DependInfo.cmake --color= +make -f Common/CMakeFiles/elxCommon.dir/build.make Common/CMakeFiles/elxCommon.dir/build +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/elxComputeOverlap.dir/build.make Testing/CMakeFiles/elxComputeOverlap.dir/depend +make -f Testing/CMakeFiles/elxImageCompare.dir/build.make Testing/CMakeFiles/elxImageCompare.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing 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'/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o -MF CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o.d -o CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o -c 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-I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o -MF CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o.d -o CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o -c /build/elastix-5.0.1/Common/itkScaledSingleValuedNonLinearOptimizer.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Testing/CMakeFiles/elxComputeOverlap.dir/build.make Testing/CMakeFiles/elxComputeOverlap.dir/build cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/c++ 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-I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o -MF CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o.d -o CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o -c /build/elastix-5.0.1/Common/CostFunctions/itkScaledSingleValuedCostFunction.cxx make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Testing/CMakeFiles/elxImageCompare.dir/build.make Testing/CMakeFiles/elxImageCompare.dir/build -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/build +[ 1%] Building CXX object Common/xout/CMakeFiles/xoutlib.dir/xoutmain.cxx.o [ 2%] Building CXX object Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterFileParser.cxx.o -[ 2%] Building CXX object Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterFileParser.cxx.o -MF CMakeFiles/param.dir/itkParameterFileParser.cxx.o.d -o CMakeFiles/param.dir/itkParameterFileParser.cxx.o -c /build/elastix-5.0.1/Common/ParameterFileParser/itkParameterFileParser.cxx -[ 2%] Building CXX object Common/xout/CMakeFiles/xoutlib.dir/xoutmain.cxx.o [ 2%] Building CXX object Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -MF CMakeFiles/param.dir/itkParameterMapInterface.cxx.o.d -o CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -c /build/elastix-5.0.1/Common/ParameterFileParser/itkParameterMapInterface.cxx -cd 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-I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o -MF CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o.d -o CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o -c /build/elastix-5.0.1/Common/LineSearchOptimizers/itkLineSearchOptimizer.cxx -[ 4%] Building CXX object Testing/CMakeFiles/elxComputeOverlap.dir/itkCommandLineArgumentParser.cxx.o +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER 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-I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -MF CMakeFiles/param.dir/itkParameterMapInterface.cxx.o.d -o CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -c /build/elastix-5.0.1/Common/ParameterFileParser/itkParameterMapInterface.cxx [ 4%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/ANN.cpp.o +[ 4%] Building CXX object 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Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/ANN.cpp.o -MF CMakeFiles/ANNlib.dir/src/ANN.cpp.o.d -o CMakeFiles/ANNlib.dir/src/ANN.cpp.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/ANN.cpp -[ 4%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_fix_rad_search.cpp.o -[ 5%] Building CXX object Testing/CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxComputeOverlap.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxComputeOverlap.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxComputeOverlap.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 6%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_pr_search.cpp.o -[ 6%] Building CXX object Testing/CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o +[ 4%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_fix_rad_search.cpp.o +[ 5%] Building CXX object Testing/CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_fix_rad_search.cpp.o -MF CMakeFiles/ANNlib.dir/src/bd_fix_rad_search.cpp.o.d -o CMakeFiles/ANNlib.dir/src/bd_fix_rad_search.cpp.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/bd_fix_rad_search.cpp -[ 7%] Building CXX object Testing/CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_pr_search.cpp.o -MF CMakeFiles/ANNlib.dir/src/bd_pr_search.cpp.o.d -o CMakeFiles/ANNlib.dir/src/bd_pr_search.cpp.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/bd_pr_search.cpp -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o -MF CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o.d -o CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o -c /build/elastix-5.0.1/Testing/elxImageCompare.cxx cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o -MF CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o.d -o CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o -c /build/elastix-5.0.1/Testing/elxComputeOverlap.cxx -[ 7%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_search.cpp.o +[ 5%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_search.cpp.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_search.cpp.o -MF CMakeFiles/ANNlib.dir/src/bd_search.cpp.o.d -o CMakeFiles/ANNlib.dir/src/bd_search.cpp.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/bd_search.cpp -[ 7%] Linking CXX static library ../../bin/libmevisdcmtiff-5.0.a +[ 6%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_pr_search.cpp.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT 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-I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/bd_tree.cpp.o -MF CMakeFiles/ANNlib.dir/src/bd_tree.cpp.o.d -o CMakeFiles/ANNlib.dir/src/bd_tree.cpp.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/bd_tree.cpp -[ 8%] Linking CXX static library ../../bin/libxoutlib-5.0.a +[ 7%] Linking CXX static library ../../bin/libxoutlib-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common/xout && /usr/bin/cmake -P CMakeFiles/xoutlib.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common/xout && /usr/bin/cmake -E cmake_link_script CMakeFiles/xoutlib.dir/link.txt --verbose=1 /usr/bin/ar qc ../../bin/libxoutlib-5.0.a CMakeFiles/xoutlib.dir/xoutmain.cxx.o /usr/bin/ranlib ../../bin/libxoutlib-5.0.a make[3]: Leaving directory 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-I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/brute.cpp.o -MF CMakeFiles/ANNlib.dir/src/brute.cpp.o.d -o CMakeFiles/ANNlib.dir/src/brute.cpp.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/brute.cpp +[ 8%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/kd_dump.cpp.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER 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-I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations 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-I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations 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+[ 11%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/perf.cpp.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/perf.cpp.o -MF CMakeFiles/ANNlib.dir/src/perf.cpp.o.d -o CMakeFiles/ANNlib.dir/src/perf.cpp.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/perf.cpp -[ 12%] Linking CXX static library ../bin/libelxCommon-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/cmake -P CMakeFiles/elxCommon.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxCommon.dir/link.txt --verbose=1 -/usr/bin/ar qc ../bin/libelxCommon-5.0.a CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o -/usr/bin/ranlib ../bin/libelxCommon-5.0.a -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 12%] Built target elxCommon +[ 12%] Building CXX object Testing/CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 12%] Linking CXX shared library ../../../../../bin/libANNlib-5.0.so cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ANNlib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio -shared -Wl,-soname,libANNlib-5.0.so.1 -o ../../../../../bin/libANNlib-5.0.so.1 CMakeFiles/ANNlib.dir/src/ANN.cpp.o CMakeFiles/ANNlib.dir/src/bd_fix_rad_search.cpp.o CMakeFiles/ANNlib.dir/src/bd_pr_search.cpp.o CMakeFiles/ANNlib.dir/src/bd_search.cpp.o CMakeFiles/ANNlib.dir/src/bd_tree.cpp.o CMakeFiles/ANNlib.dir/src/brute.cpp.o CMakeFiles/ANNlib.dir/src/kd_dump.cpp.o CMakeFiles/ANNlib.dir/src/kd_fix_rad_search.cpp.o CMakeFiles/ANNlib.dir/src/kd_pr_search.cpp.o CMakeFiles/ANNlib.dir/src/kd_search.cpp.o CMakeFiles/ANNlib.dir/src/kd_split.cpp.o CMakeFiles/ANNlib.dir/src/kd_tree.cpp.o CMakeFiles/ANNlib.dir/src/kd_util.cpp.o CMakeFiles/ANNlib.dir/src/perf.cpp.o -L/usr/lib/x86_64-linux-gnu/lib cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/cmake -E cmake_symlink_library ../../../../../bin/libANNlib-5.0.so.1 ../../../../../bin/libANNlib-5.0.so.1 ../../../../../bin/libANNlib-5.0.so +[ 12%] Linking CXX static library ../bin/libelxCommon-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/cmake -P CMakeFiles/elxCommon.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxCommon.dir/link.txt --verbose=1 +/usr/bin/ar qc ../bin/libelxCommon-5.0.a CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +/usr/bin/ranlib ../bin/libelxCommon-5.0.a [ 12%] Built target ANNlib make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/build +[ 12%] Built target elxCommon make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 12%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o -MF CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o.d -o CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/itkANNBinaryTreeCreator.cxx @@ -1818,145 +1861,151 @@ make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 12%] Built target param make -f 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cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/elxTransformParametersCompare.dir/DependInfo.cmake --color= +make -f Testing/CMakeFiles/elxInvertTransform.dir/build.make Testing/CMakeFiles/elxInvertTransform.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/elxInvertTransform.dir/DependInfo.cmake --color= make -f Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/depend -make -f Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/DependInfo.cmake --color= -make -f Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build.make Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/depend +make -f Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/depend make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/DependInfo.cmake --color= +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/DependInfo.cmake --color= make -f Core/CMakeFiles/elxCore.dir/build.make Core/CMakeFiles/elxCore.dir/build -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/depend -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/DependInfo.cmake --color= -make -f Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/depend -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/DependInfo.cmake --color= make -f Testing/CMakeFiles/elxTransformParametersCompare.dir/build.make Testing/CMakeFiles/elxTransformParametersCompare.dir/build make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/elxInvertTransform.dir/build.make Testing/CMakeFiles/elxInvertTransform.dir/build +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make -f Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build.make Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/depend +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/DependInfo.cmake --color= +make -f Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/build -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 13%] Building CXX object Core/CMakeFiles/elxCore.dir/Kernel/elxElastixBase.cxx.o make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build.make 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-I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o -MF CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o.d -o CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o -c /build/elastix-5.0.1/Core/Install/elxComponentDatabase.cxx +[ 14%] Building CXX object Core/CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o +[ 15%] Building CXX object Core/CMakeFiles/elxCore.dir/Kernel/elxElastixBase.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o -MF CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o.d -o CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o -c /build/elastix-5.0.1/Testing/elxTransformParametersCompare.cxx cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Kernel/elxElastixBase.cxx.o -MF CMakeFiles/elxCore.dir/Kernel/elxElastixBase.cxx.o.d -o CMakeFiles/elxCore.dir/Kernel/elxElastixBase.cxx.o -c /build/elastix-5.0.1/Core/Kernel/elxElastixBase.cxx -[ 14%] Building CXX object Core/CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 14%] Building CXX object Testing/CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o -MF CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o.d -o CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o -c /build/elastix-5.0.1/Core/Configuration/elxConfiguration.cxx -[ 14%] Building CXX object Core/CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build -[ 15%] Building CXX object Core/CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o -[ 15%] Building CXX object Testing/CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o -MF CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o.d -o CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o -c /build/elastix-5.0.1/Testing/elxTransformParametersCompare.cxx +[ 15%] Building CXX object Testing/CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o +make -f Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build.make Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER 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-I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o -MF CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o.d -o CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o -c /build/elastix-5.0.1/Core/Install/elxBaseComponent.cxx +[ 15%] Building CXX object Testing/CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o [ 16%] Building CXX object Testing/CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o -MF CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o.d -o CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o -c /build/elastix-5.0.1/Core/Install/elxComponentDatabase.cxx +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o -MF CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o.d -o CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o -c /build/elastix-5.0.1/Testing/elxInvertTransform.cxx make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 16%] Building CXX object Core/CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 16%] Building CXX object Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o -[ 16%] Building CXX object Testing/CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o +[ 16%] Building CXX object Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o -MF CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o.d -o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o -c /build/elastix-5.0.1/Testing/itkAdvancedBSplineDeformableTransformTest.cxx -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o -MF CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o.d -o CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o -c /build/elastix-5.0.1/Testing/elxInvertTransform.cxx -[ 17%] Building CXX object Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o -MF CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineSODerivativeKernelFunctionTest.cxx -[ 17%] Building CXX object Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o -[ 17%] Building CXX object Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o -MF 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-I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o -MF CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o.d -o CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o -c /build/elastix-5.0.1/Core/Configuration/elxConfiguration.cxx cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o -MF CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o.d -o CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o -c /build/elastix-5.0.1/Testing/itkAdvancedRecursiveBSplineTransformTest.cxx -[ 18%] Building CXX object Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o -MF CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineDerivativeKernelFunctionTest.cxx -[ 19%] Linking CXX static library ../../../../bin/libKNNlib-5.0.a +[ 16%] Building CXX object Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o -MF CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o.d -o CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o -c /build/elastix-5.0.1/Testing/itkAdvancedLinearInterpolatorTest.cxx +[ 17%] Linking CXX static library ../../../../bin/libKNNlib-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN && /usr/bin/cmake -P CMakeFiles/KNNlib.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN && /usr/bin/cmake -E cmake_link_script CMakeFiles/KNNlib.