Diff of the two buildlogs: -- --- b1/build.log 2023-04-10 04:59:46.986700566 +0000 +++ b2/build.log 2023-04-10 05:15:03.048062345 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Apr 9 16:40:58 -12 2023 -I: pbuilder-time-stamp: 1681101658 +I: Current time: Mon May 13 01:22:51 +14 2024 +I: pbuilder-time-stamp: 1715512971 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./plast_2.3.2+dfsg.orig.tar.xz] I: copying [./plast_2.3.2+dfsg-10.debian.tar.xz] I: Extracting source -gpgv: Signature made Mon Dec 5 06:36:04 2022 -12 +gpgv: Signature made Tue Dec 6 08:36:04 2022 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -32,11 +32,20 @@ dpkg-source: info: applying pcre.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/22333/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/D01_modify_environment starting +debug: Running on codethink11-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +lrwxrwxrwx 1 root root 4 Jan 6 2023 /bin/sh -> dash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME='pbuilder2' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' @@ -46,38 +55,38 @@ IFS=' ' LANG='C' - LANGUAGE='en_US:en' + LANGUAGE='nl_BE:nl' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' + PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' - PPID='22333' + PPID='9476' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZKN4r5A3/pbuilderrc_q2Xq --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZKN4r5A3/b1 --logfile b1/build.log plast_2.3.2+dfsg-10.dsc' + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZKN4r5A3/pbuilderrc_MEmP --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZKN4r5A3/b2 --logfile b2/build.log --extrapackages usrmerge plast_2.3.2+dfsg-10.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' + TZ='/usr/share/zoneinfo/Etc/GMT-14' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a - Linux codethink12-arm64 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 8 22:26 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/22333/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 10 06:48 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -277,7 +286,7 @@ Get: 154 http://deb.debian.org/debian bookworm/main arm64 libpcre2-posix3 arm64 10.42-1 [55.5 kB] Get: 155 http://deb.debian.org/debian bookworm/main arm64 libpcre2-dev arm64 10.42-1 [664 kB] Get: 156 http://deb.debian.org/debian bookworm/main arm64 libsimde-dev all 0.7.4~rc2-2 [377 kB] -Fetched 358 MB in 29s (12.4 MB/s) +Fetched 358 MB in 51s (6990 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) @@ -1099,8 +1108,17 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/plast-2.3.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../plast_2.3.2+dfsg-10_source.changes +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/plast-2.3.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../plast_2.3.2+dfsg-10_source.changes dpkg-buildpackage: info: source package plast dpkg-buildpackage: info: source version 2.3.2+dfsg-10 dpkg-buildpackage: info: source distribution unstable @@ -1169,177 +1187,213 @@ make -f CMakeFiles/PlastLibrary.dir/build.make CMakeFiles/PlastLibrary.dir/depend make -f CMakeFiles/plast.dir/build.make CMakeFiles/plast.dir/depend make[4]: Entering directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' -cd /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plast-2.3.2+dfsg /build/plast-2.3.2+dfsg /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/CMakeFiles/PlastLibrary.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' cd /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plast-2.3.2+dfsg /build/plast-2.3.2+dfsg /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/CMakeFiles/plast.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' +cd /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plast-2.3.2+dfsg /build/plast-2.3.2+dfsg /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu /build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/CMakeFiles/PlastLibrary.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/plast.dir/build.make CMakeFiles/plast.dir/build make[4]: Entering directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' -[ 0%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o make[4]: Leaving directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/PlastLibrary.dir/build.make CMakeFiles/PlastLibrary.dir/build -/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/AlgoIndexatorNucleotide.cpp +make[4]: Entering directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' +[ 0%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o [ 0%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.cpp +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/AlgoIndexatorNucleotide.cpp [ 1%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/AlgorithmPlastn.cpp.o +/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.cpp /usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/AlgorithmPlastn.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/AlgorithmPlastn.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/AlgorithmPlastn.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/AlgorithmPlastn.cpp -make[4]: Entering directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' -[ 1%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o -/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/BasicAlgoIndexator.cpp -[ 1%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o [ 1%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/DatabasesProvider.cpp +[ 1%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AbstractAlgorithm.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.cpp +/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/BasicAlgoIndexator.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/BasicAlgoIndexator.cpp +[ 1%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/AlgoIndexatorNucleotide.cpp.o [ 2%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/DefaultAlgoConfig.cpp.o /usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/DefaultAlgoConfig.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/DefaultAlgoConfig.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/DefaultAlgoConfig.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoConfig.cpp -[ 2%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o +[ 2%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o +/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o -MF CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o.d -o CMakeFiles/plast.dir/src/algo/core/impl/DatabasesProvider.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/DatabasesProvider.cpp +/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security 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CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp -[ 24%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o +[ 29%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o /usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -c 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CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp +[ 32%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o /usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/BufferedSequenceDatabase.cpp -[ 25%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o -/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp -[ 25%] Building CXX 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-O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/DefaultAlphabet.cpp -[ 26%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o +[ 33%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o /usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp -[ 27%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o +[ 34%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o /usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/FastaSequenceIterator.cpp -[ 27%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o -/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/FastaSequenceOutput.cpp -[ 27%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceDatabase.cpp /build/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp: In member function 'virtual int database::impl::FastaDatabaseQuickReader::load(const std::string&)': /build/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:200:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 200 | fread (&magic, sizeof(u_int64_t), 1, file); @@ -1375,107 +1429,151 @@ /build/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:373:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 373 | u_int64_t magic = 0; fread (&magic, sizeof(u_int64_t), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 28%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o +[ 34%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o +/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include 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CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o -c /build/plast-2.3.2+dfsg/src/algo/hits/gap/CompositionHitIterator.cpp +[ 56%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o -c /build/plast-2.3.2+dfsg/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp +[ 57%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o -c /build/plast-2.3.2+dfsg/src/alignment/visitors/impl/ModelBuilderVisitor.cpp 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/build/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp /build/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp: In destructor 'os::impl::LinuxFile::~LinuxFile()': /build/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp:42:20: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 42 | system (ss.str().c_str()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ -[ 45%] Building CXX object CMakeFiles/plast.dir/src/os/impl/LinuxMemory.cpp.o -/usr/bin/c++ -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/LinuxMemory.