Diff of the two buildlogs:

--
--- b1/build.log	2023-06-10 01:05:54.789232700 +0000
+++ b2/build.log	2023-06-10 01:11:05.591643124 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Fri Jun  9 12:56:27 -12 2023
-I: pbuilder-time-stamp: 1686358587
+I: Current time: Fri Jul 12 21:29:01 +14 2024
+I: pbuilder-time-stamp: 1720769341
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
 I: copying local configuration
@@ -17,7 +17,7 @@
 I: copying [./python-cobra_0.26.2.orig.tar.gz]
 I: copying [./python-cobra_0.26.2-1.debian.tar.xz]
 I: Extracting source
-gpgv: Signature made Sun Feb  5 09:32:48 2023 -12
+gpgv: Signature made Mon Feb  6 11:32:48 2023 +14
 gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
 gpgv:                issuer "emollier@debian.org"
 gpgv: Can't check signature: No public key
@@ -33,137 +33,169 @@
 dpkg-source: info: applying numpy_1.24.patch
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/1826/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/D01_modify_environment starting
+debug: Running on ionos6-i386.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Jul 12 21:29 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='i386'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 '
-  DISTRIBUTION='bookworm'
-  HOME='/root'
-  HOST_ARCH='i386'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu")
+  BASH_VERSION='5.2.15(1)-release'
+  BUILDDIR=/build
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=i386
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 '
+  DIRSTACK=()
+  DISTRIBUTION=bookworm
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=i686
+  HOST_ARCH=i386
   IFS=' 	
   '
-  INVOCATION_ID='5f312cea8eae4b6cb6d55d0b430b2f8e'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  LD_LIBRARY_PATH='/usr/lib/libeatmydata'
-  LD_PRELOAD='libeatmydata.so'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='1826'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=eb4d732d00c041d3b600af22c3e9f936
+  LANG=C
+  LANGUAGE=de_CH:de
+  LC_ALL=C
+  LD_LIBRARY_PATH=/usr/lib/libeatmydata
+  LD_PRELOAD=libeatmydata.so
+  MACHTYPE=i686-pc-linux-gnu
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnu
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=35971
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.AWmNTlpr/pbuilderrc_ucVR --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.AWmNTlpr/b1 --logfile b1/build.log python-cobra_0.26.2-1.dsc'
-  SUDO_GID='112'
-  SUDO_UID='107'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://78.137.99.97:3128'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.AWmNTlpr/pbuilderrc_3ugz --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.AWmNTlpr/b2 --logfile b2/build.log --extrapackages usrmerge python-cobra_0.26.2-1.dsc'
+  SUDO_GID=112
+  SUDO_UID=107
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://85.184.249.68:3128
 I: uname -a
-  Linux ionos12-i386 5.10.0-23-686-pae #1 SMP Debian 5.10.179-1 (2023-05-12) i686 GNU/Linux
+  Linux i-capture-the-hostname 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux
 I: ls -l /bin
   total 6036
-  -rwxr-xr-x 1 root root 1408088 Apr 23 09:24 bash
-  -rwxr-xr-x 3 root root   38404 Sep 18  2022 bunzip2
-  -rwxr-xr-x 3 root root   38404 Sep 18  2022 bzcat
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzcmp -> bzdiff
-  -rwxr-xr-x 1 root root    2225 Sep 18  2022 bzdiff
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzegrep -> bzgrep
-  -rwxr-xr-x 1 root root    4893 Nov 27  2021 bzexe
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzfgrep -> bzgrep
-  -rwxr-xr-x 1 root root    3775 Sep 18  2022 bzgrep
-  -rwxr-xr-x 3 root root   38404 Sep 18  2022 bzip2
-  -rwxr-xr-x 1 root root   17892 Sep 18  2022 bzip2recover
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzless -> bzmore
-  -rwxr-xr-x 1 root root    1297 Sep 18  2022 bzmore
-  -rwxr-xr-x 1 root root   42920 Sep 20  2022 cat
-  -rwxr-xr-x 1 root root   79816 Sep 20  2022 chgrp
-  -rwxr-xr-x 1 root root   67496 Sep 20  2022 chmod
-  -rwxr-xr-x 1 root root   79816 Sep 20  2022 chown
-  -rwxr-xr-x 1 root root  162024 Sep 20  2022 cp
-  -rwxr-xr-x 1 root root  136916 Jan  5 01:20 dash
-  -rwxr-xr-x 1 root root  137160 Sep 20  2022 date
-  -rwxr-xr-x 1 root root  100364 Sep 20  2022 dd
-  -rwxr-xr-x 1 root root  108940 Sep 20  2022 df
-  -rwxr-xr-x 1 root root  162152 Sep 20  2022 dir
-  -rwxr-xr-x 1 root root   87760 Mar 22 22:20 dmesg
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 dnsdomainname -> hostname
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 domainname -> hostname
-  -rwxr-xr-x 1 root root   38760 Sep 20  2022 echo
-  -rwxr-xr-x 1 root root      41 Jan 24 02:43 egrep
-  -rwxr-xr-x 1 root root   34664 Sep 20  2022 false
-  -rwxr-xr-x 1 root root      41 Jan 24 02:43 fgrep
-  -rwxr-xr-x 1 root root   84272 Mar 22 22:20 findmnt
-  -rwsr-xr-x 1 root root   30240 Mar 22 20:38 fusermount
-  -rwxr-xr-x 1 root root  218680 Jan 24 02:43 grep
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 gunzip
-  -rwxr-xr-x 1 root root    6447 Apr  9  2022 gzexe
-  -rwxr-xr-x 1 root root  100952 Apr  9  2022 gzip
-  -rwxr-xr-x 1 root root   21916 Dec 19 01:33 hostname
-  -rwxr-xr-x 1 root root   75756 Sep 20  2022 ln
-  -rwxr-xr-x 1 root root   55600 Mar 22 23:43 login
-  -rwxr-xr-x 1 root root  162152 Sep 20  2022 ls
-  -rwxr-xr-x 1 root root  214568 Mar 22 22:20 lsblk
-  -rwxr-xr-x 1 root root   96328 Sep 20  2022 mkdir
-  -rwxr-xr-x 1 root root   84008 Sep 20  2022 mknod
-  -rwxr-xr-x 1 root root   38792 Sep 20  2022 mktemp
-  -rwxr-xr-x 1 root root   63016 Mar 22 22:20 more
-  -rwsr-xr-x 1 root root   58912 Mar 22 22:20 mount
-  -rwxr-xr-x 1 root root   13856 Mar 22 22:20 mountpoint
-  -rwxr-xr-x 1 root root  157932 Sep 20  2022 mv
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 nisdomainname -> hostname
-  lrwxrwxrwx 1 root root      14 Apr  2 18:25 pidof -> /sbin/killall5
-  -rwxr-xr-x 1 root root   38792 Sep 20  2022 pwd
-  lrwxrwxrwx 1 root root       4 Apr 23 09:24 rbash -> bash
-  -rwxr-xr-x 1 root root   51080 Sep 20  2022 readlink
-  -rwxr-xr-x 1 root root   75720 Sep 20  2022 rm
-  -rwxr-xr-x 1 root root   51080 Sep 20  2022 rmdir
-  -rwxr-xr-x 1 root root   22308 Nov  2  2022 run-parts
-  -rwxr-xr-x 1 root root  133224 Jan  5 07:55 sed
-  lrwxrwxrwx 1 root root       4 Jan  5 01:20 sh -> dash
-  -rwxr-xr-x 1 root root   38760 Sep 20  2022 sleep
-  -rwxr-xr-x 1 root root   87976 Sep 20  2022 stty
-  -rwsr-xr-x 1 root root   83492 Mar 22 22:20 su
-  -rwxr-xr-x 1 root root   38792 Sep 20  2022 sync
-  -rwxr-xr-x 1 root root  598456 Apr  6 02:25 tar
-  -rwxr-xr-x 1 root root   13860 Nov  2  2022 tempfile
-  -rwxr-xr-x 1 root root  120776 Sep 20  2022 touch
-  -rwxr-xr-x 1 root root   34664 Sep 20  2022 true
-  -rwxr-xr-x 1 root root   17892 Mar 22 20:38 ulockmgr_server
-  -rwsr-xr-x 1 root root   30236 Mar 22 22:20 umount
-  -rwxr-xr-x 1 root root   38760 Sep 20  2022 uname
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 uncompress
-  -rwxr-xr-x 1 root root  162152 Sep 20  2022 vdir
-  -rwxr-xr-x 1 root root   71216 Mar 22 22:20 wdctl
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 ypdomainname -> hostname
-  -rwxr-xr-x 1 root root    1984 Apr  9  2022 zcat
-  -rwxr-xr-x 1 root root    1678 Apr  9  2022 zcmp
-  -rwxr-xr-x 1 root root    6460 Apr  9  2022 zdiff
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zegrep
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zfgrep
-  -rwxr-xr-x 1 root root    2081 Apr  9  2022 zforce
-  -rwxr-xr-x 1 root root    8103 Apr  9  2022 zgrep
-  -rwxr-xr-x 1 root root    2206 Apr  9  2022 zless
-  -rwxr-xr-x 1 root root    1842 Apr  9  2022 zmore
-  -rwxr-xr-x 1 root root    4577 Apr  9  2022 znew
-I: user script /srv/workspace/pbuilder/1826/tmp/hooks/D02_print_environment finished
+  -rwxr-xr-x 1 root root 1408088 Apr 24  2023 bash
+  -rwxr-xr-x 3 root root   38404 Sep 19  2022 bunzip2
+  -rwxr-xr-x 3 root root   38404 Sep 19  2022 bzcat
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzcmp -> bzdiff
+  -rwxr-xr-x 1 root root    2225 Sep 19  2022 bzdiff
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzegrep -> bzgrep
+  -rwxr-xr-x 1 root root    4893 Nov 28  2021 bzexe
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzfgrep -> bzgrep
+  -rwxr-xr-x 1 root root    3775 Sep 19  2022 bzgrep
+  -rwxr-xr-x 3 root root   38404 Sep 19  2022 bzip2
+  -rwxr-xr-x 1 root root   17892 Sep 19  2022 bzip2recover
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzless -> bzmore
+  -rwxr-xr-x 1 root root    1297 Sep 19  2022 bzmore
+  -rwxr-xr-x 1 root root   42920 Sep 21  2022 cat
+  -rwxr-xr-x 1 root root   79816 Sep 21  2022 chgrp
+  -rwxr-xr-x 1 root root   67496 Sep 21  2022 chmod
+  -rwxr-xr-x 1 root root   79816 Sep 21  2022 chown
+  -rwxr-xr-x 1 root root  162024 Sep 21  2022 cp
+  -rwxr-xr-x 1 root root  136916 Jan  6  2023 dash
+  -rwxr-xr-x 1 root root  137160 Sep 21  2022 date
+  -rwxr-xr-x 1 root root  100364 Sep 21  2022 dd
+  -rwxr-xr-x 1 root root  108940 Sep 21  2022 df
+  -rwxr-xr-x 1 root root  162152 Sep 21  2022 dir
+  -rwxr-xr-x 1 root root   87760 Mar 24  2023 dmesg
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 dnsdomainname -> hostname
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 domainname -> hostname
+  -rwxr-xr-x 1 root root   38760 Sep 21  2022 echo
+  -rwxr-xr-x 1 root root      41 Jan 25  2023 egrep
+  -rwxr-xr-x 1 root root   34664 Sep 21  2022 false
+  -rwxr-xr-x 1 root root      41 Jan 25  2023 fgrep
+  -rwxr-xr-x 1 root root   84272 Mar 24  2023 findmnt
+  -rwsr-xr-x 1 root root   30240 Mar 23  2023 fusermount
+  -rwxr-xr-x 1 root root  218680 Jan 25  2023 grep
