Diff of the two buildlogs: -- --- b1/build.log 2021-12-30 22:37:04.280937171 +0000 +++ b2/build.log 2021-12-30 23:14:27.566818225 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 30 09:46:32 -12 2021 -I: pbuilder-time-stamp: 1640900792 +I: Current time: Thu Feb 2 19:00:08 +14 2023 +I: pbuilder-time-stamp: 1675314008 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./openbabel_3.1.1+dfsg-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.mSrUcAbj/trustedkeys.kbx': General error -gpgv: Signature made Thu Jun 10 01:23:29 2021 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.V5w7MX3o/trustedkeys.kbx': General error +gpgv: Signature made Fri Jun 11 03:23:29 2021 +14 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key @@ -35,135 +35,169 @@ dpkg-source: info: applying 650b1f829ac47cc84877a330366ec9485da3ec99.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/837310/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1714546/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1714546/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1714546/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='d40e388830f84f13b86a40d47329be74' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='837310' - PS1='# ' - PS2='> ' + INVOCATION_ID=6e40db8d2ae14367a7b24ce4fa2aee82 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1714546 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.Eu4fMenQQY/pbuilderrc_EjPa --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.Eu4fMenQQY/b1 --logfile b1/build.log openbabel_3.1.1+dfsg-6.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.Eu4fMenQQY/pbuilderrc_dS6O --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.Eu4fMenQQY/b2 --logfile b2/build.log openbabel_3.1.1+dfsg-6.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos1-amd64 5.10.0-10-amd64 #1 SMP Debian 5.10.84-1 (2021-12-08) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Aug 4 08:25 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Jul 28 07:09 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 69032 Jul 28 07:09 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe - -rwxr-xr-x 1 root root 98048 Mar 2 2021 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Jul 28 07:09 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Jul 28 07:09 more - -rwsr-xr-x 1 root root 55528 Jul 28 07:09 mount - -rwxr-xr-x 1 root root 18664 Jul 28 07:09 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Dec 20 21:25 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Jul 28 07:09 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Jul 28 07:09 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Jul 28 07:09 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless - -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew -I: user script /srv/workspace/pbuilder/837310/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Aug 5 2021 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Jul 29 2021 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 69032 Jul 29 2021 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe + -rwxr-xr-x 1 root root 98048 Mar 3 2021 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Jul 29 2021 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Jul 29 2021 more + -rwsr-xr-x 1 root root 55528 Jul 29 2021 mount + -rwxr-xr-x 1 root root 18664 Jul 29 2021 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Aug 5 2021 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Feb 2 19:00 sh -> bash + lrwxrwxrwx 1 root root 4 Jan 24 05:47 sh.distrib -> dash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Jul 29 2021 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Jul 29 2021 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Jul 29 2021 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless + -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew +I: user script /srv/workspace/pbuilder/1714546/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -722,7 +756,7 @@ Get: 473 http://deb.debian.org/debian bullseye/main amd64 texlive-latex-recommended all 2020.20210202-3 [14.5 MB] Get: 474 http://deb.debian.org/debian bullseye/main amd64 texlive-pictures all 2020.20210202-3 [6743 kB] Get: 475 http://deb.debian.org/debian bullseye/main amd64 texlive-latex-extra all 2020.20210202-3 [13.7 MB] -Fetched 318 MB in 11s (29.5 MB/s) +Fetched 318 MB in 4s (75.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) @@ -2676,7 +2710,8 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/openbabel-3.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openbabel_3.1.1+dfsg-6_source.changes +hostname: Name or service not known +I: Running cd /build/openbabel-3.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../openbabel_3.1.1+dfsg-6_source.changes dpkg-buildpackage: info: source package openbabel dpkg-buildpackage: info: source version 3.1.1+dfsg-6 dpkg-buildpackage: info: source distribution unstable @@ -2832,7 +2867,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/openbabel-3.1.1+dfsg' dh_auto_build - cd builddir && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 + cd builddir && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' /usr/bin/cmake -S/build/openbabel-3.1.1+dfsg -B/build/openbabel-3.1.1+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/openbabel-3.1.1+dfsg/builddir/CMakeFiles /build/openbabel-3.1.1+dfsg/builddir//CMakeFiles/progress.marks @@ -2848,27 +2883,27 @@ make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/alias.cpp.o -c /build/openbabel-3.1.1+dfsg/src/alias.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/atom.cpp.o -c /build/openbabel-3.1.1+dfsg/src/atom.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/base.cpp.o -[ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/alias.cpp.o -c /build/openbabel-3.1.1+dfsg/src/alias.cpp -[ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/atom.cpp.o -c /build/openbabel-3.1.1+dfsg/src/atom.cpp cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/base.cpp.o -c /build/openbabel-3.1.1+dfsg/src/base.cpp cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/bitvec.cpp.o -c /build/openbabel-3.1.1+dfsg/src/bitvec.cpp +[ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/bond.cpp.o -c /build/openbabel-3.1.1+dfsg/src/bond.cpp -[ 2%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o +[ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/bondtyper.cpp.o -c /build/openbabel-3.1.1+dfsg/src/bondtyper.cpp +[ 2%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/builder.cpp.o -c /build/openbabel-3.1.1+dfsg/src/builder.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/canon.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/canon.cpp.o -c /build/openbabel-3.1.1+dfsg/src/canon.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/chains.cpp.o +[ 2%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/chains.cpp.o -c /build/openbabel-3.1.1+dfsg/src/chains.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/data.cpp.o -[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/data_utilities.cpp.o -[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/chargemodel.cpp.o -c /build/openbabel-3.1.1+dfsg/src/chargemodel.cpp +[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/data_utilities.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/data.cpp.o -c /build/openbabel-3.1.1+dfsg/src/data.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/data_utilities.cpp.o -c /build/openbabel-3.1.1+dfsg/src/data_utilities.cpp @@ -2907,10 +2942,10 @@ cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/obconversion.cpp.o -c /build/openbabel-3.1.1+dfsg/src/obconversion.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/oberror.cpp.o -c /build/openbabel-3.1.1+dfsg/src/oberror.cpp -[ 6%] Building CXX object src/CMakeFiles/openbabel.dir/obfunctions.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/obfunctions.cpp.o -c /build/openbabel-3.1.1+dfsg/src/obfunctions.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/obiter.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/obiter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/obiter.cpp +[ 7%] Building CXX object src/CMakeFiles/openbabel.dir/obfunctions.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/obfunctions.cpp.o -c /build/openbabel-3.1.1+dfsg/src/obfunctions.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/obutil.cpp.o -c /build/openbabel-3.1.1+dfsg/src/obutil.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/op.cpp.o @@ -2957,10 +2992,10 @@ cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/confsearch.cpp.o -c /build/openbabel-3.1.1+dfsg/src/confsearch.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/distgeom.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/distgeom.cpp.o -c /build/openbabel-3.1.1+dfsg/src/distgeom.cpp -[ 11%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -c /build/openbabel-3.1.1+dfsg/src/dlhandler_unix.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/depict/depict.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/depict.cpp +[ 11%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -c /build/openbabel-3.1.1+dfsg/src/dlhandler_unix.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/svgpainter.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o @@ -3032,241 +3067,239 @@ make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend -make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend -make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend +make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/depend.internal". -Scanning dependencies of target plugin_fingerprints make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/depend.internal". +make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend +make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend +make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/depend.internal". -make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build -make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/depend.internal". -Scanning dependencies of target balstformat -make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= -Scanning dependencies of target cacaoformat -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/depend.internal". -Scanning dependencies of target mdffformat -make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/depend.internal". +Scanning dependencies of target acrformat +Scanning dependencies of target cacaoformat +Scanning dependencies of target plugin_fingerprints +Scanning dependencies of target molproformat +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/depend.internal". -Scanning dependencies of target molproformat -Scanning dependencies of target plugin_descriptors -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/depend.internal". +Scanning dependencies of target xsfformat +Scanning dependencies of target zindoformat +Scanning dependencies of target mdffformat make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build +Scanning dependencies of target plugin_forcefields +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build +Scanning dependencies of target gausscubeformat make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build -Scanning dependencies of target orcaformat -Scanning dependencies of target MCDLformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/depend.internal". +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build +make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build +Scanning dependencies of target MCDLformat make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build +make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +Scanning dependencies of target plugin_descriptors make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/depend.internal". -make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build -[ 15%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". +Scanning dependencies of target balstformat +make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 15%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/depend.internal". -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacaoformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cacaoformat.cpp -Scanning dependencies of target acrformat -Scanning dependencies of target zindoformat -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -c /build/openbabel-3.1.1+dfsg/src/fingerprints/finger2.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/depend.internal". make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build -[ 15%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdffformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mdffformat.dir/mdffformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mdffformat.cpp -Scanning dependencies of target xsfformat -Scanning dependencies of target gausscubeformat -[ 16%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o +make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +Scanning dependencies of target qchemformat +Scanning dependencies of target orcaformat +[ 15%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 15%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/cansmidescriptor.cpp -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build -[ 16%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -c /build/openbabel-3.1.1+dfsg/src/fingerprints/finger2.cpp +[ 15%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacaoformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cacaoformat.cpp +[ 15%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbalstformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/balstformat.dir/balstformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/balstformat.cpp -[ 16%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o -[ 16%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/MCDLformat.cpp +make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build +[ 15%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdffformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mdffformat.dir/mdffformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mdffformat.cpp +[ 15%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefieldgaff.cpp make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolproformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/molproformat.dir/molproformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/molproformat.cpp -[ 16%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o -Scanning dependencies of target plugin_charges -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dorcaformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/orcaformat.dir/orcaformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/orcaformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build +make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacrformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/acrformat.dir/acrformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/acrformat.cpp +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolproformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/molproformat.dir/molproformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/molproformat.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 15%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o +[ 16%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o [ 16%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.cpp.o -Scanning dependencies of target plugin_forcefields -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dzindoformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/zindoformat.dir/zindoformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/zindoformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 16%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxsfformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xsfformat.dir/xsfformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xsfformat.cpp +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/cansmidescriptor.cpp +[ 16%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dzindoformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/zindoformat.dir/zindoformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/zindoformat.cpp +[ 16%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o +[ 16%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbalstformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/balstformat.dir/balstformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/balstformat.cpp +[ 16%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dorcaformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/orcaformat.dir/orcaformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/orcaformat.cpp [ 16%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -[ 16%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gausscubeformat.cpp -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacrformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/acrformat.dir/acrformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/acrformat.cpp +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/MCDLformat.cpp +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dqchemformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/qchemformat.dir/qchemformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/qchemformat.cpp Scanning dependencies of target plugin_ops +Scanning dependencies of target plugin_charges +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gausscubeformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/eem.cpp -[ 16%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefieldgaff.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/eem.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/addfilename.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/cmpdfilter.cpp -[ 16%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o +[ 17%] Linking CXX shared module ../../lib/x86_64-linux-gnu/acrformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/acrformat.so CMakeFiles/acrformat.dir/acrformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/addinindex.cpp -[ 16%] Linking CXX shared module ../../lib/x86_64-linux-gnu/balstformat.so +[ 17%] Linking CXX shared module ../../lib/x86_64-linux-gnu/balstformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/balstformat.so CMakeFiles/balstformat.dir/balstformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 17%] Linking CXX shared module ../../lib/x86_64-linux-gnu/zindoformat.so +[ 18%] Linking CXX shared module ../../lib/x86_64-linux-gnu/zindoformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 17%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/groupcontrib.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 18%] Linking CXX shared module ../../lib/x86_64-linux-gnu/acrformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 -[ 18%] Built target balstformat -make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/acrformat.so CMakeFiles/acrformat.dir/acrformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/depend.internal". -Scanning dependencies of target qchemformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 18%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dqchemformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/qchemformat.dir/qchemformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/qchemformat.cpp -[ 19%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cacaoformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 19%] Built target zindoformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 18%] Built target acrformat make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend -[ 19%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -c /build/openbabel-3.1.1+dfsg/src/fingerprints/finger3.cpp -[ 19%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xsfformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/depend.internal". Scanning dependencies of target crkformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 19%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o -[ 19%] Built target acrformat +[ 18%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrkformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/crkformat.dir/crkformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/crkformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 18%] Built target balstformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= +[ 18%] Built target zindoformat +make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/depend.internal". Scanning dependencies of target mmodformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 19%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmodformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mmodformat.dir/mmodformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mmodformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 19%] Built target xsfformat -make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/depend.internal". +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' Scanning dependencies of target amberformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 20%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.cpp.o +[ 18%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmodformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mmodformat.dir/mmodformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mmodformat.cpp +[ 19%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Damberformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/amberformat.dir/amberformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/amberformat.cpp +[ 20%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cacaoformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 20%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -c /build/openbabel-3.1.1+dfsg/src/fingerprints/finger3.cpp +[ 20%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/groupcontrib.cpp +[ 20%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xsfformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 20%] Built target cacaoformat make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend @@ -3277,20 +3310,13 @@ Scanning dependencies of target titleformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build +[ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/addpolarh.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 20%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtitleformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/titleformat.dir/titleformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/titleformat.cpp -[ 20%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/gasteiger.cpp -[ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/addpolarh.cpp -[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/molproformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/molproformat.so CMakeFiles/molproformat.dir/molproformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 21%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/none.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/none.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 21%] Built target molproformat +[ 20%] Built target xsfformat make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= @@ -3300,19 +3326,18 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/amberformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 -[ 21%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/amberformat.so CMakeFiles/amberformat.dir/amberformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 20%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacesformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/acesformat.dir/acesformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/acesformat.cpp +[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/molproformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/molproformat.so CMakeFiles/molproformat.dir/molproformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 21%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/gasteiger.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/crkformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 -[ 21%] Built target amberformat +[ 21%] Built target molproformat make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/crkformat.so CMakeFiles/crkformat.dir/crkformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/depend.internal". Scanning dependencies of target CSRformat @@ -3321,46 +3346,47 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 21%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DCSRformat_EXPORTS -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/CSRformat.dir/CSRformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/CSRformat.cpp -[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/titleformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/titleformat.so CMakeFiles/titleformat.dir/titleformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/amberformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/amberformat.so CMakeFiles/amberformat.dir/amberformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/addnonpolarh.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 21%] Built target crkformat +[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/qchemformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 +[ 21%] Built target amberformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/qchemformat.so CMakeFiles/qchemformat.dir/qchemformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/titleformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/depend.internal". Scanning dependencies of target moldenformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/titleformat.so CMakeFiles/titleformat.dir/titleformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 21%] Built target titleformat +[ 21%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmoldenformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/moldenformat.dir/moldenformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/moldenformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 21%] Built target qchemformat make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= -[ 21%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmoldenformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/moldenformat.dir/moldenformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/moldenformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/depend.internal". Scanning dependencies of target bgfformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 21%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/none.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/none.cpp [ 21%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbgfformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bgfformat.dir/bgfformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/bgfformat.cpp -[ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/addnonpolarh.cpp -[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mmodformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 21%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/mmff94.cpp -[ 21%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/filters.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 21%] Built target mmodformat +[ 21%] Built target titleformat make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= @@ -3370,6 +3396,11 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 21%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmopacformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mopacformat.dir/mopacformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mopacformat.cpp +[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/crkformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/crkformat.so CMakeFiles/crkformat.dir/crkformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 In file included from /usr/include/string.h:495, from /usr/include/c++/10/cstring:42, from /build/openbabel-3.1.1+dfsg/include/openbabel/plugin.h:29, @@ -3386,15 +3417,10 @@ /build/openbabel-3.1.1+dfsg/src/formats/CSRformat.cpp:192:12: note: length computed here 192 | strncpy(output, input, strlen(input)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 21%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmopacformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mopacformat.dir/mopacformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mopacformat.cpp -[ 21%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -c /build/openbabel-3.1.1+dfsg/src/fingerprints/fingerecfp.cpp -[ 21%] Linking CXX shared module ../../lib/x86_64-linux-gnu/CSRformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 21%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/filters.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 21%] Built target CSRformat +[ 21%] Built target crkformat make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= @@ -3406,16 +3432,16 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 22%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxyzformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xyzformat.dir/xyzformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xyzformat.cpp -[ 22%] Linking CXX shared module ../../lib/x86_64-linux-gnu/orcaformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 22%] Linking CXX shared module ../../lib/x86_64-linux-gnu/qchemformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 +[ 22%] Linking CXX shared module ../../lib/x86_64-linux-gnu/CSRformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 23%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/canonical.cpp -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/qchemformat.so CMakeFiles/qchemformat.dir/qchemformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 24%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gausscubeformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 23%] Built target orcaformat +[ 24%] Built target CSRformat make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= @@ -3425,87 +3451,82 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 23%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o +[ 24%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Djaguarformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/jaguarformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 23%] Built target qchemformat +[ 24%] Built target gausscubeformat make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= -[ 24%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gausscubeformat.so +[ 24%] Linking CXX shared module ../../lib/x86_64-linux-gnu/orcaformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/depend.internal". -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 Scanning dependencies of target mol2format make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 25%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmol2format_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mol2format.dir/mol2format.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mol2format.cpp +[ 25%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mdffformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 25%] Built target gausscubeformat +[ 25%] Built target orcaformat make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend -[ 25%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mdffformat.so make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 +[ 25%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/mmff94.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/depend.internal". -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Scanning dependencies of target hinformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 25%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dhinformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/hinformat.dir/hinformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/hinformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 25%] Built target mdffformat +[ 25%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mmodformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/inchidescriptor.cpp -[ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/smartsdescriptors.cpp -[ 27%] Linking CXX shared module ../../lib/x86_64-linux-gnu/bgfformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 -[ 27%] Linking CXX shared module ../../lib/x86_64-linux-gnu/acesformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/acesformat.so CMakeFiles/acesformat.dir/acesformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 28%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/fromfile.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 28%] Built target acesformat +[ 25%] Built target mdffformat make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= -[ 28%] Built target bgfformat -make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/depend.internal". Scanning dependencies of target gausszmatformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 25%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gausszmatformat.cpp +[ 25%] Built target mmodformat +make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/depend.internal". Scanning dependencies of target rxnformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 28%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gausszmatformat.cpp -[ 28%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o +[ 25%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drxnformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/rxnformat.dir/rxnformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/rxnformat.cpp -[ 29%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_fingerprints.so -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 25%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -c /build/openbabel-3.1.1+dfsg/src/fingerprints/fingerecfp.cpp +[ 26%] Linking CXX shared module ../../lib/x86_64-linux-gnu/bgfformat.so +[ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/changecell.cpp -[ 29%] Built target plugin_fingerprints +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 26%] Built target bgfformat make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= @@ -3515,24 +3536,16 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 29%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o +[ 26%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpwscfformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pwscfformat.cpp -[ 29%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefieldghemical.cpp -[ 29%] Linking CXX shared module ../../lib/x86_64-linux-gnu/hinformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/hinformat.so CMakeFiles/hinformat.dir/hinformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 29%] Linking CXX shared module ../../lib/x86_64-linux-gnu/moldenformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 29%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_descriptors.so -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 -[ 29%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xyzformat.so +[ 26%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xyzformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 26%] Linking CXX shared module ../../lib/x86_64-linux-gnu/acesformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/acesformat.so CMakeFiles/acesformat.dir/acesformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 29%] Built target hinformat +[ 26%] Built target xyzformat make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cofformat.dir/DependInfo.cmake --color= @@ -3542,41 +3555,72 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 29%] Building CXX object src/formats/CMakeFiles/cofformat.dir/cofformat.cpp.o +[ 26%] Building CXX object src/formats/CMakeFiles/cofformat.dir/cofformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcofformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cofformat.dir/cofformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cofformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 29%] Built target plugin_descriptors +[ 26%] Built target acesformat make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= -[ 29%] Built target moldenformat -make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/depend.internal". Scanning dependencies of target gulpformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 26%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgulpformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gulpformat.dir/gulpformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gulpformat.cpp +[ 27%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/fromfile.cpp +[ 27%] Linking CXX shared module ../../lib/x86_64-linux-gnu/hinformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/hinformat.so CMakeFiles/hinformat.dir/hinformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 28%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -c /build/openbabel-3.1.1+dfsg/src/descriptors/smartsdescriptors.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 28%] Built target hinformat +make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend +[ 28%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefieldghemical.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/depend.internal". -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' Scanning dependencies of target posformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build -[ 29%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgulpformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gulpformat.dir/gulpformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gulpformat.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 29%] Built target xyzformat +[ 29%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dposformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/posformat.dir/posformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/posformat.cpp +[ 29%] Linking CXX shared module ../../lib/x86_64-linux-gnu/moldenformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 30%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_fingerprints.so +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 31%] Linking CXX shared module ../../lib/x86_64-linux-gnu/jaguarformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 31%] Built target moldenformat make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= -[ 30%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dposformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/posformat.dir/posformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/posformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/depend.internal". +Scanning dependencies of target reportformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 32%] Building CXX object src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dreportformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/reportformat.dir/reportformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/reportformat.cpp +[ 32%] Built target plugin_fingerprints +make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/depend.internal". /build/openbabel-3.1.1+dfsg/src/formats/mol2format.cpp: In member function 'virtual bool OpenBabel::MOL2Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-3.1.1+dfsg/src/formats/mol2format.cpp:720:40: warning: '%-6s' directive output may be truncated writing between 6 and 32767 bytes into a region of size between 32756 and 32760 [-Wformat-truncation=] 720 | snprintf(buffer,BUFF_SIZE,"%7d %-6s %9.4f %9.4f %9.4f %-5s %3s %-8s %9.4f", @@ -3601,42 +3645,16 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -Scanning dependencies of target reportformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 31%] Building CXX object src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dreportformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/reportformat.dir/reportformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/reportformat.cpp -[ 31%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefieldmmff94.cpp -[ 32%] Linking CXX shared module ../../lib/x86_64-linux-gnu/jaguarformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 32%] Built target jaguarformat -make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/depend.internal". +[ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/delpolarh.cpp Scanning dependencies of target confabreport make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 32%] Building CXX object src/formats/CMakeFiles/confabreport.dir/confabreport.