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../bin/libKNNlib-5.0.a CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o /usr/bin/ranlib ../../../../bin/libKNNlib-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 19%] Built target KNNlib -make -f Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/depend +[ 17%] Built target KNNlib +make -f Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/DependInfo.cmake --color= +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/DependInfo.cmake --color= +[ 18%] Building CXX object Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build +make -f Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 19%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -MF CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineInterpolationWeightFunctionTest.cxx +[ 19%] Building CXX object Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o -MF CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineDerivativeKernelFunctionTest.cxx [ 19%] Building CXX object Core/CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o -MF CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o.d -o CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o -c /build/elastix-5.0.1/Core/elxProgressCommand.cxx -[ 19%] Building CXX object Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 19%] Building CXX object Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 20%] Building CXX object Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 20%] Building CXX object Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 20%] Building CXX object Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +make -f Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/depend +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make -f Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/build +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 21%] Building CXX object Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o -MF CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineSODerivativeKernelFunctionTest.cxx +[ 21%] Building CXX object Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +make -f Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/depend +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make -f Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 21%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -MF CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineInterpolationWeightFunctionTest.cxx +[ 22%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make -f Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 21%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o +[ 23%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o -MF CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx +[ 23%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 23%] Linking CXX executable ../bin/itkBSplineSODerivativeKernelFunctionTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineSODerivativeKernelFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 23%] Linking CXX executable ../bin/itkBSplineDerivativeKernelFunctionTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineDerivativeKernelFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make -f Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 21%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o +[ 23%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o -MF CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx -[ 21%] Linking CXX executable ../bin/itkBSplineSODerivativeKernelFunctionTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineSODerivativeKernelFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 21%] Linking CXX executable ../bin/itkBSplineDerivativeKernelFunctionTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineDerivativeKernelFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 21%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 21%] Built target itkBSplineSODerivativeKernelFunctionTest +[ 23%] Built target itkBSplineDerivativeKernelFunctionTest make -f Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/build.make Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/build.make Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 21%] Built target itkBSplineDerivativeKernelFunctionTest -make -f Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/build.make Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/depend -[ 21%] Building CXX object Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o +[ 23%] Building CXX object Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o -MF CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o.d -o CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o -c /build/elastix-5.0.1/Testing/itkCompareCompositeTransformsTest.cxx +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 23%] Built target itkBSplineSODerivativeKernelFunctionTest +make -f Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/build.make Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/build.make Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 21%] Building CXX object Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o +[ 23%] Building CXX object Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o -MF CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o.d -o CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o -c /build/elastix-5.0.1/Testing/itkMevisDicomTiffImageIOTest.cxx make -f Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' @@ -1964,77 +2013,73 @@ make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 21%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o +[ 23%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o -c /build/elastix-5.0.1/Testing/itkThinPlateSplineTransformPerformanceTest.cxx -[ 21%] Building CXX object Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o +[ 23%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 24%] Building CXX object Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 25%] Linking CXX executable ../bin/itkBSplineInterpolationDerivativeWeightFunctionTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationDerivativeWeightFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 25%] Linking CXX executable ../bin/elxComputeOverlap +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxComputeOverlap.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o CMakeFiles/elxComputeOverlap.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxComputeOverlap -L/usr/lib/x86_64-linux-gnu/lib /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 25%] Building CXX object Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 21%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 22%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 23%] Building CXX object Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 24%] Linking CXX executable ../bin/itkBSplineInterpolationSODerivativeWeightFunctionTest +[ 25%] Linking CXX executable ../bin/itkBSplineInterpolationWeightFunctionTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationWeightFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 26%] Linking CXX executable ../bin/itkBSplineInterpolationSODerivativeWeightFunctionTest cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationSODerivativeWeightFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 26%] Built target itkBSplineInterpolationDerivativeWeightFunctionTest make -f Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/depend +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationSODerivativeWeightFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/DependInfo.cmake --color= -[ 25%] Building CXX object Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 26%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o +[ 27%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o -c /build/elastix-5.0.1/Testing/itkThinPlateSplineTransformTest.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 26%] Built target itkBSplineInterpolationSODerivativeWeightFunctionTest +[ 27%] Built target elxComputeOverlap make -f Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/build.make Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/build.make Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 26%] Building CXX object Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o +[ 27%] Building CXX object Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o -MF CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o.d -o CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o -c /build/elastix-5.0.1/Testing/itkAdvanceOneStepParallellizationTest.cxx -[ 27%] Linking CXX executable ../bin/itkBSplineInterpolationDerivativeWeightFunctionTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationDerivativeWeightFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 28%] Linking CXX static library ../bin/libelxCore-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -P CMakeFiles/elxCore.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxCore.dir/link.txt --verbose=1 -/usr/bin/ar qc ../bin/libelxCore-5.0.a CMakeFiles/elxCore.dir/Kernel/elxElastixBase.cxx.o CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o -/usr/bin/ranlib ../bin/libelxCore-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 28%] Built target elxCore +[ 27%] Built target itkBSplineInterpolationWeightFunctionTest make -f Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/build.make Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/DependInfo.cmake --color= -[ 28%] Linking CXX executable ../bin/itkBSplineInterpolationWeightFunctionTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/build.make Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationWeightFunctionTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 29%] Building CXX object Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o +[ 28%] Building CXX object Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o -MF CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o.d -o CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o -c /build/elastix-5.0.1/Testing/itkAccumulateDerivativesParallellizationTest.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 29%] Built target itkBSplineInterpolationDerivativeWeightFunctionTest +[ 28%] Built target itkBSplineInterpolationSODerivativeWeightFunctionTest make -f Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/build.make Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/build.make Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 29%] Linking CXX executable ../bin/elxComputeOverlap -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxComputeOverlap.dir/link.txt --verbose=1 -[ 30%] Building CXX object Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o +[ 29%] Building CXX object Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o -MF CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o.d -o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o -c /build/elastix-5.0.1/Testing/itkBSplineTransformPointPerformanceTest.cxx -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o CMakeFiles/elxComputeOverlap.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxComputeOverlap -L/usr/lib/x86_64-linux-gnu/lib /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 30%] Linking CXX static library ../bin/libelxCore-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -P CMakeFiles/elxCore.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxCore.dir/link.txt --verbose=1 +/usr/bin/ar qc ../bin/libelxCore-5.0.a CMakeFiles/elxCore.dir/Kernel/elxElastixBase.cxx.o CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o +/usr/bin/ranlib ../bin/libelxCore-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 30%] Building CXX object Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 30%] Built target itkBSplineInterpolationWeightFunctionTest +[ 30%] Built target elxCore make -f Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/build.make Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/DependInfo.cmake --color= @@ -2046,96 +2091,96 @@ [ 30%] Linking CXX executable ../bin/itkMevisDicomTiffImageIOTest cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkMevisDicomTiffImageIOTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkMevisDicomTiffImageIOTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 31%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 30%] Built target elxComputeOverlap +[ 31%] Built target itkMevisDicomTiffImageIOTest make -f Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/build.make Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/FixedImagePyramids/FixedGenericPyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/build.make Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 30%] Building CXX object Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o +[ 31%] Building CXX object Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o -MF CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o.d -o CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o -c /build/elastix-5.0.1/Components/FixedImagePyramids/FixedGenericPyramid/elxFixedGenericPyramid.cxx +[ 31%] Linking CXX executable ../bin/elxImageCompare +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxImageCompare.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxImageCompare -L/usr/lib/x86_64-linux-gnu/lib /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 31%] Building CXX object Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 30%] Built target itkMevisDicomTiffImageIOTest +[ 31%] Built target elxImageCompare +[ 32%] Building CXX object Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o make -f Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/build.make Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/depend +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/FixedImagePyramids/FixedRecursivePyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/build.make Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 30%] Building CXX object Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o +[ 32%] Building CXX object Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o -MF CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o.d -o CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o -c /build/elastix-5.0.1/Components/FixedImagePyramids/FixedRecursivePyramid/elxFixedRecursivePyramid.cxx -[ 30%] Building CXX object Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 30%] Building CXX object Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 30%] Building CXX object Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o +[ 32%] Building CXX object Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx -[ 30%] Linking CXX executable ../bin/elxImageCompare -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxImageCompare.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxImageCompare -L/usr/lib/x86_64-linux-gnu/lib /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 31%] Linking CXX executable ../bin/itkAdvanceOneStepParallellizationTest +[ 32%] Linking CXX executable ../bin/elxTransformParametersCompare +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxTransformParametersCompare.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxTransformParametersCompare -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 32%] Building CXX object Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 33%] Linking CXX executable ../bin/itkAccumulateDerivativesParallellizationTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAccumulateDerivativesParallellizationTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 34%] Linking CXX executable ../bin/itkAdvanceOneStepParallellizationTest cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvanceOneStepParallellizationTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 32%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 34%] Linking CXX executable ../bin/itkAdvancedLinearInterpolatorTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedLinearInterpolatorTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 32%] Built target elxImageCompare +[ 34%] Built target itkAccumulateDerivativesParallellizationTest make -f Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/build.make Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/FixedImagePyramids/FixedSmoothingPyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/build.make Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 33%] Building CXX object Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o +[ 35%] Building CXX object Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o -MF CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o.d -o CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o -c /build/elastix-5.0.1/Components/FixedImagePyramids/FixedSmoothingPyramid/elxFixedSmoothingPyramid.cxx make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 33%] Built target itkAdvanceOneStepParallellizationTest +[ 35%] Built target elxTransformParametersCompare make -f Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/build.make Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ImageSamplers/Full /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/build.make Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 34%] Building CXX object Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o +[ 36%] Building CXX object Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o -MF CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o.d -o CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o -c /build/elastix-5.0.1/Components/ImageSamplers/Full/elxFullSampler.cxx -[ 35%] Linking CXX executable ../bin/itkAccumulateDerivativesParallellizationTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAccumulateDerivativesParallellizationTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 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/usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 35%] Linking CXX executable ../bin/itkAdvancedLinearInterpolatorTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedLinearInterpolatorTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 35%] Built target itkAccumulateDerivativesParallellizationTest +[ 36%] Built target itkAdvanceOneStepParallellizationTest make -f Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/build.make Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ImageSamplers/Grid /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/build.make Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 36%] Building CXX object Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o +[ 37%] Building CXX object Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o -MF CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o.d -o CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o -c /build/elastix-5.0.1/Components/ImageSamplers/Grid/elxGridSampler.cxx -[ 37%] Building CXX object Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +[ 38%] Linking CXX executable ../bin/itkAdvancedBSplineDeformableTransformTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedBSplineDeformableTransformTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 37%] Built target itkAdvancedLinearInterpolatorTest +[ 38%] Built target itkAdvancedLinearInterpolatorTest make -f Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/build.make Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ImageSamplers/MultInputRandomCoordinate /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/build.make Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 37%] Building CXX object Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o +[ 38%] Building CXX object Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o -MF CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o.d -o CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o -c /build/elastix-5.0.1/Components/ImageSamplers/MultInputRandomCoordinate/elxMultiInputRandomCoordinateSampler.cxx -[ 37%] Linking CXX executable ../bin/elxTransformParametersCompare -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxTransformParametersCompare.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxTransformParametersCompare -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 38%] Linking CXX executable ../bin/itkAdvancedBSplineDeformableTransformTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedBSplineDeformableTransformTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 38%] Built target elxTransformParametersCompare +[ 38%] Built target itkAdvancedBSplineDeformableTransformTest make -f Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/build.make Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ImageSamplers/Random /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/DependInfo.cmake --color= @@ -2144,8 +2189,6 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 38%] Building CXX object Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o -MF CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o.d -o CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o -c /build/elastix-5.0.1/Components/ImageSamplers/Random/elxRandomSampler.cxx -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 38%] Built target itkAdvancedBSplineDeformableTransformTest make -f Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/build.make Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ImageSamplers/RandomCoordinate /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/DependInfo.cmake --color= @@ -2154,8 +2197,13 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 39%] Building CXX object Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o -MF CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o.d -o CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o -c /build/elastix-5.0.1/Components/ImageSamplers/RandomCoordinate/elxRandomCoordinateSampler.cxx +[ 39%] Linking CXX executable ../bin/itkThinPlateSplineTransformPerformanceTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkThinPlateSplineTransformPerformanceTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm [ 39%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 39%] Built target itkThinPlateSplineTransformPerformanceTest make -f Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/build.make Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ImageSamplers/RandomSparseMask /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/DependInfo.cmake --color= @@ -2164,31 +2212,25 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 39%] Building CXX object Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o -MF CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o.d -o CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o -c /build/elastix-5.0.1/Components/ImageSamplers/RandomSparseMask/elxRandomSamplerSparseMask.cxx -[ 39%] Linking CXX executable ../bin/itkThinPlateSplineTransformPerformanceTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkThinPlateSplineTransformPerformanceTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 39%] Linking CXX executable ../bin/itkThinPlateSplineTransformTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkThinPlateSplineTransformTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkThinPlateSplineTransformTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm [ 39%] Linking CXX executable ../bin/elxInvertTransform cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxInvertTransform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxInvertTransform -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 39%] Linking CXX executable ../bin/itkAdvancedRecursiveBSplineTransformTest cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/link.txt --verbose=1 -[ 39%] Built target itkThinPlateSplineTransformTest -make -f Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/build.make Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedRecursiveBSplineTransformTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 39%] Built target elxInvertTransform +make -f Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/build.make Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Interpolators/BSplineInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/build.make Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 39%] Built target itkThinPlateSplineTransformPerformanceTest -make -f Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/build.make Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/depend [ 40%] Building CXX object Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o -MF CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o.d -o CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o -c /build/elastix-5.0.1/Components/Interpolators/BSplineInterpolator/elxBSplineInterpolator.cxx +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 40%] Built target itkAdvancedRecursiveBSplineTransformTest +make -f Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/build.make Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Interpolators/LinearInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' @@ -2196,8 +2238,11 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 40%] Building CXX object Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o -MF CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o.d -o CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o -c /build/elastix-5.0.1/Components/Interpolators/LinearInterpolator/elxLinearInterpolator.cxx +[ 40%] Linking CXX executable ../bin/itkThinPlateSplineTransformTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkThinPlateSplineTransformTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkThinPlateSplineTransformTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 40%] Built target itkAdvancedRecursiveBSplineTransformTest +[ 40%] Built target itkThinPlateSplineTransformTest make -f Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/build.make Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Interpolators/ReducedDimensionBSplineInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/DependInfo.cmake --color= @@ -2206,52 +2251,52 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 41%] Building CXX object Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o -MF CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o.d -o CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o -c /build/elastix-5.0.1/Components/Interpolators/ReducedDimensionBSplineInterpolator/elxReducedDimensionBSplineInterpolator.cxx +[ 42%] Linking CXX executable ../bin/itkBSplineTransformPointPerformanceTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineTransformPointPerformanceTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 41%] Built target elxInvertTransform +[ 42%] Built target itkBSplineTransformPointPerformanceTest make -f Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/build.make Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/AdvancedMattesMutualInformation /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/build.make Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 41%] Building CXX object Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o +[ 42%] Building CXX object Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o -MF CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o.d -o CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/AdvancedMattesMutualInformation/elxAdvancedMattesMutualInformationMetric.cxx -[ 42%] Linking CXX executable ../bin/itkBSplineTransformPointPerformanceTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineTransformPointPerformanceTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +[ 43%] Linking CXX executable ../bin/itkCompareCompositeTransformsTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkCompareCompositeTransformsTest.dir/link.txt --verbose=1 +[ 43%] Linking CXX static library ../../../bin/libLinearInterpolator-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/cmake -P CMakeFiles/LinearInterpolator.dir/cmake_clean_target.cmake +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkCompareCompositeTransformsTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/LinearInterpolator.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libLinearInterpolator-5.0.a CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o +/usr/bin/ranlib ../../../bin/libLinearInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 42%] Built target itkBSplineTransformPointPerformanceTest +[ 43%] Built target LinearInterpolator make -f Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/build.make Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/AdvancedMeanSquares /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/build.make Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o +[ 43%] Building CXX object Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o -MF CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o.d -o CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/AdvancedMeanSquares/elxAdvancedMeanSquaresMetric.cxx -[ 42%] Linking CXX executable ../bin/itkBSplineJacobianGradientPerformanceTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkBSplineJacobianGradientPerformanceTest.cxx.o CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineJacobianGradientPerformanceTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 42%] Built target itkBSplineJacobianGradientPerformanceTest +[ 43%] Built target itkCompareCompositeTransformsTest make -f Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/build.make Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/AdvancedNormalizedCorrelation /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/build.make Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o +[ 43%] Building CXX object Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o -MF CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o.d -o CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/AdvancedNormalizedCorrelation/elxAdvancedNormalizedCorrelationMetric.cxx -[ 43%] Linking CXX executable ../bin/itkCompareCompositeTransformsTest -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkCompareCompositeTransformsTest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkCompareCompositeTransformsTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[ 43%] Linking CXX static library ../../../bin/libLinearInterpolator-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/cmake -P CMakeFiles/LinearInterpolator.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/LinearInterpolator.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libLinearInterpolator-5.0.a CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o -/usr/bin/ranlib ../../../bin/libLinearInterpolator-5.0.a +[ 43%] Linking CXX executable ../bin/itkBSplineJacobianGradientPerformanceTest +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkBSplineJacobianGradientPerformanceTest.cxx.o CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineJacobianGradientPerformanceTest -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 43%] Built target LinearInterpolator +[ 43%] Built target itkBSplineJacobianGradientPerformanceTest make -f Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/build.make Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/BendingEnergyPenalty /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/DependInfo.cmake --color= @@ -2260,8 +2305,13 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 43%] Building CXX object Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o -MF CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o.d -o CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o -c /build/elastix-5.0.1/Components/Metrics/BendingEnergyPenalty/elxTransformBendingEnergyPenaltyTerm.cxx +[ 43%] Linking CXX static library ../../../bin/libGridSampler-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/cmake -P CMakeFiles/GridSampler.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/GridSampler.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libGridSampler-5.0.a CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o +/usr/bin/ranlib ../../../bin/libGridSampler-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 43%] Built target itkCompareCompositeTransformsTest +[ 43%] Built target GridSampler make -f Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/build.make Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/DependInfo.cmake --color= @@ -2270,58 +2320,58 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 43%] Building CXX object Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o -MF CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o.d -o CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/elxCorrespondingPointsEuclideanDistanceMetric.cxx -[ 43%] Linking CXX static library ../../../bin/libGridSampler-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/cmake -P CMakeFiles/GridSampler.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/GridSampler.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libGridSampler-5.0.a CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o -/usr/bin/ranlib ../../../bin/libGridSampler-5.0.a +[ 44%] Linking CXX static library ../../../bin/libRandomSampler-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/cmake -P CMakeFiles/RandomSampler.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomSampler.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libRandomSampler-5.0.a CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o +/usr/bin/ranlib ../../../bin/libRandomSampler-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 43%] Built target GridSampler +[ 44%] Built target RandomSampler make -f Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/build.make Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/DistancePreservingRigidityPenalty /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/build.make Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 44%] Building CXX object Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o +[ 45%] Building CXX object Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o -MF CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o.d -o CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o -c /build/elastix-5.0.1/Components/Metrics/DistancePreservingRigidityPenalty/elxDistancePreservingRigidityPenaltyTerm.cxx -[ 44%] Linking CXX static library ../../../bin/libFullSampler-5.0.a +[ 45%] Linking CXX static library ../../../bin/libFullSampler-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full && /usr/bin/cmake -P CMakeFiles/FullSampler.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full && /usr/bin/cmake -E cmake_link_script CMakeFiles/FullSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFullSampler-5.0.a CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o /usr/bin/ranlib ../../../bin/libFullSampler-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 44%] Built target FullSampler +[ 45%] Built target FullSampler make -f Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 44%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o +[ 45%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o -MF CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o.d -o CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/elxKNNGraphAlphaMutualInformationMetric.cxx -[ 45%] Linking CXX static library ../../../bin/libRandomSampler-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/cmake -P CMakeFiles/RandomSampler.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomSampler.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libRandomSampler-5.0.a CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o -/usr/bin/ranlib ../../../bin/libRandomSampler-5.0.a +[ 46%] Linking CXX static library ../../../bin/libRandomSamplerSparseMask-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/cmake -P CMakeFiles/RandomSamplerSparseMask.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomSamplerSparseMask.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libRandomSamplerSparseMask-5.0.a CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o +/usr/bin/ranlib ../../../bin/libRandomSamplerSparseMask-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 45%] Built target RandomSampler +[ 46%] Built target RandomSamplerSparseMask make -f Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/build.make Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/NormalizedMutualInformation /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/build.make Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 45%] Building CXX object Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o +[ 46%] Building CXX object Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o -MF CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o.d -o CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/NormalizedMutualInformation/elxNormalizedMutualInformationMetric.cxx -[ 46%] Linking CXX static library ../../../bin/libRandomSamplerSparseMask-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/cmake -P CMakeFiles/RandomSamplerSparseMask.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomSamplerSparseMask.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libRandomSamplerSparseMask-5.0.a CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o -/usr/bin/ranlib ../../../bin/libRandomSamplerSparseMask-5.0.a +[ 46%] Linking CXX static library ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/cmake -P CMakeFiles/ReducedDimensionBSplineInterpolator.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedDimensionBSplineInterpolator.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o +/usr/bin/ranlib ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 46%] Built target RandomSamplerSparseMask +[ 46%] Built target ReducedDimensionBSplineInterpolator make -f Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/build.make Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/PCAMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/DependInfo.cmake --color= @@ -2330,13 +2380,13 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 46%] Building CXX object Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o -MF CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o.d -o CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/PCAMetric/elxPCAMetric.cxx -[ 46%] Linking CXX static library ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/cmake -P CMakeFiles/ReducedDimensionBSplineInterpolator.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedDimensionBSplineInterpolator.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o -/usr/bin/ranlib ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a +[ 46%] Linking CXX static library ../../../bin/libBSplineInterpolator-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/cmake -P CMakeFiles/BSplineInterpolator.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineInterpolator.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libBSplineInterpolator-5.0.a CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o +/usr/bin/ranlib ../../../bin/libBSplineInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 46%] Built target ReducedDimensionBSplineInterpolator +[ 46%] Built target BSplineInterpolator make -f Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/build.make Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/PCAMetric2 /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/DependInfo.cmake --color= @@ -2345,58 +2395,58 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 47%] Building CXX object Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o -MF CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o.d -o CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o -c /build/elastix-5.0.1/Components/Metrics/PCAMetric2/elxPCAMetric2.cxx -[ 47%] Linking CXX static library ../../../bin/libBSplineInterpolator-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/cmake -P CMakeFiles/BSplineInterpolator.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineInterpolator.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libBSplineInterpolator-5.0.a CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o -/usr/bin/ranlib ../../../bin/libBSplineInterpolator-5.0.a +[ 48%] Linking CXX static library ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/cmake -P CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o +/usr/bin/ranlib ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 47%] Built target BSplineInterpolator +[ 48%] Built target CorrespondingPointsEuclideanDistanceMetric make -f Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/build.make Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/RigidityPenalty /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/build.make Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 48%] Building CXX object Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o +[ 49%] Building CXX object Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o -MF CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o.d -o CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o -c /build/elastix-5.0.1/Components/Metrics/RigidityPenalty/elxTransformRigidityPenaltyTerm.cxx -[ 49%] Linking CXX static library ../../../bin/libMultiInputRandomCoordinateSampler-5.0.a +[ 50%] Linking CXX static library ../../../bin/libMultiInputRandomCoordinateSampler-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate && /usr/bin/cmake -P CMakeFiles/MultiInputRandomCoordinateSampler.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiInputRandomCoordinateSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMultiInputRandomCoordinateSampler-5.0.a CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o /usr/bin/ranlib ../../../bin/libMultiInputRandomCoordinateSampler-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 49%] Built target MultiInputRandomCoordinateSampler +[ 50%] Built target MultiInputRandomCoordinateSampler make -f Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/build.make Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/SumOfPairwiseCorrelationsMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/build.make Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 49%] Building CXX object Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o +[ 50%] Building CXX object Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o -MF CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o.d -o CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/SumOfPairwiseCorrelationsMetric/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx -[ 49%] Linking CXX static library ../../../bin/libRandomCoordinateSampler-5.0.a +[ 50%] Linking CXX static library ../../../bin/libRandomCoordinateSampler-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate && /usr/bin/cmake -P CMakeFiles/RandomCoordinateSampler.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomCoordinateSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libRandomCoordinateSampler-5.0.a CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o /usr/bin/ranlib ../../../bin/libRandomCoordinateSampler-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 49%] Built target RandomCoordinateSampler +[ 50%] Built target RandomCoordinateSampler make -f Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/build.make Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/build.make Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 49%] Building CXX object Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o +[ 50%] Building CXX object Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o -MF CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o.d -o CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o -c /build/elastix-5.0.1/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/elxSumSquaredTissueVolumeDifferenceMetric.cxx -[ 50%] Linking CXX static library ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/cmake -P CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o -/usr/bin/ranlib ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a +[ 50%] Linking CXX static library ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/cmake -P CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o +/usr/bin/ranlib ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 50%] Built target CorrespondingPointsEuclideanDistanceMetric +[ 50%] Built target AdvancedNormalizedCorrelationMetric make -f Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/build.make Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Metrics/VarianceOverLastDimension /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/DependInfo.cmake --color= @@ -2420,13 +2470,13 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 51%] Building CXX object Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o -MF CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o.d -o CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o -c /build/elastix-5.0.1/Components/MovingImagePyramids/MovingGenericPyramid/elxMovingGenericPyramid.cxx -[ 52%] Linking CXX static library ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/cmake -P CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o -/usr/bin/ranlib ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a +[ 52%] Linking CXX static library ../../../bin/libVarianceOverLastDimensionMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension && /usr/bin/cmake -P CMakeFiles/VarianceOverLastDimensionMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension && /usr/bin/cmake -E cmake_link_script CMakeFiles/VarianceOverLastDimensionMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libVarianceOverLastDimensionMetric-5.0.a CMakeFiles/VarianceOverLastDimensionMetric.dir/elxVarianceOverLastDimensionMetric.cxx.o +/usr/bin/ranlib ../../../bin/libVarianceOverLastDimensionMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 52%] Built target KNNGraphAlphaMutualInformationMetric +[ 52%] Built target VarianceOverLastDimensionMetric make -f Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/build.make Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/MovingImagePyramids/MovingRecursivePyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/DependInfo.cmake --color= @@ -2435,103 +2485,103 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 53%] Building CXX object Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o -MF CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o.d -o CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o -c /build/elastix-5.0.1/Components/MovingImagePyramids/MovingRecursivePyramid/elxMovingRecursivePyramid.cxx -[ 53%] Linking CXX static library ../../../bin/libPCAMetric2-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 && /usr/bin/cmake -P CMakeFiles/PCAMetric2.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCAMetric2.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libPCAMetric2-5.0.a CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o -/usr/bin/ranlib ../../../bin/libPCAMetric2-5.0.a +[ 54%] Linking CXX static library ../../../bin/libAdvancedMeanSquaresMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/cmake -P CMakeFiles/AdvancedMeanSquaresMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedMeanSquaresMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdvancedMeanSquaresMetric-5.0.a CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o +/usr/bin/ranlib ../../../bin/libAdvancedMeanSquaresMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 53%] Built target PCAMetric2 +[ 54%] Built target AdvancedMeanSquaresMetric make -f Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/build.make Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/MovingImagePyramids/MovingSmoothingPyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/build.make Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 53%] Building CXX object Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o +[ 54%] 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-I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o -MF CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o.d -o CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o -c /build/elastix-5.0.1/Components/MovingImagePyramids/MovingSmoothingPyramid/elxMovingSmoothingPyramid.cxx -[ 53%] Linking CXX static library ../../../bin/libPCAMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/cmake -P CMakeFiles/PCAMetric.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCAMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libPCAMetric-5.0.a CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o -/usr/bin/ranlib ../../../bin/libPCAMetric-5.0.a +[ 54%] Linking CXX static library ../../../bin/libMovingGenericPyramid-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/cmake -P CMakeFiles/MovingGenericPyramid.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingGenericPyramid.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libMovingGenericPyramid-5.0.a CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o +/usr/bin/ranlib ../../../bin/libMovingGenericPyramid-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 53%] Built target PCAMetric +[ 54%] Built target MovingGenericPyramid make -f Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/build.make Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/AdaGrad /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/build.make Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 54%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o +[ 55%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o -MF CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o.d -o CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaGrad/elxAdaGrad.cxx -[ 55%] Linking CXX static library ../../../bin/libNormalizedMutualInformationMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/cmake -P CMakeFiles/NormalizedMutualInformationMetric.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/NormalizedMutualInformationMetric.dir/link.txt --verbose=1 -[ 55%] Linking CXX static library ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/cmake -P CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/cmake_clean_target.cmake -/usr/bin/ar qc ../../../bin/libNormalizedMutualInformationMetric-5.0.a CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o -/usr/bin/ranlib ../../../bin/libNormalizedMutualInformationMetric-5.0.a -/usr/bin/ranlib ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a +[ 55%] Linking CXX static library ../../../bin/libTransformRigidityPenalty-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/cmake -P CMakeFiles/TransformRigidityPenalty.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformRigidityPenalty.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libTransformRigidityPenalty-5.0.a CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o +/usr/bin/ranlib ../../../bin/libTransformRigidityPenalty-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 55%] Built target NormalizedMutualInformationMetric +[ 55%] Built target TransformRigidityPenalty make -f Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/build.make Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/depend -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticGradientDescent /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/DependInfo.cmake --color= -[ 55%] Built target AdvancedNormalizedCorrelationMetric -make -f Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build.make Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/depend -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/build.make Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/build -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build.make Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 56%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticGradientDescent/elxAdaptiveStochasticGradientDescent.cxx -[ 57%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS/elxAdaptiveStochasticLBFGS.cxx -[ 58%] Linking CXX static library ../../../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a +[ 57%] Linking CXX static library ../../../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric && /usr/bin/cmake -P CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o -[ 59%] Linking CXX static library ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/cmake -P CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/cmake_clean_target.cmake /usr/bin/ranlib ../../../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 59%] Built target SumSquaredTissueVolumeDifferenceMetric +[ 57%] Built target SumSquaredTissueVolumeDifferenceMetric +make -f Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build.make Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/depend +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make -f Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build.make Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 58%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS/elxAdaptiveStochasticLBFGS.cxx +[ 58%] Linking CXX static library ../../../bin/libPCAMetric2-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 && /usr/bin/cmake -P CMakeFiles/PCAMetric2.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCAMetric2.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libPCAMetric2-5.0.a CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o +/usr/bin/ranlib ../../../bin/libPCAMetric2-5.0.a +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 58%] Built target PCAMetric2 make -f Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/build.make Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/build.make Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -/usr/bin/ranlib ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a -[ 60%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o +[ 59%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/elxAdaptiveStochasticVarianceReducedGradient.cxx +[ 59%] Linking CXX static library ../../../bin/libPCAMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/cmake -P CMakeFiles/PCAMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCAMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libPCAMetric-5.0.a CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o +/usr/bin/ranlib ../../../bin/libPCAMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 60%] Built target SumOfPairwiseCorrelationCoefficientsMetric +[ 59%] Built target PCAMetric make -f Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/build.make Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/ConjugateGradient /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/build.make Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 60%] Building CXX object Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o +[ 59%] Building CXX object Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o -MF CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o.d -o CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/ConjugateGradient/elxConjugateGradient.cxx -[ 60%] Linking CXX static library ../../../bin/libDistancePreservingRigidityPenalty-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/cmake -P CMakeFiles/DistancePreservingRigidityPenalty.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistancePreservingRigidityPenalty.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libDistancePreservingRigidityPenalty-5.0.a CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o -/usr/bin/ranlib ../../../bin/libDistancePreservingRigidityPenalty-5.0.a +[ 60%] Linking CXX static library ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/cmake -P CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o +/usr/bin/ranlib ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 60%] Built target DistancePreservingRigidityPenalty +[ 60%] Built target SumOfPairwiseCorrelationCoefficientsMetric make -f Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/build.make Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/FiniteDifferenceGradientDescent /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/DependInfo.cmake --color= @@ -2540,32 +2590,36 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 60%] Building CXX object Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o -MF CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o.d -o CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/FiniteDifferenceGradientDescent/elxFiniteDifferenceGradientDescent.cxx -[ 61%] Linking CXX static library ../../../bin/libVarianceOverLastDimensionMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension && /usr/bin/cmake -P CMakeFiles/VarianceOverLastDimensionMetric.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension && /usr/bin/cmake -E cmake_link_script CMakeFiles/VarianceOverLastDimensionMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libVarianceOverLastDimensionMetric-5.0.a CMakeFiles/VarianceOverLastDimensionMetric.dir/elxVarianceOverLastDimensionMetric.cxx.o -/usr/bin/ranlib ../../../bin/libVarianceOverLastDimensionMetric-5.0.a +[ 60%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o -MF CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o.d -o CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaGrad/itkAdaptiveStepsizeOptimizer.cxx +[ 61%] Linking CXX static library ../../../bin/libNormalizedMutualInformationMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/cmake -P CMakeFiles/NormalizedMutualInformationMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/NormalizedMutualInformationMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libNormalizedMutualInformationMetric-5.0.a CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o +[ 62%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx +/usr/bin/ranlib ../../../bin/libNormalizedMutualInformationMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 61%] Built target VarianceOverLastDimensionMetric +[ 62%] Built target NormalizedMutualInformationMetric make -f Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/build.make Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/FullSearch /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/build.make Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 61%] Building CXX object Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o +[ 62%] Building CXX object Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o -MF CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o.d -o CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/FullSearch/elxFullSearchOptimizer.cxx -[ 61%] Building CXX object Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o +[ 62%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx +[ 62%] Building CXX object Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o -MF CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o.d -o CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/ConjugateGradient/itkGenericConjugateGradientOptimizer.cxx -[ 61%] Building CXX object Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -MF CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o.d -o CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/FiniteDifferenceGradientDescent/itkFiniteDifferenceGradientDescentOptimizer.cxx -[ 62%] Linking CXX static library ../../../bin/libFiniteDifferenceGradientDescent-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/cmake -P CMakeFiles/FiniteDifferenceGradientDescent.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/FiniteDifferenceGradientDescent.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libFiniteDifferenceGradientDescent-5.0.a CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -/usr/bin/ranlib ../../../bin/libFiniteDifferenceGradientDescent-5.0.a +[ 62%] Linking CXX static library ../../../bin/libAdaGrad-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/cmake -P CMakeFiles/AdaGrad.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaGrad.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdaGrad-5.0.a CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o +/usr/bin/ranlib ../../../bin/libAdaGrad-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 62%] Built target FiniteDifferenceGradientDescent +[ 62%] Built target AdaGrad make -f Components/Optimizers/Powell/CMakeFiles/Powell.dir/build.make Components/Optimizers/Powell/CMakeFiles/Powell.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/Powell /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/Powell /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/Powell/CMakeFiles/Powell.dir/DependInfo.cmake --color= @@ -2589,28 +2643,36 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 64%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/PreconditionedStochasticGradientDescent/elxPreconditionedStochasticGradientDescent.cxx -[ 65%] Linking CXX static library ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/cmake -P CMakeFiles/AdvancedMattesMutualInformationMetric.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedMattesMutualInformationMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o -/usr/bin/ranlib ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a +[ 64%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticGradientDescent/itkAdaptiveStochasticGradientDescentOptimizer.cxx +[ 64%] Building CXX object Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -MF CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o.d -o CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/FiniteDifferenceGradientDescent/itkFiniteDifferenceGradientDescentOptimizer.cxx +[ 65%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx +[ 66%] Linking CXX static library ../../../bin/libFiniteDifferenceGradientDescent-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/cmake -P CMakeFiles/FiniteDifferenceGradientDescent.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/FiniteDifferenceGradientDescent.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libFiniteDifferenceGradientDescent-5.0.a CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o +/usr/bin/ranlib ../../../bin/libFiniteDifferenceGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 65%] Built target AdvancedMattesMutualInformationMetric +[ 66%] Built target FiniteDifferenceGradientDescent make -f Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/build.make Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/QuasiNewtonLBFGS /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/build.make Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 65%] Building CXX object Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o +[ 66%] Building CXX object Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o -MF CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o.d -o CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/QuasiNewtonLBFGS/elxQuasiNewtonLBFGS.cxx -[ 66%] Linking CXX static library ../../../bin/libAdvancedMeanSquaresMetric-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/cmake -P CMakeFiles/AdvancedMeanSquaresMetric.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedMeanSquaresMetric.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdvancedMeanSquaresMetric-5.0.a CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o -/usr/bin/ranlib ../../../bin/libAdvancedMeanSquaresMetric-5.0.a +[ 66%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx +[ 66%] Linking CXX static library ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticGradientDescent.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticGradientDescent.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o +/usr/bin/ranlib ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 66%] Built target AdvancedMeanSquaresMetric +[ 66%] Built target AdaptiveStochasticGradientDescent make -f Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/build.make Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Optimizers/RegularStepGradientDescent /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/DependInfo.cmake --color= @@ -2634,57 +2696,53 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 67%] Building CXX object Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o -MF CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o.d -o CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/elxStandardGradientDescent.cxx -[ 67%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o -MF CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o.d -o CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaGrad/itkAdaptiveStepsizeOptimizer.cxx -[ 68%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx -[ 68%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF 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-I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticGradientDescent/itkAdaptiveStochasticGradientDescentOptimizer.cxx -[ 68%] Linking CXX static library ../../../bin/libAdaGrad-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/cmake -P CMakeFiles/AdaGrad.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaGrad.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdaGrad-5.0.a CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -/usr/bin/ranlib ../../../bin/libAdaGrad-5.0.a +[ 67%] Linking CXX static library ../../../bin/libMovingRecursivePyramid-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/cmake -P CMakeFiles/MovingRecursivePyramid.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingRecursivePyramid.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libMovingRecursivePyramid-5.0.a CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o +/usr/bin/ranlib ../../../bin/libMovingRecursivePyramid-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 68%] Built target AdaGrad +[ 67%] Built target MovingRecursivePyramid make -f Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/build.make Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Registrations/MultiMetricMultiResolutionRegistration /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/build.make Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 68%] Building CXX object Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o +[ 67%] Building CXX object Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o -MF CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o.d -o CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o -c /build/elastix-5.0.1/Components/Registrations/MultiMetricMultiResolutionRegistration/elxMultiMetricMultiResolutionRegistration.cxx -[ 69%] Building CXX object Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -MF CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o.d -o CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/QuasiNewtonLBFGS/itkQuasiNewtonLBFGSOptimizer.cxx -[ 70%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx -[ 70%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx -[ 71%] Linking CXX static library ../../../bin/libRegularStepGradientDescent-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent && /usr/bin/cmake -P CMakeFiles/RegularStepGradientDescent.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularStepGradientDescent.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libRegularStepGradientDescent-5.0.a CMakeFiles/RegularStepGradientDescent.dir/elxRegularStepGradientDescent.cxx.o -/usr/bin/ranlib ../../../bin/libRegularStepGradientDescent-5.0.a +[ 67%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS/itkAdaptiveStochasticLBFGSOptimizer.cxx +[ 68%] Linking CXX static library ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/cmake -P CMakeFiles/AdvancedMattesMutualInformationMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedMattesMutualInformationMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o +/usr/bin/ranlib ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 71%] Built target RegularStepGradientDescent +[ 68%] Built target AdvancedMattesMutualInformationMetric make -f Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/build.make Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Registrations/MultiResolutionRegistration /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/build.make Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o +[ 69%] Building CXX object Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o -MF CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o.d -o CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o -c /build/elastix-5.0.1/Components/Registrations/MultiResolutionRegistration/elxMultiResolutionRegistration.cxx -[ 72%] Linking CXX static library ../../../bin/libQuasiNewtonLBFGS-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/cmake -P CMakeFiles/QuasiNewtonLBFGS.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/cmake -E cmake_link_script CMakeFiles/QuasiNewtonLBFGS.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libQuasiNewtonLBFGS-5.0.a CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -/usr/bin/ranlib ../../../bin/libQuasiNewtonLBFGS-5.0.a +[ 69%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx +[ 70%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx +[ 71%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx +[ 72%] Linking CXX static library ../../../bin/libRegularStepGradientDescent-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent && /usr/bin/cmake -P CMakeFiles/RegularStepGradientDescent.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularStepGradientDescent.dir/link.txt --verbose=1 +[ 72%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx +/usr/bin/ar qc ../../../bin/libRegularStepGradientDescent-5.0.a CMakeFiles/RegularStepGradientDescent.dir/elxRegularStepGradientDescent.cxx.o +/usr/bin/ranlib ../../../bin/libRegularStepGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 72%] Built target QuasiNewtonLBFGS +[ 72%] Built target RegularStepGradientDescent make -f Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/build.make Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Registrations/MultiResolutionRegistrationWithFeatures /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/DependInfo.cmake --color= @@ -2693,37 +2751,37 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 73%] Building CXX object Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o -MF CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o.d -o CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o -c /build/elastix-5.0.1/Components/Registrations/MultiResolutionRegistrationWithFeatures/elxMultiResolutionRegistrationWithFeatures.cxx -[ 73%] Linking CXX static library ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticGradientDescent.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticGradientDescent.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -/usr/bin/ranlib ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a +[ 74%] Building CXX object Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -MF CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o.d -o CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/QuasiNewtonLBFGS/itkQuasiNewtonLBFGSOptimizer.cxx +[ 74%] Building CXX object Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx +[ 74%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkStochasticVarianceReducedGradientDescentOptimizer.cxx +[ 74%] Linking CXX static library ../../../bin/libAdaptiveStochasticLBFGS-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticLBFGS.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticLBFGS.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdaptiveStochasticLBFGS-5.0.a CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o +/usr/bin/ranlib ../../../bin/libAdaptiveStochasticLBFGS-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 73%] Built target AdaptiveStochasticGradientDescent +[ 74%] Built target AdaptiveStochasticLBFGS make -f Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/build.make Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ResampleInterpolators/BSplineResampleInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/build.make Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 73%] Building CXX object Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o +[ 74%] Building CXX object Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o -MF CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o.d -o CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o -c /build/elastix-5.0.1/Components/ResampleInterpolators/BSplineResampleInterpolator/elxBSplineResampleInterpolator.cxx -[ 73%] Building CXX object Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx -[ 73%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS/itkAdaptiveStochasticLBFGSOptimizer.cxx -[ 74%] Building CXX object Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o +[ 74%] Linking CXX static library ../../../bin/libQuasiNewtonLBFGS-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/cmake -P CMakeFiles/QuasiNewtonLBFGS.dir/cmake_clean_target.cmake +[ 75%] Building CXX object Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx -[ 74%] Linking CXX static library ../../../bin/libStandardGradientDescent-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/cmake -P CMakeFiles/StandardGradientDescent.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardGradientDescent.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libStandardGradientDescent-5.0.a CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o -/usr/bin/ranlib ../../../bin/libStandardGradientDescent-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/cmake -E cmake_link_script CMakeFiles/QuasiNewtonLBFGS.