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
+  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
+  -rwxr-xr-x 1 root root  100952 Apr 10  2022 gzip
+  -rwxr-xr-x 1 root root   21916 Dec 20  2022 hostname
+  -rwxr-xr-x 1 root root   75756 Sep 21  2022 ln
+  -rwxr-xr-x 1 root root   55600 Mar 24  2023 login
+  -rwxr-xr-x 1 root root  162152 Sep 21  2022 ls
+  -rwxr-xr-x 1 root root  214568 Mar 24  2023 lsblk
+  -rwxr-xr-x 1 root root   96328 Sep 21  2022 mkdir
+  -rwxr-xr-x 1 root root   84008 Sep 21  2022 mknod
+  -rwxr-xr-x 1 root root   38792 Sep 21  2022 mktemp
+  -rwxr-xr-x 1 root root   63016 Mar 24  2023 more
+  -rwsr-xr-x 1 root root   58912 Mar 24  2023 mount
+  -rwxr-xr-x 1 root root   13856 Mar 24  2023 mountpoint
+  -rwxr-xr-x 1 root root  157932 Sep 21  2022 mv
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 nisdomainname -> hostname
+  lrwxrwxrwx 1 root root      14 Apr  3  2023 pidof -> /sbin/killall5
+  -rwxr-xr-x 1 root root   38792 Sep 21  2022 pwd
+  lrwxrwxrwx 1 root root       4 Apr 24  2023 rbash -> bash
+  -rwxr-xr-x 1 root root   51080 Sep 21  2022 readlink
+  -rwxr-xr-x 1 root root   75720 Sep 21  2022 rm
+  -rwxr-xr-x 1 root root   51080 Sep 21  2022 rmdir
+  -rwxr-xr-x 1 root root   22308 Nov  3  2022 run-parts
+  -rwxr-xr-x 1 root root  133224 Jan  6  2023 sed
+  lrwxrwxrwx 1 root root       9 Jul 12 21:29 sh -> /bin/bash
+  -rwxr-xr-x 1 root root   38760 Sep 21  2022 sleep
+  -rwxr-xr-x 1 root root   87976 Sep 21  2022 stty
+  -rwsr-xr-x 1 root root   83492 Mar 24  2023 su
+  -rwxr-xr-x 1 root root   38792 Sep 21  2022 sync
+  -rwxr-xr-x 1 root root  598456 Apr  7  2023 tar
+  -rwxr-xr-x 1 root root   13860 Nov  3  2022 tempfile
+  -rwxr-xr-x 1 root root  120776 Sep 21  2022 touch
+  -rwxr-xr-x 1 root root   34664 Sep 21  2022 true
+  -rwxr-xr-x 1 root root   17892 Mar 23  2023 ulockmgr_server
+  -rwsr-xr-x 1 root root   30236 Mar 24  2023 umount
+  -rwxr-xr-x 1 root root   38760 Sep 21  2022 uname
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
+  -rwxr-xr-x 1 root root  162152 Sep 21  2022 vdir
+  -rwxr-xr-x 1 root root   71216 Mar 24  2023 wdctl
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 ypdomainname -> hostname
+  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
+  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
+  -rwxr-xr-x 1 root root    6460 Apr 10  2022 zdiff
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
+  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
+  -rwxr-xr-x 1 root root    8103 Apr 10  2022 zgrep
+  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
+  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
+  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -474,7 +506,7 @@
 Get: 213 http://deb.debian.org/debian bookworm/main i386 python3-sbml5 i386 5.19.7+dfsg-2 [3523 kB]
 Get: 214 http://deb.debian.org/debian bookworm/main i386 python3-simplejson i386 3.18.3-1 [61.0 kB]
 Get: 215 http://deb.debian.org/debian bookworm/main i386 python3-tabulate all 0.8.9-1 [35.2 kB]
-Fetched 139 MB in 8s (16.6 MB/s)
+Fetched 139 MB in 2s (79.0 MB/s)
 debconf: delaying package configuration, since apt-utils is not installed
 Selecting previously unselected package libpython3.11-minimal:i386.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19599 files and directories currently installed.)
@@ -1366,8 +1398,19 @@
 Writing extended state information...
 Building tag database...
  -> Finished parsing the build-deps
+Reading package lists...
+Building dependency tree...
+Reading state information...
+usrmerge is already the newest version (35).
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 I: Building the package
-I: Running cd /build/python-cobra-0.26.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../python-cobra_0.26.2-1_source.changes
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/A99_set_merged_usr starting
+Re-configuring usrmerge...
+removed '/etc/unsupported-skip-usrmerge-conversion'
+The system has been successfully converted.
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/python-cobra-0.26.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../python-cobra_0.26.2-1_source.changes
 dpkg-buildpackage: info: source package python-cobra
 dpkg-buildpackage: info: source version 0.26.2-1
 dpkg-buildpackage: info: source distribution unstable
@@ -1377,7 +1420,7 @@
  debian/rules clean
 dh clean --with python3 --buildsystem=pybuild
    debian/rules override_dh_auto_clean
-make[1]: Entering directory '/build/python-cobra-0.26.2'
+make[1]: Verzeichnis „/build/python-cobra-0.26.2“ wird betreten
 dh_auto_clean
 I: pybuild base:240: python3.11 setup.py clean 
 running clean
@@ -1386,7 +1429,7 @@
 'build/scripts-3.11' does not exist -- can't clean it
 rm -f cobra/solvers/cglpk.c
 rm -rf .pytest_cache
-make[1]: Leaving directory '/build/python-cobra-0.26.2'
+make[1]: Verzeichnis „/build/python-cobra-0.26.2“ wird verlassen
    dh_autoreconf_clean -O--buildsystem=pybuild
    dh_clean -O--buildsystem=pybuild
  debian/rules binary
@@ -1401,90 +1444,90 @@
 running build
 running build_py
 creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra
-copying src/cobra/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra
 copying src/cobra/exceptions.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra
+copying src/cobra/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra
 creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
-copying src/cobra/manipulation/validate.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
 copying src/cobra/manipulation/modify.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
-copying src/cobra/manipulation/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
 copying src/cobra/manipulation/annotate.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
 copying src/cobra/manipulation/delete.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
-creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
-copying src/cobra/medium/annotations.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
-copying src/cobra/medium/boundary_types.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
-copying src/cobra/medium/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
-copying src/cobra/medium/minimal_medium.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
-creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
-copying src/cobra/data/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
-creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
-copying src/cobra/summary/summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
-copying src/cobra/summary/model_summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
-copying src/cobra/summary/reaction_summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
-copying src/cobra/summary/metabolite_summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
-copying src/cobra/summary/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
-creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
-copying src/cobra/sampling/achr.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
-copying src/cobra/sampling/sampling.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
-copying src/cobra/sampling/core.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
-copying src/cobra/sampling/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
-copying src/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
-copying src/cobra/sampling/optgp.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
+copying src/cobra/manipulation/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
+copying src/cobra/manipulation/validate.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
+creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
+copying src/cobra/util/util.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
+copying src/cobra/util/process_pool.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
+copying src/cobra/util/context.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
+copying src/cobra/util/solver.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
+copying src/cobra/util/array.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
+copying src/cobra/util/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
 creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
-copying src/cobra/core/metabolite.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
+copying src/cobra/core/dictlist.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/solution.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
-copying src/cobra/core/singleton.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/object.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
-copying src/cobra/core/dictlist.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
+copying src/cobra/core/metabolite.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
+copying src/cobra/core/singleton.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
+copying src/cobra/core/configuration.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/formula.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
+copying src/cobra/core/model.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/species.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/group.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
-copying src/cobra/core/configuration.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/reaction.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
-copying src/cobra/core/model.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
 copying src/cobra/core/gene.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core
+creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