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dconfabreport_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/confabreport.dir/confabreport.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/confabreport.cpp -[ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/delpolarh.cpp -[ 32%] Linking CXX shared module ../../lib/x86_64-linux-gnu/rxnformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 32%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/eqeq.cpp -[ 32%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mol2format.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mol2format.so CMakeFiles/mol2format.dir/mol2format.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 32%] Built target rxnformat +[ 32%] Built target jaguarformat make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= @@ -3648,212 +3666,212 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 32%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchem3dformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/chem3dformat.cpp +[ 32%] Linking CXX shared module ../../lib/x86_64-linux-gnu/rxnformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 32%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gausszmatformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 32%] Built target mol2format -[ 32%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pwscfformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwscfformat.dir/link.txt --verbose=1 +[ 32%] Built target rxnformat make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 32%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gausszmatformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/depend.internal". Scanning dependencies of target castepformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 33%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcastepformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/castepformat.dir/castepformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/castepformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 33%] Built target pwscfformat +[ 33%] Built target gausszmatformat make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/depend.internal". -[ 33%] Built target gausszmatformat -make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= Scanning dependencies of target adfformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/depend.internal". -Scanning dependencies of target outformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 33%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dadfformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/adfformat.dir/adfformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/adfformat.cpp -[ 34%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Doutformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/outformat.dir/outformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/outformat.cpp -[ 34%] Linking CXX shared module ../../lib/x86_64-linux-gnu/reportformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/reportformat.so CMakeFiles/reportformat.dir/reportformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 34%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mopacformat.so +[ 33%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_descriptors.so +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 33%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pwscfformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwscfformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 33%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mopacformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/delnonpolarh.cpp -[ 34%] Built target reportformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 33%] Built target plugin_descriptors +make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= +[ 33%] Built target pwscfformat make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/depend.internal". make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= +Scanning dependencies of target outformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/depend.internal". Scanning dependencies of target nulformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build +[ 34%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Doutformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/outformat.dir/outformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/outformat.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 34%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnulformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/nulformat.dir/nulformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/nulformat.cpp -[ 35%] Linking CXX shared module ../../lib/x86_64-linux-gnu/MCDLformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 35%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gulpformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 -[ 35%] Built target mopacformat +[ 34%] Built target mopacformat make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= -[ 35%] Linking CXX shared module ../../lib/x86_64-linux-gnu/posformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 +[ 34%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnulformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/nulformat.dir/nulformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/nulformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/depend.internal". Scanning dependencies of target textformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/posformat.so CMakeFiles/posformat.dir/posformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 35%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.cpp.o +[ 34%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtextformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/textformat.dir/textformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/textformat.cpp +[ 34%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gulpformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/delnonpolarh.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 35%] Built target MCDLformat +[ 34%] Built target gulpformat make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/depend.internal". +[ 35%] Linking CXX shared module ../../lib/x86_64-linux-gnu/MCDLformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1 Scanning dependencies of target pqrformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 35%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpqrformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pqrformat.dir/pqrformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pqrformat.cpp +[ 35%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/eqeq.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 35%] Built target posformat +[ 35%] Built target MCDLformat +[ 35%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mol2format.so make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 35%] Built target gulpformat +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/depend.internal". -make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend Scanning dependencies of target stlformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mol2format.so CMakeFiles/mol2format.dir/mol2format.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". [ 35%] Building CXX object src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o -Scanning dependencies of target nwchemformat cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dstlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/stlformat.dir/stlformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/stlformat.cpp +[ 35%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cofformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cofformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cofformat.so CMakeFiles/cofformat.dir/cofformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 35%] Linking CXX shared module ../../lib/x86_64-linux-gnu/posformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/posformat.so CMakeFiles/posformat.dir/posformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 36%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnwchemformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/nwchemformat.cpp -[ 36%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chem3dformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 36%] Linking CXX shared module ../../lib/x86_64-linux-gnu/nulformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/nulformat.so CMakeFiles/nulformat.dir/nulformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 36%] Built target chem3dformat +[ 35%] Built target mol2format +make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend +[ 35%] Built target cofformat +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/depend.internal". +Scanning dependencies of target nwchemformat Scanning dependencies of target povrayformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 36%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnwchemformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/nwchemformat.cpp [ 36%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpovrayformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/povrayformat.dir/povrayformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/povrayformat.cpp -[ 36%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/gen2D.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 36%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cofformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cofformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cofformat.so CMakeFiles/cofformat.dir/cofformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 36%] Built target nulformat +[ 36%] Built target posformat make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= +[ 36%] Linking CXX shared module ../../lib/x86_64-linux-gnu/nulformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/depend.internal". Scanning dependencies of target inchiformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/nulformat.so CMakeFiles/nulformat.dir/nulformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 37%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/inchiformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/inchiformat.cpp +[ 37%] Linking CXX shared module ../../lib/x86_64-linux-gnu/reportformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/reportformat.so CMakeFiles/reportformat.dir/reportformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 37%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chem3dformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 38%] Linking CXX shared module ../../lib/x86_64-linux-gnu/confabreport.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/confabreport.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/confabreport.so CMakeFiles/confabreport.dir/confabreport.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 38%] Built target cofformat +[ 37%] Built target nulformat make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= +[ 37%] Linking CXX shared module ../../lib/x86_64-linux-gnu/textformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/depend.internal". Scanning dependencies of target aoforceformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 38%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/textformat.so CMakeFiles/textformat.dir/textformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 37%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Daoforceformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/aoforceformat.cpp -[ 38%] Linking CXX shared module ../../lib/x86_64-linux-gnu/castepformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/castepformat.so CMakeFiles/castepformat.dir/castepformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 38%] Linking CXX shared module ../../lib/x86_64-linux-gnu/outformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 -[ 38%] Built target confabreport +[ 37%] Built target reportformat make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/depend -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/outformat.so CMakeFiles/outformat.dir/outformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/depend.internal". -[ 38%] Linking CXX shared module ../../lib/x86_64-linux-gnu/textformat.so Scanning dependencies of target maeformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/build -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 38%] Built target castepformat +[ 37%] Built target chem3dformat make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/textformat.so CMakeFiles/textformat.dir/textformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 39%] Building CXX object src/formats/CMakeFiles/maeformat.dir/maeformat.cpp.o +[ 38%] Building CXX object src/formats/CMakeFiles/maeformat.dir/maeformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmaeformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/maeformat.dir/maeformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/maeformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/depend.internal". @@ -3861,10 +3879,10 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 39%] Building CXX object src/formats/CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o +[ 38%] Building CXX object src/formats/CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drinchiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/rinchiformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 39%] Built target outformat +[ 38%] Built target textformat make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= @@ -3874,26 +3892,58 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 39%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o +[ 38%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/gen2D.cpp +[ 38%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/MNAformat.dir/MNAformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/MNAformat.cpp -[ 39%] Built target textformat +[ 38%] Linking CXX shared module ../../lib/x86_64-linux-gnu/castepformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 +[ 38%] Linking CXX shared module ../../lib/x86_64-linux-gnu/outformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/castepformat.so CMakeFiles/castepformat.dir/castepformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/outformat.so CMakeFiles/outformat.dir/outformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 39%] Linking CXX shared module ../../lib/x86_64-linux-gnu/confabreport.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/confabreport.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/confabreport.so CMakeFiles/confabreport.dir/confabreport.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 39%] Built target castepformat make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/depend.internal". Scanning dependencies of target boxformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 39%] Built target outformat +make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= [ 39%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dboxformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/boxformat.dir/boxformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/boxformat.cpp -[ 40%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/fillUC.cpp -[ 40%] Linking CXX shared module ../../lib/x86_64-linux-gnu/stlformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/stlformat.so CMakeFiles/stlformat.dir/stlformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/depend.internal". +Scanning dependencies of target asciiformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 39%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/asciiformat.dir/asciiformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/asciiformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 39%] Built target confabreport +make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/depend.internal". +Scanning dependencies of target pngformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 39%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpngformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pngformat.dir/pngformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pngformat.cpp /build/openbabel-3.1.1+dfsg/src/formats/pqrformat.cpp: In member function 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-3.1.1+dfsg/src/formats/pqrformat.cpp:511:58: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 511 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); @@ -3937,40 +3987,11 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 39%] Linking CXX shared module ../../lib/x86_64-linux-gnu/stlformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/stlformat.so CMakeFiles/stlformat.dir/stlformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 40%] Built target stlformat -make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/depend.internal". -Scanning dependencies of target asciiformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 40%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/asciiformat.dir/asciiformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/asciiformat.cpp -[ 41%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pqrformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 41%] Built target pqrformat -make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/depend.internal". -Scanning dependencies of target pngformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 41%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpngformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pngformat.dir/pngformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pngformat.cpp -[ 41%] Linking CXX shared module ../../lib/x86_64-linux-gnu/aoforceformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 41%] Built target aoforceformat +[ 39%] Built target stlformat make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= @@ -3980,147 +4001,145 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 41%] Linking CXX shared module ../../lib/x86_64-linux-gnu/povrayformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 -[ 41%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o +[ 39%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mdlformat.dir/mdlformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 40%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/fillUC.cpp +[ 40%] Linking CXX shared module ../../lib/x86_64-linux-gnu/rinchiformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rinchiformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/rinchiformat.so CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 40%] Linking CXX shared module ../../lib/x86_64-linux-gnu/boxformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/boxformat.so CMakeFiles/boxformat.dir/boxformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 41%] Built target povrayformat +[ 40%] Linking CXX shared module ../../lib/x86_64-linux-gnu/adfformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/adfformat.so CMakeFiles/adfformat.dir/adfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 40%] Built target rinchiformat make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= +[ 40%] Built target boxformat +make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/depend.internal". +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= +[ 41%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/asciipainter.cpp Scanning dependencies of target PQSformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/depend.internal". +Scanning dependencies of target gamessformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 41%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DPQSformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/PQSformat.dir/PQSformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/PQSformat.cpp -[ 41%] Linking CXX shared module ../../lib/x86_64-linux-gnu/boxformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/boxformat.so CMakeFiles/boxformat.dir/boxformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 41%] Linking CXX shared module ../../lib/x86_64-linux-gnu/rinchiformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rinchiformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/rinchiformat.so CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 41%] Built target boxformat -make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend +[ 41%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pngformat.so +[ 42%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pqrformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1 +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 +[ 43%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gamessformat.dir/gamessformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gamessformat.cpp +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pngformat.so CMakeFiles/pngformat.dir/pngformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 41%] Built target rinchiformat +[ 43%] Built target adfformat make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/depend.internal". Scanning dependencies of target turbomoleformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 42%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dturbomoleformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/turbomoleformat.cpp -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/depend.internal". -Scanning dependencies of target gamessformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 43%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gamessformat.dir/gamessformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gamessformat.cpp -[ 43%] Linking CXX shared module ../../lib/x86_64-linux-gnu/MNAformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 43%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefielduff.cpp -[ 43%] Linking CXX shared module ../../lib/x86_64-linux-gnu/adfformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/adfformat.so CMakeFiles/adfformat.dir/adfformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 43%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/forcefield.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 43%] Built target MNAformat +[ 43%] Built target pqrformat make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= +[ 44%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dturbomoleformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/turbomoleformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/depend.internal". Scanning dependencies of target thermoformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 43%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o +[ 44%] Linking CXX shared module ../../lib/x86_64-linux-gnu/povrayformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 +[ 44%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dthermoformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/thermoformat.dir/thermoformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/thermoformat.cpp +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 44%] Linking CXX shared module ../../lib/x86_64-linux-gnu/MNAformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 43%] Built target adfformat +[ 44%] Built target pngformat make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend +[ 44%] Linking CXX shared module ../../lib/x86_64-linux-gnu/aoforceformat.so make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/depend.internal". Scanning dependencies of target svgformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 44%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o +[ 45%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsvgformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/svgformat.dir/svgformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/svgformat.cpp -[ 44%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pngformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pngformat.so CMakeFiles/pngformat.dir/pngformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 44%] Built target pngformat +[ 45%] Built target povrayformat make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= -[ 45%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/depend.internal". -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/asciipainter.cpp Scanning dependencies of target painterformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 45%] Built target MNAformat [ 45%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/painterformat.dir/painterformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/painterformat.cpp -[ 45%] Linking CXX shared module ../../lib/x86_64-linux-gnu/PQSformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 -[ 45%] Linking CXX shared module ../../lib/x86_64-linux-gnu/turbomoleformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 45%] Linking CXX shared module ../../lib/x86_64-linux-gnu/nwchemformat.so -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 45%] Built target PQSformat make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/painterformat.dir/painterformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/painterformat.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color= -[ 45%] Built target turbomoleformat -make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/depend.internal". -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= Scanning dependencies of target daltonformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 45%] Built target aoforceformat +[ 45%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddaltonformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/daltonformat.dir/daltonformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/daltonformat.cpp +make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/depend.internal". Scanning dependencies of target chemkinformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build -[ 45%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddaltonformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/daltonformat.dir/daltonformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/daltonformat.cpp [ 46%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemkinformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/chemkinformat.cpp +[ 46%] Linking CXX shared module ../../lib/x86_64-linux-gnu/asciiformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.cpp.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 46%] Built target nwchemformat +[ 46%] Built target asciiformat make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= @@ -4132,13 +4151,18 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 46%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xmlformat.cpp -[ 46%] Linking CXX shared module ../../lib/x86_64-linux-gnu/asciiformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.cpp.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 46%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/commandpainter.cpp +[ 46%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/forcefield.cpp +[ 46%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefieldmmff94.cpp +[ 46%] Linking CXX shared module ../../lib/x86_64-linux-gnu/PQSformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 +[ 46%] Linking CXX shared module ../../lib/x86_64-linux-gnu/turbomoleformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 46%] Built target asciiformat +[ 46%] Built target PQSformat make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= @@ -4150,15 +4174,10 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 47%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dabinitformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/abinitformat.dir/abinitformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/abinitformat.cpp -[ 47%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/gen3d.cpp -[ 47%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/getinchi.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/getinchi.cpp -[ 48%] Linking CXX shared module ../../lib/x86_64-linux-gnu/thermoformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 48%] Built target thermoformat +[ 47%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/commandpainter.cpp +[ 47%] Built target turbomoleformat make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= @@ -4168,38 +4187,20 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 48%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o -[ 48%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o +[ 47%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtinkerformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/tinkerformat.cpp +[ 47%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/getinchi.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/getinchi.cpp +[ 47%] Linking CXX shared module ../../lib/x86_64-linux-gnu/nwchemformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 47%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp -[ 48%] Linking CXX shared module ../../lib/x86_64-linux-gnu/painterformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/painterformat.so CMakeFiles/painterformat.dir/painterformat.cpp.o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 48%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/unique.cpp +[ 48%] Linking CXX shared module ../../lib/x86_64-linux-gnu/thermoformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 48%] Built target painterformat -/build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp: In member function 'std::string OpenBabel::MDLFormat::GetTimeDate()': -/build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=] - 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, - | ^~~~ -/build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp:1709:22: note: directive argument in the range [-2147483648, 2147483547] - 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, - | ^~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/stdio.h:867, - from /usr/include/c++/10/cstdio:42, - from /usr/include/c++/10/ext/string_conversions.h:43, - from /usr/include/c++/10/bits/basic_string.h:6545, - from /usr/include/c++/10/string:55, - from /usr/include/c++/10/bits/locale_classes.h:40, - from /usr/include/c++/10/bits/ios_base.h:41, - from /usr/include/c++/10/iomanip:40, - from /build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp:27: -/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 11 and 56 bytes into a destination of size 11 - 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 68 | __bos (__s), __fmt, __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 48%] Built target nwchemformat make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= @@ -4211,15 +4212,12 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 48%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/APIInterface.dir/APIInterface.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/APIInterface.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 48%] Linking CXX shared module ../../lib/x86_64-linux-gnu/svgformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/svgformat.so CMakeFiles/svgformat.dir/svgformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/daltonformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/daltonformat.so CMakeFiles/daltonformat.dir/daltonformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 49%] Built target svgformat +[ 48%] Built target thermoformat make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/svgformat.so CMakeFiles/svgformat.dir/svgformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/depend.internal". @@ -4227,14 +4225,19 @@ Scanning dependencies of target fchkformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build -[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/maeformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/maeformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/maeformat.so CMakeFiles/maeformat.dir/maeformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 49%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o +[ 48%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o +[ 48%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/unique.cpp cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfchkformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fchkformat.dir/fchkformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fchkformat.cpp +[ 48%] Linking CXX shared module ../../lib/x86_64-linux-gnu/painterformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/painterformat.so CMakeFiles/painterformat.dir/painterformat.cpp.o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/daltonformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/daltonformat.so CMakeFiles/daltonformat.dir/daltonformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 49%] Built target daltonformat +[ 49%] Built target painterformat make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= @@ -4243,30 +4246,24 @@ Scanning dependencies of target pubchem make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 49%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchem.dir/xml/pubchem.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/pubchem.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 49%] Built target maeformat +[ 49%] Built target svgformat make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= -[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/abinitformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/depend.internal". -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Scanning dependencies of target carformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 49%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcarformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/carformat.dir/carformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/carformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/APIInterface.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 49%] Built target abinitformat +[ 49%] Built target daltonformat make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= @@ -4278,6 +4275,32 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 49%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pdbformat.dir/pdbformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pdbformat.cpp +/build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp: In member function 'std::string OpenBabel::MDLFormat::GetTimeDate()': +/build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=] + 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, + | ^~~~ +/build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp:1709:22: note: directive argument in the range [-2147483648, 2147483547] + 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, + | ^~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/stdio.h:867, + from /usr/include/c++/10/cstdio:42, + from /usr/include/c++/10/ext/string_conversions.h:43, + from /usr/include/c++/10/bits/basic_string.h:6545, + from /usr/include/c++/10/string:55, + from /usr/include/c++/10/bits/locale_classes.h:40, + from /usr/include/c++/10/bits/ios_base.h:41, + from /usr/include/c++/10/iomanip:40, + from /build/openbabel-3.1.1+dfsg/src/formats/mdlformat.cpp:27: +/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 11 and 56 bytes into a destination of size 11 + 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 68 | __bos (__s), __fmt, __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 49%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/gen3d.cpp +[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/APIInterface.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 49%] Built target APIInterface make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend @@ -4291,61 +4314,61 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 49%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcccformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cccformat.dir/cccformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cccformat.cpp -[ 49%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/largest.cpp +[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/abinitformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 [ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/inchiformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/inchiformat.so CMakeFiles/inchiformat.dir/inchiformat.cpp.o CMakeFiles/inchiformat.dir/getinchi.cpp.o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 49%] Linking CXX shared module ../../lib/x86_64-linux-gnu/tinkerformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 50%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xmlformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xmlformat.so CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 50%] Built target tinkerformat +[ 50%] Built target abinitformat make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= +[ 50%] Linking CXX shared module ../../lib/x86_64-linux-gnu/tinkerformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/depend.internal". Scanning dependencies of target gamessukformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 50%] Built target inchiformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 50%] Built target xmlformat make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= [ 50%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o +[ 50%] Built target inchiformat cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessukformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gamessukformat.cpp +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal". Scanning dependencies of target pcmodelformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pcmodelformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target xmlformat -make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/depend.internal". Scanning dependencies of target copyformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 51%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pcmodelformat.cpp [ 51%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcopyformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/copyformat.dir/copyformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/copyformat.cpp -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/carformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/carformat.so CMakeFiles/carformat.dir/carformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 51%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchem.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target carformat +[ 51%] Built target tinkerformat make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= @@ -4357,13 +4380,11 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 51%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawct_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/chemdrawct.cpp -[ 51%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchem.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cccformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cccformat.so CMakeFiles/cccformat.dir/cccformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/maeformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/maeformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/maeformat.so CMakeFiles/maeformat.dir/maeformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target cccformat +[ 51%] Built target maeformat make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= @@ -4375,11 +4396,56 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 51%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemtoolformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/chemtoolformat.cpp -[ 51%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/qeq.cpp +[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cccformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cccformat.so CMakeFiles/cccformat.dir/cccformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 51%] Built target cccformat +make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= +[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/carformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/depend.internal". +Scanning dependencies of target fhiaimsformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/carformat.so CMakeFiles/carformat.dir/carformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 51%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhiaimsformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fhiaimsformat.cpp [ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/copyformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/copyformat.so CMakeFiles/copyformat.dir/copyformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 51%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/largest.