Diff of the two buildlogs: -- --- b1/build.log 2023-05-06 12:19:14.734472860 +0000 +++ b2/build.log 2023-05-06 12:53:56.627213864 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Jun 7 06:01:30 -12 2024 -I: pbuilder-time-stamp: 1717783290 +I: Current time: Sun May 7 02:19:19 +14 2023 +I: pbuilder-time-stamp: 1683375559 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./python-biopython_1.80+dfsg.orig.tar.xz] I: copying [./python-biopython_1.80+dfsg-4.debian.tar.xz] I: Extracting source -gpgv: Signature made Thu Dec 29 02:19:32 2022 -12 +gpgv: Signature made Fri Dec 30 04:19:32 2022 +14 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-biopython_1.80+dfsg-4.dsc: no acceptable signature found @@ -35,52 +35,84 @@ dpkg-source: info: applying numpy-1.24.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2414/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/D01_modify_environment starting +debug: Running on codethink10-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 7 02:19 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' - DISTRIBUTION='bookworm' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2414' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=21870 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ag2m1r5h/pbuilderrc_KRu8 --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ag2m1r5h/b1 --logfile b1/build.log python-biopython_1.80+dfsg-4.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ag2m1r5h/pbuilderrc_pI46 --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ag2m1r5h/b2 --logfile b2/build.log --extrapackages usrmerge python-biopython_1.80+dfsg-4.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink11-arm64 4.15.0-210-generic #221-Ubuntu SMP Tue Apr 18 08:32:48 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-210-generic #221-Ubuntu SMP Tue Apr 18 08:32:48 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Jun 5 04:48 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2414/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 6 00:25 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -468,7 +500,7 @@ Get: 278 http://deb.debian.org/debian bookworm/main arm64 texlive-latex-extra all 2022.20230122-3 [19.2 MB] Get: 279 http://deb.debian.org/debian bookworm/main arm64 wise-data all 2.4.1-23 [78.2 kB] Get: 280 http://deb.debian.org/debian bookworm/main arm64 wise arm64 2.4.1-23 [969 kB] -Fetched 328 MB in 17s (19.1 MB/s) +Fetched 328 MB in 6s (57.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) @@ -1656,8 +1688,17 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/python-biopython-1.80+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-biopython_1.80+dfsg-4_source.changes +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/python-biopython-1.80+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-biopython_1.80+dfsg-4_source.changes dpkg-buildpackage: info: source package python-biopython dpkg-buildpackage: info: source version 1.80+dfsg-4 dpkg-buildpackage: info: source distribution unstable @@ -23603,12 +23644,12 @@ BioSQL.DBUtils docstring test ... ok BioSQL.Loader docstring test ... ok ---------------------------------------------------------------------- -Ran 553 tests in 1352.793 seconds +Ran 553 tests in 1179.365 seconds Skipping any tests requiring internet access Python version: 3.11.2 (main, Mar 13 2023, 12:18:29) [GCC 12.2.0] Operating system: posix linux - rm -fr -- /tmp/dh-xdg-rundir-uBNB_l_n + rm -fr -- /tmp/dh-xdg-rundir-DF3qllQ7 mv Tests_avoid/* Tests rmdir Tests_avoid make[1]: Leaving directory '/build/python-biopython-1.80+dfsg' @@ -23734,8 +23775,8 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/tree1.nwk -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/out.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/tmpdirprankmsatC3bGN -creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/tmpdirprankmsaJ9hmYD +creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/tmpdirprankmsaTvuJJH +creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/tmpdirprankmsaXej27C copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/output.best.nex -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/output.best.fas -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/__pycache__ @@ -23970,6 +24011,11 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_phyml_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_phenotype_fit.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_phenotype.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise_alignment_map.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise_aligner.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise2_no_C.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise2.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_motifs_online.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_motifs.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_kNN.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_geo.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -23985,10 +24031,9 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Tutorial.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_TreeConstruction.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_TogoWS.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_TCoffee_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SwissProt.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SffIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise_alignment_map.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise_aligner.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Seq_objs.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqUtils.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqRecord.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -23996,7 +24041,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_online.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_index.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_features.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise2_no_C.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_Xdna.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_TwoBitIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_SnapGene.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24007,13 +24051,12 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_Insdc.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_Gck.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_FastaIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_TCoffee_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_pairwise2.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO_AbiIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SeqFeature.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_write.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_model.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_legacy.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_interproscan_xml.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_hmmer3_text_index.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_hmmer3_text.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24025,7 +24068,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_hmmer2_text.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_hhsuite2_text.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_fasta_m10_index.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_motifs_online.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_fasta_m10.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_exonerate_text_index.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24058,7 +24100,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Phylo_NeXML.