Diff of the two buildlogs: -- --- b1/build.log 2024-01-09 00:42:34.352348996 +0000 +++ b2/build.log 2024-01-09 00:44:10.888105016 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Jan 8 12:37:40 -12 2024 -I: pbuilder-time-stamp: 1704760660 +I: Current time: Mon Feb 10 21:05:46 +14 2025 +I: pbuilder-time-stamp: 1739171146 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -39,49 +39,81 @@ dpkg-source: info: applying fix_gd2_deprecation I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2273998/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 10 07:05 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='5fd0acaeef8e4312b830f94e6030f2ec' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2273998' - PS1='# ' - PS2='> ' + INVOCATION_ID=e584485d1458486d843b2c4f36c4eb75 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3023258 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.P7lpKWL9/pbuilderrc_RSWo --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.P7lpKWL9/b1 --logfile b1/build.log gbrowse_2.56+dfsg-11.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.P7lpKWL9/pbuilderrc_j8yV --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.P7lpKWL9/b2 --logfile b2/build.log gbrowse_2.56+dfsg-11.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos11-amd64 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.5.0-0.deb12.4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.5.10-1~bpo12+1 (2023-11-23) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash @@ -139,15 +171,15 @@ -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Jul 28 23:46 run-parts + -rwxr-xr-x 1 root root 27560 Jul 28 2023 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash + lrwxrwxrwx 1 root root 9 Feb 10 07:05 sh -> /bin/bash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 23 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar - -rwxr-xr-x 1 root root 14520 Jul 28 23:46 tempfile + -rwxr-xr-x 1 root root 14520 Jul 28 2023 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 23 2023 ulockmgr_server @@ -167,7 +199,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/2273998/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -434,7 +466,7 @@ Get: 180 http://deb.debian.org/debian bookworm/main amd64 libvm-ec2-perl all 1.28-4 [760 kB] Get: 181 http://deb.debian.org/debian bookworm/main amd64 rename all 2.01-1 [21.0 kB] Get: 182 http://deb.debian.org/debian bookworm/main amd64 sqlite3 amd64 3.40.1-2 [353 kB] -Fetched 57.0 MB in 13s (4339 kB/s) +Fetched 57.0 MB in 1s (48.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18148 files and directories currently installed.) @@ -1198,7 +1230,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/gbrowse-2.56+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gbrowse_2.56+dfsg-11_source.changes +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bookworm +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/gbrowse-2.56+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../gbrowse_2.56+dfsg-11_source.changes dpkg-buildpackage: info: source package gbrowse dpkg-buildpackage: info: source version 2.56+dfsg-11 dpkg-buildpackage: info: source distribution unstable @@ -1616,6 +1652,7 @@ Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781. Use of uninitialized value $_[5] in pack at /usr/share/perl5/Bio/DB/IndexedBase.pm line 1005, line 2. Use of uninitialized value $_[5] in pack at /usr/share/perl5/Bio/DB/IndexedBase.pm line 1005, line 2. +cannot remove directory for /tmp/gbrowse_testing/CynFF3yHHe: No such file or directory at /usr/lib/x86_64-linux-gnu/perl-base/File/Temp.pm line 917. t/03.render.t ............. 1..150 ok 1 @@ -1784,6 +1821,15 @@ Use of uninitialized value $curr_line in pattern match (m//) at /usr/share/perl5/Bio/DB/IndexedBase.pm line 781. Can't locate object method "png" via package "PNG  + IHDRzEPLTE޳( pHYs+IIDATxZ[v # d8MՀ8h1Nf +1 g;PP.wבg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWgxр"93d1rYq| _ _7.gMqaL@?