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 51%] Built target carformat +make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/depend.internal". +[ 51%] Built target copyformat +make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend +Scanning dependencies of target cifformat +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/depend.internal". +[ 51%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o +Scanning dependencies of target gaussformat +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcifformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cifformat.dir/cifformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cifformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 51%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgaussformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gaussformat.dir/gaussformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gaussformat.cpp /build/openbabel-3.1.1+dfsg/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-3.1.1+dfsg/src/formats/pdbformat.cpp:684:58: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 684 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); @@ -4447,114 +4513,62 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gamessformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target copyformat -make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/depend.internal". -Scanning dependencies of target fhiaimsformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhiaimsformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fhiaimsformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target gamessformat -make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/depend.internal". -Scanning dependencies of target cifformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcifformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cifformat.dir/cifformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cifformat.cpp -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pcmodelformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 -[ 51%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/qtpie.cpp -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemdrawct.so -[ 51%] Built target pcmodelformat -make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/depend.internal". -Scanning dependencies of target gaussformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgaussformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gaussformat.dir/gaussformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gaussformat.cpp +[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pubchem.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.cpp.o CMakeFiles/pubchem.dir/xml/xml.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemtoolformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target chemdrawct +[ 51%] Built target pubchem make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/depend.internal". -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemtoolformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 Scanning dependencies of target dlpolyformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 51%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddlpolyformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/dlpolyformat.cpp -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pubchem.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.cpp.o CMakeFiles/pubchem.dir/xml/xml.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 51%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/loader.cpp +[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pcmodelformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemkinformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 +[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemdrawct.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 [ 51%] Built target chemtoolformat make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/depend.internal". Scanning dependencies of target smilesformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 51%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsmilesformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/smilesformat.dir/smilesformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/smilesformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target pubchem +[ 51%] Built target pcmodelformat make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/depend.internal". Scanning dependencies of target exyzformat -[ 51%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fchkformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 51%] Built target chemkinformat -make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend [ 52%] Building CXX object src/formats/CMakeFiles/exyzformat.dir/exyzformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dexyzformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/exyzformat.dir/exyzformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/exyzformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 52%] Built target chemdrawct +make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal". Scanning dependencies of target fastsearchformat @@ -4563,11 +4577,14 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 52%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fastsearchformat.cpp -[ 53%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_forcefields.so -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 52%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fchkformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 52%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fhiaimsformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 53%] Built target fchkformat +[ 52%] Built target fchkformat make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= @@ -4577,10 +4594,10 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 53%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o +[ 52%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastaformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fastaformat.dir/fastaformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fastaformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 53%] Built target plugin_forcefields +[ 52%] Built target fhiaimsformat make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= @@ -4590,45 +4607,47 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 53%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o +[ 52%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgromos96format_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gromos96format.dir/gromos96format.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/gromos96format.cpp -[ 54%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mdlformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 -[ 54%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fhiaimsformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 52%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/loader.cpp +[ 52%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gamessformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 52%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemkinformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 54%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pdbformat.so -[ 54%] Built target fhiaimsformat -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 +[ 52%] Built target gamessformat make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend -[ 54%] Built target mdlformat -make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/depend.internal". Scanning dependencies of target featformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 52%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfeatformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/featformat.dir/featformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/featformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 52%] Built target chemkinformat +make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/depend.internal". -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' Scanning dependencies of target fingerprintformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 54%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfeatformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/featformat.dir/featformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/featformat.cpp -[ 54%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o +[ 52%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfingerprintformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fingerprintformat.cpp +[ 52%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pdbformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 54%] Built target pdbformat +[ 52%] Built target pdbformat make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= @@ -4638,15 +4657,16 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 54%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.cpp.o +[ 52%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolreport_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/molreport.dir/molreport.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/molreport.cpp -[ 55%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gromos96format.so +[ 53%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mdlformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 54%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gromos96format.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 56%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/neutralize.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 56%] Built target gromos96format +[ 54%] Built target gromos96format make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= @@ -4656,13 +4676,10 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 57%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o +[ 55%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fhformat.dir/fhformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fhformat.cpp -[ 57%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fastaformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 57%] Built target fastaformat +[ 55%] Built target mdlformat make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdoodlejsonformat.dir/DependInfo.cmake --color= @@ -4672,16 +4689,15 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 57%] Building CXX object src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o +[ 55%] Building CXX object src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/json/chemdoodlejsonformat.cpp -[ 57%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gamessukformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 58%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fastsearchformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 55%] Linking CXX shared module ../../lib/x86_64-linux-gnu/featformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/featformat.so CMakeFiles/featformat.dir/featformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 56%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/neutralize.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 58%] Built target gamessukformat +[ 56%] Built target featformat make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= @@ -4690,97 +4706,98 @@ Scanning dependencies of target cacheformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build -[ 58%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fhformat.so make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 -[ 58%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o +[ 56%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacheformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cacheformat.dir/cacheformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cacheformat.cpp -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fhformat.so CMakeFiles/fhformat.dir/fhformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 56%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fastaformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 58%] Built target fastsearchformat +[ 56%] Built target fastaformat make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= -[ 58%] Linking CXX shared module ../../lib/x86_64-linux-gnu/molreport.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/depend.internal". Scanning dependencies of target fpsformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/molreport.so CMakeFiles/molreport.dir/molreport.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 58%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o +[ 56%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfpsformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fpsformat.dir/fpsformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/fpsformat.cpp +[ 56%] Linking CXX shared module ../../lib/x86_64-linux-gnu/molreport.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/molreport.so CMakeFiles/molreport.dir/molreport.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 57%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fingerprintformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 +[ 57%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gamessukformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 58%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fastsearchformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 58%] Built target molreport make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend -[ 58%] Linking CXX shared module ../../lib/x86_64-linux-gnu/featformat.so make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/depend.internal". Scanning dependencies of target freefracformat -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/featformat.so CMakeFiles/featformat.dir/featformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 58%] Built target fhformat -make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend [ 58%] Building CXX object src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfreefracformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/freefracformat.dir/freefracformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/freefracformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 58%] Built target fingerprintformat +make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfreefracformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/freefracformat.dir/freefracformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/freefracformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/depend.internal". Scanning dependencies of target crystal09format make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 59%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrystal09format_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/crystal09format.dir/crystal09format.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/crystal09format.cpp -[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fingerprintformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 60%] Built target featformat +[ 59%] Built target fastsearchformat make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend -[ 60%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opsplit.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/depend.internal". Scanning dependencies of target groformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 60%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgroformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/groformat.dir/groformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/groformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 60%] Built target fingerprintformat +[ 59%] Built target gamessukformat make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= +[ 59%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgroformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/groformat.dir/groformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/groformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/depend.internal". Scanning dependencies of target smileyformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 60%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o +[ 59%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsmileyformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/smileyformat.dir/smileyformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/smileyformat.cpp -[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/exyzformat.so +[ 59%] Linking CXX shared module ../../lib/x86_64-linux-gnu/exyzformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/exyzformat.so CMakeFiles/exyzformat.dir/exyzformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 59%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fhformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fhformat.so CMakeFiles/fhformat.dir/fhformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/dlpolyformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 -[ 60%] Built target exyzformat +[ 59%] Built target exyzformat make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/depend.internal". @@ -4789,13 +4806,10 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 60%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o +[ 59%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dvaspformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/vaspformat.dir/vaspformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/vaspformat.cpp -[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cacheformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 60%] Built target dlpolyformat +[ 59%] Built target fhformat make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= @@ -4805,10 +4819,18 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 61%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o +[ 60%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dghemicalformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/ghemicalformat.cpp +[ 60%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opsplit.cpp +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cacheformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/dlpolyformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 61%] Built target cacheformat +[ 60%] Built target cacheformat make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= @@ -4818,18 +4840,41 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 61%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o +[ 60%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/lmpdatformat.cpp -[ 61%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fpsformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 61%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/optransform.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 61%] Built target fpsformat +[ 60%] Built target dlpolyformat make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/depend.internal". +Scanning dependencies of target cssrformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcssrformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cssrformat.dir/cssrformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cssrformat.cpp +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/fpsformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 +[ 60%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -c /build/openbabel-3.1.1+dfsg/src/forcefields/forcefielduff.cpp +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Built target fpsformat +make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/depend.internal". +Scanning dependencies of target msmsformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsmsformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/msmsformat.dir/msmsformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/msmsformat.cpp +[ 60%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/qeq.cpp /build/openbabel-3.1.1+dfsg/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /build/openbabel-3.1.1+dfsg/src/formats/smilesformat.cpp:2865:35: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2865 | snprintf(tcount, 10, "%d", hcount); @@ -4873,54 +4918,30 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/depend.internal". -Scanning dependencies of target cssrformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 61%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcssrformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cssrformat.dir/cssrformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/cssrformat.cpp -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cifformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cifformat.so CMakeFiles/cifformat.dir/cifformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Built target cifformat -make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/depend.internal". -Scanning dependencies of target msmsformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsmsformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/msmsformat.dir/msmsformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/msmsformat.cpp -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/groformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/groformat.so CMakeFiles/groformat.dir/groformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/ghemicalformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Built target groformat +[ 60%] Built target ghemicalformat make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/freefracformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/depend.internal". Scanning dependencies of target lpmdformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlpmdformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/lpmdformat.cpp -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/freefracformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/freefracformat.so CMakeFiles/freefracformat.dir/freefracformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cssrformat.so +[ 60%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlpmdformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/lpmdformat.cpp +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cssrformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Built target freefracformat +[ 60%] Built target freefracformat make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= @@ -4929,14 +4950,13 @@ Scanning dependencies of target msiformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/ghemicalformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 62%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o +[ 60%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/msiformat.dir/msiformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/msiformat.cpp +[ 60%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/optransform.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Built target cssrformat +[ 60%] Built target cssrformat make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= @@ -4945,72 +4965,11 @@ Scanning dependencies of target pdbqtformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Built target ghemicalformat -make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend -[ 62%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o +[ 60%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbqtformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pdbqtformat.cpp -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/depend.internal". -Scanning dependencies of target mmcifformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/msmsformat.so -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/msmsformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 -[ 62%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmcifformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mmcifformat.cpp -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 62%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/partialcharges.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Built target msmsformat -make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/depend.internal". -Scanning dependencies of target mpqcformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpqcformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mpqcformat.cpp -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gaussformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/crystal09format.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 62%] Built target gaussformat -make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend -[ 62%] Built target crystal09format -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/depend.internal". -Scanning dependencies of target mpdformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -Scanning dependencies of target siestaformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 63%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o -[ 63%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpdformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mpdformat.dir/mpdformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mpdformat.cpp -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsiestaformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/siestaformat.dir/siestaformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/siestaformat.cpp /build/openbabel-3.1.1+dfsg/src/formats/lmpdatformat.cpp: In member function 'virtual bool OpenBabel::LMPDATFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-3.1.1+dfsg/src/formats/lmpdatformat.cpp:534:38: warning: '%11s' directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=] 534 | "%-4d %4d %4d %4d %4d %4d # %11s\n", @@ -5060,54 +5019,117 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 63%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/readconformers.cpp -[ 64%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemdoodlejsonformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdoodlejsonformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemdoodlejsonformat.so CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 65%] Linking CXX shared module ../../lib/x86_64-linux-gnu/msiformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/msiformat.so CMakeFiles/msiformat.dir/msiformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 65%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mpqcformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 -[ 65%] Linking CXX shared module ../../lib/x86_64-linux-gnu/smileyformat.so +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/gaussformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Built target msmsformat +make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= +[ 60%] Built target gaussformat +make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/depend.internal". +Scanning dependencies of target mmcifformat +Scanning dependencies of target mpqcformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/crystal09format.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 +[ 60%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpqcformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mpqcformat.cpp +[ 60%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmcifformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mmcifformat.cpp +[ 60%] Linking CXX shared module ../../lib/x86_64-linux-gnu/groformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/groformat.so CMakeFiles/groformat.dir/groformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Built target crystal09format +make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/depend.internal". +Scanning dependencies of target siestaformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsiestaformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/siestaformat.dir/siestaformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/siestaformat.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 60%] Built target groformat +make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/depend.internal". +Scanning dependencies of target mpdformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 61%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpdformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mpdformat.dir/mpdformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/mpdformat.cpp +[ 61%] Linking CXX shared module ../../lib/x86_64-linux-gnu/lmpdatformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cifformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cifformat.so CMakeFiles/cifformat.dir/cifformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 62%] Linking CXX shared module ../../lib/x86_64-linux-gnu/smileyformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 65%] Built target chemdoodlejsonformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 62%] Built target lmpdatformat make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/depend.internal". +[ 63%] Linking CXX shared module ../../lib/x86_64-linux-gnu/msiformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 Scanning dependencies of target pointcloudformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 65%] Built target msiformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/msiformat.so CMakeFiles/msiformat.dir/msiformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 63%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pointcloudformat.cpp +[ 63%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mpqcformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 63%] Built target cifformat make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend -[ 65%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/pointcloudformat.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/depend.internal". Scanning dependencies of target shelxformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.cpp.o +[ 64%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dshelxformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/shelxformat.dir/shelxformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/shelxformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Built target smileyformat +[ 64%] Built target smileyformat make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend -[ 66%] Built target mpqcformat -make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= +[ 64%] Built target msiformat +make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/depend.internal". @@ -5122,13 +5144,41 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o +[ 64%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dunichemformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/unichemformat.dir/unichemformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/unichemformat.cpp -[ 66%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 64%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dopendxformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/opendxformat.dir/opendxformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/opendxformat.cpp -[ 66%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mpdformat.so +[ 64%] Built target mpqcformat +make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". +Scanning dependencies of target viewmolformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 64%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dviewmolformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/viewmolformat.cpp +[ 64%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mpdformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 64%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/partialcharges.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 64%] Built target mpdformat +make -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/depend.internal". +Scanning dependencies of target wlnformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 64%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dwlnformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/wlnformat.dir/wlnformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/wlnformat.cpp /build/openbabel-3.1.1+dfsg/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OpenBabel::OBAtom*, std::ostream&, unsigned int)': /build/openbabel-3.1.1+dfsg/src/formats/pdbqtformat.cpp:345:52: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 345 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); @@ -5172,42 +5222,11 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 66%] Linking CXX shared module ../../lib/x86_64-linux-gnu/lmpdatformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Built target mpdformat -make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". -Scanning dependencies of target viewmolformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dviewmolformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/viewmolformat.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Built target lmpdatformat -make -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/depend.internal". -Scanning dependencies of target wlnformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dwlnformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/wlnformat.dir/wlnformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/wlnformat.cpp -[ 67%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/sort.cpp -[ 68%] Linking CXX shared module ../../lib/x86_64-linux-gnu/smilesformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 65%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemdoodlejsonformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdoodlejsonformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemdoodlejsonformat.so CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 68%] Built target smilesformat +[ 65%] Built target chemdoodlejsonformat make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= @@ -5217,35 +5236,38 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 68%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o +[ 65%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxedformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xedformat.dir/xedformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xedformat.cpp -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/vaspformat.so +[ 65%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pointcloudformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 65%] Linking CXX shared module ../../lib/x86_64-linux-gnu/shelxformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 65%] Linking CXX shared module ../../lib/x86_64-linux-gnu/unichemformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 66%] Linking CXX shared module ../../lib/x86_64-linux-gnu/vaspformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/lpmdformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Built target vaspformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 66%] Built target pointcloudformat make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= +[ 66%] Linking CXX shared module ../../lib/x86_64-linux-gnu/viewmolformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/depend.internal". +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Scanning dependencies of target yasaraformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dyasaraformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/yasaraformat.cpp -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/viewmolformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/unichemformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Built target lpmdformat +[ 66%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dyasaraformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/yasaraformat.cpp +[ 66%] Built target shelxformat make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= @@ -5255,10 +5277,10 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o +[ 66%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddmolformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/dmolformat.dir/dmolformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/dmolformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Built target viewmolformat +[ 66%] Built target unichemformat make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= @@ -5268,47 +5290,43 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o +[ 66%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drsmiformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/rsmiformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Built target unichemformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 66%] Built target vaspformat make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend +[ 66%] Built target viewmolformat make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". -Scanning dependencies of target alchemyformat -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dalchemyformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/alchemyformat.cpp -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pointcloudformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dwlnformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/wln-nextmove.cpp -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/shelxformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 -[ 69%] Built target pointcloudformat make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend +[ 66%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/readconformers.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/depend.internal". Scanning dependencies of target xtcformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/build +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +Scanning dependencies of target alchemyformat +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build +[ 66%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/xtcformat.dir/xtcformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dwlnformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/wln-nextmove.cpp +[ 66%] Building CXX object src/formats/CMakeFiles/xtcformat.dir/xtcformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxtcformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xtcformat.dir/xtcformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xtcformat.cpp -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xedformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xedformat.so CMakeFiles/xedformat.dir/xedformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 66%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dalchemyformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/alchemyformat.cpp +[ 66%] Linking CXX shared module ../../lib/x86_64-linux-gnu/opendxformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Built target shelxformat +[ 66%] Built target opendxformat make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= @@ -5318,11 +5336,17 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o +[ 66%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/png2format.dir/png2format.