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Phylo_CDAO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_PhyloXML.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_SearchIO_legacy.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Phylo.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Phd.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Pathway.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24092,6 +24133,11 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_PAML_codeml.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_PAML_baseml.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Nexus.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NaiveBayes.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NMR.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NCBI_qblast.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NCBI_BLAST_tools.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NCBIXML.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NCBITextParser.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Medline.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_MarkovModel.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24111,7 +24157,11 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_GraphicsChromosome.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_GraphicsBitmaps.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_GenomeDiagram.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NaiveBayes.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_GenBank.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_File.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Fasttree_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_ExPASy.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Enzyme.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Entrez_parser.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Entrez_online.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Entrez.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24123,7 +24173,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Compass.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_ColorSpiral.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_CodonTable.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NMR.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Clustalw_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_ClustalOmega_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Chi2.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24137,9 +24186,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_BioSQL_MySQLdb_online.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_BWA_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Application.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NCBI_qblast.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NCBI_BLAST_tools.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_GenBank.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_tabular.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_stockholm.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_sam.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24148,12 +24194,16 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_nexus.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_msf.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_mauve.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_File.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_maf.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_NCBIXML.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_hhr.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_fasta.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_exonerate.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_emboss.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_clustal.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bigpsl.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bigmaf.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bigbed.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bed.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_a2m.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_Alignment.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_AlignInfo.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24162,7 +24212,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_AlignIO_MauveIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_AlignIO_FastaIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_AlignIO_EmbossIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bed.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_AlignIO_ClustalIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_AlignIO.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Affy.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests @@ -24171,7 +24220,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/search_tests_common.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/run_tests.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/requires_internet.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Fasttree_tool.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/phenotype copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/phenotype/SmallPlates.csv -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/phenotype copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/phenotype/SmallPlate_2.json -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/phenotype @@ -24184,9 +24232,6 @@ creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/msf copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/msf/W_prot.msf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/msf copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/msf/DOA_prot.msf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/msf -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_emboss.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_clustal.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bigpsl.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/motifs copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/motifs/transfac.dat -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/motifs copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/motifs/minimal_test.meme -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/motifs @@ -24248,7 +24293,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/UniGene/Mdm_partial.data -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/UniGene copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/UniGene/Hs.2.data -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/UniGene copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/UniGene/Eca.1.2425.data -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/UniGene -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bigmaf.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/TwoBit copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/TwoBit/sequence.long.2bit -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/TwoBit copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/TwoBit/sequence.littleendian.2bit -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/TwoBit @@ -24347,9 +24391,13 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SeqXML/dna_example.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SeqXML copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SeqXML/corrupt_example2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SeqXML copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SeqXML/corrupt_example1.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SeqXML -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Align_bigbed.