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libQuasiNewtonLBFGS-5.0.a CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o +/usr/bin/ranlib ../../../bin/libQuasiNewtonLBFGS-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 74%] Built target StandardGradientDescent +[ 75%] Built target QuasiNewtonLBFGS make -f Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/build.make Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/depend -[ 75%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/ResampleInterpolators/RDBSplineResampleInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' @@ -2731,68 +2789,58 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 75%] Building CXX object Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o -MF CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o.d -o CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o -c /build/elastix-5.0.1/Components/ResampleInterpolators/RDBSplineResampleInterpolator/elxRDBSplineResampleInterpolator.cxx -[ 75%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx -[ 76%] Building CXX object Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -MF CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o.d -o CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/FullSearch/itkFullSearchOptimizer.cxx -[ 76%] Linking CXX static library ../../../bin/libAdaptiveStochasticLBFGS-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticLBFGS.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticLBFGS.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdaptiveStochasticLBFGS-5.0.a CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -/usr/bin/ranlib ../../../bin/libAdaptiveStochasticLBFGS-5.0.a +[ 75%] Linking CXX static library ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o +/usr/bin/ranlib ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 76%] Built target AdaptiveStochasticLBFGS +[ 75%] Built target AdaptiveStochasticVarianceReducedGradient make -f Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/build.make Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Resamplers/MyStandardResampler /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/build.make Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 76%] Building CXX object Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o +[ 75%] Building CXX object Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o -MF CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o.d -o CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o -c /build/elastix-5.0.1/Components/Resamplers/MyStandardResampler/elxMyStandardResampler.cxx -[ 76%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx -[ 76%] Linking CXX static library ../../../bin/libFullSearch-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/cmake -P CMakeFiles/FullSearch.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/cmake -E cmake_link_script CMakeFiles/FullSearch.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libFullSearch-5.0.a CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -/usr/bin/ranlib ../../../bin/libFullSearch-5.0.a +[ 75%] Linking CXX static library ../../../bin/libStandardGradientDescent-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/cmake -P CMakeFiles/StandardGradientDescent.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardGradientDescent.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libStandardGradientDescent-5.0.a CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o +/usr/bin/ranlib ../../../bin/libStandardGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 76%] Built target FullSearch +[ 75%] Built target StandardGradientDescent make -f Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/build.make Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/AdvancedAffineTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/build.make Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 77%] Building CXX object Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o +[ 76%] Building CXX object Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o -MF CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o.d -o CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/AdvancedAffineTransform/elxAdvancedAffineTransform.cxx -[ 78%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx -[ 78%] Linking CXX static library ../../../bin/libFixedSmoothingPyramid-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/cmake -P CMakeFiles/FixedSmoothingPyramid.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedSmoothingPyramid.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libFixedSmoothingPyramid-5.0.a CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o -/usr/bin/ranlib ../../../bin/libFixedSmoothingPyramid-5.0.a +[ 77%] Linking CXX static library ../../../bin/libMovingSmoothingPyramid-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid && /usr/bin/cmake -P CMakeFiles/MovingSmoothingPyramid.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingSmoothingPyramid.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libMovingSmoothingPyramid-5.0.a CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o +/usr/bin/ranlib ../../../bin/libMovingSmoothingPyramid-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 78%] Built target FixedSmoothingPyramid +[ 77%] Built target MovingSmoothingPyramid make -f Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/build.make Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/AdvancedBSplineTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/build.make Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 79%] Building CXX object Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o +[ 78%] Building CXX object Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o -MF CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o.d -o CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/AdvancedBSplineTransform/elxAdvancedBSplineTransform.cxx -[ 79%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkStochasticVarianceReducedGradientDescentOptimizer.cxx -[ 79%] Linking CXX static library ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -/usr/bin/ranlib ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a +[ 79%] Linking CXX static library ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/cmake -P CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o +/usr/bin/ranlib ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 79%] Built target AdaptiveStochasticVarianceReducedGradient +[ 79%] Built target KNNGraphAlphaMutualInformationMetric make -f Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/build.make Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/AffineLogStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/DependInfo.cmake --color= @@ -2801,34 +2849,21 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o -MF CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o.d -o CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/AffineLogStackTransform/elxAffineLogStackTransform.cxx -[ 80%] Linking CXX static library ../../../bin/libTransformRigidityPenalty-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/cmake -P CMakeFiles/TransformRigidityPenalty.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformRigidityPenalty.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libTransformRigidityPenalty-5.0.a CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o -/usr/bin/ranlib ../../../bin/libTransformRigidityPenalty-5.0.a -[ 81%] Linking CXX static library ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/cmake -P CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o -/usr/bin/ranlib ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 81%] Building CXX object Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -MF CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o.d -o CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/FullSearch/itkFullSearchOptimizer.cxx +[ 81%] Linking CXX static library ../../../bin/libFullSearch-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/cmake -P CMakeFiles/FullSearch.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/cmake -E cmake_link_script CMakeFiles/FullSearch.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libFullSearch-5.0.a CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o +/usr/bin/ranlib ../../../bin/libFullSearch-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 81%] Built target TransformRigidityPenalty -[ 81%] Built target ReducedDimensionBSplineResampleInterpolator +[ 81%] Built target FullSearch make -f Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/build.make Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/depend -make -f Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build.make Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/depend -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/DeformationFieldTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/BSplineStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build.make Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/build.make Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 81%] Building CXX object Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o -MF CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o.d -o CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/DeformationFieldTransform/elxDeformationFieldTransform.cxx [ 81%] Building CXX object Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o -MF CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o.d -o CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/BSplineStackTransform/elxBSplineStackTransform.cxx [ 82%] Linking CXX static library ../../../bin/libBSplineResampleInterpolator-5.0.a @@ -2838,102 +2873,110 @@ /usr/bin/ranlib ../../../bin/libBSplineResampleInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 82%] Built target BSplineResampleInterpolator +make -f Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build.make Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/depend +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/DeformationFieldTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make -f Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build.make Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 82%] Building CXX object Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o -MF CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o.d -o CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/DeformationFieldTransform/elxDeformationFieldTransform.cxx +[ 83%] Linking CXX static library ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/cmake -P CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o +/usr/bin/ranlib ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 83%] Built target ReducedDimensionBSplineResampleInterpolator make -f Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/build.make Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/EulerStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/build.make Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 83%] Building CXX object Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o +[ 84%] Building CXX object Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o -MF CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o.d -o CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/EulerStackTransform/elxEulerStackTransform.cxx -[ 83%] Linking CXX static library ../../../bin/libFixedRecursivePyramid-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/cmake -P CMakeFiles/FixedRecursivePyramid.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedRecursivePyramid.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libFixedRecursivePyramid-5.0.a CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o -/usr/bin/ranlib ../../../bin/libFixedRecursivePyramid-5.0.a +[ 84%] Linking CXX static library ../../../bin/libFixedSmoothingPyramid-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/cmake -P CMakeFiles/FixedSmoothingPyramid.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedSmoothingPyramid.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libFixedSmoothingPyramid-5.0.a CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o +/usr/bin/ranlib ../../../bin/libFixedSmoothingPyramid-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 83%] Built target FixedRecursivePyramid +[ 84%] Built target FixedSmoothingPyramid make -f Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/build.make Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/EulerTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/build.make Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 83%] Building CXX object Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o +[ 84%] Building CXX object Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o -MF CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o.d -o CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/EulerTransform/elxEulerTransform.cxx -[ 84%] Linking CXX static library ../../../bin/libFixedGenericPyramid-5.0.a +[ 84%] Linking CXX static library ../../../bin/libFixedRecursivePyramid-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/cmake -P CMakeFiles/FixedRecursivePyramid.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedRecursivePyramid.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libFixedRecursivePyramid-5.0.a CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o +[ 85%] Linking CXX static library ../../../bin/libFixedGenericPyramid-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid && /usr/bin/cmake -P CMakeFiles/FixedGenericPyramid.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedGenericPyramid.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFixedGenericPyramid-5.0.a CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o +[ 85%] Linking CXX static library ../../../bin/libDistancePreservingRigidityPenalty-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/cmake -P CMakeFiles/DistancePreservingRigidityPenalty.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistancePreservingRigidityPenalty.dir/link.txt --verbose=1 +/usr/bin/ranlib ../../../bin/libFixedRecursivePyramid-5.0.a +/usr/bin/ar qc ../../../bin/libDistancePreservingRigidityPenalty-5.0.a CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o /usr/bin/ranlib ../../../bin/libFixedGenericPyramid-5.0.a +/usr/bin/ranlib ../../../bin/libDistancePreservingRigidityPenalty-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 84%] Built target FixedGenericPyramid +[ 85%] Built target FixedRecursivePyramid make -f Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/build.make Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/RecursiveBSplineTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/RecursiveBSplineTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/build.make Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 84%] Building CXX object Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/RecursiveBSplineTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o -MF CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o.d -o CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/RecursiveBSplineTransform/elxRecursiveBSplineTransform.cxx -[ 85%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/PreconditionedStochasticGradientDescent/itkPreconditionedASGDOptimizer.cxx -[ 85%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx -[ 86%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx -[ 86%] Linking CXX static library ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/cmake -P CMakeFiles/PreconditionedStochasticGradientDescent.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/PreconditionedStochasticGradientDescent.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -/usr/bin/ranlib ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 86%] Built target PreconditionedStochasticGradientDescent +[ 85%] Building CXX object Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/RecursiveBSplineTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/RecursiveBSplineTransform/CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o -MF CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o.d -o CMakeFiles/RecursiveBSplineTransform.dir/elxRecursiveBSplineTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/RecursiveBSplineTransform/elxRecursiveBSplineTransform.cxx +[ 85%] Built target FixedGenericPyramid make -f Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/build.make Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/SplineKernelTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/SplineKernelTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/build.make Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 86%] Building CXX object Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/elxSplineKernelTransform.cxx.o +[ 85%] Building CXX object Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/elxSplineKernelTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/SplineKernelTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/SplineKernelTransform/CMakeFiles/SplineKernelTransform.dir/elxSplineKernelTransform.cxx.o -MF CMakeFiles/SplineKernelTransform.dir/elxSplineKernelTransform.cxx.o.d -o CMakeFiles/SplineKernelTransform.dir/elxSplineKernelTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/SplineKernelTransform/elxSplineKernelTransform.cxx -[ 86%] Linking CXX static library ../../../bin/libMovingGenericPyramid-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/cmake -P CMakeFiles/MovingGenericPyramid.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingGenericPyramid.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libMovingGenericPyramid-5.0.a CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o -/usr/bin/ranlib ../../../bin/libMovingGenericPyramid-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 86%] Built target MovingGenericPyramid +[ 85%] Built target DistancePreservingRigidityPenalty make -f Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/build.make Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/TranslationStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationStackTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/build.make Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 87%] Building CXX object Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/elxTranslationStackTransform.cxx.o +[ 86%] Building CXX object Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/elxTranslationStackTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationStackTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/TranslationStackTransform/CMakeFiles/TranslationStackTransform.dir/elxTranslationStackTransform.cxx.o -MF CMakeFiles/TranslationStackTransform.dir/elxTranslationStackTransform.cxx.o.d -o CMakeFiles/TranslationStackTransform.dir/elxTranslationStackTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/TranslationStackTransform/elxTranslationStackTransform.cxx -[ 87%] Linking CXX static library ../../../bin/libMovingRecursivePyramid-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/cmake -P CMakeFiles/MovingRecursivePyramid.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingRecursivePyramid.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libMovingRecursivePyramid-5.0.a CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o -[ 88%] Linking CXX static library ../../../bin/libMovingSmoothingPyramid-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid && /usr/bin/cmake -P CMakeFiles/MovingSmoothingPyramid.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingSmoothingPyramid.dir/link.txt --verbose=1 -/usr/bin/ranlib ../../../bin/libMovingRecursivePyramid-5.0.a -/usr/bin/ar qc ../../../bin/libMovingSmoothingPyramid-5.0.a CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o +[ 87%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/PreconditionedStochasticGradientDescent/itkPreconditionedASGDOptimizer.cxx +[ 87%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx +[ 88%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx +[ 88%] Linking CXX static library ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/cmake -P CMakeFiles/PreconditionedStochasticGradientDescent.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/PreconditionedStochasticGradientDescent.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o +/usr/bin/ranlib ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 88%] Built target MovingRecursivePyramid +[ 88%] Built target PreconditionedStochasticGradientDescent make -f Components/Transforms/TranslationTransform/CMakeFiles/TranslationTransformElastix.dir/build.make Components/Transforms/TranslationTransform/CMakeFiles/TranslationTransformElastix.dir/depend make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Components/Transforms/TranslationTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationTransform /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationTransform/CMakeFiles/TranslationTransformElastix.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -/usr/bin/ranlib ../../../bin/libMovingSmoothingPyramid-5.0.a make -f Components/Transforms/TranslationTransform/CMakeFiles/TranslationTransformElastix.dir/build.make Components/Transforms/TranslationTransform/CMakeFiles/TranslationTransformElastix.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 88%] Building CXX object Components/Transforms/TranslationTransform/CMakeFiles/TranslationTransformElastix.dir/elxTranslationTransform.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/TranslationTransform/CMakeFiles/TranslationTransformElastix.dir/elxTranslationTransform.cxx.o -MF CMakeFiles/TranslationTransformElastix.dir/elxTranslationTransform.cxx.o.d -o CMakeFiles/TranslationTransformElastix.dir/elxTranslationTransform.cxx.o -c /build/elastix-5.0.1/Components/Transforms/TranslationTransform/elxTranslationTransform.cxx -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 88%] Built target MovingSmoothingPyramid [ 88%] Linking CXX static library ../../../bin/libMultiResolutionRegistration-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration && /usr/bin/cmake -P CMakeFiles/MultiResolutionRegistration.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiResolutionRegistration.dir/link.txt --verbose=1 @@ -2955,20 +2998,27 @@ /usr/bin/ranlib ../../../bin/libMultiResolutionRegistrationWithFeatures-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 89%] Built target MultiResolutionRegistrationWithFeatures +[ 89%] Linking CXX static library ../../../bin/libAffineLogStackTransform-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/cmake -P CMakeFiles/AffineLogStackTransform.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/AffineLogStackTransform.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAffineLogStackTransform-5.0.a CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o +/usr/bin/ranlib ../../../bin/libAffineLogStackTransform-5.0.a +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 89%] Built target AffineLogStackTransform [ 89%] Linking CXX static library ../../../bin/libMultiMetricMultiResolutionRegistration-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration && /usr/bin/cmake -P CMakeFiles/MultiMetricMultiResolutionRegistration.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiMetricMultiResolutionRegistration.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMultiMetricMultiResolutionRegistration-5.0.a CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o +[ 89%] Linking CXX static library ../../../bin/libTranslationStackTransform-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationStackTransform && /usr/bin/cmake -P CMakeFiles/TranslationStackTransform.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/TranslationStackTransform.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libTranslationStackTransform-5.0.a CMakeFiles/TranslationStackTransform.dir/elxTranslationStackTransform.cxx.o /usr/bin/ranlib ../../../bin/libMultiMetricMultiResolutionRegistration-5.0.a +/usr/bin/ranlib ../../../bin/libTranslationStackTransform-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 89%] Built target MultiMetricMultiResolutionRegistration -[ 89%] Linking CXX static library ../../../bin/libAffineLogStackTransform-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/cmake -P CMakeFiles/AffineLogStackTransform.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/AffineLogStackTransform.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAffineLogStackTransform-5.0.a CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o -/usr/bin/ranlib ../../../bin/libAffineLogStackTransform-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 89%] Built target AffineLogStackTransform +[ 89%] Built target TranslationStackTransform [ 89%] Linking CXX static library ../../../bin/libDeformationFieldTransform-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform && /usr/bin/cmake -P CMakeFiles/DeformationFieldTransform.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformationFieldTransform.dir/link.txt --verbose=1 @@ -2983,55 +3033,48 @@ /usr/bin/ranlib ../../../bin/libEulerStackTransform-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 89%] Built target EulerStackTransform -[ 89%] Linking CXX static library ../../../bin/libAdvancedAffineTransformElastix-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/cmake -P CMakeFiles/AdvancedAffineTransformElastix.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedAffineTransformElastix.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libAdvancedAffineTransformElastix-5.0.a CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o -/usr/bin/ranlib ../../../bin/libAdvancedAffineTransformElastix-5.0.a -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 89%] Built target AdvancedAffineTransformElastix +[ 89%] Linking CXX static library ../../../bin/libSplineKernelTransform-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/SplineKernelTransform && /usr/bin/cmake -P CMakeFiles/SplineKernelTransform.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/SplineKernelTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/SplineKernelTransform.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libSplineKernelTransform-5.0.a CMakeFiles/SplineKernelTransform.dir/elxSplineKernelTransform.cxx.o [ 90%] Linking CXX static library ../../../bin/libEulerTransformElastix-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform && /usr/bin/cmake -P CMakeFiles/EulerTransformElastix.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/EulerTransformElastix.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libEulerTransformElastix-5.0.a CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o +/usr/bin/ranlib ../../../bin/libSplineKernelTransform-5.0.a /usr/bin/ranlib ../../../bin/libEulerTransformElastix-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 90%] Built target SplineKernelTransform +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [ 90%] Built target EulerTransformElastix -[ 90%] Linking CXX static library ../../../bin/libTranslationStackTransform-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationStackTransform && /usr/bin/cmake -P CMakeFiles/TranslationStackTransform.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/TranslationStackTransform.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libTranslationStackTransform-5.0.a CMakeFiles/TranslationStackTransform.dir/elxTranslationStackTransform.cxx.o -/usr/bin/ranlib ../../../bin/libTranslationStackTransform-5.0.a -[ 90%] Linking CXX static library ../../../bin/libSplineKernelTransform-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/SplineKernelTransform && /usr/bin/cmake -P CMakeFiles/SplineKernelTransform.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/SplineKernelTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/SplineKernelTransform.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libSplineKernelTransform-5.0.a CMakeFiles/SplineKernelTransform.dir/elxSplineKernelTransform.cxx.o +[ 90%] Linking CXX static library ../../../bin/libAdvancedAffineTransformElastix-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/cmake -P CMakeFiles/AdvancedAffineTransformElastix.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedAffineTransformElastix.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libAdvancedAffineTransformElastix-5.0.a CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o +/usr/bin/ranlib ../../../bin/libAdvancedAffineTransformElastix-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 90%] Built target TranslationStackTransform -/usr/bin/ranlib ../../../bin/libSplineKernelTransform-5.0.a +[ 90%] Built target AdvancedAffineTransformElastix +[ 91%] Linking CXX static library ../../../bin/libTranslationTransformElastix-5.0.a +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationTransform && /usr/bin/cmake -P CMakeFiles/TranslationTransformElastix.dir/cmake_clean_target.cmake +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/TranslationTransformElastix.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../bin/libTranslationTransformElastix-5.0.a CMakeFiles/TranslationTransformElastix.dir/elxTranslationTransform.cxx.o +/usr/bin/ranlib ../../../bin/libTranslationTransformElastix-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 90%] Built target SplineKernelTransform -[ 90%] Linking CXX static library ../../../bin/libAdvancedBSplineTransform-5.0.a +[ 91%] Built target TranslationTransformElastix +[ 91%] Linking CXX static library ../../../bin/libAdvancedBSplineTransform-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform && /usr/bin/cmake -P CMakeFiles/AdvancedBSplineTransform.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedBSplineTransform.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdvancedBSplineTransform-5.0.a CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o /usr/bin/ranlib ../../../bin/libAdvancedBSplineTransform-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 90%] Built target AdvancedBSplineTransform -[ 91%] Linking CXX static library ../../../bin/libBSplineStackTransform-5.0.a +[ 91%] Built target AdvancedBSplineTransform +[ 92%] Linking CXX static library ../../../bin/libBSplineStackTransform-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform && /usr/bin/cmake -P CMakeFiles/BSplineStackTransform.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineStackTransform.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libBSplineStackTransform-5.0.a CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o /usr/bin/ranlib ../../../bin/libBSplineStackTransform-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 91%] Built target BSplineStackTransform -[ 92%] Linking CXX static library ../../../bin/libTranslationTransformElastix-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationTransform && /usr/bin/cmake -P CMakeFiles/TranslationTransformElastix.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/TranslationTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/TranslationTransformElastix.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../bin/libTranslationTransformElastix-5.0.a CMakeFiles/TranslationTransformElastix.dir/elxTranslationTransform.cxx.o -/usr/bin/ranlib ../../../bin/libTranslationTransformElastix-5.0.a -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 92%] Built target TranslationTransformElastix +[ 92%] Built target BSplineStackTransform [ 92%] Linking CXX static library ../../../bin/libRecursiveBSplineTransform-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/RecursiveBSplineTransform && /usr/bin/cmake -P CMakeFiles/RecursiveBSplineTransform.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/RecursiveBSplineTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/RecursiveBSplineTransform.dir/link.txt --verbose=1 @@ -3048,79 +3091,79 @@ make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core/CMakeFiles/transformix_exe.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core/CMakeFiles/transformix_lib.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core/CMakeFiles/elastix_exe.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-5.0.1 /build/elastix-5.0.1/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core/CMakeFiles/transformix_lib.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Core/CMakeFiles/elastix_lib.dir/build.make Core/CMakeFiles/elastix_lib.dir/build make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make -f Core/CMakeFiles/transformix_exe.dir/build.make Core/CMakeFiles/transformix_exe.dir/build -make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Core/CMakeFiles/elastix_exe.dir/build.make Core/CMakeFiles/elastix_exe.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +make -f Core/CMakeFiles/transformix_exe.dir/build.make Core/CMakeFiles/transformix_exe.dir/build make -f Core/CMakeFiles/transformix_lib.dir/build.make Core/CMakeFiles/transformix_lib.dir/build make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[ 92%] Building CXX object Core/CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DELX_CMAKE_VERSION=\"3.25.1\" -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o -MF CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o.d -o CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o -c /build/elastix-5.0.1/Core/Main/elastixlib.cxx +make[3]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' +[ 92%] Building CXX object Core/CMakeFiles/elastix_exe.dir/Main/elastix.cxx.o [ 93%] Building CXX object Core/CMakeFiles/elastix_lib.dir/Main/elxParameterObject.cxx.o -[ 94%] Building CXX object Core/CMakeFiles/transformix_exe.dir/Main/transformix.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DELX_CMAKE_VERSION=\"3.25.1\" -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elastix_lib.dir/Main/elxParameterObject.cxx.o -MF CMakeFiles/elastix_lib.dir/Main/elxParameterObject.cxx.o.d -o CMakeFiles/elastix_lib.dir/Main/elxParameterObject.cxx.o -c /build/elastix-5.0.1/Core/Main/elxParameterObject.cxx -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG 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-I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms 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/usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/transformix_exe.dir/Kernel/elxElastixMain.cxx.o -MF CMakeFiles/transformix_exe.dir/Kernel/elxElastixMain.cxx.o.d -o CMakeFiles/transformix_exe.dir/Kernel/elxElastixMain.cxx.o -c /build/elastix-5.0.1/Core/Kernel/elxElastixMain.cxx -[ 97%] Building CXX object Core/CMakeFiles/elastix_exe.dir/Install/elxComponentLoader.cxx.o +[ 93%] Building CXX object Core/CMakeFiles/elastix_lib.dir/Kernel/elxElastixMain.cxx.o +[ 93%] Building CXX object Core/CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DELX_CMAKE_VERSION=\"3.25.1\" -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers 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Core/CMakeFiles/transformix_lib.dir/Main/transformixlib.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids 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/build/elastix-5.0.1/Core/Main/elxParameterObject.cxx -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers 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Building CXX object Core/CMakeFiles/transformix_exe.dir/Main/transformix.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/transformix_exe.dir/Main/transformix.cxx.o -MF CMakeFiles/transformix_exe.dir/Main/transformix.cxx.o.d -o CMakeFiles/transformix_exe.dir/Main/transformix.cxx.o -c /build/elastix-5.0.1/Core/Main/transformix.cxx +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DELX_CMAKE_VERSION=\"3.25.1\" -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o -MF CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o.d -o CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o -c /build/elastix-5.0.1/Core/Main/elastixlib.cxx cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DELX_CMAKE_VERSION=\"3.25.1\" -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics 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Core/CMakeFiles/transformix_lib.dir/Kernel/elxElastixMain.cxx.o -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/transformix_lib.dir/Main/transformixlib.cxx.o -MF CMakeFiles/transformix_lib.dir/Main/transformixlib.cxx.o.d -o CMakeFiles/transformix_lib.dir/Main/transformixlib.cxx.o -c /build/elastix-5.0.1/Core/Main/transformixlib.cxx +[ 94%] Building CXX object Core/CMakeFiles/elastix_exe.dir/Kernel/elxElastixMain.cxx.o +[ 95%] Building CXX object Core/CMakeFiles/elastix_lib.dir/Install/elxComponentLoader.