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/png2format.cpp +[ 66%] Linking CXX shared module ../../lib/x86_64-linux-gnu/siestaformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/siestaformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Built target xedformat +[ 67%] Linking CXX shared module ../../lib/x86_64-linux-gnu/smilesformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 +[ 67%] Built target siestaformat make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/depend.internal". @@ -5331,16 +5355,16 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o +[ 67%] Linking CXX shared module ../../lib/x86_64-linux-gnu/lpmdformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1 +[ 67%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/cdxmlformat.cpp -[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/siestaformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/siestaformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 70%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pdbqtformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 67%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xedformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 70%] Built target siestaformat +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xedformat.so CMakeFiles/xedformat.dir/xedformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 67%] Built target smilesformat make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= @@ -5350,22 +5374,10 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 70%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/cmlformat.cpp -[ 70%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mmcifformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 70%] Linking CXX shared module ../../lib/x86_64-linux-gnu/dmolformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 70%] Linking CXX shared module ../../lib/x86_64-linux-gnu/opendxformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 -[ 70%] Linking CXX shared module ../../lib/x86_64-linux-gnu/alchemyformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 70%] Built target dmolformat +[ 67%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/cmlformat.cpp +[ 67%] Built target lpmdformat make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= @@ -5375,8 +5387,7 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 70%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/cmlreactformat.cpp +[ 67%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o /build/openbabel-3.1.1+dfsg/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-3.1.1+dfsg/src/formats/yasaraformat.cpp:572:36: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 572 | snprintf(&buffer[12], 4, "%4d",res->GetNum()); } @@ -5399,102 +5410,107 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/cmlreactformat.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 70%] Built target alchemyformat +[ 67%] Built target xedformat make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= -[ 70%] Built target mmcifformat -make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/depend.internal". -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake --color= Scanning dependencies of target chemdrawcdx -[ 70%] Built target pdbqtformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build -make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 67%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawcdx_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/chemdrawcdx.cpp +[ 67%] Linking CXX shared module ../../lib/x86_64-linux-gnu/yasaraformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 67%] Built target yasaraformat +make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/depend.internal". -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= Scanning dependencies of target pubchemjsonformat make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 67%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/json/pubchemjsonformat.cpp +[ 68%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/sort.cpp +[ 68%] Linking CXX shared module ../../lib/x86_64-linux-gnu/mmcifformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 68%] Linking CXX shared module ../../lib/x86_64-linux-gnu/dmolformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 68%] Built target mmcifformat +make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= +[ 68%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xtcformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtcformat.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/depend.internal". Scanning dependencies of target obrms +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xtcformat.so CMakeFiles/xtcformat.dir/xtcformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 70%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -[ 70%] Built target opendxformat -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawcdx_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/chemdrawcdx.cpp +[ 68%] Linking CXX shared module ../../lib/x86_64-linux-gnu/alchemyformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 +[ 69%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrms.dir/obrms.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obrms.cpp +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 69%] Built target dmolformat make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend -[ 70%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/json/pubchemjsonformat.cpp make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= -[ 71%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.cpp.o Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/depend.internal". -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrms.dir/obrms.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obrms.cpp Scanning dependencies of target obspectrophore make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 71%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o +[ 69%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obspectrophore.cpp -[ 71%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opisomorph.cpp -[ 71%] Linking CXX shared module ../../lib/x86_64-linux-gnu/yasaraformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 71%] Built target yasaraformat -[ 71%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/cairopainter.cpp -[ 71%] Linking CXX shared module ../../lib/x86_64-linux-gnu/xtcformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtcformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/xtcformat.so CMakeFiles/xtcformat.dir/xtcformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 69%] Built target xtcformat make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend -[ 71%] Built target xtcformat -make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= +[ 69%] Built target alchemyformat +make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake --color= -Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/depend.internal". -Scanning dependencies of target obthermo +Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/depend.internal". Scanning dependencies of target obgrep -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +Scanning dependencies of target obthermo make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 71%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.cpp.o +[ 69%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgrep.dir/obgrep.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obgrep.cpp -[ 71%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.cpp.o +[ 69%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obthermo.dir/obthermo.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obthermo.cpp -[ 72%] Linking CXX shared module ../../lib/x86_64-linux-gnu/wlnformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/wlnformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/wlnformat.so CMakeFiles/wlnformat.dir/wlnformat.cpp.o CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 72%] Linking CXX shared module ../../lib/x86_64-linux-gnu/rsmiformat.so +[ 69%] Linking CXX shared module ../../lib/x86_64-linux-gnu/rsmiformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 72%] Built target rsmiformat +[ 69%] Built target rsmiformat make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= @@ -5504,13 +5520,15 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 73%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o +[ 70%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obtautomer.dir/obtautomer.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obtautomer.cpp -[ 74%] Linking CXX shared module ../../lib/x86_64-linux-gnu/png2format.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/png2format.so CMakeFiles/png2format.dir/png2format.cpp.o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 71%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pdbqtformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 72%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 74%] Built target wlnformat +[ 72%] Built target pdbqtformat make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= @@ -5520,8 +5538,10 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 74%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.cpp.o +[ 72%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obabel.dir/obabel.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obabel.cpp +[ 72%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -c /build/openbabel-3.1.1+dfsg/src/depict/cairopainter.cpp /build/openbabel-3.1.1+dfsg/tools/obabel.cpp:104:29: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 104 | << __DATE__ << " -- " << __TIME__ << endl; | ^~~~~~~~ @@ -5534,10 +5554,17 @@ /build/openbabel-3.1.1+dfsg/tools/obabel.cpp:418:11: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 418 | << __TIME__ << endl; | ^~~~~~~~ -[ 75%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp +[ 72%] Linking CXX executable ../bin/obthermo +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obthermo.dir/obthermo.cpp.o -o ../bin/obthermo ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 73%] Linking CXX shared module ../../lib/x86_64-linux-gnu/wlnformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/wlnformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/wlnformat.so CMakeFiles/wlnformat.dir/wlnformat.cpp.o CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 73%] Linking CXX executable ../bin/obtautomer +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obtautomer.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obtautomer.dir/obtautomer.cpp.o -o ../bin/obtautomer ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Built target png2format +[ 73%] Built target obthermo make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= @@ -5547,52 +5574,45 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Building CXX object tools/CMakeFiles/obminimize.dir/obminimize.cpp.o +[ 73%] Building CXX object tools/CMakeFiles/obminimize.dir/obminimize.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obminimize.dir/obminimize.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obminimize.cpp -[ 75%] Linking CXX executable ../bin/obspectrophore -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -o ../bin/obspectrophore ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 75%] Linking CXX executable ../bin/obthermo -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obthermo.dir/obthermo.cpp.o -o ../bin/obthermo ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 75%] Linking CXX executable ../bin/obgrep +[ 73%] Linking CXX executable ../bin/obgrep cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgrep.dir/obgrep.cpp.o -o ../bin/obgrep ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Built target obspectrophore +[ 73%] Built target obtautomer make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Built target obthermo +[ 73%] Built target wlnformat make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= +Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/depend.internal". +Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotate.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotate.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotate.dir/depend.internal". Scanning dependencies of target obrotate make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrotate.dir/obrotate.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obrotate.cpp -Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/depend.internal". -Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/depend.internal". Scanning dependencies of target obdistgen make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Linking CXX executable ../bin/obrms -[ 75%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 +[ 73%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrotate.dir/obrotate.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obrotate.cpp +[ 73%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obdistgen.dir/obdistgen.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obdistgen.cpp +[ 74%] Linking CXX shared module ../../lib/x86_64-linux-gnu/png2format.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/png2format.so CMakeFiles/png2format.dir/png2format.cpp.o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 74%] Linking CXX executable ../bin/obrms +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Built target obgrep -[ 75%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrms.dir/obrms.cpp.o -o ../bin/obrms ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Built target obrms +[ 74%] Built target obgrep make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= @@ -5602,19 +5622,16 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Building CXX object tools/CMakeFiles/obenergy.dir/obenergy.cpp.o +[ 74%] Building CXX object tools/CMakeFiles/obenergy.dir/obenergy.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obenergy.dir/obenergy.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obenergy.cpp -[ 75%] Linking CXX executable ../bin/obabel -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obabel.dir/obabel.cpp.o -o ../bin/obabel ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 75%] Linking CXX executable ../bin/obminimize -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 -[ 75%] Built target obabel +[ 75%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_forcefields.so +[ 75%] Built target png2format make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obminimize.dir/obminimize.cpp.o -o ../bin/obminimize ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfit.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfit.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfit.dir/depend.internal". Scanning dependencies of target obfit @@ -5623,11 +5640,10 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 76%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obfit.dir/obfit.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obfit.cpp -[ 76%] Linking CXX executable ../bin/obtautomer -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obtautomer.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obtautomer.dir/obtautomer.cpp.o -o ../bin/obtautomer ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 76%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opisomorph.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 76%] Built target obminimize +[ 76%] Built target obrms make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= @@ -5639,8 +5655,11 @@ make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' [ 76%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obprobe.dir/obprobe.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obprobe.cpp +[ 76%] Linking CXX executable ../bin/obspectrophore +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -o ../bin/obspectrophore ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 76%] Built target obtautomer +[ 76%] Built target plugin_forcefields make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obmm.dir/DependInfo.cmake --color= @@ -5650,71 +5669,58 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 76%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cdxmlformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 76%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/ophighlight.cpp [ 76%] Building CXX object tools/CMakeFiles/obmm.dir/obmm.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obmm.dir/obmm.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obmm.cpp +[ 76%] Linking CXX executable ../bin/obabel +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obabel.dir/obabel.cpp.o -o ../bin/obabel ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 76%] Built target cdxmlformat +[ 76%] Built target obspectrophore make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= +[ 76%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cdxmlformat.so Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/depend.internal". +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 Scanning dependencies of target obgen make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 76%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgen.dir/obgen.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obgen.cpp -[ 77%] Linking CXX executable ../bin/obrotate -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrotate.dir/obrotate.cpp.o -o ../bin/obrotate ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Built target obrotate +[ 76%] Built target obabel +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= +[ 76%] Built target cdxmlformat +make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/depend.internal". +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfitall.dir/DependInfo.cmake --color= Scanning dependencies of target obprop make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obprop.dir/obprop.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obprop.cpp -[ 77%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemdrawcdx.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 -[ 77%] Linking CXX executable ../bin/obdistgen -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obdistgen.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obdistgen.dir/obdistgen.cpp.o -o ../bin/obdistgen ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 77%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/xout.cpp -[ 77%] Linking CXX executable ../bin/obenergy -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obenergy.dir/obenergy.cpp.o -o ../bin/obenergy ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Built target chemdrawcdx -make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend -[ 77%] Linking CXX executable ../bin/obprobe -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfitall.dir/DependInfo.cmake --color= -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfitall.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfitall.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfitall.dir/depend.internal". Scanning dependencies of target obfitall make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build +[ 76%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.cpp.o make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprobe.dir/obprobe.cpp.o -o ../bin/obprobe ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Building CXX object tools/CMakeFiles/obfitall.dir/obfitall.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obprop.dir/obprop.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obprop.cpp +[ 76%] Building CXX object tools/CMakeFiles/obfitall.dir/obfitall.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obfitall.dir/obfitall.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obfitall.cpp -[ 77%] Built target obdistgen +[ 76%] Linking CXX executable ../bin/obminimize +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obminimize.dir/obminimize.cpp.o -o ../bin/obminimize ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 76%] Built target obminimize make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= @@ -5724,8 +5730,16 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.cpp.o +[ 76%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrotamer.dir/obrotamer.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obrotamer.cpp +[ 77%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp +[ 77%] Linking CXX executable ../bin/obenergy +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obenergy.dir/obenergy.cpp.o -o ../bin/obenergy ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 77%] Linking CXX executable ../bin/obdistgen +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obdistgen.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obdistgen.dir/obdistgen.cpp.o -o ../bin/obdistgen ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 77%] Built target obenergy make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend @@ -5734,13 +5748,16 @@ Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/depend.internal". Scanning dependencies of target obconformer +[ 78%] Linking CXX executable ../bin/obrotate +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Building CXX object tools/CMakeFiles/obconformer.dir/obconformer.cpp.o +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrotate.dir/obrotate.cpp.o -o ../bin/obrotate ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 78%] Building CXX object tools/CMakeFiles/obconformer.dir/obconformer.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obconformer.dir/obconformer.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obconformer.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Built target obprobe +[ 78%] Built target obdistgen make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obsym.dir/DependInfo.cmake --color= @@ -5750,25 +5767,32 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 77%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.cpp.o +[ 78%] Linking CXX executable ../bin/obprobe +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 +[ 78%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obsym.dir/obsym.cpp.o -c /build/openbabel-3.1.1+dfsg/tools/obsym.cpp -[ 78%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp -[ 78%] Linking CXX executable ../bin/obfit -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obfit.dir/obfit.cpp.o -o ../bin/obfit ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 79%] Linking CXX executable ../bin/obgen -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgen.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgen.dir/obgen.cpp.o -o ../bin/obgen ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprobe.dir/obprobe.cpp.o -o ../bin/obprobe ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 79%] Built target obfit +[ 78%] Built target obrotate make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/GUI /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/GUI /build/openbabel-3.1.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/src/GUI/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/depend.internal". +Scanning dependencies of target obgui make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 79%] Built target obgen +make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build +[ 78%] Linking CXX shared module ../../lib/x86_64-linux-gnu/chemdrawcdx.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 79%] Linking CXX executable ../bin/obgen +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgen.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 79%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/OBGUI.cpp.o -c /build/openbabel-3.1.1+dfsg/src/GUI/OBGUI.cpp +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgen.dir/obgen.cpp.o -o ../bin/obgen ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 79%] Built target obprobe make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= @@ -5778,128 +5802,138 @@ make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 80%] Linking CXX executable ../bin/obmm -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obmm.dir/link.txt --verbose=1 -[ 80%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o +[ 79%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/roundtrip.dir/roundtrip.cpp.o -c /build/openbabel-3.1.1+dfsg/test/roundtrip.cpp -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obmm.dir/obmm.cpp.o -o ../bin/obmm ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 79%] Built target chemdrawcdx +[ 79%] Linking CXX executable ../bin/obfit +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= +[ 79%] Built target obgen +make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obfit.dir/obfit.cpp.o -o ../bin/obfit ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 Dependee "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/depend.internal". Scanning dependencies of target test_inchiwrite make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 80%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -c /build/openbabel-3.1.1+dfsg/test/inchiwrite.cpp -[ 80%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/conformer.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 80%] Built target obmm -make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/depend.internal". -[ 81%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opalign.cpp -Scanning dependencies of target obgui -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build +make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 81%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/OBGUI.cpp.o -c /build/openbabel-3.1.1+dfsg/src/GUI/OBGUI.cpp -[ 81%] Linking CXX executable ../bin/obsym -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obsym.dir/link.txt --verbose=1 +[ 79%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -c /build/openbabel-3.1.1+dfsg/test/inchiwrite.cpp Scanning dependencies of target test_runner make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obsym.dir/obsym.cpp.o -o ../bin/obsym ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 82%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o +[ 80%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/test_runner.cpp.o -c /build/openbabel-3.1.1+dfsg/builddir/test/test_runner.cpp -[ 82%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/aligntest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/aligntest.cpp -[ 82%] Linking CXX executable ../bin/obprop -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprop.dir/obprop.cpp.o -o ../bin/obprop ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 82%] Built target obsym +[ 80%] Built target obfit +[ 80%] Linking CXX executable ../bin/obprop make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/scripts /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/scripts /build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 +[ 80%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/aligntest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/aligntest.cpp Dependee "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/depend.internal". +[ 81%] Linking CXX executable ../bin/obmm +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprop.dir/obprop.cpp.o -o ../bin/obprop ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obmm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obmm.dir/obmm.cpp.o -o ../bin/obmm ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +Scanning dependencies of target bindings_perl +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 81%] Building CXX object scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_perl_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/python3.9 -I/usr/lib/x86_64-linux-gnu/perl/5.32/CORE -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -c /build/openbabel-3.1.1+dfsg/scripts/perl/openbabel-perl.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 82%] Built target obprop +[ 81%] Built target obprop make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/scripts /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/scripts /build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= Dependee "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/depend.internal". Dependee "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/depend.internal". +[ 81%] Linking CXX executable ../bin/obfitall +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfitall.dir/link.txt --verbose=1 +Scanning dependencies of target bindings_python +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obfitall.dir/obfitall.cpp.o -o ../bin/obfitall ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 81%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o +[ 82%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/ophighlight.cpp +cd /build/openbabel-3.1.1+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_python_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/python3.9 -I/usr/lib/x86_64-linux-gnu/perl/5.32/CORE -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -c /build/openbabel-3.1.1+dfsg/scripts/python/openbabel/openbabel-python.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 82%] Built target obmm +[ 82%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/xout.cpp +[ 82%] Linking CXX executable ../bin/obsym +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obsym.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obsym.dir/obsym.cpp.o -o ../bin/obsym ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 82%] Built target obfitall +[ 82%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/conformer.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 82%] Built target obsym +[ 82%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -c /build/openbabel-3.1.1+dfsg/src/charges/qtpie.cpp [ 82%] Linking CXX executable ../bin/obrotamer cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrotamer.dir/obrotamer.cpp.o -o ../bin/obrotamer ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 83%] Linking CXX executable ../bin/roundtrip cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/roundtrip.dir/roundtrip.cpp.o -o ../bin/roundtrip ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 83%] Linking CXX executable ../bin/obfitall [ 83%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfitall.dir/link.txt --verbose=1 cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/getinchi.cpp -[ 84%] Linking CXX executable ../bin/obconformer -cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obfitall.dir/obfitall.cpp.o -o ../bin/obfitall ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obconformer.dir/obconformer.cpp.o -o ../bin/obconformer ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 84%] Built target obrotamer -[ 84%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opconfab.cpp -Scanning dependencies of target bindings_python +[ 83%] Built target obrotamer +[ 84%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opalign.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 84%] Built target roundtrip [ 84%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cmlreactformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 +[ 84%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 85%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_python_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/python3.9 -I/usr/lib/x86_64-linux-gnu/perl/5.32/CORE -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -c /build/openbabel-3.1.1+dfsg/scripts/python/openbabel/openbabel-python.cpp +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -c /build/openbabel-3.1.1+dfsg/src/ops/opconfab.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 85%] Built target roundtrip -[ 85%] Building CXX object test/CMakeFiles/test_runner.dir/aliastest.cpp.o +[ 84%] Built target cmlreactformat +[ 84%] Building CXX object test/CMakeFiles/test_runner.dir/aliastest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/aliastest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/aliastest.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 85%] Built target obconformer -[ 85%] Built target obfitall +[ 85%] Linking CXX executable ../bin/obconformer +cd /build/openbabel-3.1.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obconformer.dir/obconformer.cpp.o -o ../bin/obconformer ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +[ 85%] Linking CXX executable ../bin/test_inchiwrite +cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -o ../bin/test_inchiwrite ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/automorphismtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/automorphismtest.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 85%] Built target obconformer [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/buildertest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/buildertest.cpp -Scanning dependencies of target bindings_perl make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build -make[4]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 85%] Built target cmlreactformat -[ 85%] Building CXX object scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_perl_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/python3.9 -I/usr/lib/x86_64-linux-gnu/perl/5.32/CORE -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -c /build/openbabel-3.1.1+dfsg/scripts/perl/openbabel-perl.cpp -[ 86%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o +[ 85%] Built target test_inchiwrite +[ 85%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/stdwx.cpp.o -c /build/openbabel-3.1.1+dfsg/src/GUI/stdwx.cpp +[ 86%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/optswx.cpp.o -c /build/openbabel-3.1.1+dfsg/src/GUI/optswx.cpp +[ 86%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -c /build/openbabel-3.1.1+dfsg/src/formats/xml/xml.cpp +[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/canonconsistenttest.cpp -[ 86%] Linking CXX executable ../bin/test_inchiwrite -cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -o ../bin/test_inchiwrite ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 86%] Built target test_inchiwrite -[ 86%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o +[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/canonfragmenttest.cpp -[ 87%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pubchemjsonformat.so -cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchemjsonformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pubchemjsonformat.so CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 87%] Built target pubchemjsonformat [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/canonstabletest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/canonstabletest.cpp [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o @@ -5908,131 +5942,132 @@ cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/cifspacegrouptest.cpp [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cistranstest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/cistranstest.cpp +[ 88%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_ops.so +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 88%] Built target plugin_ops [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/conversiontest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/conversiontest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/conversiontest.cpp [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/graphsymtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/graphsymtest.cpp -[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o +[ 89%] Linking CXX shared module ../../lib/x86_64-linux-gnu/pubchemjsonformat.so +cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchemjsonformat.dir/link.txt --verbose=1 +[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/gziptest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/gziptest.cpp -[ 88%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_ops.so -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/addhtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/addhtest.cpp -[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/implicitHtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/implicitHtest.cpp +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/pubchemjsonformat.so CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 89%] Linking CXX shared module ../../lib/x86_64-linux-gnu/cmlformat.so cd /build/openbabel-3.1.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 +[ 89%] Built target pubchemjsonformat /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/x86_64-linux-gnu/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o +[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/addhtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/addhtest.cpp +[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/implicitHtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/implicitHtest.cpp +[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/lssrtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/lssrtest.cpp make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 89%] Built target cmlformat -[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o +[ 90%] Built target cmlformat +[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/isomorphismtest.cpp -[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.cpp.o +[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/multicmltest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/multicmltest.cpp -[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/periodictest.cpp.o +[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/periodictest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/periodictest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/periodictest.cpp -[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o +[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/regressionstest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/regressionstest.