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/sam2.sam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/sam1.sam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/readme.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1_refresh.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1_header.sam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1_header.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1.sam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1.fa -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam @@ -24357,11 +24405,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/bam2.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/bam1_sorted.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/bam1.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/sam1.sam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/readme.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1_refresh.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1_header.sam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/SamBam/ex1_header.bam -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SamBam creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Saf copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Saf/saf1.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Saf creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/SCOP @@ -24423,7 +24466,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Registry/seqs.fasta -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Registry copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Registry/bt001 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Registry copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Registry/EDD_RAT.dat -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Registry -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_ExPASy.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Rebase copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Rebase/taqi.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Rebase copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Rebase/taqi.htm -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Rebase @@ -24563,7 +24605,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Phd/phd1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Phd creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PQR copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PQR/1A80.pqr -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PQR -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/test_Enzyme.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/occupancy.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/lib_10_z_5.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB @@ -24571,45 +24612,45 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/header.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/dssp_xtra_Sander.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/disordered.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/6WQA.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/d256ba_.ent -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/alignment_file.fa -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/a_structure.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/a_structure.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Wilke_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Sander_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Miller_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Ahmad_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/7DDO.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/7CFN_aligned.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/7CFN.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/6WQA.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/4ZHL.mmtf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/4ZHL.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/4Q9R_min.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/4CUP.mmtf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/alignment_file.fa -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/a_structure.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/a_structure.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/4CUP.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/3JQH.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2n0n_M1.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Wilke_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Sander_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Miller_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2XHE.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2XHE.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2OFG.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/Ahmad_RASA.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2BEG_noheader.dssp -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2BEG.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2BEG.dssp -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/7DDO.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2XHE.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2BEG.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1SSU_mod.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1SSU_mod.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1MOM_min.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1LCD.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1LCD.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/2XHE.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1AS5.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1A8O.xyzr -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1A8O.rsa -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1A8O.pdb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1A8O.mmtf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/7CFN_aligned.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1A8O.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1A8O.asa -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/1A7G.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PDB/7CFN.cif -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PDB creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/gen_results.py -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Trees @@ -24648,6 +24689,11 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34 +creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02 @@ -24677,14 +24723,22 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/clademodelC copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/clademodelC +creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/all_NSsites creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/aa_pairwise copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/aa_pairwise @@ -24715,19 +24769,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/NSsite3 copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/NSsite3 -creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/branchsiteA -creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1 creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/baseml creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/baseml/versions copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/Results/baseml/versions @@ -24978,6 +25019,9 @@ creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/wrong_version.idx -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/unfinished.idx -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_test.maf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_test.bb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF @@ -24992,9 +25036,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/bundle_without_target.maf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/bundle_without_target.bb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/bug2453.maf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_test.maf -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_test.bb -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/MAF creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/map03070.png -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/map01100.png -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG @@ -25004,12 +25045,12 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/ko00253.