+copying src/cobra/data/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
 creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
 copying src/cobra/io/mat.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
-copying src/cobra/io/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
-copying src/cobra/io/yaml.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
 copying src/cobra/io/json.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
 copying src/cobra/io/dict.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
+copying src/cobra/io/yaml.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
+copying src/cobra/io/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
 copying src/cobra/io/sbml.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
+creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
+copying src/cobra/summary/summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
+copying src/cobra/summary/metabolite_summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
+copying src/cobra/summary/model_summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
+copying src/cobra/summary/reaction_summary.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
+copying src/cobra/summary/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary
+creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
+copying src/cobra/medium/annotations.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
+copying src/cobra/medium/boundary_types.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
+copying src/cobra/medium/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
+copying src/cobra/medium/minimal_medium.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium
 creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
-copying src/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
-copying src/cobra/flux_analysis/room.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
-copying src/cobra/flux_analysis/moma.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
 copying src/cobra/flux_analysis/fastcc.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
 copying src/cobra/flux_analysis/variability.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
+copying src/cobra/flux_analysis/moma.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
 copying src/cobra/flux_analysis/deletion.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
-copying src/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
 copying src/cobra/flux_analysis/helpers.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
+copying src/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
+copying src/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
+copying src/cobra/flux_analysis/gapfilling.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
+copying src/cobra/flux_analysis/room.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
 copying src/cobra/flux_analysis/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
 copying src/cobra/flux_analysis/geometric.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
-copying src/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
+copying src/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
 copying src/cobra/flux_analysis/reaction.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
-copying src/cobra/flux_analysis/gapfilling.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
-creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
-copying src/cobra/util/process_pool.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
-copying src/cobra/util/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
-copying src/cobra/util/solver.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
-copying src/cobra/util/array.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
-copying src/cobra/util/context.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
-copying src/cobra/util/util.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util
+creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
+copying src/cobra/sampling/achr.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
+copying src/cobra/sampling/optgp.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
+copying src/cobra/sampling/core.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
+copying src/cobra/sampling/sampling.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
+copying src/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
+copying src/cobra/sampling/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
 creating /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
-copying src/cobra/io/web/cobrapy_repository.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
 copying src/cobra/io/web/bigg_models_repository.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
-copying src/cobra/io/web/load.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
-copying src/cobra/io/web/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
-copying src/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
 copying src/cobra/io/web/abstract_model_repository.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
+copying src/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
+copying src/cobra/io/web/__init__.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
+copying src/cobra/io/web/cobrapy_repository.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
+copying src/cobra/io/web/load.py -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
 copying src/cobra/data/salmonella.xml.gz -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
-copying src/cobra/data/mini.json -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
 copying src/cobra/data/mini.yml -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
-copying src/cobra/data/iJO1366.xml.gz -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
-copying src/cobra/data/mini_cobra.xml -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
 copying src/cobra/data/textbook.xml.gz -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
+copying src/cobra/data/mini.json -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
 copying src/cobra/data/mini.mat -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
+copying src/cobra/data/mini_cobra.xml -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
+copying src/cobra/data/iJO1366.xml.gz -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data
 copying src/cobra/io/schema_v1.json -> /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io
    dh_auto_test -O--buildsystem=pybuild
 I: pybuild base:240: cd /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build; python3.11 -m pytest tests
@@ -1649,7 +1692,7 @@
   /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/solver.py:554: UserWarning: Solver status is 'infeasible'.
     warn(f"Solver status is '{status}'.", UserWarning)
 
-.pybuild/cpython3_3.11_cobra/build/tests/test_medium/test_minimal_medium.py: 74 warnings
+.pybuild/cpython3_3.11_cobra/build/tests/test_medium/test_minimal_medium.py: 146 warnings
   /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/minimal_medium.py:112: FutureWarning: The default dtype for empty Series will be 'object' instead of 'float64' in a future version. Specify a dtype explicitly to silence this warning.
     medium = pd.Series()
 
@@ -1663,46 +1706,46 @@
 
 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
 
-
Computing stats ...
Computing stats ... group 1/1
Computing stats ... group 1/1: min
Computing stats ... group 1/1: min (1/31)
Computing stats ... group 1/1: min (2/31)
Computing stats ... group 1/1: min (3/31)
Computing stats ... group 1/1: min (4/31)
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Computing stats ... group 1/1: min (23/31)
Computing stats ... group 1/1: min (24/31)
Computing stats ... group 1/1: min (25/31)
Computing stats ... group 1/1: min (26/31)
Computing stats ... group 1/1: min (27/31)
Computing stats ... group 1/1: min (28/31)
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Computing stats ... group 1/1: min (30/31)
Computing stats ... group 1/1: min (31/31)
Computing stats ... group 1/1: max
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Computing stats ... group 1/1: max (2/31)
Computing stats ... group 1/1: max (3/31)
Computing stats ... group 1/1: max (4/31)
Computing stats ... group 1/1: max (5/31)
Computing stats ... group 1/1: max (6/31)
Computing stats ... group 1/1: max (7/31)
Computing stats ... group 1/1: max (8/31)
Computing stats ... group 1/1: max (9/31)
Computing stats ... group 1/1: max (10/31)
Computing stats ... group 1/1: max (11/31)
Computing stats ... group 1/1: max (12/31)
Computing stats ... group 1/1: max (13/31)
Computing stats ... group 1/1: max (14/31)
Computing stats ... group 1/1: max (15/31)
Computing stats ... group 1/1: max (16/31)
Computing stats ... group 1/1: max (17/31)
Computing stats ... group 1/1: max (18/31)
Computing stats ... group 1/1: max (19/31)
Computing stats ... group 1/1: max (20/31)
Computing stats ... group 1/1: max (21/31)
Computing stats ... group 1/1: max (22/31)
Computing stats ... group 1/1: max (23/31)
Computing stats ... group 1/1: max (24/31)
Computing stats ... group 1/1: max (25/31)
Computing stats ... group 1/1: max (26/31)
Computing stats ... group 1/1: max (27/31)
Computing stats ... group 1/1: max (28/31)
Computing stats ... group 1/1: max (29/31)
Computing stats ... group 1/1: max (30/31)
Computing stats ... group 1/1: max (31/31)
Computing stats ... group 1/1: max (1/31)
Computing stats ... group 1/1: max (2/31)
Computing stats ... group 1/1: max (3/31)
Computing stats ... group 1/1: max (4/31)
Computing stats ... group 1/1: max (5/31)
Computing stats ... group 1/1: max (6/31)