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 90%] Built target plugin_ops -[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o +[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/rotortest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/rotortest.cpp -[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.cpp.o +[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/shuffletest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/shuffletest.cpp -[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.cpp.o +[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smilestest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/smilestest.cpp -[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o +[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/spectrophoretest.cpp -[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o +[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/squareplanartest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/squareplanartest.cpp -[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.cpp.o +[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/stereotest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/stereotest.cpp -[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o +[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/stereoperceptiontest.cpp -[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.cpp.o +[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tautomertest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/tautomertest.cpp -[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o +[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/tetrahedraltest.cpp -[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o +[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/tetranonplanartest.cpp -[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o +[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/tetraplanartest.cpp -[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o +[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/uniqueidtest.cpp -[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/maereadertest.cpp.o +[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/maereadertest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/maereadertest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/maereadertest.cpp -[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o +[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/aromatest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/aromatest.cpp -[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o +[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/atom.cpp.o -c /build/openbabel-3.1.1+dfsg/test/atom.cpp -[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o +[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/bond.cpp.o -c /build/openbabel-3.1.1+dfsg/test/bond.cpp -[ 93%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_charges.so -cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.cpp.o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o CMakeFiles/plugin_charges.dir/charges/none.cpp.o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o +[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cansmi.cpp.o -c /build/openbabel-3.1.1+dfsg/test/cansmi.cpp -[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o -[ 93%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o -c /build/openbabel-3.1.1+dfsg/test/charge_gasteiger.cpp +[ 94%] Linking CXX executable ../../bin/obgui +cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgui.dir/OBGUI.cpp.o CMakeFiles/obgui.dir/stdwx.cpp.o CMakeFiles/obgui.dir/optswx.cpp.o -o ../../bin/obgui ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk3u_core-3.0 -lwx_gtk3u_adv-3.0 +[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o -c /build/openbabel-3.1.1+dfsg/test/charge_mmff94.cpp -[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.cpp.o +[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o +cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o -c /build/openbabel-3.1.1+dfsg/test/charge_gasteiger.cpp +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 94%] Built target obgui +[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/conversion.cpp.o -c /build/openbabel-3.1.1+dfsg/test/conversion.cpp -[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.cpp.o +[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/datatest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/datatest.cpp -[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.cpp.o +[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffgaff.cpp.o -c /build/openbabel-3.1.1+dfsg/test/ffgaff.cpp -[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.cpp.o +[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffghemical.cpp.o -c /build/openbabel-3.1.1+dfsg/test/ffghemical.cpp -[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o +[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffmmff94.cpp.o -c /build/openbabel-3.1.1+dfsg/test/ffmmff94.cpp -[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.cpp.o +[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffuff.cpp.o -c /build/openbabel-3.1.1+dfsg/test/ffuff.cpp -[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.cpp.o +[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/formalcharge.cpp.o -c /build/openbabel-3.1.1+dfsg/test/formalcharge.cpp -[ 95%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/stdwx.cpp.o -c /build/openbabel-3.1.1+dfsg/src/GUI/stdwx.cpp -[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/format.cpp.o +[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/format.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/format.cpp.o -c /build/openbabel-3.1.1+dfsg/test/format.cpp -[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o +[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/formula.cpp.o -c /build/openbabel-3.1.1+dfsg/test/formula.cpp -[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o +[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/internalcoord.cpp.o -c /build/openbabel-3.1.1+dfsg/test/internalcoord.cpp -[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o +[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o -c /build/openbabel-3.1.1+dfsg/test/invalidsmarts.cpp -[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o +[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o -c /build/openbabel-3.1.1+dfsg/test/invalidsmiles.cpp -[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o +[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/iterators.cpp.o -c /build/openbabel-3.1.1+dfsg/test/iterators.cpp -[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o +[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/logp_psa.cpp.o -c /build/openbabel-3.1.1+dfsg/test/logp_psa.cpp -[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o +[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/math.cpp.o -c /build/openbabel-3.1.1+dfsg/test/math.cpp -[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o +[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/mol.cpp.o -c /build/openbabel-3.1.1+dfsg/test/mol.cpp -[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o +[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/pdbreadfile.cpp.o -c /build/openbabel-3.1.1+dfsg/test/pdbreadfile.cpp -[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o +[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/phmodel.cpp.o -c /build/openbabel-3.1.1+dfsg/test/phmodel.cpp -[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/residue.cpp.o +[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/residue.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/residue.cpp.o -c /build/openbabel-3.1.1+dfsg/test/residue.cpp -[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.cpp.o +[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ringtest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/ringtest.cpp -[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.cpp.o +[ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smartstest.cpp.o -c /build/openbabel-3.1.1+dfsg/test/smartstest.cpp -[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.cpp.o -[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o +[ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smartsparse.cpp.o -c /build/openbabel-3.1.1+dfsg/test/smartsparse.cpp +[ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smilesmatch.cpp.o -c /build/openbabel-3.1.1+dfsg/test/smilesmatch.cpp -[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o +[ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/unitcell.cpp.o -c /build/openbabel-3.1.1+dfsg/test/unitcell.cpp -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 98%] Built target plugin_charges -[ 99%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.cpp.o -cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/optswx.cpp.o -c /build/openbabel-3.1.1+dfsg/src/GUI/optswx.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/cmlreadfile.cpp.o cd /build/openbabel-3.1.1+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/build/openbabel-3.1.1+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-3.1.1+dfsg/builddir/include -I/build/openbabel-3.1.1+dfsg/data -I/build/openbabel-3.1.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-3.1.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o -c /build/openbabel-3.1.1+dfsg/test/cmlreadfile.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.cpp.o @@ -6042,11 +6077,6 @@ /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/test_runner.dir/test_runner.cpp.o CMakeFiles/test_runner.dir/aligntest.cpp.o CMakeFiles/test_runner.dir/aliastest.cpp.o CMakeFiles/test_runner.dir/automorphismtest.cpp.o CMakeFiles/test_runner.dir/buildertest.cpp.o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o CMakeFiles/test_runner.dir/canonstabletest.cpp.o CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cistranstest.cpp.o CMakeFiles/test_runner.dir/conversiontest.cpp.o CMakeFiles/test_runner.dir/graphsymtest.cpp.o CMakeFiles/test_runner.dir/gziptest.cpp.o CMakeFiles/test_runner.dir/addhtest.cpp.o CMakeFiles/test_runner.dir/implicitHtest.cpp.o CMakeFiles/test_runner.dir/lssrtest.cpp.o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o CMakeFiles/test_runner.dir/multicmltest.cpp.o CMakeFiles/test_runner.dir/periodictest.cpp.o CMakeFiles/test_runner.dir/regressionstest.cpp.o CMakeFiles/test_runner.dir/rotortest.cpp.o CMakeFiles/test_runner.dir/shuffletest.cpp.o CMakeFiles/test_runner.dir/smilestest.cpp.o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o CMakeFiles/test_runner.dir/squareplanartest.cpp.o CMakeFiles/test_runner.dir/stereotest.cpp.o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o CMakeFiles/test_runner.dir/tautomertest.cpp.o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o CMakeFiles/test_runner.dir/maereadertest.cpp.o CMakeFiles/test_runner.dir/aromatest.cpp.o CMakeFiles/test_runner.dir/atom.cpp.o CMakeFiles/test_runner.dir/bond.cpp.o CMakeFiles/test_runner.dir/cansmi.cpp.o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o CMakeFiles/test_runner.dir/conversion.cpp.o CMakeFiles/test_runner.dir/datatest.cpp.o CMakeFiles/test_runner.dir/ffgaff.cpp.o CMakeFiles/test_runner.dir/ffghemical.cpp.o CMakeFiles/test_runner.dir/ffmmff94.cpp.o CMakeFiles/test_runner.dir/ffuff.cpp.o CMakeFiles/test_runner.dir/formalcharge.cpp.o CMakeFiles/test_runner.dir/format.cpp.o CMakeFiles/test_runner.dir/formula.cpp.o CMakeFiles/test_runner.dir/internalcoord.cpp.o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o CMakeFiles/test_runner.dir/iterators.cpp.o CMakeFiles/test_runner.dir/logp_psa.cpp.o CMakeFiles/test_runner.dir/math.cpp.o CMakeFiles/test_runner.dir/mol.cpp.o CMakeFiles/test_runner.dir/pdbreadfile.cpp.o CMakeFiles/test_runner.dir/phmodel.cpp.o CMakeFiles/test_runner.dir/residue.cpp.o CMakeFiles/test_runner.dir/ringtest.cpp.o CMakeFiles/test_runner.dir/smartstest.cpp.o CMakeFiles/test_runner.dir/smartsparse.cpp.o CMakeFiles/test_runner.dir/smilesmatch.cpp.o CMakeFiles/test_runner.dir/unitcell.cpp.o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o CMakeFiles/test_runner.dir/obtest.cpp.o -o ../bin/test_runner ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [100%] Built target test_runner -[100%] Linking CXX executable ../../bin/obgui -cd /build/openbabel-3.1.1+dfsg/builddir/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgui.dir/OBGUI.cpp.o CMakeFiles/obgui.dir/stdwx.cpp.o CMakeFiles/obgui.dir/optswx.cpp.o -o ../../bin/obgui ../../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk3u_core-3.0 -lwx_gtk3u_adv-3.0 -make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[100%] Built target obgui In file included from /usr/include/string.h:495, from /usr/include/python3.9/Python.h:30, from /build/openbabel-3.1.1+dfsg/scripts/python/openbabel/openbabel-python.cpp:177: @@ -6059,6 +6089,11 @@ /build/openbabel-3.1.1+dfsg/scripts/python/openbabel/openbabel-python.cpp:48601:27: note: length computed here 48601 | size_t size = strlen(name)+1; | ~~~~~~^~~~~~ +[100%] Linking CXX shared module ../lib/x86_64-linux-gnu/plugin_charges.so +cd /build/openbabel-3.1.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.cpp.o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o CMakeFiles/plugin_charges.dir/charges/none.cpp.o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 +make[4]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[100%] Built target plugin_charges [100%] Linking CXX shared module ../lib/x86_64-linux-gnu/_openbabel.so cd /build/openbabel-3.1.1+dfsg/builddir/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/openbabel-3.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/x86_64-linux-gnu/_openbabel.so CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -lpython3.9 ../lib/x86_64-linux-gnu/libopenbabel.so.7.0.0 @@ -6140,10 +6175,10 @@ BABEL_LIBDIR=/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu \ LD_LIBRARY_PATH=/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu \ dh_auto_test - cd builddir && make -j15 test ARGS\+=-j15 + cd builddir && make -j16 test ARGS\+=-j16 make[2]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' Running tests... -/usr/bin/ctest --force-new-ctest-process -j15 +/usr/bin/ctest --force-new-ctest-process -j16 Test project /build/openbabel-3.1.1+dfsg/builddir Start 1: test_align_1 Start 2: test_align_2 @@ -6160,455 +6195,455 @@ Start 13: test_automorphism_7 Start 14: test_automorphism_8 Start 15: test_automorphism_9 - 1/229 Test #2: test_align_2 ..................... Passed 0.28 sec Start 16: test_automorphism_10 - 2/229 Test #1: test_align_1 ..................... Passed 0.32 sec + 1/229 Test #1: test_align_1 ..................... Passed 0.24 sec Start 17: test_builder_1 - 3/229 Test #3: test_align_3 ..................... Passed 0.30 sec + 2/229 Test #2: test_align_2 ..................... Passed 0.24 sec Start 18: test_builder_2 - 4/229 Test #16: test_automorphism_10 ............. Passed 0.38 sec + 3/229 Test #3: test_align_3 ..................... Passed 0.24 sec Start 19: test_builder_3 - 5/229 Test #7: test_automorphism_1 .............. Passed 0.60 sec + 4/229 Test #7: test_automorphism_1 .............. Passed 0.19 sec Start 20: test_builder_4 - 6/229 Test #9: test_automorphism_3 .............. Passed 0.59 sec + 5/229 Test #8: test_automorphism_2 .............. Passed 0.18 sec Start 21: test_builder_5 - 7/229 Test #11: test_automorphism_5 .............. Passed 0.57 sec + 6/229 Test #9: test_automorphism_3 .............. Passed 0.18 sec Start 22: test_builder_6 - 8/229 Test #12: test_automorphism_6 .............. Passed 0.57 sec + 7/229 Test #6: test_alias_1 ..................... Passed 0.23 sec Start 23: test_canonconsistent_1 - 9/229 Test #13: test_automorphism_7 .............. Passed 0.57 sec + 8/229 Test #12: test_automorphism_6 .............. Passed 0.16 sec Start 24: test_canonconsistent_2 - 10/229 Test #15: test_automorphism_9 .............. Passed 0.56 sec + 9/229 Test #13: test_automorphism_7 .............. Passed 0.15 sec Start 25: test_canonconsistent_3 - 11/229 Test #10: test_automorphism_4 .............. Passed 0.66 sec + 10/229 Test #10: test_automorphism_4 .............. Passed 0.22 sec Start 26: test_canonfragment_1 - 12/229 Test #14: test_automorphism_8 .............. Passed 0.62 sec + 11/229 Test #11: test_automorphism_5 .............. Passed 0.21 sec Start 27: test_canonstable_1 - 13/229 Test #8: test_automorphism_2 .............. Passed 0.72 sec + 12/229 Test #14: test_automorphism_8 .............. Passed 0.18 sec Start 28: test_carspacegroup_1 - 14/229 Test #6: test_alias_1 ..................... Passed 0.76 sec + 13/229 Test #15: test_automorphism_9 .............. Passed 0.19 sec Start 29: test_carspacegroup_2 - 15/229 Test #26: test_canonfragment_1 ............. Passed 0.13 sec + 14/229 Test #16: test_automorphism_10 ............. Passed 0.20 sec Start 30: test_carspacegroup_3 - 16/229 Test #24: test_canonconsistent_2 ........... Passed 0.22 sec + 15/229 Test #5: test_align_5 ..................... Passed 0.38 sec Start 31: test_carspacegroup_4 - 17/229 Test #28: test_carspacegroup_1 ............. Passed 0.26 sec + 16/229 Test #24: test_canonconsistent_2 ........... Passed 0.14 sec Start 32: test_cifspacegroup_1 - 18/229 Test #25: test_canonconsistent_3 ........... Passed 0.32 sec + 17/229 Test #4: test_align_4 ..................... Passed 0.44 sec Start 33: test_cifspacegroup_2 - 19/229 Test #4: test_align_4 ..................... Passed 1.06 sec + 18/229 Test #26: test_canonfragment_1 ............. Passed 0.15 sec Start 34: test_cifspacegroup_3 - 20/229 Test #34: test_cifspacegroup_3 ............. Passed 0.03 sec + 19/229 Test #28: test_carspacegroup_1 ............. Passed 0.13 sec Start 35: test_cifspacegroup_4 - 21/229 Test #5: test_align_5 ..................... Passed 1.11 sec + 20/229 Test #34: test_cifspacegroup_3 ............. Passed 0.03 sec Start 36: test_cifspacegroup_5 - 22/229 Test #20: test_builder_4 ................... Passed 0.60 sec + 21/229 Test #25: test_canonconsistent_3 ........... Passed 0.20 sec Start 37: test_cifspacegroup_6 - 23/229 Test #22: test_builder_6 ................... Passed 0.59 sec + 22/229 Test #22: test_builder_6 ................... Passed 0.32 sec Start 38: test_cifspacegroup_7 - 24/229 Test #19: test_builder_3 ................... Passed 0.65 sec + 23/229 Test #19: test_builder_3 ................... Passed 0.38 sec Start 39: test_cifspacegroup_8 - 25/229 Test #21: test_builder_5 ................... Passed 0.63 sec + 24/229 Test #21: test_builder_5 ................... Passed 0.52 sec Start 40: test_cifspacegroup_9 - 26/229 Test #23: test_canonconsistent_1 ........... Passed 1.25 sec + 25/229 Test #20: test_builder_4 ................... Passed 0.61 sec Start 41: test_cifspacegroup_10 - 27/229 Test #30: test_carspacegroup_3 ............. Passed 2.14 sec + 26/229 Test #23: test_canonconsistent_1 ........... Passed 1.02 sec Start 42: test_cifspacegroup_11 - 28/229 Test #29: test_carspacegroup_2 ............. Passed 2.32 sec + 27/229 Test #33: test_cifspacegroup_2 ............. Passed 1.62 sec Start 43: test_cifspacegroup_12 - 29/229 Test #31: test_carspacegroup_4 ............. Passed 2.34 sec + 28/229 Test #29: test_carspacegroup_2 ............. Passed 1.87 sec Start 44: test_cifspacegroup_13 - 30/229 Test #32: test_cifspacegroup_1 ............. Passed 2.30 sec + 29/229 Test #30: test_carspacegroup_3 ............. Passed 2.01 sec Start 45: test_cistrans_1 - 31/229 Test #45: test_cistrans_1 .................. Passed 0.04 sec + 30/229 Test #32: test_cifspacegroup_1 ............. Passed 1.99 sec Start 46: test_cistrans_2 - 32/229 Test #46: test_cistrans_2 .................. Passed 0.05 sec + 31/229 Test #45: test_cistrans_1 .................. Passed 0.06 sec Start 47: test_cistrans_3 - 33/229 Test #47: test_cistrans_3 .................. Passed 0.04 sec + 32/229 Test #35: test_cifspacegroup_4 ............. Passed 1.99 sec Start 48: test_cistrans_4 - 34/229 Test #33: test_cifspacegroup_2 ............. Passed 2.43 sec + 33/229 Test #38: test_cifspacegroup_7 ............. Passed 1.89 sec Start 49: test_cistrans_5 - 35/229 Test #35: test_cifspacegroup_4 ............. Passed 2.41 sec + 34/229 Test #46: test_cistrans_2 .................. Passed 0.07 sec Start 50: test_cistrans_6 - 36/229 Test #48: test_cistrans_4 .................. Passed 0.07 sec + 35/229 Test #47: test_cistrans_3 .................. Passed 0.06 sec Start 51: test_cistrans_7 - 37/229 Test #49: test_cistrans_5 .................. Passed 0.07 sec + 36/229 Test #48: test_cistrans_4 .................. Passed 0.06 sec Start 52: test_cistrans_8 - 38/229 Test #36: test_cifspacegroup_5 ............. Passed 2.46 sec + 37/229 Test #49: test_cistrans_5 .................. Passed 0.07 sec Start 53: test_cistrans_9 - 39/229 Test #37: test_cifspacegroup_6 ............. Passed 2.40 sec + 38/229 Test #31: test_carspacegroup_4 ............. Passed 2.16 sec Start 54: test_conversion_1 - 40/229 Test #40: test_cifspacegroup_9 ............. Passed 2.48 sec + 39/229 Test #39: test_cifspacegroup_8 ............. Passed 2.06 sec Start 55: test_graphsym_1 - 41/229 Test #50: test_cistrans_6 .................. Passed 0.30 sec + 40/229 Test #36: test_cifspacegroup_5 ............. Passed 2.19 sec Start 56: test_graphsym_2 - 42/229 Test #38: test_cifspacegroup_7 ............. Passed 2.56 sec + 41/229 Test #50: test_cistrans_6 .................. Passed 0.21 sec Start 57: test_graphsym_3 - 43/229 Test #52: test_cistrans_8 .................. Passed 0.30 sec + 42/229 Test #51: test_cistrans_7 .................. Passed 0.21 sec Start 58: test_graphsym_4 - 44/229 Test #51: test_cistrans_7 .................. Passed 0.34 sec + 43/229 Test #52: test_cistrans_8 .................. Passed 0.21 sec Start 59: test_graphsym_5 - 45/229 Test #53: test_cistrans_9 .................. Passed 0.31 sec + 44/229 Test #37: test_cifspacegroup_6 ............. Passed 2.25 sec Start 60: test_gzip_1 - 46/229 Test #54: test_conversion_1 ................ Passed 0.28 sec + 45/229 Test #44: test_cifspacegroup_13 ............ Passed 0.54 sec Start 61: test_addh_1 - 47/229 Test #39: test_cifspacegroup_8 ............. Passed 2.67 sec + 46/229 Test #41: test_cifspacegroup_10 ............ Passed 1.95 sec Start 62: test_implicitH_1 - 48/229 Test #44: test_cifspacegroup_13 ............ Passed 0.71 sec + 47/229 Test #53: test_cistrans_9 .................. Passed 0.27 sec Start 63: test_lssr_1 - 49/229 Test #56: test_graphsym_2 .................. Passed 0.29 sec + 48/229 Test #54: test_conversion_1 ................ Passed 0.28 sec Start 64: test_lssr_2 - 50/229 Test #55: test_graphsym_1 .................. Passed 0.33 sec + 49/229 Test #56: test_graphsym_2 .................. Passed 0.21 sec Start 65: test_lssr_3 - 51/229 Test #58: test_graphsym_4 .................. Passed 0.28 sec + 50/229 Test #55: test_graphsym_1 .................. Passed 0.24 sec Start 66: test_lssr_4 - 52/229 Test #57: test_graphsym_3 .................. Passed 0.35 sec + 51/229 Test #57: test_graphsym_3 .................. Passed 0.23 sec Start 67: test_lssr_5 - 53/229 Test #59: test_graphsym_5 .................. Passed 0.32 sec + 52/229 Test #59: test_graphsym_5 .................. Passed 0.24 sec Start 68: test_isomorphism_1 - 54/229 Test #62: test_implicitH_1 ................. Passed 0.38 sec + 53/229 Test #58: test_graphsym_4 .................. Passed 0.28 sec Start 69: test_isomorphism_2 - 55/229 Test #41: test_cifspacegroup_10 ............ Passed 2.44 sec + 54/229 Test #62: test_implicitH_1 ................. Passed 0.22 sec Start 70: test_isomorphism_3 - 56/229 Test #68: test_isomorphism_1 ............... Passed 0.30 sec + 55/229 Test #40: test_cifspacegroup_9 ............. Passed 2.33 sec Start 71: test_isomorphism_4 - 57/229 Test #67: test_lssr_5 ...................... Passed 0.34 sec + 56/229 Test #67: test_lssr_5 ...................... Passed 0.27 sec Start 72: test_isomorphism_5 - 58/229 Test #69: test_isomorphism_2 ............... Passed 0.27 sec + 57/229 Test #68: test_isomorphism_1 ............... Passed 0.25 sec Start 73: test_isomorphism_6 - 59/229 Test #70: test_isomorphism_3 ............... Passed 0.28 sec + 58/229 Test #69: test_isomorphism_2 ............... Passed 0.25 sec Start 74: test_isomorphism_7 - 60/229 Test #71: test_isomorphism_4 ............... Passed 0.26 sec + 59/229 Test #70: test_isomorphism_3 ............... Passed 0.24 sec Start 75: test_isomorphism_8 - 61/229 Test #72: test_isomorphism_5 ............... Passed 0.25 sec + 60/229 Test #71: test_isomorphism_4 ............... Passed 0.22 sec Start 76: test_isomorphism_9 - 62/229 Test #73: test_isomorphism_6 ............... Passed 0.26 sec + 61/229 Test #42: test_cifspacegroup_11 ............ Passed 2.11 sec Start 77: test_multicml_1 - 63/229 Test #74: test_isomorphism_7 ............... Passed 0.28 sec + 62/229 Test #72: test_isomorphism_5 ............... Passed 0.22 sec Start 78: test_periodic_1 - 64/229 Test #63: test_lssr_1 ...................... Passed 1.02 sec + 63/229 Test #78: test_periodic_1 .................. Passed 0.03 sec Start 79: test_periodic_2 - 65/229 Test #78: test_periodic_1 .................. Passed 0.06 sec + 64/229 Test #73: test_isomorphism_6 ............... Passed 0.24 sec Start 80: test_periodic_3 - 66/229 Test #75: test_isomorphism_8 ............... Passed 0.28 sec + 65/229 Test #75: test_isomorphism_8 ............... Passed 0.22 sec Start 81: test_periodic_4 - 67/229 Test #76: test_isomorphism_9 ............... Passed 0.28 sec + 66/229 Test #74: test_isomorphism_7 ............... Passed 0.26 sec Start 82: test_regressions_1 - 68/229 Test #79: test_periodic_2 .................. Passed 0.09 sec + 67/229 Test #63: test_lssr_1 ...................... Passed 0.70 sec Start 83: test_regressions_221 - 69/229 Test #81: test_periodic_4 .................. Passed 0.06 sec + 68/229 Test #79: test_periodic_2 .................. Passed 0.09 sec Start 84: test_regressions_222 - 70/229 Test #77: test_multicml_1 .................. Passed 0.29 sec + 69/229 Test #76: test_isomorphism_9 ............... Passed 0.25 sec Start 85: test_regressions_223 - 71/229 Test #80: test_periodic_3 .................. Passed 0.30 sec + 70/229 Test #81: test_periodic_4 .................. Passed 0.10 sec Start 86: test_regressions_224 - 72/229 Test #84: test_regressions_222 ............. Passed 0.30 sec + 71/229 Test #77: test_multicml_1 .................. Passed 0.20 sec Start 87: test_regressions_225 - 73/229 Test #85: test_regressions_223 ............. Passed 0.27 sec + 72/229 Test #80: test_periodic_3 .................. Passed 0.16 sec Start 88: test_regressions_226 - 74/229 Test #42: test_cifspacegroup_11 ............ Passed 2.42 sec + 73/229 Test #82: test_regressions_1 ............... Passed 0.22 sec Start 89: test_regressions_227 - 75/229 Test #83: test_regressions_221 ............. Passed 0.41 sec + 74/229 Test #83: test_regressions_221 ............. Passed 0.22 sec Start 90: test_regressions_228 - 76/229 Test #82: test_regressions_1 ............... Passed 0.46 sec + 75/229 Test #84: test_regressions_222 ............. Passed 0.22 sec Start 91: test_regressions_240 - 77/229 Test #60: test_gzip_1 ...................... Passed 1.65 sec + 76/229 Test #85: test_regressions_223 ............. Passed 0.23 sec Start 92: test_regressions_241 - 78/229 Test #43: test_cifspacegroup_12 ............ Passed 2.46 sec + 77/229 Test #86: test_regressions_224 ............. Passed 0.22 sec Start 93: test_regressions_242 - 79/229 Test #86: test_regressions_224 ............. Passed 0.31 sec + 78/229 Test #87: test_regressions_225 ............. Passed 0.22 sec Start 94: test_regressions_1794 - 80/229 Test #88: test_regressions_226 ............. Passed 0.25 sec + 79/229 Test #88: test_regressions_226 ............. Passed 0.22 sec Start 95: test_regressions_2111 - 81/229 Test #87: test_regressions_225 ............. Passed 0.32 sec + 80/229 Test #60: test_gzip_1 ...................... Passed 1.11 sec Start 96: test_rotor_1 - 82/229 Test #89: test_regressions_227 ............. Passed 0.29 sec + 81/229 Test #43: test_cifspacegroup_12 ............ Passed 1.81 sec Start 97: test_rotor_2 - 83/229 Test #96: test_rotor_1 ..................... Passed 0.05 sec + 82/229 Test #96: test_rotor_1 ..................... Passed 0.04 sec Start 98: test_rotor_3 - 84/229 Test #91: test_regressions_240 ............. Passed 0.26 sec + 83/229 Test #89: test_regressions_227 ............. Passed 0.19 sec Start 99: test_rotor_4 - 85/229 Test #90: test_regressions_228 ............. Passed 0.31 sec + 84/229 Test #90: test_regressions_228 ............. Passed 0.21 sec Start 100: test_shuffle_1 - 86/229 Test #92: test_regressions_241 ............. Passed 0.32 sec + 85/229 Test #91: test_regressions_240 ............. Passed 0.21 sec Start 101: test_shuffle_2 - 87/229 Test #93: test_regressions_242 ............. Passed 0.31 sec + 86/229 Test #92: test_regressions_241 ............. Passed 0.20 sec Start 102: test_shuffle_3 - 88/229 Test #95: test_regressions_2111 ............ Passed 0.27 sec + 87/229 Test #93: test_regressions_242 ............. Passed 0.23 sec Start 103: test_shuffle_4 - 89/229 Test #94: test_regressions_1794 ............ Passed 0.34 sec + 88/229 Test #94: test_regressions_1794 ............ Passed 0.23 sec Start 104: test_shuffle_5 - 90/229 Test #97: test_rotor_2 ..................... Passed 0.26 sec + 89/229 Test #95: test_regressions_2111 ............ Passed 0.23 sec Start 105: test_smiles_1 - 91/229 Test #98: test_rotor_3 ..................... Passed 0.29 sec + 90/229 Test #98: test_rotor_3 ..................... Passed 0.19 sec Start 106: test_smiles_2 - 92/229 Test #99: test_rotor_4 ..................... Passed 0.37 sec + 91/229 Test #97: test_rotor_2 ..................... Passed 0.24 sec Start 107: test_smiles_3 - 93/229 Test #105: test_smiles_1 .................... Passed 0.28 sec + 92/229 Test #99: test_rotor_4 ..................... Passed 0.24 sec Start 108: test_spectrophore_1 - 94/229 Test #106: test_smiles_2 .................... Passed 0.26 sec + 93/229 Test #105: test_smiles_1 .................... Passed 0.18 sec Start 109: test_spectrophore_2 - 95/229 Test #107: test_smiles_3 .................... Passed 0.23 sec + 94/229 Test #106: test_smiles_2 .................... Passed 0.18 sec Start 110: test_spectrophore_3 - 96/229 Test #109: test_spectrophore_2 .............. Passed 0.14 sec + 95/229 Test #103: test_shuffle_4 ................... Passed 0.28 sec Start 111: test_spectrophore_4 - 97/229 Test #103: test_shuffle_4 ................... Passed 0.54 sec + 96/229 Test #107: test_smiles_3 .................... Passed 0.24 sec Start 112: test_spectrophore_5 - 98/229 Test #110: test_spectrophore_3 .............. Passed 0.22 sec + 97/229 Test #109: test_spectrophore_2 .............. Passed 0.13 sec Start 113: test_squareplanar_1 - 99/229 Test #113: test_squareplanar_1 .............. Passed 0.04 sec + 98/229 Test #110: test_spectrophore_3 .............. Passed 0.14 sec Start 114: test_squareplanar_2 -100/229 Test #112: test_spectrophore_5 .............. Passed 0.16 sec + 99/229 Test #113: test_squareplanar_1 .............. Passed 0.05 sec Start 115: test_squareplanar_3 -101/229 Test #114: test_squareplanar_2 .............. Passed 0.05 sec +100/229 Test #111: test_spectrophore_4 .............. Passed 0.13 sec Start 116: test_squareplanar_4 -102/229 Test #115: test_squareplanar_3 .............. Passed 0.06 sec +101/229 Test #114: test_squareplanar_2 .............. Passed 0.04 sec Start 117: test_squareplanar_5 -103/229 Test #102: test_shuffle_3 ................... Passed 0.85 sec +102/229 Test #115: test_squareplanar_3 .............. Passed 0.04 sec Start 118: test_stereo_1 -104/229 Test #111: test_spectrophore_4 .............. Passed 0.32 sec +103/229 Test #116: test_squareplanar_4 .............. Passed 0.04 sec Start 119: test_stereo_2 -105/229 Test #117: test_squareplanar_5 .............. Passed 0.08 sec +104/229 Test #112: test_spectrophore_5 .............. Passed 0.14 sec Start 120: test_stereo_3 -106/229 Test #116: test_squareplanar_4 .............. Passed 0.15 sec +105/229 Test #117: test_squareplanar_5 .............. Passed 0.06 sec Start 121: test_stereo_4 -107/229 Test #118: test_stereo_1 .................... Passed 0.12 sec +106/229 Test #118: test_stereo_1 .................... Passed 0.05 sec Start 122: test_stereo_5 -108/229 Test #119: test_stereo_2 .................... Passed 0.10 sec +107/229 Test #119: test_stereo_2 .................... Passed 0.05 sec Start 123: test_stereo_6 -109/229 Test #120: test_stereo_3 .................... Passed 0.10 sec +108/229 Test #120: test_stereo_3 .................... Passed 0.06 sec Start 124: test_stereoperception_1 -110/229 Test #121: test_stereo_4 .................... Passed 0.08 sec +109/229 Test #102: test_shuffle_3 ................... Passed 0.59 sec Start 125: test_stereoperception_2 -111/229 Test #104: test_shuffle_5 ................... Passed 0.97 sec +110/229 Test #121: test_stereo_4 .................... Passed 0.08 sec Start 126: test_stereoperception_3 -112/229 Test #122: test_stereo_5 .................... Passed 0.10 sec +111/229 Test #122: test_stereo_5 .................... Passed 0.08 sec Start 127: test_stereoperception_4 -113/229 Test #125: test_stereoperception_2 .......... Passed 0.25 sec +112/229 Test #104: test_shuffle_5 ................... Passed 0.66 sec Start 128: test_tautomer_1 -114/229 Test #126: test_stereoperception_3 .......... Passed 0.27 sec +113/229 Test #124: test_stereoperception_1 .......... Passed 0.18 sec Start 129: test_tautomer_2 -115/229 Test #124: test_stereoperception_1 .......... Passed 0.34 sec +114/229 Test #125: test_stereoperception_2 .......... Passed 0.19 sec Start 130: test_tautomer_3 -116/229 Test #127: test_stereoperception_4 .......... Passed 0.29 sec +115/229 Test #126: test_stereoperception_3 .......... Passed 0.20 sec Start 131: test_tautomer_4 -117/229 Test #100: test_shuffle_1 ................... Passed 1.59 sec +116/229 Test #127: test_stereoperception_4 .......... Passed 0.20 sec Start 132: test_tautomer_5 -118/229 Test #132: test_tautomer_5 .................. Passed 0.12 sec +117/229 Test #128: test_tautomer_1 .................. Passed 0.18 sec Start 133: test_tautomer_6 -119/229 Test #131: test_tautomer_4 .................. Passed 0.30 sec +118/229 Test #131: test_tautomer_4 .................. Passed 0.16 sec Start 134: test_tautomer_7 -120/229 Test #128: test_tautomer_1 .................. Passed 0.42 sec +119/229 Test #129: test_tautomer_2 .................. Passed 0.24 sec Start 135: test_tautomer_8 -121/229 Test #129: test_tautomer_2 .................. Passed 0.39 sec +120/229 Test #132: test_tautomer_5 .................. Passed 0.20 sec Start 136: test_tautomer_9 -122/229 Test #135: test_tautomer_8 .................. Passed 0.18 sec +121/229 Test #133: test_tautomer_6 .................. Passed 0.18 sec Start 137: test_tautomer_10 -123/229 Test #136: test_tautomer_9 .................. Passed 0.20 sec +122/229 Test #134: test_tautomer_7 .................. Passed 0.18 sec Start 138: test_tautomer_11 -124/229 Test #133: test_tautomer_6 .................. Passed 0.35 sec +123/229 Test #135: test_tautomer_8 .................. Passed 0.17 sec Start 139: test_tautomer_12 -125/229 Test #123: test_stereo_6 .................... Passed 1.02 sec +124/229 Test #136: test_tautomer_9 .................. Passed 0.17 sec Start 140: test_tautomer_13 -126/229 Test #130: test_tautomer_3 .................. Passed 0.70 sec +125/229 Test #130: test_tautomer_3 .................. Passed 0.45 sec Start 141: test_tautomer_14 -127/229 Test #134: test_tautomer_7 .................. Passed 0.41 sec +126/229 Test #137: test_tautomer_10 ................. Passed 0.18 sec Start 142: test_tautomer_15 -128/229 Test #137: test_tautomer_10 ................. Passed 0.24 sec +127/229 Test #123: test_stereo_6 .................... Passed 0.73 sec Start 143: test_tautomer_16 -129/229 Test #138: test_tautomer_11 ................. Passed 0.26 sec +128/229 Test #138: test_tautomer_11 ................. Passed 0.18 sec Start 144: test_tautomer_17 -130/229 Test #140: test_tautomer_13 ................. Passed 0.19 sec +129/229 Test #139: test_tautomer_12 ................. Passed 0.18 sec Start 145: test_tautomer_18 -131/229 Test #139: test_tautomer_12 ................. Passed 0.27 sec +130/229 Test #140: test_tautomer_13 ................. Passed 0.18 sec Start 146: test_tautomer_19 -132/229 Test #141: test_tautomer_14 ................. Passed 0.22 sec +131/229 Test #141: test_tautomer_14 ................. Passed 0.19 sec Start 147: test_tautomer_20 -133/229 Test #144: test_tautomer_17 ................. Passed 0.11 sec +132/229 Test #142: test_tautomer_15 ................. Passed 0.19 sec Start 148: test_tautomer_21 -134/229 Test #147: test_tautomer_20 ................. Passed 0.14 sec +133/229 Test #143: test_tautomer_16 ................. Passed 0.18 sec Start 149: test_tautomer_22 -135/229 Test #142: test_tautomer_15 ................. Passed 0.34 sec +134/229 Test #100: test_shuffle_1 ................... Passed 1.53 sec Start 150: test_tautomer_23 -136/229 Test #146: test_tautomer_19 ................. Passed 0.19 sec +135/229 Test #144: test_tautomer_17 ................. Passed 0.19 sec Start 151: test_tautomer_24 -137/229 Test #101: test_shuffle_2 ................... Passed 2.51 sec +136/229 Test #145: test_tautomer_18 ................. Passed 0.19 sec Start 152: test_tautomer_25 -138/229 Test #148: test_tautomer_21 ................. Passed 0.22 sec +137/229 Test #146: test_tautomer_19 ................. Passed 0.19 sec Start 153: test_tautomer_26 -139/229 Test #149: test_tautomer_22 .................Child aborted***Exception: 0.11 sec +138/229 Test #147: test_tautomer_20 ................. Passed 0.18 sec + Start 154: test_tautomer_27 +139/229 Test #149: test_tautomer_22 .................Child aborted***Exception: 0.17 sec test_runner: /build/openbabel-3.1.1+dfsg/src/tautomer.cpp:233: void OpenBabel::TautomerImpl::PropagationRAII::assignDonor(OpenBabel::OBAtom*): Assertion `m_hydrogenCounter >= 1' failed. - Start 154: test_tautomer_27 -140/229 Test #145: test_tautomer_18 ................. Passed 0.32 sec Start 155: test_tautomer_28 -141/229 Test #143: test_tautomer_16 ................. Passed 0.41 sec +140/229 Test #101: test_shuffle_2 ................... Passed 1.66 sec Start 156: test_tetrahedral_1 -142/229 Test #108: test_spectrophore_1 .............. Passed 2.17 sec +141/229 Test #148: test_tautomer_21 ................. Passed 0.22 sec Start 157: test_tetrahedral_2 -143/229 Test #156: test_tetrahedral_1 ............... Passed 0.04 sec +142/229 Test #156: test_tetrahedral_1 ............... Passed 0.03 sec Start 158: test_tetrahedral_3 -144/229 Test #157: test_tetrahedral_2 ............... Passed 0.05 sec +143/229 Test #157: test_tetrahedral_2 ............... Passed 0.03 sec Start 159: test_tetrahedral_4 -145/229 Test #158: test_tetrahedral_3 ............... Passed 0.06 sec +144/229 Test #152: test_tautomer_25 ................. Passed 0.17 sec Start 160: test_tetrahedral_5 -146/229 Test #159: test_tetrahedral_4 ............... Passed 0.05 sec +145/229 Test #158: test_tetrahedral_3 ............... Passed 0.05 sec Start 161: test_tetranonplanar_1 -147/229 Test #161: test_tetranonplanar_1 ............ Passed 0.06 sec +146/229 Test #159: test_tetrahedral_4 ............... Passed 0.05 sec Start 162: test_tetraplanar_1 -148/229 Test #152: test_tautomer_25 ................. Passed 0.23 sec +147/229 Test #151: test_tautomer_24 ................. Passed 0.24 sec Start 163: test_uniqueid_1 -149/229 Test #160: test_tetrahedral_5 ............... Passed 0.12 sec +148/229 Test #160: test_tetrahedral_5 ............... Passed 0.07 sec Start 164: test_uniqueid_2 -150/229 Test #162: test_tetraplanar_1 ............... Passed 0.06 sec +149/229 Test #153: test_tautomer_26 ................. Passed 0.25 sec Start 165: test_maereader_1 -151/229 Test #65: test_lssr_3 ...................... Passed 4.55 sec - Start 166: test_maereader_2 -152/229 Test #155: test_tautomer_28 ................. Passed 0.26 sec - Start 167: test_aromatest_1 -153/229 Test #154: test_tautomer_27 .................Child aborted***Exception: 0.28 sec +150/229 Test #154: test_tautomer_27 .................Child aborted***Exception: 0.22 sec test_runner: /build/openbabel-3.1.1+dfsg/src/tautomer.cpp:233: void OpenBabel::TautomerImpl::PropagationRAII::assignDonor(OpenBabel::OBAtom*): Assertion `m_hydrogenCounter >= 1' failed. + Start 166: test_maereader_2 +151/229 Test #161: test_tetranonplanar_1 ............ Passed 0.10 sec + Start 167: test_aromatest_1 +152/229 Test #150: test_tautomer_23 ................. Passed 0.35 sec Start 168: test_atom_1 -154/229 Test #153: test_tautomer_26 ................. Passed 0.31 sec +153/229 Test #162: test_tetraplanar_1 ............... Passed 0.12 sec Start 169: test_atom_2 -155/229 Test #163: test_uniqueid_1 .................. Passed 0.10 sec +154/229 Test #163: test_uniqueid_1 .................. Passed 0.12 sec Start 170: test_atom_3 -156/229 Test #164: test_uniqueid_2 .................. Passed 0.10 sec +155/229 Test #155: test_tautomer_28 ................. Passed 0.27 sec Start 171: test_atom_4 -157/229 Test #150: test_tautomer_23 ................. Passed 0.49 sec +156/229 Test #164: test_uniqueid_2 .................. Passed 0.13 sec Start 172: test_bond_1 -158/229 Test #151: test_tautomer_24 ................. Passed 0.49 sec +157/229 Test #168: test_atom_1 ...................... Passed 0.08 sec Start 173: test_cansmi_1 -159/229 Test #168: test_atom_1 ...................... Passed 0.16 sec +158/229 Test #169: test_atom_2 ...................... Passed 0.08 sec Start 174: test_charge_mmff94_1 -160/229 Test #169: test_atom_2 ...................... Passed 0.16 sec +159/229 Test #170: test_atom_3 ...................... Passed 0.08 sec Start 175: test_charge_gasteiger_1 -161/229 Test #166: test_maereader_2 ................. Passed 0.22 sec +160/229 Test #171: test_atom_4 ...................... Passed 0.08 sec Start 176: test_datatest_1 -162/229 Test #167: test_aromatest_1 ................. Passed 0.23 sec +161/229 Test #172: test_bond_1 ...................... Passed 0.08 sec Start 177: test_ffgaff_1 -163/229 Test #170: test_atom_3 ...................... Passed 0.22 sec +162/229 Test #165: test_maereader_1 ................. Passed 0.22 sec Start 178: test_ffghemical_1 -164/229 Test #171: test_atom_4 ...................... Passed 0.22 sec +163/229 Test #166: test_maereader_2 ................. Passed 0.22 sec Start 179: test_ffmmff94_1 -165/229 Test #172: test_bond_1 ...................... Passed 0.19 sec +164/229 Test #167: test_aromatest_1 ................. Passed 0.22 sec Start 180: test_ffmmff94_2 -166/229 Test #165: test_maereader_1 ................. Passed 0.36 sec +165/229 Test #176: test_datatest_1 .................. Passed 0.09 sec Start 181: test_ffmmff94_3 -167/229 Test #176: test_datatest_1 .................. Passed 0.15 sec +166/229 Test #108: test_spectrophore_1 .............. Passed 2.10 sec Start 182: test_ffmmff94_4 -168/229 Test #175: test_charge_gasteiger_1 .......... Passed 0.75 sec +167/229 Test #175: test_charge_gasteiger_1 .......... Passed 0.41 sec Start 183: test_ffmmff94_5 -169/229 Test #174: test_charge_mmff94_1 ............. Passed 1.52 sec +168/229 Test #174: test_charge_mmff94_1 ............. Passed 1.14 sec Start 184: test_ffmmff94_6 -170/229 Test #184: test_ffmmff94_6 .................. Passed 0.07 sec +169/229 Test #184: test_ffmmff94_6 .................. Passed 0.07 sec Start 185: test_ffuff_1 -171/229 Test #66: test_lssr_4 ...................... Passed 7.18 sec +170/229 Test #65: test_lssr_3 ...................... Passed 4.40 sec Start 186: test_formalcharge_1 -172/229 Test #186: test_formalcharge_1 .............. Passed 0.69 sec +171/229 Test #186: test_formalcharge_1 .............. Passed 0.48 sec Start 187: test_format_1 -173/229 Test #173: test_cansmi_1 .................... Passed 3.73 sec +172/229 Test #187: test_format_1 .................... Passed 0.34 sec Start 188: test_formula_1 -174/229 Test #187: test_format_1 .................... Passed 0.57 sec +173/229 Test #66: test_lssr_4 ...................... Passed 5.60 sec Start 189: test_internalcoord_1 -175/229 Test #189: test_internalcoord_1 ............. Passed 0.06 sec +174/229 Test #189: test_internalcoord_1 ............. Passed 0.06 sec Start 190: test_invalidsmarts_1 -176/229 Test #190: test_invalidsmarts_1 ............. Passed 0.14 sec +175/229 Test #190: test_invalidsmarts_1 ............. Passed 0.08 sec Start 191: test_invalidsmiles_1 -177/229 Test #191: test_invalidsmiles_1 ............. Passed 0.04 sec +176/229 Test #191: test_invalidsmiles_1 ............. Passed 0.05 sec Start 192: test_iterators_1 -178/229 Test #188: test_formula_1 ................... Passed 0.45 sec +177/229 Test #188: test_formula_1 ................... Passed 0.63 sec Start 193: test_logp_psa_1 -179/229 Test #192: test_iterators_1 ................. Passed 0.46 sec +178/229 Test #173: test_cansmi_1 .................... Passed 3.17 sec Start 194: test_math_1 -180/229 Test #193: test_logp_psa_1 .................. Passed 0.94 sec +179/229 Test #193: test_logp_psa_1 .................. Passed 0.37 sec Start 195: test_math_2 -181/229 Test #194: test_math_1 ...................... Passed 0.75 sec +180/229 Test #192: test_iterators_1 ................. Passed 0.90 sec Start 196: test_math_3 -182/229 Test #196: test_math_3 ...................... Passed 0.27 sec +181/229 Test #195: test_math_2 ...................... Passed 0.53 sec Start 197: test_math_4 -183/229 Test #195: test_math_2 ...................... Passed 0.55 sec +182/229 Test #194: test_math_1 ...................... Passed 0.59 sec Start 198: test_mol_1 -184/229 Test #197: test_math_4 ...................... Passed 0.51 sec +183/229 Test #196: test_math_3 ...................... Passed 0.12 sec Start 199: test_pdbreadfile_1 -185/229 Test #198: test_mol_1 ....................... Passed 0.89 sec +184/229 Test #197: test_math_4 ...................... Passed 0.22 sec Start 200: test_pdbreadfile_2 -186/229 Test #199: test_pdbreadfile_1 ............... Passed 0.66 sec +185/229 Test #198: test_mol_1 ....................... Passed 0.43 sec Start 201: test_pdbreadfile_3 -187/229 Test #201: test_pdbreadfile_3 ............... Passed 0.62 sec +186/229 Test #199: test_pdbreadfile_1 ............... Passed 0.42 sec Start 202: test_pdbreadfile_4 -188/229 Test #200: test_pdbreadfile_2 ............... Passed 0.74 sec +187/229 Test #200: test_pdbreadfile_2 ............... Passed 0.46 sec Start 203: test_phmodel_1 -189/229 Test #202: test_pdbreadfile_4 ............... Passed 0.58 sec +188/229 Test #201: test_pdbreadfile_3 ............... Passed 0.40 sec Start 204: test_residue_1 -190/229 Test #203: test_phmodel_1 ................... Passed 0.82 sec +189/229 Test #202: test_pdbreadfile_4 ............... Passed 0.42 sec Start 205: test_ringtest_1 -191/229 Test #204: test_residue_1 ................... Passed 0.85 sec +190/229 Test #203: test_phmodel_1 ................... Passed 0.49 sec Start 206: test_smartstest_1 -192/229 Test #205: test_ringtest_1 .................. Passed 1.22 sec +191/229 Test #204: test_residue_1 ................... Passed 0.41 sec Start 207: test_smartsparse_1 -193/229 Test #207: test_smartsparse_1 ............... Passed 0.20 sec +192/229 Test #207: test_smartsparse_1 ............... Passed 0.07 sec Start 208: test_smilesmatch_1 -194/229 Test #185: test_ffuff_1 ..................... Passed 9.16 sec +193/229 Test #205: test_ringtest_1 .................. Passed 0.64 sec Start 209: test_unitcell_1 -195/229 Test #209: test_unitcell_1 .................. Passed 0.08 sec +194/229 Test #209: test_unitcell_1 .................. Passed 0.07 sec Start 210: test_cmlreadfile_1 -196/229 Test #177: test_ffgaff_1 .................... Passed 11.46 sec +195/229 Test #210: test_cmlreadfile_1 ............... Passed 0.41 sec Start 211: inchiSamples.sdf_Test -197/229 Test #210: test_cmlreadfile_1 ............... Passed 0.89 sec +196/229 Test #206: test_smartstest_1 ................ Passed 1.30 sec Start 212: inchiSamplesTechMan.sdf_Test -198/229 Test #206: test_smartstest_1 ................ Passed 3.17 sec +197/229 Test #212: inchiSamplesTechMan.sdf_Test ..... Passed 0.81 sec Start 213: inchiSteffen_PubChem.smi_Test -199/229 Test #213: inchiSteffen_PubChem.smi_Test .... Passed 0.75 sec +198/229 Test #211: inchiSamples.sdf_Test ............ Passed 1.48 sec Start 214: pytest_babel -200/229 Test #212: inchiSamplesTechMan.sdf_Test ..... Passed 1.61 sec +199/229 Test #213: inchiSteffen_PubChem.smi_Test .... Passed 0.69 sec Start 215: pytest_sym -201/229 Test #211: inchiSamples.sdf_Test ............ Passed 3.52 sec +200/229 Test #185: test_ffuff_1 ..................... Passed 6.60 sec Start 216: pytest_smartssym -202/229 Test #208: test_smilesmatch_1 ............... Passed 6.98 sec +201/229 Test #177: test_ffgaff_1 .................... Passed 8.21 sec Start 217: pytest_fastsearch -203/229 Test #178: test_ffghemical_1 ................ Passed 16.75 sec +202/229 Test #208: test_smilesmatch_1 ............... Passed 4.20 sec Start 218: pytest_distgeom -204/229 Test #217: pytest_fastsearch ................ Passed 2.21 sec +203/229 Test #178: test_ffghemical_1 ................ Passed 9.66 sec Start 219: pytest_unique -205/229 Test #219: pytest_unique .................... Passed 4.17 sec +204/229 Test #217: pytest_fastsearch ................ Passed 2.00 sec Start 220: pytest_kekule -206/229 Test #64: test_lssr_2 ...................... Passed 32.72 sec +205/229 Test #219: pytest_unique .................... Passed 4.72 sec Start 221: pytest_pdbformat -207/229 Test #221: pytest_pdbformat ................. Passed 0.97 sec +206/229 Test #221: pytest_pdbformat ................. Passed 1.10 sec Start 222: pytest_RInChI -208/229 Test #220: pytest_kekule .................... Passed 6.62 sec +207/229 Test #64: test_lssr_2 ...................... Passed 20.32 sec Start 223: pybindtest_bindings -209/229 Test #216: pytest_smartssym ................. Passed 16.25 sec +208/229 Test #220: pytest_kekule .................... Passed 8.55 sec Start 224: pybindtest__pybel -210/229 Test #223: pybindtest_bindings .............. Passed 8.54 sec +209/229 Test #223: pybindtest_bindings .............. Passed 5.15 sec Start 225: pybindtest_example -211/229 Test #225: pybindtest_example ............... Passed 2.15 sec +210/229 Test #225: pybindtest_example ............... Passed 1.43 sec Start 226: pybindtest_obconv_writers -212/229 Test #226: pybindtest_obconv_writers ........ Passed 4.24 sec +211/229 Test #216: pytest_smartssym ................. Passed 16.29 sec Start 227: pybindtest_cdjsonformat -213/229 Test #227: pybindtest_cdjsonformat .......... Passed 2.46 sec +212/229 Test #227: pybindtest_cdjsonformat .......... Passed 1.58 sec Start 228: pybindtest_pcjsonformat -214/229 Test #228: pybindtest_pcjsonformat .......... Passed 2.72 sec +213/229 Test #226: pybindtest_obconv_writers ........ Passed 2.74 sec Start 229: pybindtest_roundtrip -215/229 Test #222: pytest_RInChI .................... Passed 27.54 sec -216/229 Test #214: pytest_babel ..................... Passed 75.55 sec -217/229 Test #27: test_canonstable_1 ............... Passed 111.03 sec -218/229 Test #61: test_addh_1 ...................... Passed 138.12 sec -219/229 Test #182: test_ffmmff94_4 .................. Passed 1055.74 sec -220/229 Test #180: test_ffmmff94_2 .................. Passed 1060.09 sec -221/229 Test #17: test_builder_1 ...................***Timeout 1500.20 sec +214/229 Test #228: pybindtest_pcjsonformat .......... Passed 1.88 sec +215/229 Test #222: pytest_RInChI .................... Passed 18.22 sec +216/229 Test #214: pytest_babel ..................... Passed 60.50 sec +217/229 Test #27: test_canonstable_1 ............... Passed 82.78 sec +218/229 Test #61: test_addh_1 ...................... Passed 82.50 sec +219/229 Test #180: test_ffmmff94_2 .................. Passed 946.89 sec +220/229 Test #182: test_ffmmff94_4 .................. Passed 949.89 sec +221/229 Test #17: test_builder_1 ...................***Timeout 1500.18 sec Starting forcefield.sdf /Volumes/Home/ghutchis/Desktop/UFF/CCCN.gpr -222/229 Test #18: test_builder_2 ...................***Timeout 1500.19 sec +222/229 Test #18: test_builder_2 ...................***Timeout 1500.18 sec Starting filterset.sdf 56 137 -223/229 Test #179: test_ffmmff94_1 ..................***Timeout 1499.99 sec +223/229 Test #179: test_ffmmff94_1 ..................***Timeout 1500.13 sec # Testing MMFF94 Force Field... ok 1 # energy ---------------------------------------------------------------------------------------- @@ -6687,7 +6722,7 @@ angle ( 2.902, 2.092, -7.874) ( 2.904, 2.094, -7.872) ( 0.05, 0.09, 0.03) strbnd ( -1.490, -4.290, 5.538) ( -1.491, -4.290, 5.537) ( 0.03, 0.02, 0.02) torsion ( 1.310, 0.148, 0.500) ( 1.310, 0.148, 0.500) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.133, 6.426, -2.475) ( -1.133, 6.427, -2.475) ( 0.00, 0.00, 0.00) electro ( 0.161, -0.154, -0.314) ( 0.161, -0.154, -0.314) ( 0.00, 0.00, 0.00) 10 ( 0.385, -1.062, -0.159) ( 0.412, -1.037, -0.241) ( 1.03, 2.28, 1.31) @@ -6815,23 +6850,23 @@ angle ( -1.034, 6.306, -1.664) ( -1.034, 6.306, -1.664) ( 0.04, 0.01, 0.01) strbnd ( -0.562, 0.219, 0.095) ( -0.562, 0.219, 0.095) ( 0.00, 0.00, 0.00) torsion ( -0.037, -1.134, 0.433) ( -0.037, -1.134, 0.433) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.429, -5.077, 1.574) ( 1.429, -5.077, 1.574) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -0.284, -0.046, -0.073) ( -0.283, -0.045, -0.071) ( 0.02, 0.01, 0.02) bond ( -0.628, 1.336, 2.092) ( -0.627, 1.337, 2.095) ( 0.01, 0.07, 0.11) angle ( -0.745, -7.579, 4.614) ( -0.744, -7.579, 4.614) ( 0.03, 0.01, 0.00) strbnd ( -0.133, -0.439, 0.449) ( -0.133, -0.439, 0.449) ( 0.00, 0.00, 0.00) torsion ( -0.063, 0.000, -0.019) ( -0.063, 0.000, -0.019) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.284, 6.636, -7.210) ( 1.284, 6.636, -7.210) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 27 ( -0.055, 0.024, 0.090) ( -0.053, 0.026, 0.091) ( 0.01, 0.00, 0.01) bond ( 0.526, -0.388, 0.144) ( 0.528, -0.387, 0.144) ( 0.11, 0.04, 0.00) angle ( 0.050, -0.042, -0.294) ( 0.050, -0.042, -0.294) ( 0.00, 0.00, 0.02) strbnd ( -0.519, -0.146, 0.412) ( -0.519, -0.147, 0.412) ( 0.00, 0.00, 0.00) torsion ( 0.024, 0.049, 0.043) ( 0.024, 0.049, 0.043) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.136, 0.552, -0.214) ( -0.136, 0.552, -0.214) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( 0.017, -0.066, -0.165) ( 0.019, -0.065, -0.164) ( 0.00, 0.01, 0.01) @@ -6839,9 +6874,9 @@ angle ( 0.508, -0.622, -0.082) ( 0.508, -0.622, -0.081) ( 0.01, 0.02, 0.00) strbnd ( 0.062, -0.250, 0.582) ( 0.062, -0.250, 0.582) ( 0.00, 0.00, 0.00) torsion ( 0.032, -0.035, -0.016) ( 0.032, -0.035, -0.016) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.032, 1.319, -0.446) ( 0.032, 1.319, -0.446) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 29 ( -0.042, 0.017, 0.205) ( -0.040, 0.019, 0.206) ( 0.01, 0.00, 0.03) bond ( 0.190, -0.138, 0.157) ( 0.192, -0.137, 0.158) ( 0.03, 0.01, 0.02) angle ( -1.278, -5.641, -3.328) ( -1.277, -5.640, -3.328) ( 0.02, 0.01, 0.01) @@ -6849,13 +6884,13 @@ torsion ( -0.378, 0.160, 0.596) ( -0.378, 0.160, 0.596) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.482, 6.333, 2.621) ( 1.482, 6.333, 2.621) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 30 ( 0.055, -0.028, 0.141) ( 0.056, -0.027, 0.144) ( 0.01, 0.00, 0.03) bond ( -0.443, -0.386, 0.756) ( -0.442, -0.386, 0.759) ( 0.03, 0.02, 0.16) angle ( -0.262, -0.474, -0.393) ( -0.261, -0.474, -0.393) ( 0.01, 0.02, 0.01) strbnd ( -0.413, -0.294, -0.338) ( -0.413, -0.294, -0.338) ( 0.00, 0.00, 0.00) torsion ( 0.017, -0.020, -0.001) ( 0.017, -0.020, -0.001) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.156, 1.146, 0.117) ( 1.156, 1.146, 0.117) ( 0.00, 0.00, 0.00) electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 31 ( -0.052, 0.041, 0.085) ( -0.051, 0.043, 0.086) ( 0.01, 0.01, 0.01) @@ -6863,15 +6898,15 @@ angle ( -4.788, 0.065, -2.987) ( -4.788, 0.065, -2.987) ( 0.01, 0.00, 0.01) strbnd ( -0.780, 0.245, 0.269) ( -0.780, 0.245, 0.269) ( 0.00, 0.00, 0.00) torsion ( 0.095, -0.413, 0.587) ( 0.095, -0.413, 0.587) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.954, 1.137, 2.990) ( 4.954, 1.137, 2.990) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 32 ( 0.029, -0.014, -0.100) ( 0.031, -0.012, -0.100) ( 0.01, 0.00, 0.01) bond ( 0.990, 1.125, 0.207) ( 0.992, 1.126, 0.207) ( 0.14, 0.17, 0.00) angle ( 3.214, -2.731, -0.541) ( 3.214, -2.730, -0.540) ( 0.01, 0.01, 0.02) strbnd ( 0.051, -0.498, -0.006) ( 0.050, -0.498, -0.006) ( 0.00, 0.00, 0.00) torsion ( -0.050, -0.015, 0.320) ( -0.050, -0.015, 0.320) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -4.176, 2.106, -0.080) ( -4.176, 2.106, -0.080) ( 0.00, 0.00, 0.00) electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 33 ( 0.011, 0.007, -0.103) ( 0.012, 0.009, -0.100) ( 0.00, 0.00, 0.02) @@ -6881,13 +6916,13 @@ torsion ( -0.286, -0.647, 0.304) ( -0.286, -0.647, 0.304) ( 0.00, 0.00, 0.00) oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.131, -0.007, 0.292) ( -3.131, -0.007, 0.292) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 34 ( 0.075, -0.007, -0.103) ( 0.076, -0.006, -0.101) ( 0.00, 0.00, 0.02) bond ( 0.035, -0.551, 0.735) ( 0.035, -0.550, 0.737) ( 0.00, 0.07, 0.16) angle ( 1.556, 0.759, 0.492) ( 1.556, 0.759, 0.493) ( 0.03, 0.02, 0.01) strbnd ( 0.359, -0.089, -0.017) ( 0.359, -0.089, -0.017) ( 0.00, 0.00, 0.00) torsion ( -0.120, -0.433, -0.317) ( -0.120, -0.433, -0.317) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.755, 0.308, -0.996) ( -1.755, 0.308, -0.996) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 35 ( 1.750, -1.226, 0.260) ( 1.752, -1.223, 0.261) ( 0.10, 0.24, 0.04) @@ -6953,8 +6988,8 @@ strbnd ( -2.009, -0.344, -0.542) ( -2.010, -0.344, -0.542) ( 0.03, 0.02, 0.00) torsion ( 0.001, 0.000, -0.005) ( 0.001, 0.000, -0.004) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.000, -0.001) ( 0.000, 0.000, -0.001) ( 0.00, 0.00, 0.00) - vdw ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 3 ( 0.063, 0.140, 0.024) ( 0.065, 0.142, 0.025) ( 0.01, 0.04, 0.00) bond ( 1.119, 1.704, 0.350) ( 1.120, 1.706, 0.350) ( 0.10, 0.15, 0.00) angle ( 1.146, -0.809, 0.277) ( 1.146, -0.809, 0.277) ( 0.03, 0.02, 0.00) @@ -6990,9 +7025,9 @@ 7 ( -0.447, -0.202, -0.130) ( -0.443, -0.195, -0.129) ( 0.18, 0.16, 0.01) bond ( 0.245, 0.341, 0.076) ( 0.249, 0.348, 0.077) ( 0.10, 0.26, 0.00) angle ( -0.389, 0.299, -0.100) ( -0.389, 0.299, -0.099) ( 0.01, 0.00, 0.00) - strbnd ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + strbnd ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.646, 0.581, 0.189) ( 0.646, 0.581, 0.189) ( 0.00, 0.00, 0.00) electro ( -0.949, -1.423, -0.296) ( -0.949, -1.423, -0.296) ( 0.00, 0.00, 0.00) ok 4 # gradients @@ -7065,7 +7100,7 @@ angle ( 1.567, -0.533, 0.815) ( 1.568, -0.532, 0.815) ( 0.03, 0.02, 0.01) strbnd ( 0.370, -0.276, -0.582) ( 0.370, -0.276, -0.582) ( 0.00, 0.00, 0.00) torsion ( -0.016, 0.130, -0.075) ( -0.016, 0.130, -0.075) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.992, 0.775, 0.081) ( -1.992, 0.775, 0.081) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 9 ( 0.179, -0.202, 0.342) ( 0.180, -0.201, 0.344) ( 0.02, 0.02, 0.08) @@ -7090,7 +7125,7 @@ angle ( 1.859, -4.639, 2.751) ( 1.861, -4.637, 2.752) ( 0.10, 0.04, 0.06) strbnd ( 0.352, -0.450, 0.642) ( 0.351, -0.450, 0.641) ( 0.05, 0.03, 0.04) torsion ( -0.296, -0.439, 0.009) ( -0.296, -0.439, 0.009) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.689, 2.322, 0.608) ( 5.689, 2.322, 0.608) ( 0.00, 0.00, 0.00) electro ( -2.279, 0.731, -1.001) ( -2.279, 0.731, -1.001) ( 0.00, 0.00, 0.00) 2 ( -0.776, -0.622, -0.218) ( -0.780, -0.606, -0.189) ( 0.23, 0.97, 0.62) @@ -7122,7 +7157,7 @@ angle ( -1.188, -0.996, 0.154) ( -1.187, -0.996, 0.154) ( 0.05, 0.05, 0.00) strbnd ( -0.441, 0.249, -0.473) ( -0.441, 0.249, -0.473) ( 0.00, 0.00, 0.00) torsion ( 0.429, 0.568, -0.091) ( 0.429, 0.568, -0.091) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.975, 0.076, 0.758) ( 0.975, 0.076, 0.758) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 6 ( 0.815, 1.141, -0.215) ( 0.856, 1.101, -0.316) ( 3.35, 3.49, 2.17) @@ -7170,7 +7205,7 @@ bond (-13.151, 0.001, 0.002) (-13.148, 0.005, 0.006) ( 0.03, 0.00, 0.00) angle ( -5.431, -2.186, 3.739) ( -5.429, -2.184, 3.741) ( 0.03, 0.08, 0.04) strbnd ( 4.098, -2.031, 3.530) ( 4.097, -2.031, 3.529) ( 0.04, 0.02, 0.01) - torsion ( 0.000, 0.166, -0.285) ( 0.000, 0.166, -0.285) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.166, -0.285) ( 0.000, 0.166, -0.285) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.551, 1.346, -2.346) ( 4.551, 1.346, -2.346) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -7194,7 +7229,7 @@ bond ( -9.351, 26.406, -0.000) ( -9.351, 26.409, 0.000) ( 0.00, 0.01, 0.00) angle ( 1.760, 0.623, -0.007) ( 1.760, 0.623, -0.006) ( 0.03, 0.00, 0.00) strbnd ( -1.908, -0.349, 0.000) ( -1.908, -0.349, 0.000) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, 0.152) ( 0.000, 0.000, 0.152) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, 0.152) ( 0.000, 0.000, 0.152) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.187, 1.385, -0.040) ( 7.187, 1.385, -0.040) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -7202,7 +7237,7 @@ bond ( -9.334, -13.210, 22.872) ( -9.334, -13.209, 22.874) ( 0.00, 0.01, 0.01) angle ( 1.828, -0.303, 0.571) ( 1.829, -0.302, 0.572) ( 0.02, 0.01, 0.01) strbnd ( -1.910, 0.171, -0.295) ( -1.910, 0.171, -0.295) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.183, 0.066, -0.115) ( 0.183, 0.066, -0.115) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -7210,15 +7245,15 @@ bond ( -9.329, -13.205, -22.882) ( -9.329, -13.205, -22.880) ( 0.00, 0.01, 0.01) angle ( 1.840, -0.299, -0.578) ( 1.840, -0.299, -0.578) ( 0.02, 0.01, 0.01) strbnd ( -1.909, 0.172, 0.297) ( -1.909, 0.172, 0.297) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.133, 0.077) ( 0.000, -0.133, 0.077) ( 0.00, 0.00, 0.00) + torsion ( 0.000, -0.133, 0.077) ( 0.000, -0.133, 0.077) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.238, -0.665, -1.230) ( 7.238, -0.665, -1.230) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 8 ( 27.568, -1.841, -1.569) ( 27.570, -1.840, -1.569) ( 0.01, 0.04, 0.04) bond ( 28.025, -0.000, -0.000) ( 28.028, 0.000, 0.000) ( 0.01, 0.00, 0.00) - angle ( -0.000, -1.856, -0.010) ( 0.000, -1.856, -0.009) ( 0.00, 0.03, 0.00) + angle ( 0.000, -1.856, -0.010) ( 0.000, -1.856, -0.009) ( 0.00, 0.03, 0.00) strbnd ( 0.304, 1.915, -0.000) ( 0.304, 1.915, -0.000) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, -0.469) ( 0.000, 0.000, -0.469) ( 0.00, 0.00, 0.00) + torsion ( 0.000, -0.000, -0.469) ( 0.000, 0.000, -0.469) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.762, -1.899, -1.090) ( -0.762, -1.899, -1.090) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -7277,7 +7312,7 @@ strbnd ( 20.845, -29.505, 51.044) ( 20.845, -29.506, 51.044) ( 0.00, 0.00, 0.00) torsion ( -0.002, -0.001, -0.002) ( -0.002, -0.001, -0.002) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 2 (267.229, 1.097, -1.985) (267.239, 1.101, -1.981) ( 0.00, 0.37, 0.20) bond (324.092, 0.002, 0.003) (324.102, 0.005, 0.006) ( 0.00, 0.00, 0.00) @@ -7307,7 +7342,7 @@ bond ( -9.351, 26.406, -0.000) ( -9.351, 26.409, 0.000) ( 0.00, 0.01, 0.00) angle ( 2.316, 0.820, -0.007) ( 2.316, 0.820, -0.006) ( 0.02, 0.00, 0.00) strbnd ( 13.869, 5.072, 0.000) ( 13.869, 5.072, 0.000) ( 0.00, 0.00, 0.00) - torsion ( 0.000, -0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.187, 1.385, -0.040) ( 7.187, 1.385, -0.040) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -7557,17 +7592,17 @@ angle ( -9.008, -1.801, 6.507) ( -9.006, -1.799, 6.508) ( 0.02, 0.10, 0.03) strbnd ( 0.507, -2.141, 2.316) ( 0.507, -2.141, 2.315) ( 0.04, 0.02, 0.03) torsion ( 0.379, 2.149, -1.075) ( 0.379, 2.149, -1.075) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.389, 4.398, 0.864) ( -2.389, 4.398, 0.864) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( -0.056, -0.173, -0.298) ( -0.051, -0.167, -0.292) ( 0.03, 0.09, 0.18) bond ( -9.863, -5.250, 2.250) ( -9.858, -5.246, 2.255) ( 0.04, 0.08, 0.21) angle ( 12.507, 0.572, 0.600) ( 12.509, 0.573, 0.602) ( 0.02, 0.10, 0.10) strbnd ( 0.608, -3.802, 1.723) ( 0.607, -3.803, 1.722) ( 0.05, 0.02, 0.03) torsion ( -1.338, 1.223, -0.733) ( -1.338, 1.223, -0.733) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.970, 7.085, -4.139) ( -1.970, 7.085, -4.139) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( 0.006, -0.005, 0.058) ( 0.012, 0.000, 0.060) ( 0.00, 0.00, 0.02) bond ( -0.866, -18.509, 3.882) ( -0.862, -18.505, 3.887) ( 0.40, 0.02, 0.12) angle ( 5.959, 26.024, -8.109) ( 5.962, 26.026, -8.108) ( 0.04, 0.01, 0.02) @@ -7581,9 +7616,9 @@ angle ( -5.572, -18.333, 5.423) ( -5.570, -18.330, 5.425) ( 0.04, 0.01, 0.03) strbnd ( -1.114, -2.631, -0.165) ( -1.115, -2.631, -0.166) ( 0.10, 0.02, 0.00) torsion ( 3.318, -0.490, -3.647) ( 3.318, -0.490, -3.647) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.225, 9.078, -0.852) ( 7.225, 9.078, -0.852) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -0.228, 0.018, 0.143) ( -0.223, 0.024, 0.149) ( 0.11, 0.01, 0.08) bond ( 4.426, -15.861, -0.954) ( 4.429, -15.857, -0.949) ( 0.08, 0.03, 0.45) angle ( -8.266, 12.873, -7.689) ( -8.264, 12.875, -7.687) ( 0.02, 0.02, 0.03) @@ -7597,7 +7632,7 @@ angle ( -2.830, -11.271, 1.923) ( -2.828, -11.269, 1.924) ( 0.07, 0.02, 0.10) strbnd ( 1.105, -0.095, 0.631) ( 1.104, -0.095, 0.630) ( 0.10, 0.01, 0.02) torsion ( 1.263, -4.544, -4.977) ( 1.263, -4.544, -4.977) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.574, 1.387, 1.663) ( 1.574, 1.387, 1.663) ( 0.01, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( -0.164, 0.308, 0.056) ( -0.159, 0.314, 0.060) ( 0.08, 0.19, 0.03) @@ -7605,7 +7640,7 @@ angle ( -6.707, 11.635, 3.591) ( -6.705, 11.637, 3.594) ( 0.03, 0.02, 0.06) strbnd ( 1.933, -1.383, -4.721) ( 1.932, -1.383, -4.722) ( 0.05, 0.02, 0.03) torsion ( -0.767, 1.045, 0.680) ( -0.767, 1.045, 0.680) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.685, -1.579, 0.134) ( -1.684, -1.579, 0.134) ( 0.01, 0.00, 0.00) electro ( 10.015, 1.730, -2.393) ( 10.015, 1.730, -2.393) ( 0.00, 0.00, 0.00) 29 ( -0.089, 0.132, -0.028) ( -0.179, 0.268, 0.043) ( 0.80, 1.80, 0.20) @@ -7653,7 +7688,7 @@ angle ( 3.434, -0.862, -3.531) ( 3.435, -0.861, -3.530) ( 0.02, 0.04, 0.03) strbnd ( -0.868, -0.657, 2.046) ( -0.868, -0.658, 2.046) ( 0.01, 0.00, 0.02) torsion ( -0.397, 0.278, 0.129) ( -0.397, 0.278, 0.129) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.894, 2.781, 6.709) ( -1.894, 2.781, 6.709) ( 0.01, 0.00, 0.00) electro (-13.976, -4.035, 5.969) (-13.976, -4.035, 5.969) ( 0.00, 0.00, 0.00) 35 ( 0.215, -0.454, -0.523) ( 0.219, -0.455, -0.518) ( 0.09, 0.03, 0.24) @@ -7757,15 +7792,15 @@ angle ( -1.189, 0.877, 0.440) ( -1.189, 0.878, 0.440) ( 0.04, 0.06, 0.01) strbnd ( -1.004, -2.559, -2.464) ( -1.004, -2.559, -2.464) ( 0.00, 0.00, 0.00) torsion ( 0.081, 1.012, -0.193) ( 0.081, 1.012, -0.193) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.317, 0.020, -1.836) ( -0.317, 0.020, -1.835) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 48 ( 0.158, 0.208, 0.381) ( 0.161, 0.209, 0.382) ( 0.05, 0.03, 0.02) bond ( -1.345, -0.662, -0.174) ( -1.342, -0.661, -0.174) ( 0.21, 0.04, 0.00) angle ( 2.482, -5.347, 1.171) ( 2.482, -5.347, 1.171) ( 0.00, 0.01, 0.04) strbnd ( -0.569, -0.838, -0.623) ( -0.569, -0.838, -0.623) ( 0.00, 0.00, 0.00) torsion ( 0.479, -1.375, 1.531) ( 0.479, -1.375, 1.531) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.889, 8.429, -1.524) ( -0.889, 8.429, -1.524) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 49 ( 0.370, -0.684, 0.437) ( 0.371, -0.684, 0.441) ( 0.03, 0.03, 0.14) @@ -7773,31 +7808,31 @@ angle ( 1.336, -2.129, -0.442) ( 1.336, -2.128, -0.442) ( 0.04, 0.02, 0.00) strbnd ( 0.611, -0.262, -0.310) ( 0.611, -0.262, -0.310) ( 0.00, 0.00, 0.00) torsion ( -0.104, -0.201, 0.021) ( -0.104, -0.201, 0.021) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.287, 1.882, 1.854) ( -1.287, 1.882, 1.854) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 50 ( 0.588, 0.088, 1.012) ( 0.589, 0.092, 1.013) ( 0.04, 0.03, 0.07) bond ( 0.403, -2.471, 0.627) ( 0.403, -2.468, 0.627) ( 0.00, 0.12, 0.01) angle ( 5.516, 0.699, -0.794) ( 5.517, 0.699, -0.793) ( 0.01, 0.00, 0.04) strbnd ( 0.314, 1.208, -0.817) ( 0.314, 1.208, -0.817) ( 0.00, 0.00, 0.00) torsion ( -0.531, -0.207, -0.474) ( -0.531, -0.207, -0.474) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.114, 0.860, 2.470) ( -5.114, 0.860, 2.470) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 51 ( -0.316, -0.193, -0.505) ( -0.315, -0.192, -0.503) ( 0.06, 0.02, 0.10) bond ( 0.716, -0.298, -0.826) ( 0.717, -0.297, -0.824) ( 0.10, 0.01, 0.15) angle ( 1.189, -5.329, 2.958) ( 1.189, -5.328, 2.959) ( 0.03, 0.01, 0.01) strbnd ( -0.047, -0.589, -0.422) ( -0.047, -0.589, -0.422) ( 0.00, 0.00, 0.00) torsion ( 0.936, -0.735, 1.080) ( 0.936, -0.735, 1.080) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.110, 6.758, -3.296) ( -3.110, 6.758, -3.296) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 52 ( -0.101, -0.092, -0.176) ( -0.100, -0.090, -0.175) ( 0.01, 0.02, 0.01) bond ( 1.134, -2.431, 0.852) ( 1.134, -2.428, 0.852) ( 0.05, 0.10, 0.03) angle ( -3.696, -1.139, 1.674) ( -3.696, -1.138, 1.675) ( 0.01, 0.01, 0.03) strbnd ( -1.209, 1.211, -0.450) ( -1.209, 1.211, -0.450) ( 0.00, 0.00, 0.00) torsion ( -0.018, 0.060, 0.194) ( -0.018, 0.060, 0.194) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 3.689, 2.206, -2.447) ( 3.689, 2.206, -2.447) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 53 ( 0.304, -0.091, -0.474) ( 0.305, -0.090, -0.471) ( 0.04, 0.01, 0.12) @@ -7807,13 +7842,13 @@ torsion ( 0.427, -0.471, -0.145) ( 0.427, -0.471, -0.145) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.333, 4.990, -0.524) ( -0.333, 4.990, -0.524) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 54 ( 0.047, 0.327, 0.213) ( 0.048, 0.328, 0.216) ( 0.00, 0.04, 0.06) bond ( 0.044, 0.448, -1.022) ( 0.044, 0.449, -1.019) ( 0.00, 0.02, 0.28) angle ( -5.073, 4.709, 1.855) ( -5.072, 4.710, 1.855) ( 0.01, 0.01, 0.00) strbnd ( -0.688, -1.108, -0.508) ( -0.688, -1.108, -0.508) ( 0.00, 0.00, 0.00) torsion ( 0.301, 0.513, 0.239) ( 0.301, 0.513, 0.239) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.463, -4.236, -0.352) ( 5.463, -4.236, -0.352) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 55 ( -0.139, -0.301, 0.325) ( -0.139, -0.299, 0.327) ( 0.01, 0.06, 0.06) @@ -7821,7 +7856,7 @@ angle ( -0.993, 1.847, -1.929) ( -0.992, 1.847, -1.929) ( 0.07, 0.01, 0.01) strbnd ( -0.720, -1.271, 0.377) ( -0.720, -1.271, 0.377) ( 0.00, 0.00, 0.00) torsion ( 0.101, 0.125, -0.120) ( 0.101, 0.125, -0.120) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.469, -0.945, 2.055) ( 1.469, -0.944, 2.055) ( 0.01, 0.01, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 56 ( -0.037, -0.300, -0.241) ( -0.036, -0.299, -0.238) ( 0.00, 0.04, 0.06) @@ -7829,9 +7864,9 @@ angle ( -1.373, -1.962, -1.160) ( -1.373, -1.962, -1.159) ( 0.05, 0.02, 0.01) strbnd ( -0.304, 0.067, 1.171) ( -0.304, 0.067, 1.171) ( 0.00, 0.00, 0.00) torsion ( -1.378, 0.531, 0.218) ( -1.378, 0.532, 0.218) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.841, -0.714, 2.749) ( 2.842, -0.714, 2.749) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 57 ( 0.041, 0.148, -0.296) ( 0.041, 0.150, -0.294) ( 0.00, 0.03, 0.06) bond ( -0.135, 2.007, 2.146) ( -0.135, 2.009, 2.147) ( 0.00, 0.08, 0.08) angle ( 0.451, -0.692, 0.675) ( 0.452, -0.692, 0.675) ( 0.03, 0.02, 0.02) @@ -7839,61 +7874,61 @@ torsion ( -1.075, -0.300, 0.213) ( -1.075, -0.300, 0.213) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.976, -0.838, -2.392) ( 0.976, -0.838, -2.392) ( 0.02, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 58 ( -0.254, 0.017, -0.064) ( -0.254, 0.019, -0.062) ( 0.02, 0.00, 0.02) bond ( -0.040, -1.500, 1.928) ( -0.040, -1.499, 1.930) ( 0.00, 0.08, 0.11) angle ( -1.136, 1.312, 0.995) ( -1.135, 1.312, 0.995) ( 0.05, 0.03, 0.02) strbnd ( 0.280, -0.457, -0.574) ( 0.280, -0.457, -0.574) ( 0.00, 0.00, 0.00) torsion ( 0.158, 0.214, 0.170) ( 0.158, 0.214, 0.170) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.484, 0.449, -2.583) ( 0.484, 0.449, -2.583) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 59 ( -0.039, 0.371, 0.524) ( -0.039, 0.373, 0.526) ( 0.00, 0.07, 0.11) bond ( 0.250, 2.246, -2.453) ( 0.250, 2.247, -2.451) ( 0.00, 0.07, 0.07) angle ( -0.227, 0.092, 0.062) ( -0.226, 0.092, 0.062) ( 0.01, 0.00, 0.00) strbnd ( -0.193, -0.135, 1.231) ( -0.193, -0.135, 1.231) ( 0.00, 0.00, 0.00) torsion ( 0.564, 2.085, 1.969) ( 0.564, 2.085, 1.969) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.433, -3.917, -0.285) ( -0.433, -3.917, -0.285) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 60 ( -0.063, -0.072, 0.504) ( -0.062, -0.071, 0.506) ( 0.01, 0.01, 0.13) bond ( 0.260, 1.745, 3.031) ( 0.260, 1.746, 3.033) ( 0.00, 0.05, 0.08) angle ( 3.751, -1.603, 0.601) ( 3.752, -1.603, 0.601) ( 0.02, 0.02, 0.01) strbnd ( -0.199, -0.015, -1.540) ( -0.199, -0.015, -1.540) ( 0.00, 0.00, 0.00) torsion ( -1.382, 1.853, -0.948) ( -1.382, 1.853, -0.948) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.493, -2.052, -0.640) ( -2.493, -2.052, -0.640) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 61 ( -0.281, 0.189, -0.034) ( -0.280, 0.192, -0.033) ( 0.02, 0.06, 0.00) bond ( 0.133, -2.004, 0.580) ( 0.133, -2.001, 0.581) ( 0.00, 0.15, 0.02) angle ( 0.076, -0.444, -1.547) ( 0.077, -0.444, -1.546) ( 0.00, 0.00, 0.04) strbnd ( -0.121, -0.013, 0.295) ( -0.121, -0.013, 0.295) ( 0.00, 0.00, 0.00) torsion ( 0.940, 0.033, -0.103) ( 0.940, 0.033, -0.103) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.309, 2.616, 0.740) ( -1.309, 2.616, 0.740) ( 0.01, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 62 ( -0.037, 0.359, 0.037) ( -0.037, 0.362, 0.038) ( 0.00, 0.10, 0.00) bond ( -0.580, 1.889, -0.905) ( -0.580, 1.891, -0.905) ( 0.01, 0.13, 0.05) angle ( -0.273, 0.763, 1.769) ( -0.273, 0.763, 1.769) ( 0.01, 0.01, 0.02) strbnd ( -0.325, 0.488, 0.279) ( -0.325, 0.488, 0.279) ( 0.00, 0.00, 0.00) torsion ( 1.294, 0.792, 0.827) ( 1.294, 0.792, 0.827) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.153, -3.573, -1.933) ( -0.153, -3.573, -1.933) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 63 ( -0.297, 0.195, 0.097) ( -0.296, 0.196, 0.100) ( 0.03, 0.01, 0.03) bond ( 0.610, 0.315, 1.633) ( 0.610, 0.315, 1.636) ( 0.02, 0.00, 0.18) angle ( -1.418, 1.386, 0.261) ( -1.418, 1.387, 0.261) ( 0.03, 0.03, 0.00) strbnd ( -0.282, 0.382, 0.365) ( -0.282, 0.382, 0.365) ( 0.00, 0.00, 0.00) torsion ( 0.426, 0.990, -0.350) ( 0.426, 0.990, -0.350) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.367, -2.878, -1.812) ( 0.367, -2.878, -1.812) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 64 ( 5.704, -0.249, 0.138) ( 5.704, -0.244, 0.139) ( 0.00, 0.13, 0.01) bond ( 0.052, 0.524, -0.141) ( 0.052, 0.529, -0.141) ( 0.00, 0.27, 0.01) angle ( 0.150, -0.836, -3.088) ( 0.150, -0.836, -3.088) ( 0.00, 0.00, 0.02) strbnd ( -0.049, -0.575, 0.050) ( -0.049, -0.575, 0.050) ( 0.00, 0.00, 0.00) torsion ( 0.430, -0.034, 0.030) ( 0.430, -0.034, 0.030) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.052, 1.173, 1.899) ( 0.052, 1.173, 1.900) ( 0.00, 0.00, 0.00) electro ( 5.069, -0.500, 1.387) ( 5.069, -0.500, 1.387) ( 0.00, 0.00, 0.00) 65 ( -0.114, 0.570, -0.149) ( -0.109, 0.571, -0.148) ( 0.06, 0.02, 0.01) @@ -7901,7 +7936,7 @@ angle ( 0.082, -0.169, 2.424) ( 0.082, -0.169, 2.425) ( 0.00, 0.00, 0.02) strbnd ( 0.390, 0.135, -0.958) ( 0.390, 0.135, -0.958) ( 0.00, 0.00, 0.00) torsion ( -0.084, 0.524, 0.039) ( -0.084, 0.524, 0.039) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.216, 1.133, 7.265) ( -1.216, 1.133, 7.265) ( 0.00, 0.00, 0.00) electro ( 17.799, 1.709, -9.304) ( 17.799, 1.709, -9.304) ( 0.00, 0.00, 0.00) ok 14 # gradients @@ -8061,50 +8096,50 @@ bond ( 6.549, -6.489, -5.236) ( 6.550, -6.488, -5.235) ( 0.02, 0.02, 0.02) angle (-15.891, -11.333, -5.837) (-15.890, -11.333, -5.837) ( 0.00, 0.00, 0.01) strbnd ( -1.046, 0.503, 0.436) ( -1.046, 0.503, 0.436) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.839, 1.264, 1.139) ( 0.839, 1.264, 1.139) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 20 ( -6.872, -6.628, -8.449) ( -6.870, -6.627, -8.448) ( 0.02, 0.01, 0.02) bond ( -7.287, 3.445, -8.054) ( -7.286, 3.445, -8.052) ( 0.02, 0.01, 0.02) angle ( -1.156, -10.327, -3.372) ( -1.156, -10.326, -3.372) ( 0.02, 0.01, 0.01) strbnd ( 1.415, -1.060, 1.430) ( 1.415, -1.060, 1.430) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.156, 1.313, 1.547) ( 0.156, 1.313, 1.547) ( 0.00, 0.00, 0.00) electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 21 ( -5.154, -11.419, -3.897) ( -5.153, -11.418, -3.895) ( 0.02, 0.01, 0.04) bond ( -5.951, -7.142, 6.246) ( -5.950, -7.141, 6.247) ( 0.02, 0.02, 0.02) angle ( -0.744, -6.990, -8.698) ( -0.743, -6.990, -8.698) ( 0.02, 0.00, 0.01) strbnd ( 1.377, 1.441, -1.809) ( 1.377, 1.441, -1.809) ( 0.00, 0.00, 0.00) - torsion ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.163, 1.273, 0.365) ( 0.163, 1.273, 0.365) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 22 ( 6.707, 14.950, -4.095) ( 6.709, 14.951, -4.094) ( 0.04, 0.00, 0.03) bond ( 10.180, 0.038, -5.182) ( 10.183, 0.038, -5.181) ( 0.02, 0.00, 0.01) angle ( -0.643, 16.864, -1.139) ( -0.642, 16.864, -1.139) ( 0.01, 0.00, 0.03) strbnd ( -2.565, 0.430, 1.327) ( -2.565, 0.430, 1.327) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.266, -2.382, 0.899) ( -0.266, -2.382, 0.899) ( 0.00, 0.00, 0.00) electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( 7.712, 7.044, 4.929) ( 7.712, 7.045, 4.931) ( 0.01, 0.01, 0.05) bond ( 2.115, 4.636, 9.930) ( 2.115, 4.637, 9.932) ( 0.01, 0.01, 0.02) angle ( 6.274, 3.725, -3.075) ( 6.274, 3.725, -3.075) ( 0.01, 0.01, 0.00) strbnd ( -0.199, -0.342, -1.642) ( -0.199, -0.342, -1.642) ( 0.00, 0.00, 0.00) - torsion ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.477, -0.975, -0.284) ( -0.477, -0.975, -0.284) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( 10.798, 13.827, -7.791) ( 10.799, 13.829, -7.790) ( 0.01, 0.01, 0.02) bond ( -5.076, 7.231, -5.839) ( -5.075, 7.232, -5.838) ( 0.01, 0.02, 0.02) angle ( 15.920, 8.574, -3.218) ( 15.920, 8.575, -3.218) ( 0.00, 0.00, 0.01) strbnd ( 0.876, -0.556, 0.755) ( 0.876, -0.556, 0.755) ( 0.00, 0.00, 0.00) - torsion ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.922, -1.422, 0.511) ( -0.922, -1.422, 0.511) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) ok 16 # gradients ok 17 # energy ---------------------------------------------------------------------------------------- @@ -8730,15 +8765,171 @@ torsion ( 0.000, 0.000, -0.009) ( 0.000, 0.000, -0.009) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.791, -1.108, -0.087) ( -3.791, -1.108, -0.087) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 17 ( 3.734, 1.697, 3.317) ( 3.735, 1.697, 3.320) ( 0.03, 0.05, 0.08) bond ( -0.653, 0.424, 1.150) ( -0.653, 0.424, 1.152) ( 0.05, 0.01, 0.21) angle ( 4.116, 2.173, 1.530) ( 4.116, 2.174, 1.530) ( 0.01, 0.02, 0.01) strbnd ( 2.185, 0.599, -0.219) ( 2.185, 0.599, -0.219) ( 0.00, 0.00, 0.00) torsion ( 0.003, -0.008, 0.004) ( 0.003, -0.008, 0.004) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -1.916, -1.492, 0.852) ( -1.916, -1.492, 0.852) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +18 ( 3.357, 1.877, -3.735) ( 3.358, 1.877, -3.733) ( 0.04, 0.05, 0.07) + bond ( -0.951, 0.766, -1.640) ( -0.950, 0.766, -1.638) ( 0.07, 0.04, 0.14) + angle ( 4.217, 2.283, -1.378) ( 4.217, 2.284, -1.377) ( 0.01, 0.02, 0.01) + strbnd ( 2.195, 0.574, 0.319) ( 2.195, 0.574, 0.319) ( 0.00, 0.00, 0.00) + torsion ( -0.003, 0.007, 0.005) ( -0.003, 0.007, 0.005) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -2.102, -1.754, -1.042) ( -2.101, -1.754, -1.042) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +19 ( -0.948, 1.749, -2.994) ( -0.947, 1.750, -2.991) ( 0.08, 0.04, 0.10) + bond ( 0.687, 0.547, -1.969) ( 0.688, 0.547, -1.967) ( 0.02, 0.01, 0.15) + angle ( -2.117, 0.190, -0.687) ( -2.116, 0.190, -0.687) ( 0.02, 0.01, 0.01) + strbnd ( -1.351, -0.031, 0.069) ( -1.351, -0.031, 0.069) ( 0.00, 0.00, 0.00) + torsion ( -0.009, 1.344, 0.371) ( -0.009, 1.344, 0.371) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 1.840, -0.300, -0.777) ( 1.840, -0.300, -0.777) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +20 ( 3.214, -1.427, 1.320) ( 3.215, -1.424, 1.320) ( 0.03, 0.21, 0.05) + bond ( 0.757, -1.956, 0.504) ( 0.757, -1.953, 0.504) ( 0.03, 0.15, 0.01) + angle ( -2.944, -1.085, 0.217) ( -2.943, -1.085, 0.218) ( 0.02, 0.01, 0.01) + strbnd ( -1.362, 0.055, -0.006) ( -1.362, 0.055, -0.006) ( 0.00, 0.00, 0.00) + torsion ( -0.001, -0.023, -0.087) ( -0.001, -0.023, -0.087) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 6.765, 1.580, 0.691) ( 6.765, 1.580, 0.691) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +21 ( 1.311, 2.298, 1.796) ( 1.312, 2.300, 1.798) ( 0.07, 0.08, 0.10) + bond ( 0.773, 1.536, 1.536) ( 0.773, 1.538, 1.538) ( 0.03, 0.10, 0.10) + angle ( -2.380, 0.642, 0.554) ( -2.380, 0.642, 0.554) ( 0.02, 0.02, 0.01) + strbnd ( -1.349, -0.045, -0.017) ( -1.349, -0.045, -0.017) ( 0.00, 0.00, 0.00) + torsion ( -0.034, 1.670, -1.653) ( -0.034, 1.670, -1.653) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 4.301, -1.506, 1.375) ( 4.301, -1.506, 1.375) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +22 ( -2.919, 0.875, 1.448) ( -2.916, 0.876, 1.450) ( 0.08, 0.06, 0.11) + bond ( -1.870, -0.110, 1.417) ( -1.868, -0.110, 1.418) ( 0.12, 0.00, 0.09) + angle ( 0.520, -2.593, 0.484) ( 0.520, -2.593, 0.484) ( 0.01, 0.02, 0.01) + strbnd ( 0.654, -1.205, 0.011) ( 0.654, -1.205, 0.011) ( 0.00, 0.00, 0.00) + torsion ( -1.476, -0.834, -2.010) ( -1.476, -0.834, -2.010) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.746, 5.617, 1.547) ( -0.746, 5.617, 1.547) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +23 ( -2.177, 4.626, 0.844) ( -2.175, 4.628, 0.845) ( 0.08, 0.05, 0.06) + bond ( 1.483, 1.776, 0.765) ( 1.485, 1.778, 0.766) ( 0.09, 0.10, 0.03) + angle ( 2.624, -2.307, 0.268) ( 2.625, -2.307, 0.268) ( 0.01, 0.01, 0.01) + strbnd ( 0.634, -1.241, -0.006) ( 0.634, -1.242, -0.006) ( 0.00, 0.00, 0.00) + torsion ( 0.519, 0.264, -1.620) ( 0.519, 0.264, -1.620) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -7.437, 6.134, 1.436) ( -7.437, 6.134, 1.436) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +24 ( -0.385, -1.508, -3.050) ( -0.385, -1.508, -3.047) ( 0.03, 0.04, 0.10) + bond ( -0.615, 0.404, -1.895) ( -0.615, 0.404, -1.892) ( 0.02, 0.01, 0.16) + angle ( 0.873, -1.806, -0.669) ( 0.873, -1.806, -0.669) ( 0.04, 0.03, 0.01) + strbnd ( 0.665, -1.206, 0.041) ( 0.665, -1.206, 0.041) ( 0.00, 0.00, 0.00) + torsion ( -0.796, -0.434, 0.166) ( -0.796, -0.434, 0.