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/ko00010.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/gene.sample -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/enzyme.4letter -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/compound.sample -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/compound.irregular -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/enzyme.sample -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/enzyme.new -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/enzyme.irregular -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/enzyme.4letter -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/compound.sample -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/KEGG/compound.irregular -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/KEGG creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/InterProScan copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/InterProScan/test_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/InterProScan creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/IntelliGenetics @@ -25223,10 +25264,16 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output015.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output014.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output013.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output012.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output011.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output010.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output009.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output008.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output007.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output006.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output005.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output004.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output003.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output002.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output001.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/nucleotide_m8CC.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta @@ -25242,16 +25289,10 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/f001 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/elderberry.nu -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/dups.fasta -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output003.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/centaurea.nu -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/aster_no_wrap.pro -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/aster.pro -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/README -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output007.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output006.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output012.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output011.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Fasta/output010.m10 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Fasta creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/FSSP copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/FSSP/1cnv.fssp -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/FSSP creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/ExtendedPhylip @@ -25521,6 +25562,10 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_tblastx_001_v2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_tblastx_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_tblastn_001_v2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_tblastn_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastx_001_v2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastx_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastp_001_v2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastp_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastn_001_v2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastn_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast @@ -25551,12 +25596,9 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2222_blastx_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2222_blastp_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2218_blastp_002.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_tblastn_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastx_001_v2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2218_blastp_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2218L_blastp_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastx_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2212L_blastx_001.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast @@ -25664,7 +25706,6 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/mirna.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/mirna.tab -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/README.txt -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Blast/xml_2900_blastp_001_v2.xml -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Blast creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/BioSQL copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/BioSQL/cor6_6.db -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/BioSQL copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/BioSQL/biosqldb-sqlite.sql -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/BioSQL @@ -25687,25 +25728,24 @@ creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Affy copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Affy/affy_v4_example.CEL -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Affy copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Affy/affy_v3_example.CEL -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Affy +creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Ace/seq.cap.ace -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Ace/contig1.ace -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Ace/consed_sample.ace -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/test.fsa -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/test_data -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/test.fsa -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/nonascii_encoding.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/no_smpl1.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/fake.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/310.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/empty.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/A6_1-DB3.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/3730.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/3100.