Computing stats ... group 1/1: max (7/31)
Computing stats ... group 1/1: max (8/31)
Computing stats ... group 1/1: max (9/31)
Computing stats ... group 1/1: max (10/31)
Computing stats ... group 1/1: max (11/31)
Computing stats ... group 1/1: max (12/31)
Computing stats ... group 1/1: max (13/31)
Computing stats ... group 1/1: max (14/31)
Computing stats ... group 1/1: max (15/31)
Computing stats ... group 1/1: max (16/31)
Computing stats ... group 1/1: max (17/31)
Computing stats ... group 1/1: max (18/31)
Computing stats ... group 1/1: max (19/31)
Computing stats ... group 1/1: max (20/31)
Computing stats ... group 1/1: max (21/31)
Computing stats ... group 1/1: max (22/31)
Computing stats ... group 1/1: max (23/31)
Computing stats ... group 1/1: max (24/31)
Computing stats ... group 1/1: max (25/31)
Computing stats ... group 1/1: max (26/31)
Computing stats ... group 1/1: max (27/31)
Computing stats ... group 1/1: max (28/31)
Computing stats ... group 1/1: max (29/31)
Computing stats ... group 1/1: max (30/31)
Computing stats ... group 1/1: max (31/31)
Computing stats ... group 1/1: mean
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Computing stats ... group 1/1: mean (2/31)
Computing stats ... group 1/1: mean (3/31)
Computing stats ... group 1/1: mean (4/31)
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Computing stats ... group 1/1: mean (6/31)
Computing stats ... group 1/1: mean (7/31)
Computing stats ... group 1/1: mean (8/31)
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Computing stats ... group 1/1: mean (10/31)
Computing stats ... group 1/1: mean (11/31)
Computing stats ... group 1/1: mean (12/31)
Computing stats ... group 1/1: mean (13/31)
Computing stats ... group 1/1: mean (14/31)
Computing stats ... group 1/1: mean (15/31)
Computing stats ... group 1/1: mean (16/31)
Computing stats ... group 1/1: mean (17/31)
Computing stats ... group 1/1: mean (18/31)
Computing stats ... group 1/1: mean (19/31)
Computing stats ... group 1/1: mean (20/31)
Computing stats ... group 1/1: mean (21/31)
Computing stats ... group 1/1: mean (22/31)
Computing stats ... group 1/1: mean (23/31)
Computing stats ... group 1/1: mean (24/31)
Computing stats ... group 1/1: mean (25/31)
Computing stats ... group 1/1: mean (26/31)
Computing stats ... group 1/1: mean (27/31)
Computing stats ... group 1/1: mean (28/31)
Computing stats ... group 1/1: mean (29/31)
Computing stats ... group 1/1: mean (30/31)
Computing stats ... group 1/1: mean (31/31)
Computing stats ... group 1/1: mean (1/31)
Computing stats ... group 1/1: mean (2/31)
Computing stats ... group 1/1: mean (3/31)
Computing stats ... group 1/1: mean (4/31)
Computing stats ... group 1/1: mean (5/31)
Computing stats ... group 1/1: mean (6/31)
Computing stats ... group 1/1: mean (7/31)
Computing stats ... group 1/1: mean (8/31)
Computing stats ... group 1/1: mean (9/31)
Computing stats ... group 1/1: mean (10/31)
Computing stats ... group 1/1: mean (11/31)
Computing stats ... group 1/1: mean (12/31)
Computing stats ... group 1/1: mean (13/31)
Computing stats ... group 1/1: mean (14/31)
Computing stats ... group 1/1: mean (15/31)
Computing stats ... group 1/1: mean (16/31)
Computing stats ... group 1/1: mean (17/31)
Computing stats ... group 1/1: mean (18/31)
Computing stats ... group 1/1: mean (19/31)
Computing stats ... group 1/1: mean (20/31)
Computing stats ... group 1/1: mean (21/31)
Computing stats ... group 1/1: mean (22/31)
Computing stats ... group 1/1: mean (23/31)
Computing stats ... group 1/1: mean (24/31)
Computing stats ... group 1/1: mean (25/31)
Computing stats ... group 1/1: mean (26/31)
Computing stats ... group 1/1: mean (27/31)
Computing stats ... group 1/1: mean (28/31)
Computing stats ... group 1/1: mean (29/31)
Computing stats ... group 1/1: mean (30/31)
Computing stats ... group 1/1: mean (31/31)
Computing stats ... group 1/1: median
Computing stats ... group 1/1: median (1/31)
Computing stats ... group 1/1: median (2/31)
Computing stats ... group 1/1: median (3/31)
Computing stats ... group 1/1: median (4/31)
Computing stats ... group 1/1: median (5/31)
Computing stats ... group 1/1: median (6/31)
Computing stats ... group 1/1: median (7/31)
Computing stats ... group 1/1: median (8/31)
Computing stats ... group 1/1: median (9/31)
Computing stats ... group 1/1: median (10/31)
Computing stats ... group 1/1: median (11/31)
Computing stats ... group 1/1: median (12/31)
Computing stats ... group 1/1: median (13/31)
Computing stats ... group 1/1: median (14/31)
Computing stats ... group 1/1: median (15/31)
Computing stats ... group 1/1: median (16/31)
Computing stats ... group 1/1: median (17/31)
Computing stats ... group 1/1: median (18/31)
Computing stats ... group 1/1: median (19/31)
Computing stats ... group 1/1: median (20/31)
Computing stats ... group 1/1: median (21/31)
Computing stats ... group 1/1: median (22/31)
Computing stats ... group 1/1: median (23/31)
Computing stats ... group 1/1: median (24/31)
Computing stats ... group 1/1: median (25/31)
Computing stats ... group 1/1: median (26/31)
Computing stats ... group 1/1: median (27/31)
Computing stats ... group 1/1: median (28/31)
Computing stats ... group 1/1: median (29/31)
Computing stats ... group 1/1: median (30/31)
Computing stats ... group 1/1: median (31/31)
Computing stats ... group 1/1: median (1/31)
Computing stats ... group 1/1: median (2/31)
Computing stats ... group 1/1: median (3/31)
Computing stats ... group 1/1: median (4/31)
Computing stats ... group 1/1: median (5/31)
Computing stats ... group 1/1: median (6/31)
Computing stats ... group 1/1: median (7/31)
Computing stats ... group 1/1: median (8/31)
Computing stats ... group 1/1: median (9/31)
Computing stats ... group 1/1: median (10/31)
Computing stats ... group 1/1: median (11/31)
Computing stats ... group 1/1: median (12/31)
Computing stats ... group 1/1: median (13/31)
Computing stats ... group 1/1: median (14/31)
Computing stats ... group 1/1: median (15/31)
Computing stats ... group 1/1: median (16/31)
Computing stats ... group 1/1: median (17/31)
Computing stats ... group 1/1: median (18/31)
Computing stats ... group 1/1: median (19/31)
Computing stats ... group 1/1: median (20/31)
Computing stats ... group 1/1: median (21/31)
Computing stats ... group 1/1: median (22/31)
Computing stats ... group 1/1: median (23/31)
Computing stats ... group 1/1: median (24/31)
Computing stats ... group 1/1: median (25/31)
Computing stats ... group 1/1: median (26/31)
Computing stats ... group 1/1: median (27/31)
Computing stats ... group 1/1: median (28/31)
Computing stats ... group 1/1: median (29/31)
Computing stats ... group 1/1: median (30/31)
Computing stats ... group 1/1: median (31/31)
Computing stats ... group 1/1: iqr
Computing stats ... group 1/1: iqr (1/31)
Computing stats ... group 1/1: iqr (2/31)
Computing stats ... group 1/1: iqr (3/31)
Computing stats ... group 1/1: iqr (4/31)
Computing stats ... group 1/1: iqr (5/31)
Computing stats ... group 1/1: iqr (6/31)
Computing stats ... group 1/1: iqr (7/31)
Computing stats ... group 1/1: iqr (8/31)
Computing stats ... group 1/1: iqr (9/31)
Computing stats ... group 1/1: iqr (10/31)
Computing stats ... group 1/1: iqr (11/31)
Computing stats ... group 1/1: iqr (12/31)
Computing stats ... group 1/1: iqr (13/31)
Computing stats ... group 1/1: iqr (14/31)
Computing stats ... group 1/1: iqr (15/31)
Computing stats ... group 1/1: iqr (16/31)
Computing stats ... group 1/1: iqr (17/31)
Computing stats ... group 1/1: iqr (18/31)
Computing stats ... group 1/1: iqr (19/31)
Computing stats ... group 1/1: iqr (20/31)
Computing stats ... group 1/1: iqr (21/31)
Computing stats ... group 1/1: iqr (22/31)
Computing stats ... group 1/1: iqr (23/31)
Computing stats ... group 1/1: iqr (24/31)
Computing stats ... group 1/1: iqr (25/31)
Computing stats ... group 1/1: iqr (26/31)
Computing stats ... group 1/1: iqr (27/31)
Computing stats ... group 1/1: iqr (28/31)
Computing stats ... group 1/1: iqr (29/31)
Computing stats ... group 1/1: iqr (30/31)
Computing stats ... group 1/1: iqr (31/31)
Computing stats ... group 1/1: iqr (1/31)
Computing stats ... group 1/1: iqr (2/31)
Computing stats ... group 1/1: iqr (3/31)
Computing stats ... group 1/1: iqr (4/31)
Computing stats ... group 1/1: iqr (5/31)
Computing stats ... group 1/1: iqr (6/31)
Computing stats ... group 1/1: iqr (7/31)
Computing stats ... group 1/1: iqr (8/31)
Computing stats ... group 1/1: iqr (9/31)
Computing stats ... group 1/1: iqr (10/31)
Computing stats ... group 1/1: iqr (11/31)
Computing stats ... group 1/1: iqr (12/31)
Computing stats ... group 1/1: iqr (13/31)
Computing stats ... group 1/1: iqr (14/31)
Computing stats ... group 1/1: iqr (15/31)
Computing stats ... group 1/1: iqr (16/31)
Computing stats ... group 1/1: iqr (17/31)
Computing stats ... group 1/1: iqr (18/31)
Computing stats ... group 1/1: iqr (19/31)
Computing stats ... group 1/1: iqr (20/31)
Computing stats ... group 1/1: iqr (21/31)
Computing stats ... group 1/1: iqr (22/31)
Computing stats ... group 1/1: iqr (23/31)
Computing stats ... group 1/1: iqr (24/31)
Computing stats ... group 1/1: iqr (25/31)
Computing stats ... group 1/1: iqr (26/31)
Computing stats ... group 1/1: iqr (27/31)
Computing stats ... group 1/1: iqr (28/31)
Computing stats ... group 1/1: iqr (29/31)
Computing stats ... group 1/1: iqr (30/31)
Computing stats ... group 1/1: iqr (31/31)
Computing stats ... group 1/1: stddev
Computing stats ... group 1/1: stddev (1/31)
Computing stats ... group 1/1: stddev (2/31)
Computing stats ... group 1/1: stddev (3/31)
Computing stats ... group 1/1: stddev (4/31)
Computing stats ... group 1/1: stddev (5/31)
Computing stats ... group 1/1: stddev (6/31)