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.512, 1.534, -0.692) ( -0.512, 1.534, -0.692) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +ok 20 # gradients +ok 21 # energy +---------------------------------------------------------------------------------------- + + VALIDATE GRADIENTS : /Volumes/Home/ghutchis/Desktop/UFF/cholesterol.gpr + + +ATOM IDX NUMERICAL GRADIENT ANALYTICAL GRADIENT REL. ERROR (%) +---------------------------------------------------------------------------------------- + 1 ( 0.967, 0.259, -0.197) ( 0.972, 0.264, -0.191) ( 0.49, 0.14, 0.12) + bond ( 0.905, 2.623, 8.120) ( 0.909, 2.627, 8.124) ( 0.37, 0.15, 0.05) + angle ( 7.385, 0.772, -9.892) ( 7.388, 0.774, -9.889) ( 0.03, 0.16, 0.02) + strbnd ( 0.181, 1.490, -0.840) ( 0.180, 1.489, -0.841) ( 0.02, 0.06, 0.05) + torsion ( -3.658, -1.057, 2.616) ( -3.658, -1.057, 2.616) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -3.221, -3.068, -0.045) ( -3.221, -3.068, -0.045) ( 0.00, 0.00, 0.00) + electro ( -0.625, -0.501, -0.156) ( -0.625, -0.501, -0.156) ( 0.00, 0.00, 0.00) + 2 ( 0.736, 0.034, 0.004) ( 0.742, 0.039, 0.010) ( 0.41, 0.02, 0.00) + bond ( 11.123, -1.351, -2.048) ( 11.127, -1.347, -2.044) ( 0.04, 0.29, 0.21) + angle ( -8.045, 1.278, 9.737) ( -8.043, 1.280, 9.739) ( 0.03, 0.16, 0.02) + strbnd ( 0.965, -2.280, 1.631) ( 0.965, -2.281, 1.630) ( 0.07, 0.04, 0.02) + torsion ( 4.294, 0.736, -3.479) ( 4.294, 0.736, -3.478) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -7.601, 1.652, -5.836) ( -7.601, 1.652, -5.836) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 3 ( 0.562, 0.076, -0.092) ( 0.566, 0.081, -0.087) ( 0.27, 0.04, 0.05) + bond ( 6.097, -9.677, 17.390) ( 6.101, -9.673, 17.394) ( 0.06, 0.04, 0.02) + angle ( -1.378, 4.252, -13.110) ( -1.376, 4.254, -13.108) ( 0.15, 0.05, 0.02) + strbnd ( 0.257, 0.181, -0.552) ( 0.256, 0.180, -0.552) ( 0.03, 0.01, 0.03) + torsion ( -0.355, 2.764, 0.802) ( -0.355, 2.764, 0.802) ( 0.00, 0.00, 0.01) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -4.059, 2.557, -4.623) ( -4.059, 2.557, -4.623) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 4 ( 1.701, 0.453, 0.308) ( 1.706, 0.472, 0.382) ( 0.30, 0.89, 2.27) + bond ( 8.642, 10.885, -8.146) ( 8.646, 10.889, -8.142) ( 0.04, 0.04, 0.05) + angle ( -7.598, -8.113, 12.883) ( -7.596, -8.111, 12.884) ( 0.03, 0.02, 0.01) + strbnd ( -1.384, 1.903, -1.050) ( -1.385, 1.903, -1.050) ( 0.08, 0.03, 0.05) + torsion ( 3.685, 2.177, -4.847) ( 3.685, 2.177, -4.846) ( 0.00, 0.00, 0.00) + oop ( -0.002, -0.088, -0.446) ( -0.002, -0.075, -0.377) ( 0.00, 0.12, 3.03) + vdw ( -1.895, -6.707, 1.430) ( -1.894, -6.706, 1.430) ( 0.00, 0.00, 0.00) + electro ( 0.253, 0.395, 0.484) ( 0.253, 0.395, 0.484) ( 0.00, 0.00, 0.00) + 5 ( -7.881, 4.561, -0.394) ( -7.870, 4.527, -0.600) ( 0.14, 0.76, 8.12) + bond (-12.705, 14.137, -1.636) (-12.697, 14.141, -1.636) ( 0.06, 0.03, 0.02) + angle ( 1.253, 3.126, -9.477) ( 1.254, 3.128, -9.476) ( 0.12, 0.05, 0.01) + strbnd ( 1.419, -3.117, 0.027) ( 1.419, -3.117, 0.027) ( 0.04, 0.02, 0.00) + torsion ( -0.255, 1.581, 7.797) ( -0.255, 1.581, 7.798) ( 0.00, 0.00, 0.01) + oop ( -0.011, 0.244, 1.272) ( -0.008, 0.203, 1.063) ( 0.00, 0.98, 16.38) + vdw ( 0.999, -11.742, 1.783) ( 0.999, -11.742, 1.783) ( 0.02, 0.00, 0.00) + electro ( 1.419, 0.332, -0.159) ( 1.419, 0.332, -0.159) ( 0.00, 0.00, 0.00) + 6 ( 8.807, -4.640, 1.194) ( 8.816, -4.626, 1.216) ( 0.11, 0.29, 1.77) + bond ( 3.884, 4.853, -0.204) ( 3.892, 4.858, -0.204) ( 0.19, 0.11, 0.01) + angle ( 1.621, -0.921, 2.154) ( 1.622, -0.919, 2.155) ( 0.08, 0.16, 0.02) + strbnd ( -1.690, 1.656, -0.349) ( -1.691, 1.655, -0.349) ( 0.04, 0.03, 0.00) + torsion ( -0.062, -0.722, -2.668) ( -0.062, -0.722, -2.667) ( 0.00, 0.00, 0.04) + oop ( -0.011, -0.030, -0.074) ( -0.010, -0.023, -0.055) ( 0.00, 0.02, 0.14) + vdw ( 4.938, -9.590, 2.718) ( 4.938, -9.589, 2.718) ( 0.00, 0.00, 0.00) + electro ( 0.127, 0.114, -0.383) ( 0.127, 0.114, -0.383) ( 0.00, 0.00, 0.00) + 7 ( -0.810, 0.444, -0.283) ( -0.806, 0.452, -0.254) ( 0.32, 0.37, 0.83) + bond (-11.282, 11.208, 0.541) (-11.278, 11.212, 0.545) ( 0.04, 0.03, 0.24) + angle ( 9.286, -4.053, -3.402) ( 9.288, -4.051, -3.400) ( 0.02, 0.05, 0.04) + strbnd ( 0.811, -0.072, -0.853) ( 0.810, -0.073, -0.854) ( 0.06, 0.01, 0.03) + torsion ( -1.331, -0.869, 0.696) ( -1.331, -0.869, 0.696) ( 0.00, 0.00, 0.02) + oop ( 0.009, -0.020, -0.131) ( 0.007, -0.017, -0.108) ( 0.00, 0.01, 0.31) + vdw ( 0.881, -5.592, 2.703) ( 0.881, -5.592, 2.703) ( 0.01, 0.00, 0.00) + electro ( 0.815, -0.158, 0.163) ( 0.815, -0.158, 0.163) ( 0.00, 0.00, 0.00) + 8 ( 0.736, 0.178, 0.067) ( 0.740, 0.183, 0.072) ( 0.35, 0.09, 0.04) + bond ( -1.261, -2.729, -19.147) ( -1.258, -2.725, -19.143) ( 0.27, 0.13, 0.02) + angle ( -9.942, 7.503, 26.405) ( -9.940, 7.505, 26.407) ( 0.02, 0.03, 0.01) + strbnd ( 4.138, 2.113, 0.872) ( 4.137, 2.112, 0.871) ( 0.02, 0.04, 0.03) + torsion ( 2.267, -2.809, -7.166) ( 2.267, -2.809, -7.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 5.533, -3.900, -0.897) ( 5.533, -3.899, -0.897) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 9 ( 0.364, 0.232, -0.008) ( 0.369, 0.237, -0.002) ( 0.20, 0.11, 0.00) + bond ( -6.983, 11.163, 5.799) ( -6.980, 11.166, 5.803) ( 0.06, 0.03, 0.07) + angle ( 6.589, 0.564, -10.864) ( 6.592, 0.566, -10.862) ( 0.04, 0.12, 0.02) + strbnd ( -4.331, -9.696, 0.323) ( -4.332, -9.697, 0.323) ( 0.02, 0.01, 0.01) + torsion ( 0.192, 1.536, 1.287) ( 0.192, 1.536, 1.287) ( 0.00, 0.00, 0.01) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 4.897, -3.334, 3.446) ( 4.897, -3.334, 3.447) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +10 ( 0.279, 0.320, 0.215) ( 0.284, 0.326, 0.221) ( 0.13, 0.18, 0.13) + bond ( 3.926, 16.947, -8.842) ( 3.929, 16.951, -8.838) ( 0.09, 0.02, 0.05) + angle ( -6.642, -8.727, 8.491) ( -6.640, -8.725, 8.493) ( 0.03, 0.02, 0.02) + strbnd ( -1.913, -4.925, 2.830) ( -1.914, -4.925, 2.830) ( 0.05, 0.01, 0.02) + torsion ( -1.013, -0.173, -1.195) ( -1.013, -0.173, -1.195) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 5.922, -2.802, -1.070) ( 5.922, -2.802, -1.070) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +11 ( 0.045, 0.535, 0.496) ( 0.051, 0.539, 0.502) ( 0.03, 0.24, 0.29) + bond (-22.008, -2.471, -8.891) (-22.004, -2.468, -8.886) ( 0.02, 0.14, 0.05) + angle ( 15.128, 5.024, 5.636) ( 15.130, 5.026, 5.638) ( 0.01, 0.04, 0.03) + strbnd ( 6.334, 1.549, 3.089) ( 6.333, 1.548, 3.089) ( 0.01, 0.06, 0.02) + torsion ( -1.616, 1.448, 1.166) ( -1.616, 1.448, 1.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 2.209, -5.015, -0.504) ( 2.209, -5.015, -0.504) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +12 ( 0.018, -0.028, -0.133) ( 0.022, -0.023, -0.128) ( 0.01, 0.01, 0.07) -224/229 Test #181: test_ffmmff94_3 ..................***Timeout 1500.07 sec +224/229 Test #181: test_ffmmff94_3 ..................***Timeout 1500.23 sec # Testing MMFF94 Force Field... ok 1 # energy ---------------------------------------------------------------------------------------- @@ -8817,7 +9008,7 @@ angle ( 2.902, 2.092, -7.874) ( 2.904, 2.094, -7.872) ( 0.05, 0.09, 0.03) strbnd ( -1.490, -4.290, 5.538) ( -1.491, -4.290, 5.537) ( 0.03, 0.02, 0.02) torsion ( 1.310, 0.148, 0.500) ( 1.310, 0.148, 0.500) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.133, 6.426, -2.475) ( -1.133, 6.427, -2.475) ( 0.00, 0.00, 0.00) electro ( 0.161, -0.154, -0.314) ( 0.161, -0.154, -0.314) ( 0.00, 0.00, 0.00) 10 ( 0.385, -1.062, -0.159) ( 0.412, -1.037, -0.241) ( 1.03, 2.28, 1.31) @@ -8921,7 +9112,7 @@ angle ( -1.279, 0.117, 4.947) ( -1.278, 0.117, 4.948) ( 0.03, 0.00, 0.01) strbnd ( -1.175, -1.676, -0.163) ( -1.175, -1.676, -0.163) ( 0.00, 0.01, 0.00) torsion ( -0.017, 0.448, -2.440) ( -0.017, 0.448, -2.440) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.912, 10.758, -1.469) ( -5.912, 10.758, -1.469) ( 0.00, 0.00, 0.00) electro ( 9.975, -0.305, -0.094) ( 9.975, -0.305, -0.094) ( 0.00, 0.00, 0.00) 23 ( 1.091, -0.357, -0.060) ( 1.092, -0.357, -0.050) ( 0.01, 0.00, 0.06) @@ -8939,21 +9130,21 @@ torsion ( -0.625, 0.065, -0.401) ( -0.625, 0.065, -0.401) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.476, -1.332, 4.015) ( -0.476, -1.332, 4.015) ( 0.01, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 25 ( -0.216, 0.307, 0.417) ( -0.215, 0.308, 0.419) ( 0.03, 0.03, 0.10) bond ( -0.012, -0.007, -0.021) ( -0.011, -0.007, -0.018) ( 0.00, 0.00, 0.00) angle ( -1.034, 6.306, -1.664) ( -1.034, 6.306, -1.664) ( 0.04, 0.01, 0.01) strbnd ( -0.562, 0.219, 0.095) ( -0.562, 0.219, 0.095) ( 0.00, 0.00, 0.00) torsion ( -0.037, -1.134, 0.433) ( -0.037, -1.134, 0.433) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.429, -5.077, 1.574) ( 1.429, -5.077, 1.574) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -0.284, -0.046, -0.073) ( -0.283, -0.045, -0.071) ( 0.02, 0.01, 0.02) bond ( -0.628, 1.336, 2.092) ( -0.627, 1.337, 2.095) ( 0.01, 0.07, 0.11) angle ( -0.745, -7.579, 4.614) ( -0.744, -7.579, 4.614) ( 0.03, 0.01, 0.00) strbnd ( -0.133, -0.439, 0.449) ( -0.133, -0.439, 0.449) ( 0.00, 0.00, 0.00) torsion ( -0.063, 0.000, -0.019) ( -0.063, 0.000, -0.019) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.284, 6.636, -7.210) ( 1.284, 6.636, -7.210) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 27 ( -0.055, 0.024, 0.090) ( -0.053, 0.026, 0.091) ( 0.01, 0.00, 0.01) @@ -8963,7 +9154,7 @@ torsion ( 0.024, 0.049, 0.043) ( 0.024, 0.049, 0.043) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.136, 0.552, -0.214) ( -0.136, 0.552, -0.214) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( 0.017, -0.066, -0.165) ( 0.019, -0.065, -0.164) ( 0.00, 0.01, 0.01) bond ( -0.618, -0.478, -0.203) ( -0.616, -0.477, -0.203) ( 0.12, 0.06, 0.00) angle ( 0.508, -0.622, -0.082) ( 0.508, -0.622, -0.081) ( 0.01, 0.02, 0.00) @@ -8971,13 +9162,13 @@ torsion ( 0.032, -0.035, -0.016) ( 0.032, -0.035, -0.016) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.032, 1.319, -0.446) ( 0.032, 1.319, -0.446) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 29 ( -0.042, 0.017, 0.205) ( -0.040, 0.019, 0.206) ( 0.01, 0.00, 0.03) bond ( 0.190, -0.138, 0.157) ( 0.192, -0.137, 0.158) ( 0.03, 0.01, 0.02) angle ( -1.278, -5.641, -3.328) ( -1.277, -5.640, -3.328) ( 0.02, 0.01, 0.01) strbnd ( -0.058, -0.697, 0.159) ( -0.058, -0.697, 0.159) ( 0.00, 0.00, 0.00) torsion ( -0.378, 0.160, 0.596) ( -0.378, 0.160, 0.596) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.482, 6.333, 2.621) ( 1.482, 6.333, 2.621) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 30 ( 0.055, -0.028, 0.141) ( 0.056, -0.027, 0.144) ( 0.01, 0.00, 0.03) @@ -8985,39 +9176,39 @@ angle ( -0.262, -0.474, -0.393) ( -0.261, -0.474, -0.393) ( 0.01, 0.02, 0.01) strbnd ( -0.413, -0.294, -0.338) ( -0.413, -0.294, -0.338) ( 0.00, 0.00, 0.00) torsion ( 0.017, -0.020, -0.001) ( 0.017, -0.020, -0.001) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.156, 1.146, 0.117) ( 1.156, 1.146, 0.117) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 31 ( -0.052, 0.041, 0.085) ( -0.051, 0.043, 0.086) ( 0.01, 0.01, 0.01) bond ( 0.468, -0.992, -0.774) ( 0.469, -0.990, -0.773) ( 0.02, 0.18, 0.09) angle ( -4.788, 0.065, -2.987) ( -4.788, 0.065, -2.987) ( 0.01, 0.00, 0.01) strbnd ( -0.780, 0.245, 0.269) ( -0.780, 0.245, 0.269) ( 0.00, 0.00, 0.00) torsion ( 0.095, -0.413, 0.587) ( 0.095, -0.413, 0.587) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.954, 1.137, 2.990) ( 4.954, 1.137, 2.990) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 32 ( 0.029, -0.014, -0.100) ( 0.031, -0.012, -0.100) ( 0.01, 0.00, 0.01) bond ( 0.990, 1.125, 0.207) ( 0.992, 1.126, 0.207) ( 0.14, 0.17, 0.00) angle ( 3.214, -2.731, -0.541) ( 3.214, -2.730, -0.540) ( 0.01, 0.01, 0.02) strbnd ( 0.051, -0.498, -0.006) ( 0.050, -0.498, -0.006) ( 0.00, 0.00, 0.00) torsion ( -0.050, -0.015, 0.320) ( -0.050, -0.015, 0.320) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -4.176, 2.106, -0.080) ( -4.176, 2.106, -0.080) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 33 ( 0.011, 0.007, -0.103) ( 0.012, 0.009, -0.100) ( 0.00, 0.00, 0.02) bond ( 0.411, -0.710, -1.123) ( 0.412, -0.709, -1.121) ( 0.01, 0.06, 0.20) angle ( 2.741, 1.372, 0.138) ( 2.741, 1.373, 0.138) ( 0.02, 0.03, 0.00) strbnd ( 0.276, -0.000, 0.286) ( 0.276, -0.000, 0.286) ( 0.00, 0.00, 0.00) torsion ( -0.286, -0.647, 0.304) ( -0.286, -0.647, 0.304) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.131, -0.007, 0.292) ( -3.131, -0.007, 0.292) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 34 ( 0.075, -0.007, -0.103) ( 0.076, -0.006, -0.101) ( 0.00, 0.00, 0.02) bond ( 0.035, -0.551, 0.735) ( 0.035, -0.550, 0.737) ( 0.00, 0.07, 0.16) angle ( 1.556, 0.759, 0.492) ( 1.556, 0.759, 0.493) ( 0.03, 0.02, 0.01) strbnd ( 0.359, -0.089, -0.017) ( 0.359, -0.089, -0.017) ( 0.00, 0.00, 0.00) torsion ( -0.120, -0.433, -0.317) ( -0.120, -0.433, -0.317) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.755, 0.308, -0.996) ( -1.755, 0.308, -0.996) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 35 ( 1.750, -1.226, 0.260) ( 1.752, -1.223, 0.261) ( 0.10, 0.24, 0.04) @@ -9083,8 +9274,8 @@ strbnd ( -2.009, -0.344, -0.542) ( -2.010, -0.344, -0.542) ( 0.03, 0.02, 0.00) torsion ( 0.001, 0.000, -0.005) ( 0.001, 0.000, -0.004) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.000, -0.001) ( 0.000, 0.000, -0.001) ( 0.00, 0.00, 0.00) - vdw ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 3 ( 0.063, 0.140, 0.024) ( 0.065, 0.142, 0.025) ( 0.01, 0.04, 0.00) bond ( 1.119, 1.704, 0.350) ( 1.120, 1.706, 0.350) ( 0.10, 0.15, 0.00) angle ( 1.146, -0.809, 0.277) ( 1.146, -0.809, 0.277) ( 0.03, 0.02, 0.00) @@ -9120,7 +9311,7 @@ 7 ( -0.447, -0.202, -0.130) ( -0.443, -0.195, -0.129) ( 0.18, 0.16, 0.01) bond ( 0.245, 0.341, 0.076) ( 0.249, 0.348, 0.077) ( 0.10, 0.26, 0.00) angle ( -0.389, 0.299, -0.100) ( -0.389, 0.299, -0.099) ( 0.01, 0.00, 0.00) - strbnd ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + strbnd ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.646, 0.581, 0.189) ( 0.646, 0.581, 0.189) ( 0.00, 0.00, 0.00) @@ -9148,8 +9339,8 @@ strbnd ( -8.362, -5.365, 9.214) ( -8.362, -5.366, 9.212) ( 0.01, 0.01, 0.02) torsion ( 0.021, -0.143, 0.129) ( 0.021, -0.143, 0.129) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.137, -0.079) ( -0.000, -0.113, -0.065) ( 0.00, 0.34, 0.11) - vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 3 ( -0.084, -0.016, 0.020) ( -0.082, -0.019, 0.022) ( 0.02, 0.00, 0.01) bond ( -1.795, -1.762, 3.022) ( -1.793, -1.760, 3.028) ( 0.11, 0.11, 0.18) angle ( -8.883, 2.272, -3.938) ( -8.882, 2.272, -3.938) ( 0.01, 0.00, 0.00) @@ -9189,7 +9380,7 @@ torsion ( 0.043, -0.004, 0.425) ( 0.043, -0.004, 0.425) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.977, -0.460, -0.633) ( -1.977, -0.460, -0.633) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 8 ( 0.007, -0.431, 0.471) ( 0.008, -0.429, 0.474) ( 0.00, 0.05, 0.12) bond ( 0.017, -0.029, -0.055) ( 0.018, -0.028, -0.053) ( 0.00, 0.00, 0.01) angle ( 1.567, -0.533, 0.815) ( 1.568, -0.532, 0.815) ( 0.03, 0.02, 0.01) @@ -9197,7 +9388,7 @@ torsion ( 0.044, -0.368, 0.213) ( 0.044, -0.368, 0.213) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.992, 0.775, 0.081) ( -1.992, 0.775, 0.081) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 9 ( 0.179, -0.203, 0.341) ( 0.180, -0.202, 0.343) ( 0.02, 0.02, 0.08) bond ( 0.367, -0.375, 0.641) ( 0.368, -0.374, 0.643) ( 0.02, 0.03, 0.13) angle ( 1.546, 0.380, -0.664) ( 1.547, 0.380, -0.664) ( 0.03, 0.01, 0.01) @@ -9236,7 +9427,7 @@ angle ( -5.704, 0.511, -1.299) ( -5.703, 0.511, -1.299) ( 0.01, 0.00, 0.04) strbnd ( -0.435, 0.449, -0.226) ( -0.435, 0.449, -0.226) ( 0.00, 0.00, 0.00) torsion ( -0.156, -0.037, 0.231) ( -0.156, -0.037, 0.231) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 6.326, -2.115, 0.844) ( 6.326, -2.115, 0.844) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 4 ( -0.154, -0.035, 0.283) ( -0.151, -0.034, 0.284) ( 0.04, 0.00, 0.03) @@ -9244,7 +9435,7 @@ angle ( 0.309, -0.045, 0.666) ( 0.310, -0.044, 0.666) ( 0.01, 0.00, 0.03) strbnd ( -0.108, 0.417, -0.398) ( -0.108, 0.418, -0.398) ( 0.00, 0.00, 0.00) torsion ( -0.012, -0.211, -0.225) ( -0.012, -0.211, -0.225) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.175, 0.014, 0.016) ( 0.175, 0.014, 0.016) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 5 ( -0.220, -0.180, -0.107) ( -0.219, -0.179, -0.104) ( 0.01, 0.01, 0.04) @@ -9252,7 +9443,7 @@ angle ( -1.188, -0.996, 0.154) ( -1.187, -0.996, 0.154) ( 0.05, 0.05, 0.00) strbnd ( -0.441, 0.249, -0.473) ( -0.441, 0.249, -0.473) ( 0.00, 0.00, 0.00) torsion ( 0.429, 0.568, -0.091) ( 0.429, 0.568, -0.091) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.975, 0.076, 0.758) ( 0.975, 0.076, 0.758) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 6 ( 0.815, 1.141, -0.215) ( 0.856, 1.101, -0.316) ( 3.35, 3.49, 2.17) @@ -9300,7 +9491,7 @@ bond (-13.151, 0.001, 0.002) (-13.148, 0.005, 0.006) ( 0.03, 0.00, 0.00) angle ( -5.431, -2.186, 3.739) ( -5.429, -2.184, 3.741) ( 0.03, 0.08, 0.04) strbnd ( 4.098, -2.031, 3.530) ( 4.097, -2.031, 3.529) ( 0.04, 0.02, 0.01) - torsion ( 0.000, 0.166, -0.285) ( 0.000, 0.166, -0.285) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.166, -0.285) ( 0.000, 0.166, -0.285) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.551, 1.346, -2.346) ( 4.551, 1.346, -2.346) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -9340,7 +9531,7 @@ bond ( -9.329, -13.205, -22.882) ( -9.329, -13.205, -22.880) ( 0.00, 0.01, 0.01) angle ( 1.840, -0.299, -0.578) ( 1.840, -0.299, -0.578) ( 0.02, 0.01, 0.01) strbnd ( -1.909, 0.172, 0.297) ( -1.909, 0.172, 0.297) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.133, 0.077) ( 0.000, -0.133, 0.077) ( 0.00, 0.00, 0.00) + torsion ( 0.000, -0.133, 0.077) ( 0.000, -0.133, 0.077) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.238, -0.665, -1.230) ( 7.238, -0.665, -1.230) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -9348,7 +9539,7 @@ bond ( 28.025, -0.000, -0.000) ( 28.028, 0.000, 0.000) ( 0.01, 0.00, 0.00) angle ( -0.000, -1.856, -0.010) ( 0.000, -1.856, -0.009) ( 0.00, 0.03, 0.00) strbnd ( 0.304, 1.915, -0.000) ( 0.304, 1.915, -0.000) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, -0.469) ( 0.000, 0.000, -0.469) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, -0.469) ( 0.000, 0.000, -0.469) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.762, -1.899, -1.090) ( -0.762, -1.899, -1.090) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -9407,13 +9598,13 @@ strbnd ( 20.845, -29.505, 51.044) ( 20.845, -29.506, 51.044) ( 0.00, 0.00, 0.00) torsion ( -0.002, -0.001, -0.002) ( -0.002, -0.001, -0.002) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 2 (267.229, 1.097, -1.985) (267.239, 1.101, -1.981) ( 0.00, 0.37, 0.20) bond (324.092, 0.002, 0.003) (324.102, 0.005, 0.006) ( 0.00, 0.00, 0.00) angle ( -7.067, -9.049, 15.613) ( -7.066, -9.047, 15.614) ( 0.02, 0.02, 0.01) strbnd (-54.347, 8.796, -15.254) (-54.349, 8.796, -15.255) ( 0.00, 0.00, 0.00) - torsion ( -0.000, 0.001, -0.000) ( 0.000, 0.001, -0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.001, -0.000) ( 0.000, 0.001, -0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.551, 1.346, -2.346) ( 4.551, 1.346, -2.346) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -9437,7 +9628,7 @@ bond ( -9.351, 26.406, -0.000) ( -9.351, 26.409, 0.000) ( 0.00, 0.01, 0.00) angle ( 2.316, 0.820, -0.007) ( 2.316, 0.820, -0.006) ( 0.02, 0.00, 0.00) strbnd ( 13.869, 5.072, 0.000) ( 13.869, 5.072, 0.000) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.187, 1.385, -0.040) ( 7.187, 1.385, -0.040) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -9445,7 +9636,7 @@ bond ( -9.334, -13.210, 22.872) ( -9.334, -13.209, 22.874) ( 0.00, 0.01, 0.01) angle ( 2.371, -0.399, 0.737) ( 2.371, -0.398, 0.737) ( 0.02, 0.01, 0.01) strbnd ( 13.871, -2.534, 4.389) ( 13.871, -2.534, 4.389) ( 0.00, 0.00, 0.00) - torsion ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.183, 0.066, -0.115) ( 0.183, 0.066, -0.115) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -9461,7 +9652,7 @@ bond ( 28.025, -0.000, -0.000) ( 28.028, 0.000, 0.000) ( 0.01, 0.00, 0.00) angle ( -0.000, -2.447, -0.010) ( 0.000, -2.447, -0.009) ( 0.00, 0.02, 0.00) strbnd ( 0.148, -14.767, -0.000) ( 0.148, -14.767, -0.000) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.762, -1.899, -1.090) ( -0.762, -1.899, -1.090) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -9689,15 +9880,15 @@ torsion ( 0.379, 2.149, -1.075) ( 0.379, 2.149, -1.075) ( 0.00, 0.00, 0.00) oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.389, 4.398, 0.864) ( -2.389, 4.398, 0.864) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( -0.056, -0.173, -0.298) ( -0.051, -0.167, -0.292) ( 0.03, 0.09, 0.18) bond ( -9.863, -5.250, 2.250) ( -9.858, -5.246, 2.255) ( 0.04, 0.08, 0.21) angle ( 12.507, 0.572, 0.600) ( 12.509, 0.573, 0.602) ( 0.02, 0.10, 0.10) strbnd ( 0.608, -3.802, 1.723) ( 0.607, -3.803, 1.722) ( 0.05, 0.02, 0.03) torsion ( -1.338, 1.223, -0.733) ( -1.338, 1.223, -0.733) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.970, 7.085, -4.139) ( -1.970, 7.085, -4.139) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( 0.006, -0.005, 0.058) ( 0.012, 0.000, 0.060) ( 0.00, 0.00, 0.02) bond ( -0.866, -18.509, 3.882) ( -0.862, -18.505, 3.887) ( 0.40, 0.02, 0.12) angle ( 5.959, 26.024, -8.109) ( 5.962, 26.026, -8.108) ( 0.04, 0.01, 0.02) @@ -9711,15 +9902,15 @@ angle ( -5.572, -18.333, 5.423) ( -5.570, -18.330, 5.425) ( 0.04, 0.01, 0.03) strbnd ( -1.114, -2.631, -0.165) ( -1.115, -2.631, -0.166) ( 0.10, 0.02, 0.00) torsion ( 3.318, -0.490, -3.647) ( 3.318, -0.490, -3.647) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.225, 9.078, -0.852) ( 7.225, 9.078, -0.852) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -0.228, 0.018, 0.143) ( -0.223, 0.024, 0.149) ( 0.11, 0.01, 0.08) bond ( 4.426, -15.861, -0.954) ( 4.429, -15.857, -0.949) ( 0.08, 0.03, 0.45) angle ( -8.266, 12.873, -7.689) ( -8.264, 12.875, -7.687) ( 0.02, 0.02, 0.03) strbnd ( 1.193, 5.294, 4.137) ( 1.192, 5.293, 4.136) ( 0.07, 0.01, 0.03) torsion ( -0.164, -0.701, 3.652) ( -0.164, -0.701, 3.652) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.542, -1.377, 0.272) ( -0.542, -1.377, 0.272) ( 0.01, 0.00, 0.00) electro ( 3.125, -0.209, 0.725) ( 3.125, -0.209, 0.725) ( 0.00, 0.00, 0.00) 27 ( -0.131, 0.200, 0.315) ( -0.126, 0.205, 0.322) ( 0.06, 0.11, 0.19) @@ -9727,15 +9918,15 @@ angle ( -2.830, -11.271, 1.923) ( -2.828, -11.269, 1.924) ( 0.07, 0.02, 0.10) strbnd ( 1.105, -0.095, 0.631) ( 1.104, -0.095, 0.630) ( 0.10, 0.01, 0.02) torsion ( 1.263, -4.544, -4.977) ( 1.263, -4.544, -4.977) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.574, 1.387, 1.663) ( 1.574, 1.387, 1.663) ( 0.01, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( -0.164, 0.308, 0.056) ( -0.159, 0.314, 0.060) ( 0.08, 0.19, 0.03) bond ( -2.953, -11.140, 2.764) ( -2.949, -11.136, 2.768) ( 0.12, 0.04, 0.15) angle ( -6.707, 11.635, 3.591) ( -6.705, 11.637, 3.594) ( 0.03, 0.02, 0.06) strbnd ( 1.933, -1.383, -4.721) ( 1.932, -1.383, -4.722) ( 0.05, 0.02, 0.03) torsion ( -0.767, 1.045, 0.680) ( -0.767, 1.045, 0.680) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.685, -1.579, 0.134) ( -1.684, -1.579, 0.134) ( 0.01, 0.00, 0.00) electro ( 10.015, 1.730, -2.393) ( 10.015, 1.730, -2.393) ( 0.00, 0.00, 0.00) 29 ( -0.089, 0.132, -0.028) ( -0.179, 0.268, 0.043) ( 0.80, 1.80, 0.20) @@ -9775,7 +9966,7 @@ angle ( 8.749, -2.680, 5.549) ( 8.750, -2.680, 5.550) ( 0.01, 0.01, 0.02) strbnd ( 0.282, -2.395, -3.567) ( 0.282, -2.395, -3.567) ( 0.00, 0.00, 0.01) torsion ( -0.756, 0.926, -0.619) ( -0.756, 0.926, -0.619) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.059, 4.362, 2.702) ( 2.059, 4.362, 2.702) ( 0.01, 0.00, 0.00) electro (-11.239, 1.825, -2.594) (-11.239, 1.825, -2.594) ( 0.00, 0.00, 0.00) 34 ( 0.039, 0.551, 0.057) ( 0.045, 0.552, 0.061) ( 0.02, 0.04, 0.02) @@ -9783,7 +9974,7 @@ angle ( 3.434, -0.862, -3.531) ( 3.435, -0.861, -3.530) ( 0.02, 0.04, 0.03) strbnd ( -0.868, -0.657, 2.046) ( -0.868, -0.658, 2.046) ( 0.01, 0.00, 0.02) torsion ( -0.397, 0.278, 0.129) ( -0.397, 0.278, 0.129) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.894, 2.781, 6.709) ( -1.894, 2.781, 6.709) ( 0.01, 0.00, 0.00) electro (-13.976, -4.035, 5.969) (-13.976, -4.035, 5.969) ( 0.00, 0.00, 0.00) 35 ( 0.215, -0.454, -0.523) ( 0.219, -0.455, -0.518) ( 0.09, 0.03, 0.24) @@ -9887,47 +10078,47 @@ angle ( -1.189, 0.877, 0.440) ( -1.189, 0.878, 0.440) ( 0.04, 0.06, 0.01) strbnd ( -1.004, -2.559, -2.464) ( -1.004, -2.559, -2.464) ( 0.00, 0.00, 0.00) torsion ( 0.081, 1.012, -0.193) ( 0.081, 1.012, -0.193) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.317, 0.020, -1.836) ( -0.317, 0.020, -1.835) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 48 ( 0.158, 0.208, 0.381) ( 0.161, 0.209, 0.382) ( 0.05, 0.03, 0.02) bond ( -1.345, -0.662, -0.174) ( -1.342, -0.661, -0.174) ( 0.21, 0.04, 0.00) angle ( 2.482, -5.347, 1.171) ( 2.482, -5.347, 1.171) ( 0.00, 0.01, 0.04) strbnd ( -0.569, -0.838, -0.623) ( -0.569, -0.838, -0.623) ( 0.00, 0.00, 0.00) torsion ( 0.479, -1.375, 1.531) ( 0.479, -1.375, 1.531) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.889, 8.429, -1.524) ( -0.889, 8.429, -1.524) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 49 ( 0.370, -0.684, 0.437) ( 0.371, -0.684, 0.441) ( 0.03, 0.03, 0.14) bond ( -0.186, 0.025, -0.685) ( -0.186, 0.025, -0.682) ( 0.00, 0.00, 0.22) angle ( 1.336, -2.129, -0.442) ( 1.336, -2.128, -0.442) ( 0.04, 0.02, 0.00) strbnd ( 0.611, -0.262, -0.310) ( 0.611, -0.262, -0.310) ( 0.00, 0.00, 0.00) torsion ( -0.104, -0.201, 0.021) ( -0.104, -0.201, 0.021) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.287, 1.882, 1.854) ( -1.287, 1.882, 1.854) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 50 ( 0.588, 0.088, 1.012) ( 0.589, 0.092, 1.013) ( 0.04, 0.03, 0.07) bond ( 0.403, -2.471, 0.627) ( 0.403, -2.468, 0.627) ( 0.00, 0.12, 0.01) angle ( 5.516, 0.699, -0.794) ( 5.517, 0.699, -0.793) ( 0.01, 0.00, 0.04) strbnd ( 0.314, 1.208, -0.817) ( 0.314, 1.208, -0.817) ( 0.00, 0.00, 0.00) torsion ( -0.531, -0.207, -0.474) ( -0.531, -0.207, -0.474) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.114, 0.860, 2.470) ( -5.114, 0.860, 2.470) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 51 ( -0.316, -0.193, -0.505) ( -0.315, -0.192, -0.503) ( 0.06, 0.02, 0.10) bond ( 0.716, -0.298, -0.826) ( 0.717, -0.297, -0.824) ( 0.10, 0.01, 0.15) angle ( 1.189, -5.329, 2.958) ( 1.189, -5.328, 2.959) ( 0.03, 0.01, 0.01) strbnd ( -0.047, -0.589, -0.422) ( -0.047, -0.589, -0.422) ( 0.00, 0.00, 0.00) torsion ( 0.936, -0.735, 1.080) ( 0.936, -0.735, 1.080) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.110, 6.758, -3.296) ( -3.110, 6.758, -3.296) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 52 ( -0.101, -0.092, -0.176) ( -0.100, -0.090, -0.175) ( 0.01, 0.02, 0.01) bond ( 1.134, -2.431, 0.852) ( 1.134, -2.428, 0.852) ( 0.05, 0.10, 0.03) angle ( -3.696, -1.139, 1.674) ( -3.696, -1.138, 1.675) ( 0.01, 0.01, 0.03) strbnd ( -1.209, 1.211, -0.450) ( -1.209, 1.211, -0.450) ( 0.00, 0.00, 0.00) torsion ( -0.018, 0.060, 0.194) ( -0.018, 0.060, 0.194) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 3.689, 2.206, -2.447) ( 3.689, 2.206, -2.447) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 53 ( 0.304, -0.091, -0.474) ( 0.305, -0.090, -0.471) ( 0.04, 0.01, 0.12) @@ -9935,9 +10126,9 @@ angle ( 0.912, -4.148, 0.434) ( 0.913, -4.147, 0.434) ( 0.03, 0.01, 0.01) strbnd ( -0.362, -0.327, 0.331) ( -0.362, -0.327, 0.331) ( 0.00, 0.00, 0.00) torsion ( 0.427, -0.471, -0.145) ( 0.427, -0.471, -0.145) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.333, 4.990, -0.524) ( -0.333, 4.990, -0.524) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 54 ( 0.047, 0.327, 0.213) ( 0.048, 0.328, 0.216) ( 0.00, 0.04, 0.06) bond ( 0.044, 0.448, -1.022) ( 0.044, 0.449, -1.019) ( 0.00, 0.02, 0.28) angle ( -5.073, 4.709, 1.855) ( -5.072, 4.710, 1.855) ( 0.01, 0.01, 0.00) @@ -9945,39 +10136,39 @@ torsion ( 0.301, 0.513, 0.239) ( 0.301, 0.513, 0.239) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.463, -4.236, -0.352) ( 5.463, -4.236, -0.352) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 55 ( -0.139, -0.301, 0.325) ( -0.139, -0.299, 0.327) ( 0.01, 0.06, 0.06) bond ( 0.004, -0.058, -0.057) ( 0.004, -0.056, -0.056) ( 0.00, 0.01, 0.01) angle ( -0.993, 1.847, -1.929) ( -0.992, 1.847, -1.929) ( 0.07, 0.01, 0.01) strbnd ( -0.720, -1.271, 0.377) ( -0.720, -1.271, 0.377) ( 0.00, 0.00, 0.00) torsion ( 0.101, 0.125, -0.120) ( 0.101, 0.125, -0.120) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.469, -0.945, 2.055) ( 1.469, -0.944, 2.055) ( 0.01, 0.01, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 56 ( -0.037, -0.300, -0.241) ( -0.036, -0.299, -0.238) ( 0.00, 0.04, 0.06) bond ( 0.176, 1.777, -3.219) ( 0.177, 1.777, -3.216) ( 0.00, 0.04, 0.08) angle ( -1.373, -1.962, -1.160) ( -1.373, -1.962, -1.159) ( 0.05, 0.02, 0.01) strbnd ( -0.304, 0.067, 1.171) ( -0.304, 0.067, 1.171) ( 0.00, 0.00, 0.00) torsion ( -1.378, 0.531, 0.218) ( -1.378, 0.532, 0.218) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.841, -0.714, 2.749) ( 2.842, -0.714, 2.749) ( 0.01, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 57 ( 0.041, 0.148, -0.296) ( 0.041, 0.150, -0.294) ( 0.00, 0.03, 0.06) bond ( -0.135, 2.007, 2.146) ( -0.135, 2.009, 2.147) ( 0.00, 0.08, 0.08) angle ( 0.451, -0.692, 0.675) ( 0.452, -0.692, 0.675) ( 0.03, 0.02, 0.02) strbnd ( -0.177, -0.030, -0.939) ( -0.177, -0.030, -0.939) ( 0.00, 0.00, 0.00) torsion ( -1.075, -0.300, 0.213) ( -1.075, -0.300, 0.213) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.976, -0.838, -2.392) ( 0.976, -0.838, -2.392) ( 0.02, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 58 ( -0.254, 0.017, -0.064) ( -0.254, 0.019, -0.062) ( 0.02, 0.00, 0.02) bond ( -0.040, -1.500, 1.928) ( -0.040, -1.499, 1.930) ( 0.00, 0.08, 0.11) angle ( -1.136, 1.312, 0.995) ( -1.135, 1.312, 0.995) ( 0.05, 0.03, 0.02) strbnd ( 0.280, -0.457, -0.574) ( 0.280, -0.457, -0.574) ( 0.00, 0.00, 0.00) torsion ( 0.158, 0.214, 0.170) ( 0.158, 0.214, 0.170) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.484, 0.449, -2.583) ( 0.484, 0.449, -2.583) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 59 ( -0.039, 0.371, 0.524) ( -0.039, 0.373, 0.526) ( 0.00, 0.07, 0.11) bond ( 0.250, 2.246, -2.453) ( 0.250, 2.247, -2.451) ( 0.00, 0.07, 0.07) angle ( -0.227, 0.092, 0.062) ( -0.226, 0.092, 0.062) ( 0.01, 0.00, 0.00) @@ -9993,15 +10184,15 @@ torsion ( -1.382, 1.853, -0.948) ( -1.382, 1.853, -0.948) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.493, -2.052, -0.640) ( -2.493, -2.052, -0.640) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 61 ( -0.281, 0.189, -0.034) ( -0.280, 0.192, -0.033) ( 0.02, 0.06, 0.00) bond ( 0.133, -2.004, 0.580) ( 0.133, -2.001, 0.581) ( 0.00, 0.15, 0.02) angle ( 0.076, -0.444, -1.547) ( 0.077, -0.444, -1.546) ( 0.00, 0.00, 0.04) strbnd ( -0.121, -0.013, 0.295) ( -0.121, -0.013, 0.295) ( 0.00, 0.00, 0.00) torsion ( 0.940, 0.033, -0.103) ( 0.940, 0.033, -0.103) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.309, 2.616, 0.740) ( -1.309, 2.616, 0.740) ( 0.01, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 62 ( -0.037, 0.359, 0.037) ( -0.037, 0.362, 0.038) ( 0.00, 0.10, 0.00) bond ( -0.580, 1.889, -0.905) ( -0.580, 1.891, -0.905) ( 0.01, 0.13, 0.05) angle ( -0.273, 0.763, 1.769) ( -0.273, 0.763, 1.769) ( 0.01, 0.01, 0.02) @@ -10009,15 +10200,15 @@ torsion ( 1.294, 0.792, 0.827) ( 1.294, 0.792, 0.827) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.153, -3.573, -1.933) ( -0.153, -3.573, -1.933) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 63 ( -0.297, 0.195, 0.097) ( -0.296, 0.196, 0.100) ( 0.03, 0.01, 0.03) bond ( 0.610, 0.315, 1.633) ( 0.610, 0.315, 1.636) ( 0.02, 0.00, 0.18) angle ( -1.418, 1.386, 0.261) ( -1.418, 1.387, 0.261) ( 0.03, 0.03, 0.00) strbnd ( -0.282, 0.382, 0.365) ( -0.282, 0.382, 0.365) ( 0.00, 0.00, 0.00) torsion ( 0.426, 0.990, -0.350) ( 0.426, 0.990, -0.350) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.367, -2.878, -1.812) ( 0.367, -2.878, -1.812) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 64 ( 5.704, -0.249, 0.138) ( 5.704, -0.244, 0.139) ( 0.00, 0.13, 0.01) bond ( 0.052, 0.524, -0.141) ( 0.052, 0.529, -0.141) ( 0.00, 0.27, 0.01) angle ( 0.150, -0.836, -3.088) ( 0.150, -0.836, -3.088) ( 0.00, 0.00, 0.02) @@ -10031,7 +10222,7 @@ angle ( 0.082, -0.169, 2.424) ( 0.082, -0.169, 2.425) ( 0.00, 0.00, 0.02) strbnd ( 0.390, 0.135, -0.958) ( 0.390, 0.135, -0.958) ( 0.00, 0.00, 0.00) torsion ( -0.084, 0.524, 0.039) ( -0.084, 0.524, 0.039) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.216, 1.133, 7.265) ( -1.216, 1.133, 7.265) ( 0.00, 0.00, 0.00) electro ( 17.799, 1.709, -9.304) ( 17.799, 1.709, -9.304) ( 0.00, 0.00, 0.00) ok 14 # gradients @@ -10192,47 +10383,47 @@ angle (-15.891, -11.333, -5.837) (-15.890, -11.333, -5.837) ( 0.00, 0.00, 0.01) strbnd ( -1.046, 0.503, 0.436) ( -1.046, 0.503, 0.436) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.839, 1.264, 1.139) ( 0.839, 1.264, 1.139) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 20 ( -6.872, -6.628, -8.449) ( -6.870, -6.627, -8.448) ( 0.02, 0.01, 0.02) bond ( -7.287, 3.445, -8.054) ( -7.286, 3.445, -8.052) ( 0.02, 0.01, 0.02) angle ( -1.156, -10.327, -3.372) ( -1.156, -10.326, -3.372) ( 0.02, 0.01, 0.01) strbnd ( 1.415, -1.060, 1.430) ( 1.415, -1.060, 1.430) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.156, 1.313, 1.547) ( 0.156, 1.313, 1.547) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 21 ( -5.154, -11.419, -3.897) ( -5.153, -11.418, -3.895) ( 0.02, 0.01, 0.04) bond ( -5.951, -7.142, 6.246) ( -5.950, -7.141, 6.247) ( 0.02, 0.02, 0.02) angle ( -0.744, -6.990, -8.698) ( -0.743, -6.990, -8.698) ( 0.02, 0.00, 0.01) strbnd ( 1.377, 1.441, -1.809) ( 1.377, 1.441, -1.809) ( 0.00, 0.00, 0.00) - torsion ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.163, 1.273, 0.365) ( 0.163, 1.273, 0.365) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 22 ( 6.707, 14.950, -4.095) ( 6.709, 14.951, -4.094) ( 0.04, 0.00, 0.03) bond ( 10.180, 0.038, -5.182) ( 10.183, 0.038, -5.181) ( 0.02, 0.00, 0.01) angle ( -0.643, 16.864, -1.139) ( -0.642, 16.864, -1.139) ( 0.01, 0.00, 0.03) strbnd ( -2.565, 0.430, 1.327) ( -2.565, 0.430, 1.327) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.266, -2.382, 0.899) ( -0.266, -2.382, 0.899) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( 7.712, 7.044, 4.929) ( 7.712, 7.045, 4.931) ( 0.01, 0.01, 0.05) bond ( 2.115, 4.636, 9.930) ( 2.115, 4.637, 9.932) ( 0.01, 0.01, 0.02) angle ( 6.274, 3.725, -3.075) ( 6.274, 3.725, -3.075) ( 0.01, 0.01, 0.00) strbnd ( -0.199, -0.342, -1.642) ( -0.199, -0.342, -1.642) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.477, -0.975, -0.284) ( -0.477, -0.975, -0.284) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( 10.798, 13.827, -7.791) ( 10.799, 13.829, -7.790) ( 0.01, 0.01, 0.02) bond ( -5.076, 7.231, -5.839) ( -5.075, 7.232, -5.838) ( 0.01, 0.02, 0.02) angle ( 15.920, 8.574, -3.218) ( 15.920, 8.575, -3.218) ( 0.00, 0.00, 0.01) strbnd ( 0.876, -0.556, 0.755) ( 0.876, -0.556, 0.755) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.922, -1.422, 0.511) ( -0.922, -1.422, 0.511) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) ok 16 # gradients @@ -10858,17 +11049,173 @@ angle ( 5.569, -0.090, -0.056) ( 5.570, -0.090, -0.056) ( 0.01, 0.00, 0.00) strbnd ( 2.049, 1.116, 0.067) ( 2.049, 1.116, 0.067) ( 0.00, 0.00, 0.00) torsion ( 0.000, 0.000, -0.009) ( 0.000, 0.000, -0.009) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.791, -1.108, -0.087) ( -3.791, -1.108, -0.087) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 17 ( 3.734, 1.697, 3.317) ( 3.735, 1.697, 3.320) ( 0.03, 0.05, 0.08) bond ( -0.653, 0.424, 1.150) ( -0.653, 0.424, 1.152) ( 0.05, 0.01, 0.21) angle ( 4.116, 2.173, 1.530) ( 4.116, 2.174, 1.530) ( 0.01, 0.02, 0.01) strbnd ( 2.185, 0.599, -0.219) ( 2.185, 0.599, -0.219) ( 0.00, 0.00, 0.00) torsion ( 0.003, -0.008, 0.004) ( 0.003, -0.008, 0.004) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -1.916, -1.492, 0.852) ( -1.916, -1.492, 0.852) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +18 ( 3.357, 1.877, -3.735) ( 3.358, 1.877, -3.733) ( 0.04, 0.05, 0.07) + bond ( -0.951, 0.766, -1.640) ( -0.950, 0.766, -1.638) ( 0.07, 0.04, 0.14) + angle ( 4.217, 2.283, -1.378) ( 4.217, 2.284, -1.377) ( 0.01, 0.02, 0.01) + strbnd ( 2.195, 0.574, 0.319) ( 2.195, 0.574, 0.319) ( 0.00, 0.00, 0.00) + torsion ( -0.003, 0.007, 0.005) ( -0.003, 0.007, 0.005) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -2.102, -1.754, -1.042) ( -2.101, -1.754, -1.042) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +19 ( -0.949, 1.850, -2.966) ( -0.948, 1.851, -2.963) ( 0.08, 0.03, 0.10) + bond ( 0.687, 0.547, -1.969) ( 0.688, 0.547, -1.967) ( 0.02, 0.01, 0.15) + angle ( -2.117, 0.190, -0.687) ( -2.116, 0.190, -0.687) ( 0.02, 0.01, 0.01) + strbnd ( -1.351, -0.031, 0.069) ( -1.351, -0.031, 0.069) ( 0.00, 0.00, 0.00) + torsion ( -0.009, 1.445, 0.399) ( -0.009, 1.445, 0.399) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 1.840, -0.300, -0.777) ( 1.840, -0.300, -0.777) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +20 ( 3.215, -1.417, 1.360) ( 3.216, -1.414, 1.361) ( 0.03, 0.21, 0.04) + bond ( 0.757, -1.956, 0.504) ( 0.757, -1.953, 0.504) ( 0.03, 0.15, 0.01) + angle ( -2.944, -1.085, 0.217) ( -2.943, -1.085, 0.218) ( 0.02, 0.01, 0.01) + strbnd ( -1.362, 0.055, -0.006) ( -1.362, 0.055, -0.006) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.012, -0.046) ( -0.000, -0.012, -0.046) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 6.765, 1.580, 0.691) ( 6.765, 1.580, 0.691) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +21 ( 1.306, 2.523, 1.573) ( 1.307, 2.525, 1.575) ( 0.07, 0.07, 0.12) + bond ( 0.773, 1.536, 1.536) ( 0.773, 1.538, 1.538) ( 0.03, 0.10, 0.10) + angle ( -2.380, 0.642, 0.554) ( -2.380, 0.642, 0.554) ( 0.02, 0.02, 0.01) + strbnd ( -1.349, -0.045, -0.017) ( -1.349, -0.045, -0.017) ( 0.00, 0.00, 0.00) + torsion ( -0.038, 1.895, -1.876) ( -0.038, 1.895, -1.876) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 4.301, -1.506, 1.375) ( 4.301, -1.506, 1.375) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +22 ( -3.084, 0.782, 1.224) ( -3.081, 0.783, 1.225) ( 0.08, 0.05, 0.13) + bond ( -1.870, -0.110, 1.417) ( -1.868, -0.110, 1.418) ( 0.12, 0.00, 0.09) + angle ( 0.520, -2.593, 0.484) ( 0.520, -2.593, 0.484) ( 0.01, 0.02, 0.01) + strbnd ( 0.654, -1.205, 0.011) ( 0.654, -1.205, 0.011) ( 0.00, 0.00, 0.00) + torsion ( -1.641, -0.927, -2.234) ( -1.641, -0.927, -2.234) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.746, 5.617, 1.547) ( -0.746, 5.617, 1.547) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +23 ( -2.117, 4.656, 0.658) ( -2.116, 4.658, 0.658) ( 0.09, 0.05, 0.05) + bond ( 1.483, 1.776, 0.765) ( 1.485, 1.778, 0.766) ( 0.09, 0.10, 0.03) + angle ( 2.624, -2.307, 0.268) ( 2.625, -2.307, 0.268) ( 0.01, 0.01, 0.01) + strbnd ( 0.634, -1.241, -0.006) ( 0.634, -1.242, -0.006) ( 0.00, 0.00, 0.00) + torsion ( 0.579, 0.295, -1.806) ( 0.579, 0.295, -1.806) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -7.437, 6.134, 1.436) ( -7.437, 6.134, 1.436) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +24 ( -0.478, -1.559, -3.030) ( -0.478, -1.559, -3.027) ( 0.03, 0.04, 0.10) + bond ( -0.615, 0.404, -1.895) ( -0.615, 0.404, -1.892) ( 0.02, 0.01, 0.16) + angle ( 0.873, -1.806, -0.669) ( 0.873, -1.806, -0.669) ( 0.04, 0.03, 0.01) + strbnd ( 0.665, -1.206, 0.041) ( 0.665, -1.206, 0.041) ( 0.00, 0.00, 0.00) + torsion ( -0.889, -0.485, 0.185) ( -0.890, -0.485, 0.185) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.512, 1.534, -0.692) ( -0.512, 1.534, -0.692) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +ok 20 # gradients +ok 21 # energy +---------------------------------------------------------------------------------------- + + VALIDATE GRADIENTS : /Volumes/Home/ghutchis/Desktop/UFF/cholesterol.gpr + + +ATOM IDX NUMERICAL GRADIENT ANALYTICAL GRADIENT REL. ERROR (%) +---------------------------------------------------------------------------------------- + 1 ( 0.967, 0.259, -0.197) ( 0.972, 0.264, -0.191) ( 0.49, 0.14, 0.12) + bond ( 0.905, 2.623, 8.120) ( 0.909, 2.627, 8.124) ( 0.37, 0.15, 0.05) + angle ( 7.385, 0.772, -9.892) ( 7.388, 0.774, -9.889) ( 0.03, 0.16, 0.02) + strbnd ( 0.181, 1.490, -0.840) ( 0.180, 1.489, -0.841) ( 0.02, 0.06, 0.05) + torsion ( -3.658, -1.057, 2.616) ( -3.658, -1.057, 2.616) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -3.221, -3.068, -0.045) ( -3.221, -3.068, -0.045) ( 0.00, 0.00, 0.00) + electro ( -0.625, -0.501, -0.156) ( -0.625, -0.501, -0.156) ( 0.00, 0.00, 0.00) + 2 ( 0.736, 0.034, 0.004) ( 0.742, 0.039, 0.010) ( 0.41, 0.02, 0.00) + bond ( 11.123, -1.351, -2.048) ( 11.127, -1.347, -2.044) ( 0.04, 0.29, 0.21) + angle ( -8.045, 1.278, 9.737) ( -8.043, 1.280, 9.739) ( 0.03, 0.16, 0.02) + strbnd ( 0.965, -2.280, 1.631) ( 0.965, -2.281, 1.630) ( 0.07, 0.04, 0.02) + torsion ( 4.294, 0.736, -3.479) ( 4.294, 0.736, -3.478) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -7.601, 1.652, -5.836) ( -7.601, 1.652, -5.836) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 3 ( 0.562, 0.076, -0.092) ( 0.566, 0.081, -0.087) ( 0.27, 0.04, 0.05) + bond ( 6.097, -9.677, 17.390) ( 6.101, -9.673, 17.394) ( 0.06, 0.04, 0.02) + angle ( -1.378, 4.252, -13.110) ( -1.376, 4.254, -13.108) ( 0.15, 0.05, 0.02) + strbnd ( 0.257, 0.181, -0.552) ( 0.256, 0.180, -0.552) ( 0.03, 0.01, 0.03) + torsion ( -0.355, 2.764, 0.802) ( -0.355, 2.764, 0.802) ( 0.00, 0.00, 0.01) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -4.059, 2.557, -4.623) ( -4.059, 2.557, -4.623) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 4 ( 1.701, 0.453, 0.308) ( 1.706, 0.472, 0.382) ( 0.30, 0.89, 2.27) + bond ( 8.642, 10.885, -8.146) ( 8.646, 10.889, -8.142) ( 0.04, 0.04, 0.05) + angle ( -7.598, -8.113, 12.883) ( -7.596, -8.111, 12.884) ( 0.03, 0.02, 0.01) + strbnd ( -1.384, 1.903, -1.050) ( -1.385, 1.903, -1.050) ( 0.08, 0.03, 0.05) + torsion ( 3.685, 2.177, -4.847) ( 3.685, 2.177, -4.846) ( 0.00, 0.00, 0.00) + oop ( -0.002, -0.088, -0.446) ( -0.002, -0.075, -0.377) ( 0.00, 0.12, 3.03) + vdw ( -1.895, -6.707, 1.430) ( -1.894, -6.706, 1.430) ( 0.00, 0.00, 0.00) + electro ( 0.253, 0.395, 0.484) ( 0.253, 0.395, 0.484) ( 0.00, 0.00, 0.00) + 5 ( -7.881, 4.561, -0.394) ( -7.870, 4.527, -0.600) ( 0.14, 0.76, 8.12) + bond (-12.705, 14.137, -1.636) (-12.697, 14.141, -1.636) ( 0.06, 0.03, 0.02) + angle ( 1.253, 3.126, -9.477) ( 1.254, 3.128, -9.476) ( 0.12, 0.05, 0.01) + strbnd ( 1.419, -3.117, 0.027) ( 1.419, -3.117, 0.027) ( 0.04, 0.02, 0.00) + torsion ( -0.255, 1.581, 7.797) ( -0.255, 1.581, 7.798) ( 0.00, 0.00, 0.01) + oop ( -0.011, 0.244, 1.272) ( -0.008, 0.203, 1.063) ( 0.00, 0.98, 16.38) + vdw ( 0.999, -11.742, 1.783) ( 0.999, -11.742, 1.783) ( 0.02, 0.00, 0.00) + electro ( 1.419, 0.332, -0.159) ( 1.419, 0.332, -0.159) ( 0.00, 0.00, 0.00) + 6 ( 8.807, -4.640, 1.194) ( 8.816, -4.626, 1.216) ( 0.11, 0.29, 1.77) + bond ( 3.884, 4.853, -0.204) ( 3.892, 4.858, -0.204) ( 0.19, 0.11, 0.01) + angle ( 1.621, -0.921, 2.154) ( 1.622, -0.919, 2.155) ( 0.08, 0.16, 0.02) + strbnd ( -1.690, 1.656, -0.349) ( -1.691, 1.655, -0.349) ( 0.04, 0.03, 0.00) + torsion ( -0.062, -0.722, -2.668) ( -0.062, -0.722, -2.667) ( 0.00, 0.00, 0.04) + oop ( -0.011, -0.030, -0.074) ( -0.010, -0.023, -0.055) ( 0.00, 0.02, 0.14) + vdw ( 4.938, -9.590, 2.718) ( 4.938, -9.589, 2.718) ( 0.00, 0.00, 0.00) + electro ( 0.127, 0.114, -0.383) ( 0.127, 0.114, -0.383) ( 0.00, 0.00, 0.00) + 7 ( -0.810, 0.444, -0.283) ( -0.806, 0.452, -0.254) ( 0.32, 0.37, 0.83) + bond (-11.282, 11.208, 0.541) (-11.278, 11.212, 0.545) ( 0.04, 0.03, 0.24) + angle ( 9.286, -4.053, -3.402) ( 9.288, -4.051, -3.400) ( 0.02, 0.05, 0.04) + strbnd ( 0.811, -0.072, -0.853) ( 0.810, -0.073, -0.854) ( 0.06, 0.01, 0.03) + torsion ( -1.331, -0.869, 0.696) ( -1.331, -0.869, 0.696) ( 0.00, 0.00, 0.02) + oop ( 0.009, -0.020, -0.131) ( 0.007, -0.017, -0.108) ( 0.00, 0.01, 0.31) + vdw ( 0.881, -5.592, 2.703) ( 0.881, -5.592, 2.703) ( 0.01, 0.00, 0.00) + electro ( 0.815, -0.158, 0.163) ( 0.815, -0.158, 0.163) ( 0.00, 0.00, 0.00) + 8 ( 0.736, 0.178, 0.067) ( 0.740, 0.183, 0.072) ( 0.35, 0.09, 0.04) + bond ( -1.261, -2.729, -19.147) ( -1.258, -2.725, -19.143) ( 0.27, 0.13, 0.02) + angle ( -9.942, 7.503, 26.405) ( -9.940, 7.505, 26.407) ( 0.02, 0.03, 0.01) + strbnd ( 4.138, 2.113, 0.872) ( 4.137, 2.112, 0.871) ( 0.02, 0.04, 0.03) + torsion ( 2.267, -2.809, -7.166) ( 2.267, -2.809, -7.