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/LinuxMemory.cpp.o.d -o 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CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp +make[4]: Leaving directory '/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu' +[ 73%] Built target plast [ 74%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/DefaultAlphabet.cpp [ 74%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o @@ -1712,6 +1730,8 @@ /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/FastaSequenceOutput.cpp [ 75%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceDatabase.cpp +[ 76%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceIterator.cpp /build/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp: In member function 'virtual int database::impl::FastaDatabaseQuickReader::load(const std::string&)': /build/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:200:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 200 | fread (&magic, sizeof(u_int64_t), 1, file); @@ -1747,9 +1767,7 @@ /build/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:373:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 373 | u_int64_t magic = 0; fread (&magic, sizeof(u_int64_t), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 76%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o [ 76%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceIterator.cpp /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/ReverseStrandSequenceIterator.cpp [ 76%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o -c /build/plast-2.3.2+dfsg/src/database/impl/Sequence.cpp @@ -1766,9 +1784,9 @@ [ 78%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o -c /build/plast-2.3.2+dfsg/src/designpattern/impl/FileLineIterator.cpp [ 79%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o -[ 79%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o -/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o -c /build/plast-2.3.2+dfsg/src/designpattern/impl/Observer.cpp +[ 78%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Property.cpp.o -c /build/plast-2.3.2+dfsg/src/designpattern/impl/Property.cpp +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/Observer.cpp.o -c /build/plast-2.3.2+dfsg/src/designpattern/impl/Observer.cpp [ 80%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o -c /build/plast-2.3.2+dfsg/src/designpattern/impl/SystemCommand.cpp [ 80%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/TokenizerIterator.cpp.o @@ -1779,12 +1797,12 @@ /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o -c /build/plast-2.3.2+dfsg/src/designpattern/impl/XmlReader.cpp [ 81%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/AbstractDatabaseIndex.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/AbstractDatabaseIndex.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/AbstractDatabaseIndex.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/AbstractDatabaseIndex.cpp.o -c /build/plast-2.3.2+dfsg/src/index/impl/AbstractDatabaseIndex.cpp -[ 81%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o -/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o -c /build/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp /build/plast-2.3.2+dfsg/src/designpattern/impl/SystemCommand.cpp: In destructor 'dp::impl::SystemCommand::~SystemCommand()': /build/plast-2.3.2+dfsg/src/designpattern/impl/SystemCommand.cpp:119:16: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 119 | system (tmp); | ~~~~~~~^~~~~ +[ 81%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o -c /build/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp [ 82%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o -c /build/plast-2.3.2+dfsg/src/index/impl/DatabaseIndexHash.cpp [ 82%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o @@ -1889,12 +1907,12 @@ | ~~~~~~~~~~~~~~~~ | | | u_int64_t {aka long unsigned int} +[ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp /build/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp: In destructor 'os::impl::LinuxFile::~LinuxFile()': /build/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp:42:20: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 42 | system (ss.str().c_str()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ -[ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp [ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/LinuxMemoryFile.cpp [ 92%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o @@ -1912,25 +1930,25 @@ [ 94%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/MacOsTime.cpp [ 94%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o -[ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/WindowsFile.cpp +[ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/WindowsMemory.cpp -[ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o -/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/WindowsThread.cpp [ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemoryFile.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g 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CMakeFiles/PlastLibrary.dir/src/os/impl/ZlibFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/ZlibFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/ZlibFile.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/ZlibFile.cpp +[ 95%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/WindowsThread.cpp [ 96%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o -c /build/plast-2.3.2+dfsg/src/os/impl/WindowsTime.cpp +[ 96%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/ZlibFile.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 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CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedIterator.cpp.o -c /build/plast-2.3.2+dfsg/src/seed/impl/AbstractSeedIterator.cpp -[ 97%] Building CXX object CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o -/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o -c /build/plast-2.3.2+dfsg/src/seed/impl/AbstractSeedModel.cpp /build/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp: In member function 'virtual u_int32_t os::impl::LinuxMemoryAllocator::getMemUsage()': /build/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp:46:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 46 | fgets (buffer, sizeof(buffer), file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 97%] Building CXX object CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o +/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o -c /build/plast-2.3.2+dfsg/src/seed/impl/AbstractSeedModel.cpp [ 97%] Building CXX object CMakeFiles/PlastLibrary.dir/src/seed/impl/BasicSeedModel.cpp.o /usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/build/plast-2.3.2+dfsg/obj-aarch64-linux-gnu/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/build/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/seed/impl/BasicSeedModel.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/seed/impl/BasicSeedModel.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/seed/impl/BasicSeedModel.cpp.o -c /build/plast-2.3.2+dfsg/src/seed/impl/BasicSeedModel.cpp [ 97%] Building CXX object CMakeFiles/PlastLibrary.dir/src/seed/impl/SubSeedModel.cpp.o @@ -2291,12 +2309,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/9476/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/22333 and its subdirectories -I: Current time: Sun Apr 9 16:59:45 -12 2023 -I: pbuilder-time-stamp: 1681102785 +I: removing directory /srv/workspace/pbuilder/9476 and its subdirectories +I: Current time: Mon May 13 01:38:01 +14 2024 +I: pbuilder-time-stamp: 1715513881