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DELX_CMAKE_VERSION=\"3.25.1\" -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elastix_exe.dir/Kernel/elxElastixMain.cxx.o -MF CMakeFiles/elastix_exe.dir/Kernel/elxElastixMain.cxx.o.d -o CMakeFiles/elastix_exe.dir/Kernel/elxElastixMain.cxx.o -c /build/elastix-5.0.1/Core/Kernel/elxElastixMain.cxx -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/transformix_exe.dir/Install/elxComponentLoader.cxx.o -MF CMakeFiles/transformix_exe.dir/Install/elxComponentLoader.cxx.o.d -o CMakeFiles/transformix_exe.dir/Install/elxComponentLoader.cxx.o -c /build/elastix-5.0.1/Core/Install/elxComponentLoader.cxx +[ 96%] Building CXX object Core/CMakeFiles/transformix_lib.dir/Main/elxParameterObject.cxx.o +[ 97%] Building CXX object Core/CMakeFiles/transformix_lib.dir/Kernel/elxElastixMain.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions -I/build/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong 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-I/build/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-5.0.1/Common/Transforms -I/build/elastix-5.0.1/Common/xout -I/build/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-5.0.1/Core -I/build/elastix-5.0.1/Core/Install -I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elastix_lib.dir/Install/elxComponentLoader.cxx.o -MF CMakeFiles/elastix_lib.dir/Install/elxComponentLoader.cxx.o.d -o CMakeFiles/elastix_lib.dir/Install/elxComponentLoader.cxx.o -c /build/elastix-5.0.1/Core/Install/elxComponentLoader.cxx +[ 97%] Building CXX object Core/CMakeFiles/transformix_lib.dir/Kernel/elxTransformixMain.cxx.o cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME -I/build/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/elastix-5.0.1/Common -I/build/elastix-5.0.1/Common/CostFunctions 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-I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/transformix_lib.dir/Kernel/elxTransformixMain.cxx.o -MF CMakeFiles/transformix_lib.dir/Kernel/elxTransformixMain.cxx.o.d -o CMakeFiles/transformix_lib.dir/Kernel/elxTransformixMain.cxx.o -c /build/elastix-5.0.1/Core/Kernel/elxTransformixMain.cxx +[ 97%] Building CXX object Core/CMakeFiles/transformix_lib.dir/Main/transformixlib.cxx.o +[ 97%] Building CXX object Core/CMakeFiles/transformix_exe.dir/Kernel/elxElastixMain.cxx.o +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DHDF_NO_NAMESPACE -DITK_IO_FACTORY_REGISTER_MANAGER -DNO_STATIC_CAST -DOLD_HEADER_FILENAME 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-I/build/elastix-5.0.1/Core/Kernel -I/build/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-5.0.1/Core/Configuration -I/build/elastix-5.0.1/Core/Main -I/build/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-5.0.1/Components/Interpolators -I/build/elastix-5.0.1/Components/Metrics -I/build/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-5.0.1/Components/Optimizers -I/build/elastix-5.0.1/Components/Registrations -I/build/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-5.0.1/Components/Resamplers -I/build/elastix-5.0.1/Components/Transforms -I/build/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT 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99%] Linking CXX executable ../bin/elastix +cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/elastix_exe.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elastix_exe.dir/Main/elastix.cxx.o CMakeFiles/elastix_exe.dir/Kernel/elxElastixMain.cxx.o CMakeFiles/elastix_exe.dir/Install/elxComponentLoader.cxx.o -o ../bin/elastix -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libxoutlib-5.0.a ../bin/libelxCommon-5.0.a ../bin/libelxCore-5.0.a ../bin/libmevisdcmtiff-5.0.a ../bin/libFixedGenericPyramid-5.0.a ../bin/libFixedRecursivePyramid-5.0.a ../bin/libFixedSmoothingPyramid-5.0.a ../bin/libFullSampler-5.0.a ../bin/libGridSampler-5.0.a ../bin/libMultiInputRandomCoordinateSampler-5.0.a ../bin/libRandomSampler-5.0.a ../bin/libRandomCoordinateSampler-5.0.a ../bin/libRandomSamplerSparseMask-5.0.a ../bin/libBSplineInterpolator-5.0.a ../bin/libLinearInterpolator-5.0.a ../bin/libReducedDimensionBSplineInterpolator-5.0.a ../bin/libAdvancedMattesMutualInformationMetric-5.0.a ../bin/libAdvancedMeanSquaresMetric-5.0.a ../bin/libAdvancedNormalizedCorrelationMetric-5.0.a ../bin/libTransformBendingEnergyPenalty-5.0.a ../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a ../bin/libDistancePreservingRigidityPenalty-5.0.a ../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a ../bin/libNormalizedMutualInformationMetric-5.0.a ../bin/libPCAMetric-5.0.a ../bin/libPCAMetric2-5.0.a ../bin/libTransformRigidityPenalty-5.0.a ../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a ../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a ../bin/libVarianceOverLastDimensionMetric-5.0.a ../bin/libMovingGenericPyramid-5.0.a ../bin/libMovingRecursivePyramid-5.0.a ../bin/libMovingSmoothingPyramid-5.0.a ../bin/libAdaGrad-5.0.a ../bin/libAdaptiveStochasticGradientDescent-5.0.a ../bin/libAdaptiveStochasticLBFGS-5.0.a ../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a ../bin/libConjugateGradient-5.0.a ../bin/libFiniteDifferenceGradientDescent-5.0.a ../bin/libFullSearch-5.0.a ../bin/libPowell-5.0.a ../bin/libPreconditionedStochasticGradientDescent-5.0.a ../bin/libQuasiNewtonLBFGS-5.0.a ../bin/libRegularStepGradientDescent-5.0.a ../bin/libStandardGradientDescent-5.0.a ../bin/libMultiMetricMultiResolutionRegistration-5.0.a ../bin/libMultiResolutionRegistration-5.0.a ../bin/libMultiResolutionRegistrationWithFeatures-5.0.a ../bin/libBSplineResampleInterpolator-5.0.a ../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a ../bin/libMyStandardResampler-5.0.a ../bin/libAdvancedAffineTransformElastix-5.0.a ../bin/libAdvancedBSplineTransform-5.0.a ../bin/libAffineLogStackTransform-5.0.a ../bin/libBSplineStackTransform-5.0.a ../bin/libDeformationFieldTransform-5.0.a 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/usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm [100%] Linking CXX static library ../bin/libtransformix-5.0.a cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -P CMakeFiles/transformix_lib.dir/cmake_clean_target.cmake cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/transformix_lib.dir/link.txt --verbose=1 -[100%] Linking CXX executable ../bin/elastix -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/elastix_exe.dir/link.txt --verbose=1 /usr/bin/ar qc ../bin/libtransformix-5.0.a CMakeFiles/transformix_lib.dir/Main/elxParameterObject.cxx.o CMakeFiles/transformix_lib.dir/Main/transformixlib.cxx.o CMakeFiles/transformix_lib.dir/Kernel/elxElastixMain.cxx.o CMakeFiles/transformix_lib.dir/Kernel/elxTransformixMain.cxx.o CMakeFiles/transformix_lib.dir/Install/elxComponentLoader.cxx.o -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elastix_exe.dir/Main/elastix.cxx.o CMakeFiles/elastix_exe.dir/Kernel/elxElastixMain.cxx.o CMakeFiles/elastix_exe.dir/Install/elxComponentLoader.cxx.o -o ../bin/elastix -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libxoutlib-5.0.a ../bin/libelxCommon-5.0.a ../bin/libelxCore-5.0.a ../bin/libmevisdcmtiff-5.0.a ../bin/libFixedGenericPyramid-5.0.a ../bin/libFixedRecursivePyramid-5.0.a ../bin/libFixedSmoothingPyramid-5.0.a ../bin/libFullSampler-5.0.a ../bin/libGridSampler-5.0.a ../bin/libMultiInputRandomCoordinateSampler-5.0.a ../bin/libRandomSampler-5.0.a ../bin/libRandomCoordinateSampler-5.0.a ../bin/libRandomSamplerSparseMask-5.0.a ../bin/libBSplineInterpolator-5.0.a ../bin/libLinearInterpolator-5.0.a ../bin/libReducedDimensionBSplineInterpolator-5.0.a ../bin/libAdvancedMattesMutualInformationMetric-5.0.a ../bin/libAdvancedMeanSquaresMetric-5.0.a ../bin/libAdvancedNormalizedCorrelationMetric-5.0.a ../bin/libTransformBendingEnergyPenalty-5.0.a ../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a ../bin/libDistancePreservingRigidityPenalty-5.0.a ../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a ../bin/libNormalizedMutualInformationMetric-5.0.a ../bin/libPCAMetric-5.0.a ../bin/libPCAMetric2-5.0.a ../bin/libTransformRigidityPenalty-5.0.a ../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a ../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a ../bin/libVarianceOverLastDimensionMetric-5.0.a ../bin/libMovingGenericPyramid-5.0.a ../bin/libMovingRecursivePyramid-5.0.a ../bin/libMovingSmoothingPyramid-5.0.a ../bin/libAdaGrad-5.0.a ../bin/libAdaptiveStochasticGradientDescent-5.0.a ../bin/libAdaptiveStochasticLBFGS-5.0.a ../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a ../bin/libConjugateGradient-5.0.a ../bin/libFiniteDifferenceGradientDescent-5.0.a ../bin/libFullSearch-5.0.a ../bin/libPowell-5.0.a ../bin/libPreconditionedStochasticGradientDescent-5.0.a ../bin/libQuasiNewtonLBFGS-5.0.a ../bin/libRegularStepGradientDescent-5.0.a ../bin/libStandardGradientDescent-5.0.a ../bin/libMultiMetricMultiResolutionRegistration-5.0.a ../bin/libMultiResolutionRegistration-5.0.a ../bin/libMultiResolutionRegistrationWithFeatures-5.0.a ../bin/libBSplineResampleInterpolator-5.0.a ../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a ../bin/libMyStandardResampler-5.0.a ../bin/libAdvancedAffineTransformElastix-5.0.a ../bin/libAdvancedBSplineTransform-5.0.a ../bin/libAffineLogStackTransform-5.0.a ../bin/libBSplineStackTransform-5.0.a ../bin/libDeformationFieldTransform-5.0.a ../bin/libEulerStackTransform-5.0.a ../bin/libEulerTransformElastix-5.0.a ../bin/libRecursiveBSplineTransform-5.0.a ../bin/libSplineKernelTransform-5.0.a ../bin/libTranslationStackTransform-5.0.a ../bin/libTranslationTransformElastix-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so -lofstd -loflog -ldcmdata 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/usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm /usr/bin/ranlib ../bin/libtransformix-5.0.a make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [100%] Built target transformix_lib [100%] Linking CXX executable ../bin/transformix cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/transformix_exe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/transformix_exe.dir/Main/transformix.cxx.o CMakeFiles/transformix_exe.dir/Kernel/elxElastixMain.cxx.o CMakeFiles/transformix_exe.dir/Kernel/elxTransformixMain.cxx.o CMakeFiles/transformix_exe.dir/Install/elxComponentLoader.cxx.o -o ../bin/transformix -L/usr/lib/x86_64-linux-gnu/lib ../bin/libparam-5.0.a ../bin/libxoutlib-5.0.a ../bin/libelxCommon-5.0.a ../bin/libelxCore-5.0.a ../bin/libmevisdcmtiff-5.0.a ../bin/libFixedGenericPyramid-5.0.a ../bin/libFixedRecursivePyramid-5.0.a ../bin/libFixedSmoothingPyramid-5.0.a ../bin/libFullSampler-5.0.a ../bin/libGridSampler-5.0.a ../bin/libMultiInputRandomCoordinateSampler-5.0.a ../bin/libRandomSampler-5.0.a ../bin/libRandomCoordinateSampler-5.0.a ../bin/libRandomSamplerSparseMask-5.0.a ../bin/libBSplineInterpolator-5.0.a ../bin/libLinearInterpolator-5.0.a ../bin/libReducedDimensionBSplineInterpolator-5.0.a ../bin/libAdvancedMattesMutualInformationMetric-5.0.a ../bin/libAdvancedMeanSquaresMetric-5.0.a ../bin/libAdvancedNormalizedCorrelationMetric-5.0.a ../bin/libTransformBendingEnergyPenalty-5.0.a ../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a ../bin/libDistancePreservingRigidityPenalty-5.0.a ../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a ../bin/libNormalizedMutualInformationMetric-5.0.a ../bin/libPCAMetric-5.0.a ../bin/libPCAMetric2-5.0.a ../bin/libTransformRigidityPenalty-5.0.a ../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a ../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a ../bin/libVarianceOverLastDimensionMetric-5.0.a ../bin/libMovingGenericPyramid-5.0.a ../bin/libMovingRecursivePyramid-5.0.a ../bin/libMovingSmoothingPyramid-5.0.a ../bin/libAdaGrad-5.0.a ../bin/libAdaptiveStochasticGradientDescent-5.0.a ../bin/libAdaptiveStochasticLBFGS-5.0.a ../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a ../bin/libConjugateGradient-5.0.a ../bin/libFiniteDifferenceGradientDescent-5.0.a ../bin/libFullSearch-5.0.a ../bin/libPowell-5.0.a ../bin/libPreconditionedStochasticGradientDescent-5.0.a ../bin/libQuasiNewtonLBFGS-5.0.a ../bin/libRegularStepGradientDescent-5.0.a ../bin/libStandardGradientDescent-5.0.a ../bin/libMultiMetricMultiResolutionRegistration-5.0.a ../bin/libMultiResolutionRegistration-5.0.a ../bin/libMultiResolutionRegistrationWithFeatures-5.0.a ../bin/libBSplineResampleInterpolator-5.0.a ../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a ../bin/libMyStandardResampler-5.0.a ../bin/libAdvancedAffineTransformElastix-5.0.a ../bin/libAdvancedBSplineTransform-5.0.a ../bin/libAffineLogStackTransform-5.0.a ../bin/libBSplineStackTransform-5.0.a ../bin/libDeformationFieldTransform-5.0.a ../bin/libEulerStackTransform-5.0.a ../bin/libEulerTransformElastix-5.0.a ../bin/libRecursiveBSplineTransform-5.0.a ../bin/libSplineKernelTransform-5.0.a ../bin/libTranslationStackTransform-5.0.a ../bin/libTranslationTransformElastix-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lminc2 -lm -lz -lm -ldl -lnetcdf ../bin/libKNNlib-5.0.a ../bin/libANNlib-5.0.so.1 ../bin/libelxCore-5.0.a ../bin/libparam-5.0.a ../bin/libxoutlib-5.0.a ../bin/libelxCommon-5.0.a -lrt /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 -lm -lz -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.21 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.21 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -[100%] Linking CXX static library ../bin/libelastix-5.0.a -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -P CMakeFiles/elastix_lib.dir/cmake_clean_target.cmake -cd /build/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/elastix_lib.dir/link.txt --verbose=1 -/usr/bin/ar qc ../bin/libelastix-5.0.a CMakeFiles/elastix_lib.dir/Main/elxParameterObject.cxx.o CMakeFiles/elastix_lib.dir/Main/elastixlib.cxx.o CMakeFiles/elastix_lib.dir/Kernel/elxElastixMain.cxx.o CMakeFiles/elastix_lib.dir/Install/elxComponentLoader.cxx.o -/usr/bin/ranlib ../bin/libelastix-5.0.a -make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' -[100%] Built target elastix_lib make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' [100%] Built target elastix_exe make[3]: Leaving directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' @@ -3131,7 +3174,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/elastix-5.0.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/elastix-5.0.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/elastix-5.0.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/elastix-5.0.1 -B/build/elastix-5.0.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -3219,8 +3262,8 @@ cd ${DOXDIR} ; \ doxygen help/doxyfile.out ; \ find help -name "*.md5" -delete -+ find . -name help -type d -+ sed s?/help?? +++ sed 's?/help??' +++ find . -name help -type d + DOXDIR=./obj-x86_64-linux-gnu + cd ./obj-x86_64-linux-gnu + doxygen help/doxyfile.out @@ -6885,11 +6928,6 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories rating dependency graph for directory OpenCLFixedGenericPyramid Generating dependency graph for directory OpenCLMovingGenericPyramid Generating dependency graph for directory OpenCLResampler @@ -6951,7 +6989,7 @@ writing tag file... Running plantuml with JAVA... Running dot... -Generating dot graphs using 17 parallel threads... +Generating dot graphs using 16 parallel threads... Running dot for graph 1/1082 Running dot for graph 2/1082 Running dot for graph 3/1082 @@ -7242,6 +7280,16 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories 26/1082 Running dot for graph 27/1082 Running dot for graph 28/1082 @@ -7640,6 +7688,7 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories g dot for graph 161/1082 Running dot for graph 162/1082 Running dot for graph 163/1082 @@ -8431,18 +8480,6 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories r graph 425/1082 Running dot for graph 426/1082 Running dot for graph 427/1082 @@ -8826,6 +8863,19 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories aph 557/1082 Running dot for graph 558/1082 Running dot for graph 559/1082 @@ -9223,7 +9273,6 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories 689/1082 Running dot for graph 690/1082 Running dot for graph 691/1082 @@ -9609,19 +9658,6 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories -Fontconfig error: No writable cache directories 1082 Running dot for graph 822/1082 Running dot for graph 823/1082 @@ -10031,6 +10067,13 @@ Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories +Fontconfig error: No writable cache directories Running dot for graph 954/1082 Running dot for graph 955/1082 @@ -12168,7 +12211,7 @@ Patching output file 2005/2005 lookup cache used 51146/65536 hits=506592 misses=55230 finished... -+ find help -name *.md5 -delete ++ find help -name '*.md5' -delete sed -ie 's/^%\\date{/\\date{'"03.11.2022"'/' dox/manual/manual.tex sed -ie 's/\\today/'"03.11.2022"'/' dox/manual/manual.tex cd dox/manual && latex manual && bibtex manual && latex manual && latex manual && latex manual && dvipdf manual @@ -14123,9 +14166,9 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'elastix-doc' in '../elastix-doc_5.0.1-4_all.deb'. -dpkg-deb: building package 'elastix-dbgsym' in '../elastix-dbgsym_5.0.1-4_amd64.deb'. dpkg-deb: building package 'elastix' in '../elastix_5.0.1-4_amd64.deb'. +dpkg-deb: building package 'elastix-dbgsym' in '../elastix-dbgsym_5.0.1-4_amd64.deb'. +dpkg-deb: building package 'elastix-doc' in '../elastix-doc_5.0.1-4_all.deb'. dpkg-genbuildinfo --build=binary -O../elastix_5.0.1-4_amd64.buildinfo dpkg-genchanges --build=binary -O../elastix_5.0.1-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -14133,12 +14176,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/943923/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3931243 and its subdirectories -I: Current time: Thu Jul 11 23:42:38 -12 2024 -I: pbuilder-time-stamp: 1720784558 +I: removing directory /srv/workspace/pbuilder/943923 and its subdirectories +I: Current time: Sat Jun 10 21:37:49 +14 2023 +I: pbuilder-time-stamp: 1686382669