Computing stats ... group 1/1: stddev (7/31)
Computing stats ... group 1/1: stddev (8/31)
Computing stats ... group 1/1: stddev (9/31)
Computing stats ... group 1/1: stddev (10/31)
Computing stats ... group 1/1: stddev (11/31)
Computing stats ... group 1/1: stddev (12/31)
Computing stats ... group 1/1: stddev (13/31)
Computing stats ... group 1/1: stddev (14/31)
Computing stats ... group 1/1: stddev (15/31)
Computing stats ... group 1/1: stddev (16/31)
Computing stats ... group 1/1: stddev (17/31)
Computing stats ... group 1/1: stddev (18/31)
Computing stats ... group 1/1: stddev (19/31)
Computing stats ... group 1/1: stddev (20/31)
Computing stats ... group 1/1: stddev (21/31)
Computing stats ... group 1/1: stddev (22/31)
Computing stats ... group 1/1: stddev (23/31)
Computing stats ... group 1/1: stddev (24/31)
Computing stats ... group 1/1: stddev (25/31)
Computing stats ... group 1/1: stddev (26/31)
Computing stats ... group 1/1: stddev (27/31)
Computing stats ... group 1/1: stddev (28/31)
Computing stats ... group 1/1: stddev (29/31)
Computing stats ... group 1/1: stddev (30/31)
Computing stats ... group 1/1: stddev (31/31)
Computing stats ... group 1/1: stddev (1/31)
Computing stats ... group 1/1: stddev (2/31)
Computing stats ... group 1/1: stddev (3/31)
Computing stats ... group 1/1: stddev (4/31)
Computing stats ... group 1/1: stddev (5/31)
Computing stats ... group 1/1: stddev (6/31)
Computing stats ... group 1/1: stddev (7/31)
Computing stats ... group 1/1: stddev (8/31)
Computing stats ... group 1/1: stddev (9/31)
Computing stats ... group 1/1: stddev (10/31)
Computing stats ... group 1/1: stddev (11/31)
Computing stats ... group 1/1: stddev (12/31)
Computing stats ... group 1/1: stddev (13/31)
Computing stats ... group 1/1: stddev (14/31)
Computing stats ... group 1/1: stddev (15/31)
Computing stats ... group 1/1: stddev (16/31)
Computing stats ... group 1/1: stddev (17/31)
Computing stats ... group 1/1: stddev (18/31)
Computing stats ... group 1/1: stddev (19/31)
Computing stats ... group 1/1: stddev (20/31)
Computing stats ... group 1/1: stddev (21/31)
Computing stats ... group 1/1: stddev (22/31)
Computing stats ... group 1/1: stddev (23/31)
Computing stats ... group 1/1: stddev (24/31)
Computing stats ... group 1/1: stddev (25/31)
Computing stats ... group 1/1: stddev (26/31)
Computing stats ... group 1/1: stddev (27/31)
Computing stats ... group 1/1: stddev (28/31)
Computing stats ... group 1/1: stddev (29/31)
Computing stats ... group 1/1: stddev (30/31)
Computing stats ... group 1/1: stddev (31/31)
Computing stats ... group 1/1: ops
Computing stats ... group 1/1: ops (1/31)
Computing stats ... group 1/1: ops (2/31)
Computing stats ... group 1/1: ops (3/31)
Computing stats ... group 1/1: ops (4/31)
Computing stats ... group 1/1: ops (5/31)
Computing stats ... group 1/1: ops (6/31)
Computing stats ... group 1/1: ops (7/31)
Computing stats ... group 1/1: ops (8/31)
Computing stats ... group 1/1: ops (9/31)
Computing stats ... group 1/1: ops (10/31)
Computing stats ... group 1/1: ops (11/31)
Computing stats ... group 1/1: ops (12/31)
Computing stats ... group 1/1: ops (13/31)
Computing stats ... group 1/1: ops (14/31)
Computing stats ... group 1/1: ops (15/31)
Computing stats ... group 1/1: ops (16/31)
Computing stats ... group 1/1: ops (17/31)
Computing stats ... group 1/1: ops (18/31)
Computing stats ... group 1/1: ops (19/31)
Computing stats ... group 1/1: ops (20/31)
Computing stats ... group 1/1: ops (21/31)
Computing stats ... group 1/1: ops (22/31)
Computing stats ... group 1/1: ops (23/31)
Computing stats ... group 1/1: ops (24/31)
Computing stats ... group 1/1: ops (25/31)
Computing stats ... group 1/1: ops (26/31)
Computing stats ... group 1/1: ops (27/31)
Computing stats ... group 1/1: ops (28/31)
Computing stats ... group 1/1: ops (29/31)
Computing stats ... group 1/1: ops (30/31)
Computing stats ... group 1/1: ops (31/31)
Computing stats ... group 1/1: ops (1/31)
Computing stats ... group 1/1: ops (2/31)
Computing stats ... group 1/1: ops (3/31)
Computing stats ... group 1/1: ops (4/31)
Computing stats ... group 1/1: ops (5/31)
Computing stats ... group 1/1: ops (6/31)
Computing stats ... group 1/1: ops (7/31)
Computing stats ... group 1/1: ops (8/31)
Computing stats ... group 1/1: ops (9/31)
Computing stats ... group 1/1: ops (10/31)
Computing stats ... group 1/1: ops (11/31)
Computing stats ... group 1/1: ops (12/31)
Computing stats ... group 1/1: ops (13/31)
Computing stats ... group 1/1: ops (14/31)
Computing stats ... group 1/1: ops (15/31)
Computing stats ... group 1/1: ops (16/31)
Computing stats ... group 1/1: ops (17/31)
Computing stats ... group 1/1: ops (18/31)
Computing stats ... group 1/1: ops (19/31)
Computing stats ... group 1/1: ops (20/31)
Computing stats ... group 1/1: ops (21/31)
Computing stats ... group 1/1: ops (22/31)
Computing stats ... group 1/1: ops (23/31)
Computing stats ... group 1/1: ops (24/31)
Computing stats ... group 1/1: ops (25/31)
Computing stats ... group 1/1: ops (26/31)
Computing stats ... group 1/1: ops (27/31)
Computing stats ... group 1/1: ops (28/31)
Computing stats ... group 1/1: ops (29/31)
Computing stats ... group 1/1: ops (30/31)
Computing stats ... group 1/1: ops (31/31)
Computing stats ... group 1/1: ops: outliers
Computing stats ... group 1/1: ops: outliers (1/31)
Computing stats ... group 1/1: ops: outliers (2/31)
Computing stats ... group 1/1: ops: outliers (3/31)
Computing stats ... group 1/1: ops: outliers (4/31)
Computing stats ... group 1/1: ops: outliers (5/31)
Computing stats ... group 1/1: ops: outliers (6/31)
Computing stats ... group 1/1: ops: outliers (7/31)
Computing stats ... group 1/1: ops: outliers (8/31)
Computing stats ... group 1/1: ops: outliers (9/31)
Computing stats ... group 1/1: ops: outliers (10/31)
Computing stats ... group 1/1: ops: outliers (11/31)
Computing stats ... group 1/1: ops: outliers (12/31)
Computing stats ... group 1/1: ops: outliers (13/31)
Computing stats ... group 1/1: ops: outliers (14/31)
Computing stats ... group 1/1: ops: outliers (15/31)
Computing stats ... group 1/1: ops: outliers (16/31)
Computing stats ... group 1/1: ops: outliers (17/31)
Computing stats ... group 1/1: ops: outliers (18/31)
Computing stats ... group 1/1: ops: outliers (19/31)
Computing stats ... group 1/1: ops: outliers (20/31)
Computing stats ... group 1/1: ops: outliers (21/31)
Computing stats ... group 1/1: ops: outliers (22/31)
Computing stats ... group 1/1: ops: outliers (23/31)
Computing stats ... group 1/1: ops: outliers (24/31)
Computing stats ... group 1/1: ops: outliers (25/31)
Computing stats ... group 1/1: ops: outliers (26/31)
Computing stats ... group 1/1: ops: outliers (27/31)
Computing stats ... group 1/1: ops: outliers (28/31)
Computing stats ... group 1/1: ops: outliers (29/31)
Computing stats ... group 1/1: ops: outliers (30/31)
Computing stats ... group 1/1: ops: outliers (31/31)
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------------------------------------------------------------------------------------------------------------------------ benchmark: 31 tests ------------------------------------------------------------------------------------------------------------------------
-Name (time in us)                                                    Min                       Max                      Mean                  StdDev                    Median                     IQR            Outliers          OPS            Rounds  Iterations
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-test_subtract_metabolite_benchmark[glpk]                         11.0530 (1.0)            310.7280 (1.30)            13.0347 (1.01)           7.6229 (1.46)            13.0440 (1.08)           1.8190 (1.01)        25;59  76,718.5623 (0.99)       2289           1
-test_subtract_metabolite_benchmark[cplex]                        11.0980 (1.00)           238.6620 (1.0)             13.0680 (1.01)           5.2118 (1.0)             13.1970 (1.10)           1.7970 (1.0)         33;70  76,522.7262 (0.99)       2329           1
-test_subtract_metabolite_benchmark[gurobi]                       11.1520 (1.01)           266.0280 (1.11)            12.9424 (1.0)            5.8013 (1.11)            12.0250 (1.0)            1.8320 (1.02)        47;80  77,265.1367 (1.0)        2326           1
-test_achr_sample_benchmark                                      588.6300 (53.26)          982.7240 (4.12)           680.3987 (52.57)         71.5580 (13.73)          683.6850 (56.86)         65.4868 (36.44)      198;50   1,469.7266 (0.02)        699           1
-test_change_objective_benchmark[optlang-glpk]                   616.3400 (55.76)       10,794.0950 (45.23)          808.2013 (62.45)        433.0104 (83.08)          783.1115 (65.12)        101.5710 (56.52)        9;22   1,237.3155 (0.02)       1792           1
-test_optgp_sample_benchmark                                     867.3860 (78.47)        5,366.7470 (22.49)        1,098.1933 (84.85)        377.5879 (72.45)        1,062.4610 (88.35)        115.0312 (64.01)         5;9     910.5865 (0.01)        617           1
-test_loopless_benchmark_after                                 3,026.6160 (273.83)       3,808.4170 (15.96)        3,215.7130 (248.46)       123.1783 (23.63)        3,196.3710 (265.81)       144.4980 (80.41)        27;6     310.9730 (0.00)        142           1
-test_loopless_benchmark_before                               15,663.5940 (>1000.0)     17,024.9160 (71.33)       16,060.5537 (>1000.0)      251.7662 (48.31)       15,999.9170 (>1000.0)      293.0828 (163.10)       10;1      62.2644 (0.00)         43           1