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Abi/310.ab1 -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Abi copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/.coveragerc -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests -creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Ace/seq.cap.ace -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Ace/contig1.ace -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Tests/Ace/consed_sample.ace -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/Ace creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc creating /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_align.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_appendix.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_contributing.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_testing.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial @@ -25723,11 +25763,12 @@ copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_entrez.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_searchio.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_blast.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_align.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_seqio.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_seq_annot.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_seq_objects.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial -copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_introduction.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_quick_start.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial +copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_introduction.aux -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_align.tex -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_uniprot.tex -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial copying /build/python-biopython-1.80+dfsg/.pybuild/cpython3_3.11/build/Doc/Tutorial/chapter_testing.tex -> /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/Tutorial @@ -26940,6 +26981,11 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_phyml_tool.py to test_phyml_tool.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_phenotype.py to test_phenotype.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise_alignment_map.py to test_pairwise_alignment_map.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise2_no_C.py to test_pairwise2_no_C.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise2.py to test_pairwise2.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_motifs_online.py to test_motifs_online.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_motifs.py to test_motifs.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_kNN.py to test_kNN.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_geo.py to test_geo.cpython-311.pyc @@ -26955,10 +27001,9 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Tutorial.py to test_Tutorial.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_TogoWS.py to test_TogoWS.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SwissProt.py to test_SwissProt.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SffIO.py to test_SffIO.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise_alignment_map.py to test_pairwise_alignment_map.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqUtils.py to test_SeqUtils.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.cpython-311.pyc @@ -26966,7 +27011,6 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise2_no_C.py to test_pairwise2_no_C.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_Xdna.py to test_SeqIO_Xdna.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_TwoBitIO.py to test_SeqIO_TwoBitIO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_SnapGene.py to test_SeqIO_SnapGene.cpython-311.pyc @@ -26977,13 +27021,12 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_Gck.py to test_SeqIO_Gck.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_pairwise2.py to test_pairwise2.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO_AbiIO.py to test_SeqIO_AbiIO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqIO.py to test_SeqIO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_legacy.py to test_SearchIO_legacy.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.cpython-311.pyc @@ -26995,7 +27038,6 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_hhsuite2_text.py to test_SearchIO_hhsuite2_text.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_motifs_online.py to test_motifs_online.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_exonerate_text_index.py to test_SearchIO_exonerate_text_index.cpython-311.pyc @@ -27028,7 +27070,6 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_SearchIO_legacy.py to test_SearchIO_legacy.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Phylo.py to test_Phylo.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Phd.py to test_Phd.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Pathway.py to test_Pathway.cpython-311.pyc @@ -27062,6 +27103,11 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Nexus.py to test_Nexus.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NMR.py to test_NMR.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NCBITextParser.py to test_NCBITextParser.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Medline.py to test_Medline.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.cpython-311.pyc @@ -27081,7 +27127,11 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_GraphicsChromosome.py to test_GraphicsChromosome.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_GraphicsBitmaps.py to test_GraphicsBitmaps.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_GenBank.py to test_GenBank.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_File.py to test_File.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_ExPASy.py to test_ExPASy.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Enzyme.py to test_Enzyme.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Entrez.py to test_Entrez.cpython-311.pyc @@ -27093,7 +27143,6 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Compass.py to test_Compass.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_CodonTable.py to test_CodonTable.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NMR.py to test_NMR.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Chi2.py to test_Chi2.cpython-311.pyc @@ -27107,9 +27156,6 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_BWA_tool.py to test_BWA_tool.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Application.py to test_Application.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_GenBank.py to test_GenBank.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_tabular.py to test_Align_tabular.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_stockholm.py to test_Align_stockholm.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_sam.py to test_Align_sam.cpython-311.pyc @@ -27118,12 +27164,16 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_nexus.py to test_Align_nexus.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_msf.py to test_Align_msf.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_mauve.py to test_Align_mauve.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_File.py to test_File.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_maf.py to test_Align_maf.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_hhr.py to test_Align_hhr.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_fasta.py to test_Align_fasta.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_exonerate.py to test_Align_exonerate.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_emboss.py to test_Align_emboss.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_clustal.py to test_Align_clustal.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bigpsl.py to test_Align_bigpsl.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bigmaf.py to test_Align_bigmaf.