[n ߵ>-0O.0,əp"LɡЯOkڡ-ӌRkzŰԀHލn> MQ3X!ZG$*U72_ۣǓLOx?zCru{xRo7s-r2zKՂr<8txĩOܹ{G]X5z_l9bZ$UOSxN#UގS*GTU8UWMiN8uYKF+TWg-Upu-.pK~sÛgd<8룑g-Kmw uQf7% &i`=^֪=XeK_OzcSv_WꅪaܩzL?PoWu% kk^ۿ޾b]MX ojx^ g}>g8Pܙ>7~_mVq((>;w-IwmV/]kꕬU=UO;!YzwC˃VT=U gOi]rQZ9ʡ\TVr((UCAX/CIӮ9IENDB`" (perhaps you forgot to load "PNG + + IHDRzEPLTE޳( pHYs+IIDATxZ[v # d8MՀ8h1Nf +1 g;PP.wבg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWgxр"93d1rYq| _ _7.gMqaL@?[n ߵ>-0O.0,əp"LɡЯOkڡ-ӌRkzŰԀHލn> MQ3X!ZG$*U72_ۣǓLOx?zCru{xRo7s-r2zKՂr<8txĩOܹ{G]X5z_l9bZ$UOSxN#UގS*GTU8UWMiN8uYKF+TWg-Upu-.pK~sÛgd<8룑g-Kmw uQf7% &i`=^֪=XeK_OzcSv_WꅪaܩzL?PoWu% kk^ۿ޾b]MX ojx^ g}>g8Pܙ>7~_mVq((>;w-IwmV/]kꕬU=UO;!YzwC˃VT=U gOi]rQZ9ʡ\TVr((UCAX/CIӮ9IENDB`"?) at /build/reproducible-path/gbrowse-2.56+dfsg/t/../lib/Bio/Graphics/Browser2/CachedTrack.pm line 154, <> line 45. +Can't locate object method "png" via package "PNG + IHDRzEPLTE޳|3C pHYs+IDATx n -qHDoнĘd:f7&* oCA<.ZRljFq%QzjIi'ZRljFq%QzjIi'ZRljFq%QzjIi'ZRljFq%QzjIi'y΂sW+T9}ڊK?C[V7{[~OmzYkXzUݯQؚɏ(6y!:kLx;pN7:VM*zb^&1L1]$fMt )Im6OK-e:s. #3Ӌ-⺌ @)D/ @@ -1797,15 +1843,6 @@ ksn^{busl^"%=;l=Jl-VVzfCo Kakt]t]e:^Ȼ)ޯ]zNxkhymmu{'ru]K8޾ ⡠^QU-)DUKJ8QŨ.ZG$^Sg8zǁ5׿UtqwǫzN}"LJO)=SzQxw0[<+yWһ!EU+=xHxuQJO)+^]T>uI Ez(론^^zQz Ez(s]u%%aIENDB`"?) at /build/reproducible-path/gbrowse-2.56+dfsg/t/../lib/Bio/Graphics/Browser2/CachedTrack.pm line 154, <> line 45. -Can't locate object method "png" via package "PNG - - IHDRzEPLTE޳( pHYs+IIDATxZ[v # d8MՀ8h1Nf -1 g;PP.wבg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWgxр"93d1rYq| _ _7.gMqaL@?[n ߵ>-0O.0,əp"LɡЯOkڡ-ӌRkzŰԀHލn> MQ3X!ZG$*U72_ۣǓLOx?zCru{xRo7s-r2zKՂr<8txĩOܹ{G]X5z_l9bZ$UOSxN#UގS*GTU8UWMiN8uYKF+TWg-Upu-.pK~sÛgd<8룑g-Kmw uQf7% &i`=^֪=XeK_OzcSv_WꅪaܩzL?PoWu% kk^ۿ޾b]MX ojx^ g}>g8Pܙ>7~_mVq((>;w-IwmV/]kꕬU=UO;!YzwC˃VT=U gOi]rQZ9ʡ\TVr((UCAX/CIӮ9IENDB`" (perhaps you forgot to load "PNG - - IHDRzEPLTE޳( pHYs+IIDATxZ[v # d8MՀ8h1Nf -1 g;PP.wבg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWg-UZR5^ jT8kIըz%p֒QJ%UYKF+TWgxр"93d1rYq| _ _7.gMqaL@?[n ߵ>-0O.0,əp"LɡЯOkڡ-ӌRkzŰԀHލn> MQ3X!ZG$*U72_ۣǓLOx?zCru{xRo7s-r2zKՂr<8txĩOܹ{G]X5z_l9bZ$UOSxN#UގS*GTU8UWMiN8uYKF+TWg-Upu-.pK~sÛgd<8룑g-Kmw uQf7% &i`=^֪=XeK_OzcSv_WꅪaܩzL?PoWu% kk^ۿ޾b]MX ojx^ g}>g8Pܙ>7~_mVq((>;w-IwmV/]kꕬU=UO;!YzwC˃VT=U gOi]rQZ9ʡ\TVr((UCAX/CIӮ9IENDB`"?) at /build/reproducible-path/gbrowse-2.56+dfsg/t/../lib/Bio/Graphics/Browser2/CachedTrack.pm line 154, <> line 45. t/04.remoteserver.t ....... 1..43 ok 1 @@ -1965,8 +2002,8 @@ t/08.calign.t ............. 1..6 # Running under perl version 5.036000 for linux -# Current time local: Tue Jan 9 00:41:36 2024 -# Current time GMT: Tue Jan 9 00:41:36 2024 +# Current time local: Mon Feb 10 07:07:02 2025 +# Current time GMT: Mon Feb 10 07:07:02 2025 # Using Test.pm version 1.31 ok 1 ok 2 @@ -1976,7 +2013,7 @@ ok 6 ok All tests successful. -Files=10, Tests=448, 75 wallclock secs ( 0.12 usr 0.03 sys + 21.93 cusr 6.78 csys = 28.86 CPU) +Files=10, Tests=448, 29 wallclock secs ( 0.10 usr 0.03 sys + 19.89 cusr 5.43 csys = 25.45 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/gbrowse-2.56+dfsg' create-stamp debian/debhelper-build-stamp @@ -2906,9 +2943,9 @@ dh_gencontrol dh_md5sums dh_builddeb +dpkg-deb: building package 'gbrowse-data' in '../gbrowse-data_2.56+dfsg-11_all.deb'. dpkg-deb: building package 'gbrowse' in '../gbrowse_2.56+dfsg-11_all.deb'. dpkg-deb: building package 'gbrowse-calign' in '../gbrowse-calign_2.56+dfsg-11_amd64.deb'. -dpkg-deb: building package 'gbrowse-data' in '../gbrowse-data_2.56+dfsg-11_all.deb'. dpkg-deb: building package 'gbrowse-calign-dbgsym' in '../gbrowse-calign-dbgsym_2.56+dfsg-11_amd64.deb'. dpkg-genbuildinfo --build=binary -O../gbrowse_2.56+dfsg-11_amd64.buildinfo dpkg-genchanges --build=binary -O../gbrowse_2.56+dfsg-11_amd64.changes @@ -2917,12 +2954,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3023258/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2273998 and its subdirectories -I: Current time: Mon Jan 8 12:42:33 -12 2024 -I: pbuilder-time-stamp: 1704760953 +I: removing directory /srv/workspace/pbuilder/3023258 and its subdirectories +I: Current time: Mon Feb 10 21:07:18 +14 2025 +I: pbuilder-time-stamp: 1739171238