-test_minimal_medium_linear_benchmark                         17,979.4020 (>1000.0)     21,733.3580 (91.06)       20,165.3811 (>1000.0)    1,347.4107 (258.53)      20,618.2270 (>1000.0)    2,778.5825 (>1000.0)      13;0      49.5899 (0.00)         31           1
-test_minimal_medium_mip_benchmark                            19,343.1460 (>1000.0)     21,472.5240 (89.97)       20,689.0086 (>1000.0)      553.9739 (106.29)      20,858.8150 (>1000.0)      816.9745 (454.63)        9;0      48.3348 (0.00)         28           1
-test_single_reaction_deletion_benchmark[glpk]                50,295.0180 (>1000.0)     57,090.5710 (239.21)      54,024.3042 (>1000.0)    1,904.3582 (365.40)      54,441.6265 (>1000.0)    1,937.8980 (>1000.0)       5;0      18.5102 (0.00)         18           1
-test_copy_benchmark[optlang-glpk]                            60,204.1620 (>1000.0)     64,217.2520 (269.07)      61,909.1635 (>1000.0)    1,351.2366 (259.27)      61,245.9345 (>1000.0)    2,435.0745 (>1000.0)       5;0      16.1527 (0.00)         16           1
-test_gpr_equality_benchmark                                  80,496.2820 (>1000.0)     82,516.9680 (345.75)      81,183.3109 (>1000.0)      576.7876 (110.67)      81,311.1700 (>1000.0)      741.7300 (412.76)        3;1      12.3178 (0.00)         11           1
-test_deepcopy_benchmark                                      93,907.4460 (>1000.0)    110,907.9820 (464.71)      98,858.9696 (>1000.0)    4,813.8721 (923.65)      97,717.4370 (>1000.0)    3,914.4383 (>1000.0)       3;1      10.1154 (0.00)         11           1
-test_fastcc_benchmark[glpk]                                 200,095.2930 (>1000.0)    213,498.1490 (894.56)     204,116.2328 (>1000.0)    5,722.5247 (>1000.0)    200,905.4750 (>1000.0)    7,344.7948 (>1000.0)       1;0       4.8992 (0.00)          5           1
-test_add_metabolite_benchmark[gurobi]                       212,151.0760 (>1000.0)    216,937.6530 (908.97)     214,779.2312 (>1000.0)    1,719.5875 (329.94)     214,832.1010 (>1000.0)    1,636.8597 (910.89)        2;0       4.6559 (0.00)          5           1
-test_add_metabolite_benchmark[glpk]                         215,276.3490 (>1000.0)    217,378.6680 (910.82)     216,787.1310 (>1000.0)      890.2397 (170.81)     217,298.9720 (>1000.0)      991.2548 (551.62)        1;0       4.6128 (0.00)          5           1
-test_add_metabolite_benchmark[cplex]                        215,636.1820 (>1000.0)    216,804.1420 (908.41)     216,142.9270 (>1000.0)      572.4167 (109.83)     215,822.5540 (>1000.0)    1,042.1752 (579.95)        2;0       4.6266 (0.00)          5           1
-test_achr_init_benchmark                                    256,098.3050 (>1000.0)    281,993.6780 (>1000.0)    270,049.2826 (>1000.0)    9,422.4478 (>1000.0)    269,818.2520 (>1000.0)   10,619.2342 (>1000.0)       2;0       3.7030 (0.00)          5           1
-test_single_gene_deletion_fba_benchmark[glpk]               257,878.4320 (>1000.0)    317,908.8760 (>1000.0)    292,165.2466 (>1000.0)   29,224.8387 (>1000.0)    309,528.3600 (>1000.0)   52,322.2237 (>1000.0)       2;0       3.4227 (0.00)          5           1
-test_optgp_init_benchmark                                   263,363.8630 (>1000.0)    280,372.7150 (>1000.0)    274,133.5892 (>1000.0)    6,463.5773 (>1000.0)    276,222.1810 (>1000.0)    6,588.9692 (>1000.0)       1;0       3.6479 (0.00)          5           1
-test_double_gene_deletion_benchmark                         348,868.2830 (>1000.0)    372,713.8180 (>1000.0)    365,387.3720 (>1000.0)    9,585.1553 (>1000.0)    369,409.1380 (>1000.0)    9,542.6015 (>1000.0)       1;0       2.7368 (0.00)          5           1
-test_gpr_symbolism_benchmark                                610,954.5410 (>1000.0)    620,776.5370 (>1000.0)    615,750.8548 (>1000.0)    3,761.1599 (721.67)     616,431.0880 (>1000.0)    5,349.9125 (>1000.0)       2;0       1.6240 (0.00)          5           1
-test_single_gene_deletion_linear_moma_benchmark[glpk]       699,605.3540 (>1000.0)    715,215.3290 (>1000.0)    709,145.0216 (>1000.0)    6,146.1014 (>1000.0)    708,680.7480 (>1000.0)    8,050.2135 (>1000.0)       1;0       1.4101 (0.00)          5           1
-test_pfba_benchmark[glpk]                                   872,783.9080 (>1000.0)  1,126,684.0440 (>1000.0)    932,151.5100 (>1000.0)  109,367.3931 (>1000.0)    879,624.4100 (>1000.0)   81,964.8050 (>1000.0)       1;1       1.0728 (0.00)          5           1
-test_single_gene_deletion_linear_room_benchmark[glpk]       986,357.3040 (>1000.0)  1,513,294.3700 (>1000.0)  1,125,609.9702 (>1000.0)  218,181.4730 (>1000.0)  1,039,049.7830 (>1000.0)  143,746.3100 (>1000.0)       1;1       0.8884 (0.00)          5           1
-test_flux_variability_loopless_benchmark[glpk]            1,107,852.8040 (>1000.0)  1,208,472.5760 (>1000.0)  1,164,137.0912 (>1000.0)   41,488.4196 (>1000.0)  1,175,128.5730 (>1000.0)   67,981.5683 (>1000.0)       2;0       0.8590 (0.00)          5           1
-test_geometric_fba_benchmark[glpk]                        1,118,969.0550 (>1000.0)  1,227,831.4390 (>1000.0)  1,191,308.4818 (>1000.0)   42,864.2448 (>1000.0)  1,210,678.0380 (>1000.0)   44,709.2448 (>1000.0)       1;0       0.8394 (0.00)          5           1
-test_copy_benchmark_large_model[optlang-glpk]             1,498,517.4600 (>1000.0)  2,122,590.8500 (>1000.0)  1,814,414.8676 (>1000.0)  277,958.6913 (>1000.0)  1,914,524.8950 (>1000.0)  491,412.9197 (>1000.0)       2;0       0.5511 (0.00)          5           1
-test_double_reaction_deletion_benchmark                   2,371,834.4360 (>1000.0)  2,611,782.9010 (>1000.0)  2,471,140.7656 (>1000.0)   87,875.4307 (>1000.0)  2,455,957.6330 (>1000.0)   87,521.3982 (>1000.0)       2;0       0.4047 (0.00)          5           1
-test_flux_variability_benchmark[glpk]                     5,378,150.9990 (>1000.0)  5,686,208.0550 (>1000.0)  5,524,286.7778 (>1000.0)  117,872.6600 (>1000.0)  5,490,747.5290 (>1000.0)  163,957.4200 (>1000.0)       2;0       0.1810 (0.00)          5           1
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Computing stats ... group 1/1: iqr
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Computing stats ... group 1/1: stddev
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Computing stats ... group 1/1: ops
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Computing stats ... group 1/1: ops: outliers
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Computing stats ... group 1/1: ops: outliers (13/31)
Computing stats ... group 1/1: ops: outliers (14/31)
Computing stats ... group 1/1: ops: outliers (15/31)
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Computing stats ... group 1/1: ops: outliers (17/31)
Computing stats ... group 1/1: ops: outliers (18/31)
Computing stats ... group 1/1: ops: outliers (19/31)
Computing stats ... group 1/1: ops: outliers (20/31)
Computing stats ... group 1/1: ops: outliers (21/31)
Computing stats ... group 1/1: ops: outliers (22/31)
Computing stats ... group 1/1: ops: outliers (23/31)
Computing stats ... group 1/1: ops: outliers (24/31)
Computing stats ... group 1/1: ops: outliers (25/31)
Computing stats ... group 1/1: ops: outliers (26/31)
Computing stats ... group 1/1: ops: outliers (27/31)
Computing stats ... group 1/1: ops: outliers (28/31)
Computing stats ... group 1/1: ops: outliers (29/31)
Computing stats ... group 1/1: ops: outliers (30/31)
Computing stats ... group 1/1: ops: outliers (31/31)
Computing stats ... group 1/1: ops: rounds
Computing stats ... group 1/1: ops: rounds (1/31)
Computing stats ... group 1/1: ops: rounds (2/31)
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Computing stats ... group 1/1: ops: rounds (10/31)
Computing stats ... group 1/1: ops: rounds (11/31)
Computing stats ... group 1/1: ops: rounds (12/31)
Computing stats ... group 1/1: ops: rounds (13/31)
Computing stats ... group 1/1: ops: rounds (14/31)
Computing stats ... group 1/1: ops: rounds (15/31)
Computing stats ... group 1/1: ops: rounds (16/31)
Computing stats ... group 1/1: ops: rounds (17/31)
Computing stats ... group 1/1: ops: rounds (18/31)
Computing stats ... group 1/1: ops: rounds (19/31)
Computing stats ... group 1/1: ops: rounds (20/31)
Computing stats ... group 1/1: ops: rounds (21/31)
Computing stats ... group 1/1: ops: rounds (22/31)
Computing stats ... group 1/1: ops: rounds (23/31)
Computing stats ... group 1/1: ops: rounds (24/31)
Computing stats ... group 1/1: ops: rounds (25/31)
Computing stats ... group 1/1: ops: rounds (26/31)
Computing stats ... group 1/1: ops: rounds (27/31)
Computing stats ... group 1/1: ops: rounds (28/31)
Computing stats ... group 1/1: ops: rounds (29/31)
Computing stats ... group 1/1: ops: rounds (30/31)
Computing stats ... group 1/1: ops: rounds (31/31)
Computing stats ... group 1/1: ops: iterations
Computing stats ... group 1/1: ops: iterations (1/31)
Computing stats ... group 1/1: ops: iterations (2/31)
Computing stats ... group 1/1: ops: iterations (3/31)
Computing stats ... group 1/1: ops: iterations (4/31)
Computing stats ... group 1/1: ops: iterations (5/31)
Computing stats ... group 1/1: ops: iterations (6/31)
Computing stats ... group 1/1: ops: iterations (7/31)
Computing stats ... group 1/1: ops: iterations (8/31)
Computing stats ... group 1/1: ops: iterations (9/31)
Computing stats ... group 1/1: ops: iterations (10/31)
Computing stats ... group 1/1: ops: iterations (11/31)
Computing stats ... group 1/1: ops: iterations (12/31)
Computing stats ... group 1/1: ops: iterations (13/31)
Computing stats ... group 1/1: ops: iterations (14/31)
Computing stats ... group 1/1: ops: iterations (15/31)
Computing stats ... group 1/1: ops: iterations (16/31)
Computing stats ... group 1/1: ops: iterations (17/31)