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bigbed.py to test_Align_bigbed.cpython-311.pyc +byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bed.py to test_Align_bed.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_a2m.py to test_Align_a2m.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_Alignment.py to test_Align_Alignment.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.cpython-311.pyc @@ -27132,7 +27182,6 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_AlignIO_MauveIO.py to test_AlignIO_MauveIO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bed.py to test_Align_bed.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_AlignIO.py to test_AlignIO.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Affy.py to test_Affy.cpython-311.pyc @@ -27141,17 +27190,9 @@ byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/search_tests_common.py to search_tests_common.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/run_tests.py to run_tests.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/requires_internet.py to requires_internet.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/pairwise2_testCases.py to pairwise2_testCases.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_emboss.py to test_Align_emboss.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_clustal.py to test_Align_clustal.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bigpsl.py to test_Align_bigpsl.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/common_BioSQL.py to common_BioSQL.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bigmaf.py to test_Align_bigmaf.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Align_bigbed.py to test_Align_bigbed.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_ExPASy.py to test_ExPASy.cpython-311.pyc -byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/test_Enzyme.py to test_Enzyme.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Tests/PAML/gen_results.py to gen_results.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/examples/www_blast.py to www_blast.cpython-311.pyc byte-compiling /build/python-biopython-1.80+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/Doc/examples/swissprot.py to swissprot.cpython-311.pyc @@ -27568,12 +27609,12 @@ install -p -m0644 debian/README.Debian debian/python3-biopython/usr/share/doc/python3-biopython/README.Debian install -p -m0644 debian/copyright debian/python3-biopython/usr/share/doc/python3-biopython/copyright dh_installchangelogs -O--buildsystem=pybuild - install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc - install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.dch.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/changelog.Debian - install -p -m0644 debian/NEWS debian/python-biopython-doc/usr/share/doc/python-biopython-doc/NEWS.Debian install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython install -p -m0644 debian/.debhelper/generated/python3-biopython/dh_installchangelogs.dch.trimmed debian/python3-biopython/usr/share/doc/python3-biopython/changelog.Debian install -p -m0644 debian/NEWS debian/python3-biopython/usr/share/doc/python3-biopython/NEWS.Debian + install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc + install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.dch.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/changelog.Debian + install -p -m0644 debian/NEWS debian/python-biopython-doc/usr/share/doc/python-biopython-doc/NEWS.Debian install -m0755 -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql install -p -m0644 debian/.debhelper/generated/python3-biopython-sql/dh_installchangelogs.dch.trimmed debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/changelog.Debian install -p -m0644 debian/NEWS debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/NEWS.Debian @@ -27591,7 +27632,7 @@ D: dh_python3 pydist:173: trying to find dependency for numpy (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps -D: dh_python3 depends:281: D={'python3 (>= 3.11~)', 'python3-numpy', 'python3 (<< 3.12)', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] +D: dh_python3 depends:281: D={'python3:any', 'python3 (>= 3.11~)', 'python3 (<< 3.12)', 'python3-numpy'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:204: processing package python3-biopython-sql... D: dh_python3 fs:52: moving files from debian/python3-biopython-sql/usr/lib/python3.11/dist-packages to debian/python3-biopython-sql/usr/lib/python3/dist-packages/ D: dh_python3 fs:400: package python3-biopython-sql details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} @@ -27610,40 +27651,40 @@ ln -s ../../../../../../share/xml/w3c-sgml-lib/schema/dtd/XX-MathML2-20031104/mathml2.dtd debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd dh_strip_nondeterminism -O--buildsystem=pybuild Using 1672320127 as canonical time - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_cl2a.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_cl.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/tRNA_chrom.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/smcra.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/simple_chrom.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map03070.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map01100.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/Fasta/flowers.pro.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_simple.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear_nice.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular_nice.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-simple-draw.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_cl2a.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/three_track_cl.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/tRNA_chrom.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/smcra.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/simple_chrom.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf-zoom.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/hist_plot.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/gc_plot.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/dot_plot_scatter.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-rooted.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-draw-example.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-dot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-color.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-color-draw.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_shafts.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_heads.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/BlastRecord.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.gz using File::StripNondeterminism::handlers::gzip + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear_nice.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_linear.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular_nice.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/plasmid_circular.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-simple-draw.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/dot_plot.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_xs.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_white.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_s.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_m.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/phylo-apaf-zoom.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/hist_plot.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/gc_plot.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/dot_plot_scatter.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_shafts.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/GD_sigil_arrow_heads.