Computing stats ... group 1/1: ops: iterations (18/31)
Computing stats ... group 1/1: ops: iterations (19/31)
Computing stats ... group 1/1: ops: iterations (20/31)
Computing stats ... group 1/1: ops: iterations (21/31)
Computing stats ... group 1/1: ops: iterations (22/31)
Computing stats ... group 1/1: ops: iterations (23/31)
Computing stats ... group 1/1: ops: iterations (24/31)
Computing stats ... group 1/1: ops: iterations (25/31)
Computing stats ... group 1/1: ops: iterations (26/31)
Computing stats ... group 1/1: ops: iterations (27/31)
Computing stats ... group 1/1: ops: iterations (28/31)
Computing stats ... group 1/1: ops: iterations (29/31)
Computing stats ... group 1/1: ops: iterations (30/31)
Computing stats ... group 1/1: ops: iterations (31/31)
------------------------------------------------------------------------------------------------------------------------ benchmark: 31 tests -------------------------------------------------------------------------------------------------------------------------
+Name (time in us)                                                    Min                       Max                      Mean                  StdDev                    Median                     IQR            Outliers           OPS            Rounds  Iterations
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+test_subtract_metabolite_benchmark[cplex]                         3.7960 (1.0)             18.9670 (1.0)              4.1352 (1.00)           0.6179 (1.0)              4.0640 (1.00)           0.1070 (1.11)       79;124  241,827.9368 (1.00)       4384           1
+test_subtract_metabolite_benchmark[glpk]                          3.8560 (1.02)           204.6930 (10.79)            4.1739 (1.01)           3.5411 (5.73)             4.0640 (1.00)           0.0990 (1.03)       16;102  239,581.7599 (0.99)       4266           1
+test_subtract_metabolite_benchmark[gurobi]                        3.8590 (1.02)           227.4680 (11.99)            4.1264 (1.0)            3.4078 (5.52)             4.0470 (1.0)            0.0960 (1.0)         12;89  242,340.8280 (1.0)        4366           1
+test_achr_sample_benchmark                                      362.3500 (95.46)          494.9370 (26.09)          372.7371 (90.33)          9.9947 (16.18)          368.9155 (91.16)          6.6510 (69.28)     190;173    2,682.8563 (0.01)       1094           1
+test_change_objective_benchmark[optlang-glpk]                   365.1320 (96.19)        8,444.2180 (445.21)         604.5697 (146.51)       181.5958 (293.91)         645.8110 (159.58)        73.2270 (762.78)    566;592    1,654.0689 (0.01)       2991           1
+test_optgp_sample_benchmark                                     504.2400 (132.83)         582.1400 (30.69)          513.7228 (124.50)         9.4634 (15.32)          510.2255 (126.07)         4.2185 (43.94)     200;213    1,946.5749 (0.01)       1248           1
+test_loopless_benchmark_after                                 2,827.5840 (744.89)       3,432.0000 (180.95)       3,239.0649 (784.96)       104.8606 (169.72)       3,253.3080 (803.88)       143.1790 (>1000.0)      49;2      308.7311 (0.00)        148           1
+test_minimal_medium_mip_benchmark                             9,235.2650 (>1000.0)     11,597.8260 (611.47)       9,497.8490 (>1000.0)      292.8980 (474.05)       9,495.4220 (>1000.0)      252.6345 (>1000.0)       1;1      105.2870 (0.00)         67           1
+test_minimal_medium_linear_benchmark                          9,406.6380 (>1000.0)      9,846.7720 (519.15)       9,631.7824 (>1000.0)      123.7069 (200.22)       9,623.4525 (>1000.0)      216.6850 (>1000.0)      26;0      103.8229 (0.00)         64           1
+test_loopless_benchmark_before                               14,399.4480 (>1000.0)     15,607.8360 (822.89)      14,981.9766 (>1000.0)      290.4174 (470.04)      14,977.7650 (>1000.0)      449.6708 (>1000.0)      18;0       66.7469 (0.00)         47           1
+test_single_reaction_deletion_benchmark[glpk]                20,587.5690 (>1000.0)     23,624.5980 (>1000.0)     21,787.4571 (>1000.0)      568.0912 (919.45)      21,684.4620 (>1000.0)      514.8332 (>1000.0)       9;5       45.8980 (0.00)         45           1
+test_copy_benchmark[optlang-glpk]                            27,762.0810 (>1000.0)    330,387.1000 (>1000.0)     47,586.0881 (>1000.0)   50,682.7797 (>1000.0)     29,794.5570 (>1000.0)   24,942.7822 (>1000.0)       1;1       21.0145 (0.00)         35           1
+test_deepcopy_benchmark                                      40,349.8040 (>1000.0)    468,202.3970 (>1000.0)     94,500.6505 (>1000.0)  103,875.3252 (>1000.0)     71,878.2790 (>1000.0)    5,463.4833 (>1000.0)       1;4       10.5819 (0.00)         15           1
+test_gpr_equality_benchmark                                  68,565.5570 (>1000.0)     71,274.6080 (>1000.0)     70,291.6315 (>1000.0)      683.6364 (>1000.0)     70,482.1170 (>1000.0)      274.2183 (>1000.0)       3;3       14.2264 (0.00)         13           1
+test_add_metabolite_benchmark[gurobi]                        80,109.9330 (>1000.0)    118,428.6490 (>1000.0)     85,069.4499 (>1000.0)   13,481.5495 (>1000.0)     80,209.3345 (>1000.0)      481.8150 (>1000.0)       1;1       11.7551 (0.00)          8           1
+test_add_metabolite_benchmark[glpk]                          80,859.6800 (>1000.0)    123,510.3420 (>1000.0)     89,249.7186 (>1000.0)   12,397.9139 (>1000.0)     82,087.2200 (>1000.0)   14,577.6253 (>1000.0)       1;1       11.2045 (0.00)         13           1
+test_add_metabolite_benchmark[cplex]                         81,967.1110 (>1000.0)    167,958.1460 (>1000.0)    127,099.6600 (>1000.0)   32,557.0184 (>1000.0)    124,684.2110 (>1000.0)   58,162.6503 (>1000.0)       5;0        7.8678 (0.00)          9           1
+test_fastcc_benchmark[glpk]                                  95,326.6240 (>1000.0)    179,770.0790 (>1000.0)    147,640.9142 (>1000.0)   29,684.4675 (>1000.0)    155,441.4320 (>1000.0)   29,868.2680 (>1000.0)       4;0        6.7732 (0.00)         10           1
+test_optgp_init_benchmark                                   106,016.5010 (>1000.0)    111,251.7980 (>1000.0)    107,939.3753 (>1000.0)    1,791.4393 (>1000.0)    107,528.6470 (>1000.0)    2,452.4450 (>1000.0)       3;0        9.2645 (0.00)         10           1
+test_achr_init_benchmark                                    108,245.7330 (>1000.0)    407,263.2260 (>1000.0)    142,478.5567 (>1000.0)   99,300.6612 (>1000.0)    109,069.7400 (>1000.0)    2,249.0463 (>1000.0)       1;1        7.0186 (0.00)          9           1
+test_double_gene_deletion_benchmark                         173,392.9810 (>1000.0)    226,555.7030 (>1000.0)    201,119.7688 (>1000.0)   24,423.7067 (>1000.0)    204,943.6940 (>1000.0)   46,059.9430 (>1000.0)       2;0        4.9722 (0.00)          5           1
+test_gpr_symbolism_benchmark                                282,994.3440 (>1000.0)    500,162.0610 (>1000.0)    349,042.4124 (>1000.0)   96,785.8071 (>1000.0)    284,687.8910 (>1000.0)  135,861.9487 (>1000.0)       1;0        2.8650 (0.00)          5           1
+test_single_gene_deletion_fba_benchmark[glpk]               284,268.5870 (>1000.0)    364,541.5400 (>1000.0)    304,833.8876 (>1000.0)   33,651.3958 (>1000.0)    289,923.3630 (>1000.0)   25,457.3887 (>1000.0)       1;1        3.2805 (0.00)          5           1
+test_single_gene_deletion_linear_moma_benchmark[glpk]       374,825.0630 (>1000.0)    496,929.9380 (>1000.0)    466,296.0550 (>1000.0)   51,525.4010 (>1000.0)    488,840.6400 (>1000.0)   39,568.2218 (>1000.0)       1;1        2.1446 (0.00)          5           1
+test_single_gene_deletion_linear_room_benchmark[glpk]       459,282.0210 (>1000.0)    741,649.6420 (>1000.0)    580,619.8026 (>1000.0)  140,786.2249 (>1000.0)    517,170.2960 (>1000.0)  267,090.5597 (>1000.0)       2;0        1.7223 (0.00)          5           1
+test_pfba_benchmark[glpk]                                   562,294.0110 (>1000.0)    636,736.7420 (>1000.0)    595,193.1724 (>1000.0)   35,769.3418 (>1000.0)    583,328.8450 (>1000.0)   67,946.9353 (>1000.0)       1;0        1.6801 (0.00)          5           1
+test_copy_benchmark_large_model[optlang-glpk]               728,102.5340 (>1000.0)  1,455,399.9800 (>1000.0)  1,144,990.9760 (>1000.0)  295,131.0045 (>1000.0)  1,084,217.3630 (>1000.0)  442,883.1758 (>1000.0)       2;0        0.8734 (0.00)          5           1
+test_geometric_fba_benchmark[glpk]                          777,480.5690 (>1000.0)    856,194.7330 (>1000.0)    805,962.1682 (>1000.0)   30,289.5780 (>1000.0)    801,016.1390 (>1000.0)   33,493.8560 (>1000.0)       1;0        1.2408 (0.00)          5           1
+test_flux_variability_loopless_benchmark[glpk]              998,911.7160 (>1000.0)  1,246,421.6320 (>1000.0)  1,102,284.5868 (>1000.0)   93,018.0090 (>1000.0)  1,098,367.9940 (>1000.0)  114,417.6415 (>1000.0)       2;0        0.9072 (0.00)          5           1
+test_double_reaction_deletion_benchmark                   1,842,523.9490 (>1000.0)  2,132,045.9760 (>1000.0)  2,007,250.6842 (>1000.0)  117,969.0563 (>1000.0)  2,023,457.3520 (>1000.0)  190,557.0063 (>1000.0)       2;0        0.4982 (0.00)          5           1
+test_flux_variability_benchmark[glpk]                     3,605,652.2910 (>1000.0)  3,826,309.7040 (>1000.0)  3,773,381.7958 (>1000.0)   94,413.8990 (>1000.0)  3,813,550.8610 (>1000.0)   74,221.6110 (>1000.0)       1;1        0.2650 (0.00)          5           1
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
 Legend:
   Outliers: 1 Standard Deviation from Mean; 1.5 IQR (InterQuartile Range) from 1st Quartile and 3rd Quartile.
   OPS: Operations Per Second, computed as 1 / Mean
-==== 511 passed, 27 skipped, 11 xfailed, 170 warnings in 367.61s (0:06:07) =====
+==== 511 passed, 27 skipped, 11 xfailed, 242 warnings in 216.22s (0:03:36) =====
    create-stamp debian/debhelper-build-stamp
    dh_testroot -O--buildsystem=pybuild
    dh_prep -O--buildsystem=pybuild
@@ -1719,238 +1762,238 @@
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/.benchmarks
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/validate.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/modify.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/annotate.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/delete.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/validate.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/modify.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/annotate.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/delete.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/annotations.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/boundary_types.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/minimal_medium.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/annotations.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/minimal_medium.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/salmonella.xml.gz -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.json -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.yml -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/iJO1366.xml.gz -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini_cobra.xml -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/textbook.xml.gz -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.mat -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/model_summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/reaction_summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/metabolite_summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/metabolite_summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/reaction_summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/model_summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/validate.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/util.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/process_pool.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/context.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/solver.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/context.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/process_pool.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/util.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/array.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/solver.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/array.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/exceptions.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/achr.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/sampling.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/core.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/optgp.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/optgp.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/achr.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/core.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/sampling.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/__pycache__/exceptions.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/metabolite.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/dictlist.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/solution.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/singleton.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/object.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/dictlist.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/formula.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/species.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/group.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/metabolite.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/singleton.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/configuration.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/metabolite.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/model.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/solution.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/formula.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/gene.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/group.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/dictlist.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/configuration.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/reaction.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/gene.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/object.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/metabolite.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/solution.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/model.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/species.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/group.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/singleton.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/object.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/reaction.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/dictlist.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/formula.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/formula.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/model.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/species.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/group.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/reaction.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/salmonella.xml.gz -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.yml -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/textbook.xml.gz -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.json -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.mat -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini_cobra.xml -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/data/iJO1366.xml.gz -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/schema_v1.json -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/cobrapy_repository.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/bigg_models_repository.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/load.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/abstract_model_repository.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/cobrapy_repository.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/cobrapy_repository.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/abstract_model_repository.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/load.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/bigg_models_repository.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/load.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/cobrapy_repository.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/load.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/mat.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/yaml.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/json.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/yaml.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/yaml.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/json.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/sbml.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/dict.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/mat.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/json.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/sbml.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/dict.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/schema_v1.json -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/yaml.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/io/sbml.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/__pycache__/exceptions.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/reaction_summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/model_summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/metabolite_summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/summary.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/metabolite_summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/model_summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/reaction_summary.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/annotations.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/boundary_types.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/annotations.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/minimal_medium.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/medium/minimal_medium.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/room.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/moma.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/fastcc.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/variability.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/moma.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/deletion.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/helpers.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/geometric.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
 creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/reaction.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/deletion.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/reaction.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/phenotype_phase_plane.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/variability.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/geometric.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/parsimonious.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/reaction.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
 copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/gapfilling.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/process_pool.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/solver.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/process_pool.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/util.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/array.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/context.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/solver.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/array.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/context.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
-copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/util/util.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
-creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/.benchmarks
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/validate.py to validate.cpython-311.pyc
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/room.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/geometric.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/reaction.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/achr.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/optgp.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/core.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
+creating /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/__init__.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/achr.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/core.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/optgp.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/sampling.cpython-311.pyc -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/sampling.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
+copying /build/python-cobra-0.26.2/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__init__.py -> /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/modify.py to modify.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__init__.py to __init__.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/annotate.py to annotate.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/delete.py to delete.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/annotations.py to annotations.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/boundary_types.py to boundary_types.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/summary.py to summary.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/model_summary.py to model_summary.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/reaction_summary.py to reaction_summary.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/metabolite_summary.py to metabolite_summary.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__init__.py to __init__.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__init__.py to __init__.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/validate.py to validate.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/util.py to util.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/process_pool.py to process_pool.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/context.py to context.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/solver.py to solver.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/array.py to array.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__init__.py to __init__.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/exceptions.py to exceptions.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/achr.py to achr.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/sampling.py to sampling.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/core.py to core.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/optgp.py to optgp.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/metabolite.py to metabolite.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/dictlist.py to dictlist.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/solution.py to solution.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/singleton.py to singleton.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/object.py to object.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/dictlist.py to dictlist.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/metabolite.py to metabolite.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/singleton.py to singleton.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/configuration.py to configuration.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/formula.py to formula.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/model.py to model.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/species.py to species.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/group.py to group.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/configuration.py to configuration.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/reaction.py to reaction.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/model.py to model.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/gene.py to gene.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/cobrapy_repository.py to cobrapy_repository.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__init__.py to __init__.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/bigg_models_repository.py to bigg_models_repository.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/load.py to load.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/abstract_model_repository.py to abstract_model_repository.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__init__.py to __init__.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/cobrapy_repository.py to cobrapy_repository.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/load.py to load.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/mat.py to mat.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/yaml.py to yaml.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/json.py to json.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/dict.py to dict.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/yaml.py to yaml.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__init__.py to __init__.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/sbml.py to sbml.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/loopless.py to loopless.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/room.py to room.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/summary.py to summary.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/metabolite_summary.py to metabolite_summary.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/model_summary.py to model_summary.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/reaction_summary.py to reaction_summary.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__init__.py to __init__.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/annotations.py to annotations.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/boundary_types.py to boundary_types.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__init__.py to __init__.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/fastcc.py to fastcc.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/variability.py to variability.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/deletion.py to deletion.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/helpers.py to helpers.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/room.py to room.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__init__.py to __init__.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/geometric.py to geometric.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/loopless.py to loopless.cpython-311.pyc
 byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/reaction.py to reaction.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/process_pool.py to process_pool.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__init__.py to __init__.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/solver.py to solver.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/array.py to array.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/context.py to context.cpython-311.pyc
-byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/util.py to util.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__init__.py to __init__.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/achr.py to achr.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/optgp.py to optgp.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/core.py to core.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/sampling.py to sampling.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-311.pyc
+byte-compiling /build/python-cobra-0.26.2/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__init__.py to __init__.cpython-311.pyc
 running install_egg_info
 running egg_info
 creating src/cobra.egg-info
@@ -1967,11 +2010,11 @@
 Skipping SOURCES.txt
 running install_scripts
    debian/rules override_dh_install
-make[1]: Entering directory '/build/python-cobra-0.26.2'
+make[1]: Verzeichnis „/build/python-cobra-0.26.2“ wird betreten
 dh_install -X update_pickles.py --package=python-cobra-data
 dh_install --remaining-packages
 find debian -name __pycache__ | xargs rm -rf
-make[1]: Leaving directory '/build/python-cobra-0.26.2'
+make[1]: Verzeichnis „/build/python-cobra-0.26.2“ wird verlassen
    dh_installdocs -O--buildsystem=pybuild
    dh_installchangelogs -O--buildsystem=pybuild
    dh_python3 -O--buildsystem=pybuild
@@ -1993,8 +2036,8 @@
 dpkg-gencontrol: warning: Depends field of package python3-cobra: substitution variable ${shlibs:Depends} used, but is not defined
    dh_md5sums -O--buildsystem=pybuild
    dh_builddeb -O--buildsystem=pybuild
-dpkg-deb: building package 'python3-cobra' in '../python3-cobra_0.26.2-1_i386.deb'.
-dpkg-deb: building package 'python-cobra-data' in '../python-cobra-data_0.26.2-1_all.deb'.
+dpkg-deb: Paket »python-cobra-data« wird in »../python-cobra-data_0.26.2-1_all.deb« gebaut.
+dpkg-deb: Paket »python3-cobra« wird in »../python3-cobra_0.26.2-1_i386.deb« gebaut.
  dpkg-genbuildinfo --build=binary -O../python-cobra_0.26.2-1_i386.buildinfo
  dpkg-genchanges --build=binary -O../python-cobra_0.26.2-1_i386.changes
 dpkg-genchanges: info: binary-only upload (no source code included)
@@ -2002,12 +2045,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: including full source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/35971/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/1826 and its subdirectories
-I: Current time: Fri Jun  9 13:05:54 -12 2023
-I: pbuilder-time-stamp: 1686359154
+I: removing directory /srv/workspace/pbuilder/35971 and its subdirectories
+I: Current time: Fri Jul 12 21:34:05 +14 2024
+I: pbuilder-time-stamp: 1720769645