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/BlastRecord.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/examples/ls_orchid.gbk.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/biopython_logo_l.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/SRR001666.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Doc/images/PSIBlastRecord.png using File::StripNondeterminism::handlers::png @@ -27653,11 +27694,11 @@ cd debian/python3-biopython cd debian/python-biopython-doc cd debian/python3-biopython-sql + chmod a-x usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian + gzip -9nf usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian chmod a-x usr/share/doc/python3-biopython-sql/NEWS.Debian usr/share/doc/python3-biopython-sql/changelog.Debian gzip -9nf usr/share/doc/python3-biopython-sql/NEWS.Debian usr/share/doc/python3-biopython-sql/changelog.Debian cd '/build/python-biopython-1.80+dfsg' - chmod a-x usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian - gzip -9nf usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian cd '/build/python-biopython-1.80+dfsg' chmod a-x usr/share/doc/python-biopython-doc/Doc/Tutorial.pdf usr/share/doc/python-biopython-doc/Doc/Tutorial.tex usr/share/doc/python-biopython-doc/Doc/Tutorial.txt usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_align.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_appendix.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_blast.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cluster.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_contributing.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_cookbook.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_entrez.tex usr/share/doc/python-biopython-doc/Doc/Tutorial/chapter_graphics.tex 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usr/share/doc/python-biopython-doc/Tests/SwissProt/O95832.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P04439.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P0A186.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P0CK95.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P16235.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P60137.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P60904.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P62258.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P68308.txt @@ -27671,17 +27712,17 @@ make[1]: Entering directory '/build/python-biopython-1.80+dfsg' dh_fixperms find debian/python3-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/python-biopython-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biopython-sql ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/python3-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python-biopython-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biopython-sql/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython-sql/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython-sql/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/python3-biopython/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython-sql -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biopython-sql/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/python3-biopython/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biopython-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biopython-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biopython-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 @@ -27770,10 +27811,6 @@ cat debian/python3-biopython-sql.prerm.debhelper >> debian/python3-biopython-sql/DEBIAN/prerm chmod 0755 -- debian/python3-biopython-sql/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild - install -m0755 -d debian/python-biopython-doc/DEBIAN - echo misc:Depends= >> debian/python-biopython-doc.substvars - echo misc:Pre-Depends= >> debian/python-biopython-doc.substvars - dpkg-gencontrol -ppython-biopython-doc -ldebian/changelog -Tdebian/python-biopython-doc.substvars -Pdebian/python-biopython-doc install -m0755 -d debian/python3-biopython/DEBIAN echo misc:Depends= >> debian/python3-biopython.substvars echo misc:Pre-Depends= >> debian/python3-biopython.substvars @@ -27783,19 +27820,23 @@ echo misc:Depends= >> debian/python3-biopython-sql.substvars echo misc:Pre-Depends= >> debian/python3-biopython-sql.substvars dpkg-gencontrol -ppython3-biopython-sql -ldebian/changelog -Tdebian/python3-biopython-sql.substvars -Pdebian/python3-biopython-sql -dpkg-gencontrol: warning: Provides field of package python3-biopython-sql: substitution variable ${python3:Provides} used, but is not defined - chmod 0644 -- debian/python3-biopython-sql/DEBIAN/control + install -m0755 -d debian/python-biopython-doc/DEBIAN + echo misc:Depends= >> debian/python-biopython-doc.substvars + echo misc:Pre-Depends= >> debian/python-biopython-doc.substvars + dpkg-gencontrol -ppython-biopython-doc -ldebian/changelog -Tdebian/python-biopython-doc.substvars -Pdebian/python-biopython-doc chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -Pdebian/python3-biopython +dpkg-gencontrol: warning: Provides field of package python3-biopython-sql: substitution variable ${python3:Provides} used, but is not defined + chmod 0644 -- debian/python3-biopython-sql/DEBIAN/control chmod 0644 -- debian/python-biopython-doc/DEBIAN/control chmod 0644 -- debian/python3-biopython/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-biopython-sql/DEBIAN - install -m0755 -d debian/python-biopython-doc/DEBIAN cd debian/python3-biopython-sql >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + install -m0755 -d debian/python-biopython-doc/DEBIAN + chmod 0644 -- debian/python3-biopython-sql/DEBIAN/md5sums install -m0755 -d debian/python3-biopython/DEBIAN cd debian/python3-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/python3-biopython-sql/DEBIAN/md5sums cd debian/python-biopython-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-biopython/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN @@ -27804,13 +27845,13 @@ chmod 0644 -- debian/python-biopython-doc/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-biopython .. - dpkg-deb --root-owner-group --build debian/.debhelper/python3-biopython/dbgsym-root .. - dpkg-deb --root-owner-group --build debian/python-biopython-doc .. dpkg-deb --root-owner-group --build debian/python3-biopython-sql .. -dpkg-deb: building package 'python-biopython-doc' in '../python-biopython-doc_1.80+dfsg-4_all.deb'. -dpkg-deb: building package 'python3-biopython-sql' in '../python3-biopython-sql_1.80+dfsg-4_all.deb'. + dpkg-deb --root-owner-group --build debian/python-biopython-doc .. + dpkg-deb --root-owner-group --build debian/.debhelper/python3-biopython/dbgsym-root .. dpkg-deb: building package 'python3-biopython' in '../python3-biopython_1.80+dfsg-4_arm64.deb'. dpkg-deb: building package 'python3-biopython-dbgsym' in '../python3-biopython-dbgsym_1.80+dfsg-4_arm64.deb'. +dpkg-deb: building package 'python-biopython-doc' in '../python-biopython-doc_1.80+dfsg-4_all.deb'. +dpkg-deb: building package 'python3-biopython-sql' in '../python3-biopython-sql_1.80+dfsg-4_all.deb'. dpkg-genbuildinfo --build=binary -O../python-biopython_1.80+dfsg-4_arm64.buildinfo dpkg-genchanges --build=binary -O../python-biopython_1.80+dfsg-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -27818,12 +27859,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/21870/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2414 and its subdirectories -I: Current time: Fri Jun 7 06:42:13 -12 2024 -I: pbuilder-time-stamp: 1717785733 +I: removing directory /srv/workspace/pbuilder/21870 and its subdirectories +I: Current time: Sun May 7 02:53:54 +14 2023 +I: pbuilder-time-stamp: 1683377634