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 5.533, -3.900, -0.897) ( 5.533, -3.899, -0.897) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 9 ( 0.364, 0.232, -0.008) ( 0.369, 0.237, -0.002) ( 0.20, 0.11, 0.00) + bond ( -6.983, 11.163, 5.799) ( -6.980, 11.166, 5.803) ( 0.06, 0.03, 0.07) + angle ( 6.589, 0.564, -10.864) ( 6.592, 0.566, -10.862) ( 0.04, 0.12, 0.02) + strbnd ( -4.331, -9.696, 0.323) ( -4.332, -9.697, 0.323) ( 0.02, 0.01, 0.01) + torsion ( 0.192, 1.536, 1.287) ( 0.192, 1.536, 1.287) ( 0.00, 0.00, 0.01) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 4.897, -3.334, 3.446) ( 4.897, -3.334, 3.447) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +10 ( 0.279, 0.320, 0.215) ( 0.284, 0.326, 0.221) ( 0.13, 0.18, 0.13) + bond ( 3.926, 16.947, -8.842) ( 3.929, 16.951, -8.838) ( 0.09, 0.02, 0.05) + angle ( -6.642, -8.727, 8.491) ( -6.640, -8.725, 8.493) ( 0.03, 0.02, 0.02) + strbnd ( -1.913, -4.925, 2.830) ( -1.914, -4.925, 2.830) ( 0.05, 0.01, 0.02) + torsion ( -1.013, -0.173, -1.195) ( -1.013, -0.173, -1.195) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 5.922, -2.802, -1.070) ( 5.922, -2.802, -1.070) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +11 ( 0.045, 0.535, 0.496) ( 0.051, 0.539, 0.502) ( 0.03, 0.24, 0.29) + bond (-22.008, -2.471, -8.891) (-22.004, -2.468, -8.886) ( 0.02, 0.14, 0.05) + angle ( 15.128, 5.024, 5.636) ( 15.130, 5.026, 5.638) ( 0.01, 0.04, 0.03) + strbnd ( 6.334, 1.549, 3.089) ( 6.333, 1.548, 3.089) ( 0.01, 0.06, 0.02) + torsion ( -1.616, 1.448, 1.166) ( -1.616, 1.448, 1.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 2.209, -5.015, -0.504) ( 2.209, -5.015, -0.504) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +12 ( 0.018, -0.028, -0.133) ( 0.022, -0.023, -0.128) ( 0.01, 0.01, 0.07) -225/229 Test #183: test_ffmmff94_5 ..................***Timeout 1500.05 sec +225/229 Test #183: test_ffmmff94_5 ..................***Timeout 1500.12 sec # Testing MMFF94 Force Field... ok 1 # energy ---------------------------------------------------------------------------------------- @@ -10947,7 +11294,7 @@ angle ( 2.902, 2.092, -7.874) ( 2.904, 2.094, -7.872) ( 0.05, 0.09, 0.03) strbnd ( -1.490, -4.290, 5.538) ( -1.491, -4.290, 5.537) ( 0.03, 0.02, 0.02) torsion ( 1.310, 0.148, 0.500) ( 1.310, 0.148, 0.500) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.133, 6.426, -2.475) ( -1.133, 6.427, -2.475) ( 0.00, 0.00, 0.00) electro ( 0.040, -0.039, -0.079) ( 0.040, -0.039, -0.079) ( 0.00, 0.00, 0.00) 10 ( 0.625, -1.053, -0.035) ( 0.652, -1.028, -0.117) ( 1.68, 2.30, 0.29) @@ -11051,7 +11398,7 @@ angle ( -1.279, 0.117, 4.947) ( -1.278, 0.117, 4.948) ( 0.03, 0.00, 0.01) strbnd ( -1.175, -1.676, -0.163) ( -1.175, -1.676, -0.163) ( 0.00, 0.01, 0.00) torsion ( -0.017, 0.448, -2.440) ( -0.017, 0.448, -2.440) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.912, 10.758, -1.469) ( -5.912, 10.758, -1.469) ( 0.00, 0.00, 0.00) electro ( 2.494, -0.076, -0.023) ( 2.494, -0.076, -0.023) ( 0.00, 0.00, 0.00) 23 ( 1.691, 0.137, 0.101) ( 1.691, 0.137, 0.111) ( 0.01, 0.00, 0.10) @@ -11067,15 +11414,15 @@ angle ( 0.284, -0.374, -2.715) ( 0.285, -0.374, -2.714) ( 0.02, 0.00, 0.02) strbnd ( -0.744, -0.761, 0.185) ( -0.744, -0.761, 0.185) ( 0.00, 0.00, 0.00) torsion ( -0.625, 0.065, -0.401) ( -0.625, 0.065, -0.401) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.476, -1.332, 4.015) ( -0.476, -1.332, 4.015) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 25 ( -0.216, 0.307, 0.417) ( -0.215, 0.308, 0.419) ( 0.03, 0.03, 0.10) bond ( -0.012, -0.007, -0.021) ( -0.011, -0.007, -0.018) ( 0.00, 0.00, 0.00) angle ( -1.034, 6.306, -1.664) ( -1.034, 6.306, -1.664) ( 0.04, 0.01, 0.01) strbnd ( -0.562, 0.219, 0.095) ( -0.562, 0.219, 0.095) ( 0.00, 0.00, 0.00) torsion ( -0.037, -1.134, 0.433) ( -0.037, -1.134, 0.433) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.429, -5.077, 1.574) ( 1.429, -5.077, 1.574) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -0.284, -0.046, -0.073) ( -0.283, -0.045, -0.071) ( 0.02, 0.01, 0.02) @@ -11085,39 +11432,39 @@ torsion ( -0.063, 0.000, -0.019) ( -0.063, 0.000, -0.019) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.284, 6.636, -7.210) ( 1.284, 6.636, -7.210) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 27 ( -0.055, 0.024, 0.090) ( -0.053, 0.026, 0.091) ( 0.01, 0.00, 0.01) bond ( 0.526, -0.388, 0.144) ( 0.528, -0.387, 0.144) ( 0.11, 0.04, 0.00) angle ( 0.050, -0.042, -0.294) ( 0.050, -0.042, -0.294) ( 0.00, 0.00, 0.02) strbnd ( -0.519, -0.146, 0.412) ( -0.519, -0.147, 0.412) ( 0.00, 0.00, 0.00) torsion ( 0.024, 0.049, 0.043) ( 0.024, 0.049, 0.043) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.136, 0.552, -0.214) ( -0.136, 0.552, -0.214) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( 0.017, -0.066, -0.165) ( 0.019, -0.065, -0.164) ( 0.00, 0.01, 0.01) bond ( -0.618, -0.478, -0.203) ( -0.616, -0.477, -0.203) ( 0.12, 0.06, 0.00) angle ( 0.508, -0.622, -0.082) ( 0.508, -0.622, -0.081) ( 0.01, 0.02, 0.00) strbnd ( 0.062, -0.250, 0.582) ( 0.062, -0.250, 0.582) ( 0.00, 0.00, 0.00) torsion ( 0.032, -0.035, -0.016) ( 0.032, -0.035, -0.016) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.032, 1.319, -0.446) ( 0.032, 1.319, -0.446) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 29 ( -0.042, 0.017, 0.205) ( -0.040, 0.019, 0.206) ( 0.01, 0.00, 0.03) bond ( 0.190, -0.138, 0.157) ( 0.192, -0.137, 0.158) ( 0.03, 0.01, 0.02) angle ( -1.278, -5.641, -3.328) ( -1.277, -5.640, -3.328) ( 0.02, 0.01, 0.01) strbnd ( -0.058, -0.697, 0.159) ( -0.058, -0.697, 0.159) ( 0.00, 0.00, 0.00) torsion ( -0.378, 0.160, 0.596) ( -0.378, 0.160, 0.596) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.482, 6.333, 2.621) ( 1.482, 6.333, 2.621) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 30 ( 0.055, -0.028, 0.141) ( 0.056, -0.027, 0.144) ( 0.01, 0.00, 0.03) bond ( -0.443, -0.386, 0.756) ( -0.442, -0.386, 0.759) ( 0.03, 0.02, 0.16) angle ( -0.262, -0.474, -0.393) ( -0.261, -0.474, -0.393) ( 0.01, 0.02, 0.01) strbnd ( -0.413, -0.294, -0.338) ( -0.413, -0.294, -0.338) ( 0.00, 0.00, 0.00) torsion ( 0.017, -0.020, -0.001) ( 0.017, -0.020, -0.001) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.156, 1.146, 0.117) ( 1.156, 1.146, 0.117) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 31 ( -0.052, 0.041, 0.085) ( -0.051, 0.043, 0.086) ( 0.01, 0.01, 0.01) bond ( 0.468, -0.992, -0.774) ( 0.469, -0.990, -0.773) ( 0.02, 0.18, 0.09) angle ( -4.788, 0.065, -2.987) ( -4.788, 0.065, -2.987) ( 0.01, 0.00, 0.01) @@ -11125,31 +11472,31 @@ torsion ( 0.095, -0.413, 0.587) ( 0.095, -0.413, 0.587) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.954, 1.137, 2.990) ( 4.954, 1.137, 2.990) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 32 ( 0.029, -0.014, -0.100) ( 0.031, -0.012, -0.100) ( 0.01, 0.00, 0.01) bond ( 0.990, 1.125, 0.207) ( 0.992, 1.126, 0.207) ( 0.14, 0.17, 0.00) angle ( 3.214, -2.731, -0.541) ( 3.214, -2.730, -0.540) ( 0.01, 0.01, 0.02) strbnd ( 0.051, -0.498, -0.006) ( 0.050, -0.498, -0.006) ( 0.00, 0.00, 0.00) torsion ( -0.050, -0.015, 0.320) ( -0.050, -0.015, 0.320) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -4.176, 2.106, -0.080) ( -4.176, 2.106, -0.080) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 33 ( 0.011, 0.007, -0.103) ( 0.012, 0.009, -0.100) ( 0.00, 0.00, 0.02) bond ( 0.411, -0.710, -1.123) ( 0.412, -0.709, -1.121) ( 0.01, 0.06, 0.20) angle ( 2.741, 1.372, 0.138) ( 2.741, 1.373, 0.138) ( 0.02, 0.03, 0.00) strbnd ( 0.276, -0.000, 0.286) ( 0.276, -0.000, 0.286) ( 0.00, 0.00, 0.00) torsion ( -0.286, -0.647, 0.304) ( -0.286, -0.647, 0.304) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.131, -0.007, 0.292) ( -3.131, -0.007, 0.292) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 34 ( 0.075, -0.007, -0.103) ( 0.076, -0.006, -0.101) ( 0.00, 0.00, 0.02) bond ( 0.035, -0.551, 0.735) ( 0.035, -0.550, 0.737) ( 0.00, 0.07, 0.16) angle ( 1.556, 0.759, 0.492) ( 1.556, 0.759, 0.493) ( 0.03, 0.02, 0.01) strbnd ( 0.359, -0.089, -0.017) ( 0.359, -0.089, -0.017) ( 0.00, 0.00, 0.00) torsion ( -0.120, -0.433, -0.317) ( -0.120, -0.433, -0.317) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.755, 0.308, -0.996) ( -1.755, 0.308, -0.996) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 35 ( 1.245, -1.321, 0.243) ( 1.246, -1.318, 0.245) ( 0.14, 0.22, 0.04) bond ( 0.213, 0.288, -0.021) ( 0.214, 0.290, -0.021) ( 0.03, 0.07, 0.00) angle ( 0.833, -0.601, 0.186) ( 0.834, -0.601, 0.186) ( 0.04, 0.01, 0.00) @@ -11214,7 +11561,7 @@ torsion ( 0.001, 0.000, -0.005) ( 0.001, 0.000, -0.004) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.000, -0.001) ( 0.000, 0.000, -0.001) ( 0.00, 0.00, 0.00) vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 3 ( 0.889, 0.122, 0.242) ( 0.890, 0.124, 0.242) ( 0.13, 0.03, 0.01) bond ( 1.119, 1.704, 0.350) ( 1.120, 1.706, 0.350) ( 0.10, 0.15, 0.00) angle ( 1.146, -0.809, 0.277) ( 1.146, -0.809, 0.277) ( 0.03, 0.02, 0.00) @@ -11250,9 +11597,9 @@ 7 ( 0.265, 0.865, 0.092) ( 0.269, 0.873, 0.093) ( 0.11, 0.67, 0.01) bond ( 0.245, 0.341, 0.076) ( 0.249, 0.348, 0.077) ( 0.10, 0.26, 0.00) angle ( -0.389, 0.299, -0.100) ( -0.389, 0.299, -0.099) ( 0.01, 0.00, 0.00) - strbnd ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + strbnd ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.646, 0.581, 0.189) ( 0.646, 0.581, 0.189) ( 0.00, 0.00, 0.00) electro ( -0.237, -0.356, -0.074) ( -0.237, -0.356, -0.074) ( 0.00, 0.00, 0.00) ok 4 # gradients @@ -11278,7 +11625,7 @@ strbnd ( -8.362, -5.365, 9.214) ( -8.362, -5.366, 9.212) ( 0.01, 0.01, 0.02) torsion ( -0.008, -0.021, -0.086) ( -0.008, -0.021, -0.086) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.026, 0.015) ( 0.000, 0.022, 0.012) ( 0.00, 0.01, 0.00) - vdw ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 3 ( -2.634, 4.586, -7.960) ( -2.632, 4.583, -7.958) ( 0.10, 0.07, 0.03) bond ( -1.795, -1.762, 3.022) ( -1.793, -1.760, 3.028) ( 0.11, 0.11, 0.18) @@ -11317,7 +11664,7 @@ angle ( 1.553, -0.437, 0.860) ( 1.553, -0.437, 0.860) ( 0.03, 0.00, 0.04) strbnd ( 0.368, 0.645, -0.047) ( 0.368, 0.645, -0.047) ( 0.00, 0.00, 0.00) torsion ( -0.015, 0.001, -0.149) ( -0.015, 0.001, -0.149) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.977, -0.460, -0.633) ( -1.977, -0.460, -0.633) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 8 ( -0.053, 0.067, 0.183) ( -0.052, 0.068, 0.186) ( 0.00, 0.01, 0.05) @@ -11325,7 +11672,7 @@ angle ( 1.567, -0.533, 0.815) ( 1.568, -0.532, 0.815) ( 0.03, 0.02, 0.01) strbnd ( 0.370, -0.276, -0.582) ( 0.370, -0.276, -0.582) ( 0.00, 0.00, 0.00) torsion ( -0.016, 0.130, -0.075) ( -0.016, 0.130, -0.075) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.992, 0.775, 0.081) ( -1.992, 0.775, 0.081) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 9 ( 0.179, -0.202, 0.342) ( 0.180, -0.201, 0.344) ( 0.02, 0.02, 0.08) @@ -11350,7 +11697,7 @@ angle ( 1.859, -4.639, 2.751) ( 1.861, -4.637, 2.752) ( 0.10, 0.04, 0.06) strbnd ( 0.352, -0.450, 0.642) ( 0.351, -0.450, 0.641) ( 0.05, 0.03, 0.04) torsion ( -0.296, -0.439, 0.009) ( -0.296, -0.439, 0.009) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.689, 2.322, 0.608) ( 5.689, 2.322, 0.608) ( 0.00, 0.00, 0.00) electro ( -0.570, 0.183, -0.250) ( -0.570, 0.183, -0.250) ( 0.00, 0.00, 0.00) 2 ( -0.776, -0.622, -0.218) ( -0.780, -0.606, -0.189) ( 0.23, 0.97, 0.62) @@ -11366,7 +11713,7 @@ angle ( -5.704, 0.511, -1.299) ( -5.703, 0.511, -1.299) ( 0.01, 0.00, 0.04) strbnd ( -0.435, 0.449, -0.226) ( -0.435, 0.449, -0.226) ( 0.00, 0.00, 0.00) torsion ( -0.156, -0.037, 0.231) ( -0.156, -0.037, 0.231) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 6.326, -2.115, 0.844) ( 6.326, -2.115, 0.844) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 4 ( -0.154, -0.035, 0.283) ( -0.151, -0.034, 0.284) ( 0.04, 0.00, 0.03) @@ -11382,7 +11729,7 @@ angle ( -1.188, -0.996, 0.154) ( -1.187, -0.996, 0.154) ( 0.05, 0.05, 0.00) strbnd ( -0.441, 0.249, -0.473) ( -0.441, 0.249, -0.473) ( 0.00, 0.00, 0.00) torsion ( 0.429, 0.568, -0.091) ( 0.429, 0.568, -0.091) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.975, 0.076, 0.758) ( 0.975, 0.076, 0.758) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 6 ( 0.815, 1.141, -0.215) ( 0.856, 1.101, -0.316) ( 3.35, 3.49, 2.17) @@ -11424,13 +11771,13 @@ strbnd ( -3.294, 4.646, -8.104) ( -3.295, 4.645, -8.105) ( 0.02, 0.01, 0.01) torsion ( -0.194, 0.135, -0.238) ( -0.194, 0.135, -0.238) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 2 ( -9.933, -2.704, 4.639) ( -9.929, -2.699, 4.644) ( 0.04, 0.19, 0.11) bond (-13.151, 0.001, 0.002) (-13.148, 0.005, 0.006) ( 0.03, 0.00, 0.00) angle ( -5.431, -2.186, 3.739) ( -5.429, -2.184, 3.741) ( 0.03, 0.08, 0.04) strbnd ( 4.098, -2.031, 3.530) ( 4.097, -2.031, 3.529) ( 0.04, 0.02, 0.01) - torsion ( 0.000, 0.166, -0.285) ( 0.000, 0.166, -0.285) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.166, -0.285) ( 0.000, 0.166, -0.285) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.551, 1.346, -2.346) ( 4.551, 1.346, -2.346) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -11462,7 +11809,7 @@ bond ( -9.334, -13.210, 22.872) ( -9.334, -13.209, 22.874) ( 0.00, 0.01, 0.01) angle ( 1.828, -0.303, 0.571) ( 1.829, -0.302, 0.572) ( 0.02, 0.01, 0.01) strbnd ( -1.910, 0.171, -0.295) ( -1.910, 0.171, -0.295) ( 0.00, 0.00, 0.00) - torsion ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.183, 0.066, -0.115) ( 0.183, 0.066, -0.115) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -11476,7 +11823,7 @@ electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 8 ( 27.568, -1.841, -1.569) ( 27.570, -1.840, -1.569) ( 0.01, 0.04, 0.04) bond ( 28.025, -0.000, -0.000) ( 28.028, 0.000, 0.000) ( 0.01, 0.00, 0.00) - angle ( 0.000, -1.856, -0.010) ( 0.000, -1.856, -0.009) ( 0.00, 0.03, 0.00) + angle ( -0.000, -1.856, -0.010) ( 0.000, -1.856, -0.009) ( 0.00, 0.03, 0.00) strbnd ( 0.304, 1.915, -0.000) ( 0.304, 1.915, -0.000) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.469) ( 0.000, 0.000, -0.469) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -11537,7 +11884,7 @@ strbnd ( 20.845, -29.505, 51.044) ( 20.845, -29.506, 51.044) ( 0.00, 0.00, 0.00) torsion ( -0.002, -0.001, -0.002) ( -0.002, -0.001, -0.002) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 2 (267.229, 1.097, -1.985) (267.239, 1.101, -1.981) ( 0.00, 0.37, 0.20) bond (324.092, 0.002, 0.003) (324.102, 0.005, 0.006) ( 0.00, 0.00, 0.00) @@ -11567,7 +11914,7 @@ bond ( -9.351, 26.406, -0.000) ( -9.351, 26.409, 0.000) ( 0.00, 0.01, 0.00) angle ( 2.316, 0.820, -0.007) ( 2.316, 0.820, -0.006) ( 0.02, 0.00, 0.00) strbnd ( 13.869, 5.072, 0.000) ( 13.869, 5.072, 0.000) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.187, 1.385, -0.040) ( 7.187, 1.385, -0.040) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -11575,7 +11922,7 @@ bond ( -9.334, -13.210, 22.872) ( -9.334, -13.209, 22.874) ( 0.00, 0.01, 0.01) angle ( 2.371, -0.399, 0.737) ( 2.371, -0.398, 0.737) ( 0.02, 0.01, 0.01) strbnd ( 13.871, -2.534, 4.389) ( 13.871, -2.534, 4.389) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.183, 0.066, -0.115) ( 0.183, 0.066, -0.115) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -11583,7 +11930,7 @@ bond ( -9.329, -13.205, -22.882) ( -9.329, -13.205, -22.880) ( 0.00, 0.01, 0.01) angle ( 2.378, -0.394, -0.743) ( 2.378, -0.394, -0.742) ( 0.02, 0.01, 0.01) strbnd ( 13.873, -2.530, -4.384) ( 13.873, -2.530, -4.384) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.001, 0.000) ( 0.000, -0.001, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, -0.001, 0.000) ( 0.000, -0.001, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.238, -0.665, -1.230) ( 7.238, -0.665, -1.230) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -11817,17 +12164,17 @@ angle ( -9.008, -1.801, 6.507) ( -9.006, -1.799, 6.508) ( 0.02, 0.10, 0.03) strbnd ( 0.507, -2.141, 2.316) ( 0.507, -2.141, 2.315) ( 0.04, 0.02, 0.03) torsion ( 0.379, 2.149, -1.075) ( 0.379, 2.149, -1.075) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.389, 4.398, 0.864) ( -2.389, 4.398, 0.864) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( -0.056, -0.173, -0.298) ( -0.051, -0.167, -0.292) ( 0.03, 0.09, 0.18) bond ( -9.863, -5.250, 2.250) ( -9.858, -5.246, 2.255) ( 0.04, 0.08, 0.21) angle ( 12.507, 0.572, 0.600) ( 12.509, 0.573, 0.602) ( 0.02, 0.10, 0.10) strbnd ( 0.608, -3.802, 1.723) ( 0.607, -3.803, 1.722) ( 0.05, 0.02, 0.03) torsion ( -1.338, 1.223, -0.733) ( -1.338, 1.223, -0.733) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.970, 7.085, -4.139) ( -1.970, 7.085, -4.139) ( 0.01, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( -2.968, -0.603, -1.089) ( -2.963, -0.598, -1.087) ( 0.17, 0.31, 0.24) bond ( -0.866, -18.509, 3.882) ( -0.862, -18.505, 3.887) ( 0.40, 0.02, 0.12) angle ( 5.959, 26.024, -8.109) ( 5.962, 26.026, -8.108) ( 0.04, 0.01, 0.02) @@ -11841,15 +12188,15 @@ angle ( -5.572, -18.333, 5.423) ( -5.570, -18.330, 5.425) ( 0.04, 0.01, 0.03) strbnd ( -1.114, -2.631, -0.165) ( -1.115, -2.631, -0.166) ( 0.10, 0.02, 0.00) torsion ( 3.318, -0.490, -3.647) ( 3.318, -0.490, -3.647) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.225, 9.078, -0.852) ( 7.225, 9.078, -0.852) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -2.572, 0.175, -0.401) ( -2.567, 0.181, -0.395) ( 0.18, 0.10, 0.23) bond ( 4.426, -15.861, -0.954) ( 4.429, -15.857, -0.949) ( 0.08, 0.03, 0.45) angle ( -8.266, 12.873, -7.689) ( -8.264, 12.875, -7.687) ( 0.02, 0.02, 0.03) strbnd ( 1.193, 5.294, 4.137) ( 1.192, 5.293, 4.136) ( 0.07, 0.01, 0.03) torsion ( -0.164, -0.701, 3.652) ( -0.164, -0.701, 3.652) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.542, -1.377, 0.272) ( -0.542, -1.377, 0.272) ( 0.01, 0.00, 0.00) electro ( 0.781, -0.052, 0.181) ( 0.781, -0.052, 0.181) ( 0.00, 0.00, 0.00) 27 ( -0.131, 0.200, 0.315) ( -0.126, 0.205, 0.322) ( 0.06, 0.11, 0.19) @@ -11857,15 +12204,15 @@ angle ( -2.830, -11.271, 1.923) ( -2.828, -11.269, 1.924) ( 0.07, 0.02, 0.10) strbnd ( 1.105, -0.095, 0.631) ( 1.104, -0.095, 0.630) ( 0.10, 0.01, 0.02) torsion ( 1.263, -4.544, -4.977) ( 1.263, -4.544, -4.977) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.574, 1.387, 1.663) ( 1.574, 1.387, 1.663) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( -7.675, -0.990, 1.850) ( -7.670, -0.984, 1.855) ( 0.07, 0.60, 0.26) bond ( -2.953, -11.140, 2.764) ( -2.949, -11.136, 2.768) ( 0.12, 0.04, 0.15) angle ( -6.707, 11.635, 3.591) ( -6.705, 11.637, 3.594) ( 0.03, 0.02, 0.06) strbnd ( 1.933, -1.383, -4.721) ( 1.932, -1.383, -4.722) ( 0.05, 0.02, 0.03) torsion ( -0.767, 1.045, 0.680) ( -0.767, 1.045, 0.680) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.685, -1.579, 0.134) ( -1.684, -1.579, 0.134) ( 0.01, 0.00, 0.00) electro ( 2.504, 0.432, -0.598) ( 2.504, 0.432, -0.598) ( 0.00, 0.00, 0.00) 29 ( -0.232, -0.372, -1.097) ( -0.323, -0.236, -1.026) ( 2.10, 5.04, 6.49) @@ -11905,7 +12252,7 @@ angle ( 8.749, -2.680, 5.549) ( 8.750, -2.680, 5.550) ( 0.01, 0.01, 0.02) strbnd ( 0.282, -2.395, -3.567) ( 0.282, -2.395, -3.567) ( 0.00, 0.00, 0.01) torsion ( -0.756, 0.926, -0.619) ( -0.756, 0.926, -0.619) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.059, 4.362, 2.702) ( 2.059, 4.362, 2.702) ( 0.01, 0.00, 0.00) electro ( -2.810, 0.456, -0.648) ( -2.810, 0.456, -0.648) ( 0.00, 0.00, 0.00) 34 ( 10.521, 3.577, -4.419) ( 10.527, 3.578, -4.416) ( 0.06, 0.02, 0.08) @@ -11913,7 +12260,7 @@ angle ( 3.434, -0.862, -3.531) ( 3.435, -0.861, -3.530) ( 0.02, 0.04, 0.03) strbnd ( -0.868, -0.657, 2.046) ( -0.868, -0.658, 2.046) ( 0.01, 0.00, 0.02) torsion ( -0.397, 0.278, 0.129) ( -0.397, 0.278, 0.129) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.894, 2.781, 6.709) ( -1.894, 2.781, 6.709) ( 0.01, 0.00, 0.00) electro ( -3.494, -1.009, 1.492) ( -3.494, -1.009, 1.492) ( 0.00, 0.00, 0.00) 35 ( 0.612, -0.567, -0.708) ( 0.616, -0.568, -0.704) ( 0.25, 0.04, 0.32) @@ -12019,15 +12366,15 @@ torsion ( 0.081, 1.012, -0.193) ( 0.081, 1.012, -0.193) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.317, 0.020, -1.836) ( -0.317, 0.020, -1.835) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 48 ( 0.158, 0.208, 0.381) ( 0.161, 0.209, 0.382) ( 0.05, 0.03, 0.02) bond ( -1.345, -0.662, -0.174) ( -1.342, -0.661, -0.174) ( 0.21, 0.04, 0.00) angle ( 2.482, -5.347, 1.171) ( 2.482, -5.347, 1.171) ( 0.00, 0.01, 0.04) strbnd ( -0.569, -0.838, -0.623) ( -0.569, -0.838, -0.623) ( 0.00, 0.00, 0.00) torsion ( 0.479, -1.375, 1.531) ( 0.479, -1.375, 1.531) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.889, 8.429, -1.524) ( -0.889, 8.429, -1.524) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 49 ( 0.370, -0.684, 0.437) ( 0.371, -0.684, 0.441) ( 0.03, 0.03, 0.14) bond ( -0.186, 0.025, -0.685) ( -0.186, 0.025, -0.682) ( 0.00, 0.00, 0.22) angle ( 1.336, -2.129, -0.442) ( 1.336, -2.128, -0.442) ( 0.04, 0.02, 0.00) @@ -12041,9 +12388,9 @@ angle ( 5.516, 0.699, -0.794) ( 5.517, 0.699, -0.793) ( 0.01, 0.00, 0.04) strbnd ( 0.314, 1.208, -0.817) ( 0.314, 1.208, -0.817) ( 0.00, 0.00, 0.00) torsion ( -0.531, -0.207, -0.474) ( -0.531, -0.207, -0.474) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.114, 0.860, 2.470) ( -5.114, 0.860, 2.470) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 51 ( -0.316, -0.193, -0.505) ( -0.315, -0.192, -0.503) ( 0.06, 0.02, 0.10) bond ( 0.716, -0.298, -0.826) ( 0.717, -0.297, -0.824) ( 0.10, 0.01, 0.15) angle ( 1.189, -5.329, 2.958) ( 1.189, -5.328, 2.959) ( 0.03, 0.01, 0.01) @@ -12051,15 +12398,15 @@ torsion ( 0.936, -0.735, 1.080) ( 0.936, -0.735, 1.080) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.110, 6.758, -3.296) ( -3.110, 6.758, -3.296) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 52 ( -0.101, -0.092, -0.176) ( -0.100, -0.090, -0.175) ( 0.01, 0.02, 0.01) bond ( 1.134, -2.431, 0.852) ( 1.134, -2.428, 0.852) ( 0.05, 0.10, 0.03) angle ( -3.696, -1.139, 1.674) ( -3.696, -1.138, 1.675) ( 0.01, 0.01, 0.03) strbnd ( -1.209, 1.211, -0.450) ( -1.209, 1.211, -0.450) ( 0.00, 0.00, 0.00) torsion ( -0.018, 0.060, 0.194) ( -0.018, 0.060, 0.194) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 3.689, 2.206, -2.447) ( 3.689, 2.206, -2.447) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 53 ( 0.304, -0.091, -0.474) ( 0.305, -0.090, -0.471) ( 0.04, 0.01, 0.12) bond ( -0.341, -0.134, -0.569) ( -0.341, -0.134, -0.567) ( 0.03, 0.00, 0.14) angle ( 0.912, -4.148, 0.434) ( 0.913, -4.147, 0.434) ( 0.03, 0.01, 0.01) @@ -12067,21 +12414,21 @@ torsion ( 0.427, -0.471, -0.145) ( 0.427, -0.471, -0.145) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.333, 4.990, -0.524) ( -0.333, 4.990, -0.524) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 54 ( 0.047, 0.327, 0.213) ( 0.048, 0.328, 0.216) ( 0.00, 0.04, 0.06) bond ( 0.044, 0.448, -1.022) ( 0.044, 0.449, -1.019) ( 0.00, 0.02, 0.28) angle ( -5.073, 4.709, 1.855) ( -5.072, 4.710, 1.855) ( 0.01, 0.01, 0.00) strbnd ( -0.688, -1.108, -0.508) ( -0.688, -1.108, -0.508) ( 0.00, 0.00, 0.00) torsion ( 0.301, 0.513, 0.239) ( 0.301, 0.513, 0.239) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.463, -4.236, -0.352) ( 5.463, -4.236, -0.352) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 55 ( -0.139, -0.301, 0.325) ( -0.139, -0.299, 0.327) ( 0.01, 0.06, 0.06) bond ( 0.004, -0.058, -0.057) ( 0.004, -0.056, -0.056) ( 0.00, 0.01, 0.01) angle ( -0.993, 1.847, -1.929) ( -0.992, 1.847, -1.929) ( 0.07, 0.01, 0.01) strbnd ( -0.720, -1.271, 0.377) ( -0.720, -1.271, 0.377) ( 0.00, 0.00, 0.00) torsion ( 0.101, 0.125, -0.120) ( 0.101, 0.125, -0.120) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.469, -0.945, 2.055) ( 1.469, -0.944, 2.055) ( 0.01, 0.01, 0.00) electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 56 ( -0.037, -0.300, -0.241) ( -0.036, -0.299, -0.238) ( 0.00, 0.04, 0.06) @@ -12089,33 +12436,33 @@ angle ( -1.373, -1.962, -1.160) ( -1.373, -1.962, -1.159) ( 0.05, 0.02, 0.01) strbnd ( -0.304, 0.067, 1.171) ( -0.304, 0.067, 1.171) ( 0.00, 0.00, 0.00) torsion ( -1.378, 0.531, 0.218) ( -1.378, 0.532, 0.218) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.841, -0.714, 2.749) ( 2.842, -0.714, 2.749) ( 0.01, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 57 ( 0.041, 0.148, -0.296) ( 0.041, 0.150, -0.294) ( 0.00, 0.03, 0.06) bond ( -0.135, 2.007, 2.146) ( -0.135, 2.009, 2.147) ( 0.00, 0.08, 0.08) angle ( 0.451, -0.692, 0.675) ( 0.452, -0.692, 0.675) ( 0.03, 0.02, 0.02) strbnd ( -0.177, -0.030, -0.939) ( -0.177, -0.030, -0.939) ( 0.00, 0.00, 0.00) torsion ( -1.075, -0.300, 0.213) ( -1.075, -0.300, 0.213) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.976, -0.838, -2.392) ( 0.976, -0.838, -2.392) ( 0.02, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 58 ( -0.254, 0.017, -0.064) ( -0.254, 0.019, -0.062) ( 0.02, 0.00, 0.02) bond ( -0.040, -1.500, 1.928) ( -0.040, -1.499, 1.930) ( 0.00, 0.08, 0.11) angle ( -1.136, 1.312, 0.995) ( -1.135, 1.312, 0.995) ( 0.05, 0.03, 0.02) strbnd ( 0.280, -0.457, -0.574) ( 0.280, -0.457, -0.574) ( 0.00, 0.00, 0.00) torsion ( 0.158, 0.214, 0.170) ( 0.158, 0.214, 0.170) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.484, 0.449, -2.583) ( 0.484, 0.449, -2.583) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 59 ( -0.039, 0.371, 0.524) ( -0.039, 0.373, 0.526) ( 0.00, 0.07, 0.11) bond ( 0.250, 2.246, -2.453) ( 0.250, 2.247, -2.451) ( 0.00, 0.07, 0.07) angle ( -0.227, 0.092, 0.062) ( -0.226, 0.092, 0.062) ( 0.01, 0.00, 0.00) strbnd ( -0.193, -0.135, 1.231) ( -0.193, -0.135, 1.231) ( 0.00, 0.00, 0.00) torsion ( 0.564, 2.085, 1.969) ( 0.564, 2.085, 1.969) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.433, -3.917, -0.285) ( -0.433, -3.917, -0.285) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 60 ( -0.063, -0.072, 0.504) ( -0.062, -0.071, 0.506) ( 0.01, 0.01, 0.13) bond ( 0.260, 1.745, 3.031) ( 0.260, 1.746, 3.033) ( 0.00, 0.05, 0.08) angle ( 3.751, -1.603, 0.601) ( 3.752, -1.603, 0.601) ( 0.02, 0.02, 0.01) @@ -12129,15 +12476,15 @@ angle ( 0.076, -0.444, -1.547) ( 0.077, -0.444, -1.546) ( 0.00, 0.00, 0.04) strbnd ( -0.121, -0.013, 0.295) ( -0.121, -0.013, 0.295) ( 0.00, 0.00, 0.00) torsion ( 0.940, 0.033, -0.103) ( 0.940, 0.033, -0.103) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.309, 2.616, 0.740) ( -1.309, 2.616, 0.740) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 62 ( -0.037, 0.359, 0.037) ( -0.037, 0.362, 0.038) ( 0.00, 0.10, 0.00) bond ( -0.580, 1.889, -0.905) ( -0.580, 1.891, -0.905) ( 0.01, 0.13, 0.05) angle ( -0.273, 0.763, 1.769) ( -0.273, 0.763, 1.769) ( 0.01, 0.01, 0.02) strbnd ( -0.325, 0.488, 0.279) ( -0.325, 0.488, 0.279) ( 0.00, 0.00, 0.00) torsion ( 1.294, 0.792, 0.827) ( 1.294, 0.792, 0.827) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.153, -3.573, -1.933) ( -0.153, -3.573, -1.933) ( 0.00, 0.00, 0.00) electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 63 ( -0.297, 0.195, 0.097) ( -0.296, 0.196, 0.100) ( 0.03, 0.01, 0.03) @@ -12145,15 +12492,15 @@ angle ( -1.418, 1.386, 0.261) ( -1.418, 1.387, 0.261) ( 0.03, 0.03, 0.00) strbnd ( -0.282, 0.382, 0.365) ( -0.282, 0.382, 0.365) ( 0.00, 0.00, 0.00) torsion ( 0.426, 0.990, -0.350) ( 0.426, 0.990, -0.350) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.367, -2.878, -1.812) ( 0.367, -2.878, -1.812) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 64 ( 1.903, 0.126, -0.903) ( 1.903, 0.131, -0.902) ( 0.00, 0.07, 0.08) bond ( 0.052, 0.524, -0.141) ( 0.052, 0.529, -0.141) ( 0.00, 0.27, 0.01) angle ( 0.150, -0.836, -3.088) ( 0.150, -0.836, -3.088) ( 0.00, 0.00, 0.02) strbnd ( -0.049, -0.575, 0.050) ( -0.049, -0.575, 0.050) ( 0.00, 0.00, 0.00) torsion ( 0.430, -0.034, 0.030) ( 0.430, -0.034, 0.030) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.052, 1.173, 1.899) ( 0.052, 1.173, 1.900) ( 0.00, 0.00, 0.00) electro ( 1.267, -0.125, 0.347) ( 1.267, -0.125, 0.347) ( 0.00, 0.00, 0.00) 65 (-13.463, -0.711, 6.828) (-13.458, -0.711, 6.829) ( 0.04, 0.02, 0.01) @@ -12161,7 +12508,7 @@ angle ( 0.082, -0.169, 2.424) ( 0.082, -0.169, 2.425) ( 0.00, 0.00, 0.02) strbnd ( 0.390, 0.135, -0.958) ( 0.390, 0.135, -0.958) ( 0.00, 0.00, 0.00) torsion ( -0.084, 0.524, 0.039) ( -0.084, 0.524, 0.039) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.216, 1.133, 7.265) ( -1.216, 1.133, 7.265) ( 0.00, 0.00, 0.00) electro ( 4.450, 0.427, -2.326) ( 4.450, 0.427, -2.326) ( 0.00, 0.00, 0.00) ok 14 # gradients @@ -12321,48 +12668,48 @@ bond ( 6.549, -6.489, -5.236) ( 6.550, -6.488, -5.235) ( 0.02, 0.02, 0.02) angle (-15.891, -11.333, -5.837) (-15.890, -11.333, -5.837) ( 0.00, 0.00, 0.01) strbnd ( -1.046, 0.503, 0.436) ( -1.046, 0.503, 0.436) ( 0.00, 0.00, 0.00) - torsion ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.839, 1.264, 1.139) ( 0.839, 1.264, 1.139) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 20 ( -6.872, -6.628, -8.449) ( -6.870, -6.627, -8.448) ( 0.02, 0.01, 0.02) bond ( -7.287, 3.445, -8.054) ( -7.286, 3.445, -8.052) ( 0.02, 0.01, 0.02) angle ( -1.156, -10.327, -3.372) ( -1.156, -10.326, -3.372) ( 0.02, 0.01, 0.01) strbnd ( 1.415, -1.060, 1.430) ( 1.415, -1.060, 1.430) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.156, 1.313, 1.547) ( 0.156, 1.313, 1.547) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 21 ( -5.154, -11.419, -3.897) ( -5.153, -11.418, -3.895) ( 0.02, 0.01, 0.04) bond ( -5.951, -7.142, 6.246) ( -5.950, -7.141, 6.247) ( 0.02, 0.02, 0.02) angle ( -0.744, -6.990, -8.698) ( -0.743, -6.990, -8.698) ( 0.02, 0.00, 0.01) strbnd ( 1.377, 1.441, -1.809) ( 1.377, 1.441, -1.809) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.163, 1.273, 0.365) ( 0.163, 1.273, 0.365) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 22 ( 6.707, 14.950, -4.095) ( 6.709, 14.951, -4.094) ( 0.04, 0.00, 0.03) bond ( 10.180, 0.038, -5.182) ( 10.183, 0.038, -5.181) ( 0.02, 0.00, 0.01) angle ( -0.643, 16.864, -1.139) ( -0.642, 16.864, -1.139) ( 0.01, 0.00, 0.03) strbnd ( -2.565, 0.430, 1.327) ( -2.565, 0.430, 1.327) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.266, -2.382, 0.899) ( -0.266, -2.382, 0.899) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( 7.712, 7.044, 4.929) ( 7.712, 7.045, 4.931) ( 0.01, 0.01, 0.05) bond ( 2.115, 4.636, 9.930) ( 2.115, 4.637, 9.932) ( 0.01, 0.01, 0.02) angle ( 6.274, 3.725, -3.075) ( 6.274, 3.725, -3.075) ( 0.01, 0.01, 0.00) strbnd ( -0.199, -0.342, -1.642) ( -0.199, -0.342, -1.642) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.477, -0.975, -0.284) ( -0.477, -0.975, -0.284) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( 10.798, 13.827, -7.791) ( 10.799, 13.829, -7.790) ( 0.01, 0.01, 0.02) bond ( -5.076, 7.231, -5.839) ( -5.075, 7.232, -5.838) ( 0.01, 0.02, 0.02) angle ( 15.920, 8.574, -3.218) ( 15.920, 8.575, -3.218) ( 0.00, 0.00, 0.01) strbnd ( 0.876, -0.556, 0.755) ( 0.876, -0.556, 0.755) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.922, -1.422, 0.511) ( -0.922, -1.422, 0.511) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) ok 16 # gradients @@ -12988,32 +13335,188 @@ angle ( 5.569, -0.090, -0.056) ( 5.570, -0.090, -0.056) ( 0.01, 0.00, 0.00) strbnd ( 2.049, 1.116, 0.067) ( 2.049, 1.116, 0.067) ( 0.00, 0.00, 0.00) torsion ( 0.000, 0.000, -0.009) ( 0.000, 0.000, -0.009) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.791, -1.108, -0.087) ( -3.791, -1.108, -0.087) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 17 ( 3.734, 1.697, 3.317) ( 3.735, 1.697, 3.320) ( 0.03, 0.05, 0.08) bond ( -0.653, 0.424, 1.150) ( -0.653, 0.424, 1.152) ( 0.05, 0.01, 0.21) angle ( 4.116, 2.173, 1.530) ( 4.116, 2.174, 1.530) ( 0.01, 0.02, 0.01) strbnd ( 2.185, 0.599, -0.219) ( 2.185, 0.599, -0.219) ( 0.00, 0.00, 0.00) torsion ( 0.003, -0.008, 0.004) ( 0.003, -0.008, 0.004) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -1.916, -1.492, 0.852) ( -1.916, -1.492, 0.852) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +18 ( 3.357, 1.877, -3.735) ( 3.358, 1.877, -3.733) ( 0.04, 0.05, 0.07) + bond ( -0.951, 0.766, -1.640) ( -0.950, 0.766, -1.638) ( 0.07, 0.04, 0.14) + angle ( 4.217, 2.283, -1.378) ( 4.217, 2.284, -1.377) ( 0.01, 0.02, 0.01) + strbnd ( 2.195, 0.574, 0.319) ( 2.195, 0.574, 0.319) ( 0.00, 0.00, 0.00) + torsion ( -0.003, 0.007, 0.005) ( -0.003, 0.007, 0.005) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -2.102, -1.754, -1.042) ( -2.101, -1.754, -1.042) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +19 ( -0.948, 1.749, -2.994) ( -0.947, 1.750, -2.991) ( 0.08, 0.04, 0.10) + bond ( 0.687, 0.547, -1.969) ( 0.688, 0.547, -1.967) ( 0.02, 0.01, 0.15) + angle ( -2.117, 0.190, -0.687) ( -2.116, 0.190, -0.687) ( 0.02, 0.01, 0.01) + strbnd ( -1.351, -0.031, 0.069) ( -1.351, -0.031, 0.069) ( 0.00, 0.00, 0.00) + torsion ( -0.009, 1.344, 0.371) ( -0.009, 1.344, 0.371) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 1.840, -0.300, -0.777) ( 1.840, -0.300, -0.777) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +20 ( 3.214, -1.427, 1.320) ( 3.215, -1.424, 1.320) ( 0.03, 0.21, 0.05) + bond ( 0.757, -1.956, 0.504) ( 0.757, -1.953, 0.504) ( 0.03, 0.15, 0.01) + angle ( -2.944, -1.085, 0.217) ( -2.943, -1.085, 0.218) ( 0.02, 0.01, 0.01) + strbnd ( -1.362, 0.055, -0.006) ( -1.362, 0.055, -0.006) ( 0.00, 0.00, 0.00) + torsion ( -0.001, -0.023, -0.087) ( -0.001, -0.023, -0.087) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 6.765, 1.580, 0.691) ( 6.765, 1.580, 0.691) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +21 ( 1.311, 2.298, 1.796) ( 1.312, 2.300, 1.798) ( 0.07, 0.08, 0.10) + bond ( 0.773, 1.536, 1.536) ( 0.773, 1.538, 1.538) ( 0.03, 0.10, 0.10) + angle ( -2.380, 0.642, 0.554) ( -2.380, 0.642, 0.554) ( 0.02, 0.02, 0.01) + strbnd ( -1.349, -0.045, -0.017) ( -1.349, -0.045, -0.017) ( 0.00, 0.00, 0.00) + torsion ( -0.034, 1.670, -1.653) ( -0.034, 1.670, -1.653) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 4.301, -1.506, 1.375) ( 4.301, -1.506, 1.375) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +22 ( -2.919, 0.875, 1.448) ( -2.916, 0.876, 1.450) ( 0.08, 0.06, 0.11) + bond ( -1.870, -0.110, 1.417) ( -1.868, -0.110, 1.418) ( 0.12, 0.00, 0.09) + angle ( 0.520, -2.593, 0.484) ( 0.520, -2.593, 0.484) ( 0.01, 0.02, 0.01) + strbnd ( 0.654, -1.205, 0.011) ( 0.654, -1.205, 0.011) ( 0.00, 0.00, 0.00) + torsion ( -1.476, -0.834, -2.010) ( -1.476, -0.834, -2.010) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.746, 5.617, 1.547) ( -0.746, 5.617, 1.547) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +23 ( -2.177, 4.626, 0.844) ( -2.175, 4.628, 0.845) ( 0.08, 0.05, 0.06) + bond ( 1.483, 1.776, 0.765) ( 1.485, 1.778, 0.766) ( 0.09, 0.10, 0.03) + angle ( 2.624, -2.307, 0.268) ( 2.625, -2.307, 0.268) ( 0.01, 0.01, 0.01) + strbnd ( 0.634, -1.241, -0.006) ( 0.634, -1.242, -0.006) ( 0.00, 0.00, 0.00) + torsion ( 0.519, 0.264, -1.620) ( 0.519, 0.264, -1.620) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -7.437, 6.134, 1.436) ( -7.437, 6.134, 1.436) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +24 ( -0.385, -1.508, -3.050) ( -0.385, -1.508, -3.047) ( 0.03, 0.04, 0.10) + bond ( -0.615, 0.404, -1.895) ( -0.615, 0.404, -1.892) ( 0.02, 0.01, 0.16) + angle ( 0.873, -1.806, -0.669) ( 0.873, -1.806, -0.669) ( 0.04, 0.03, 0.01) + strbnd ( 0.665, -1.206, 0.041) ( 0.665, -1.206, 0.041) ( 0.00, 0.00, 0.00) + torsion ( -0.796, -0.434, 0.166) ( -0.796, -0.434, 0.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.512, 1.534, -0.692) ( -0.512, 1.534, -0.692) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +ok 20 # gradients +ok 21 # energy +---------------------------------------------------------------------------------------- + + VALIDATE GRADIENTS : /Volumes/Home/ghutchis/Desktop/UFF/cholesterol.gpr + + +ATOM IDX NUMERICAL GRADIENT ANALYTICAL GRADIENT REL. ERROR (%) +---------------------------------------------------------------------------------------- + 1 ( 1.436, 0.635, -0.080) ( 1.441, 0.640, -0.074) ( 0.35, 0.34, 0.05) + bond ( 0.905, 2.623, 8.120) ( 0.909, 2.627, 8.124) ( 0.37, 0.15, 0.05) + angle ( 7.385, 0.772, -9.892) ( 7.388, 0.774, -9.889) ( 0.03, 0.16, 0.02) + strbnd ( 0.181, 1.490, -0.840) ( 0.180, 1.489, -0.841) ( 0.02, 0.06, 0.05) + torsion ( -3.658, -1.057, 2.616) ( -3.658, -1.057, 2.616) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -3.221, -3.068, -0.045) ( -3.221, -3.068, -0.045) ( 0.00, 0.00, 0.00) + electro ( -0.156, -0.125, -0.039) ( -0.156, -0.125, -0.039) ( 0.00, 0.00, 0.00) + 2 ( 0.736, 0.034, 0.004) ( 0.742, 0.039, 0.010) ( 0.41, 0.02, 0.00) + bond ( 11.123, -1.351, -2.048) ( 11.127, -1.347, -2.044) ( 0.04, 0.29, 0.21) + angle ( -8.045, 1.278, 9.737) ( -8.043, 1.280, 9.739) ( 0.03, 0.16, 0.02) + strbnd ( 0.965, -2.280, 1.631) ( 0.965, -2.281, 1.630) ( 0.07, 0.04, 0.02) + torsion ( 4.294, 0.736, -3.479) ( 4.294, 0.736, -3.478) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -7.601, 1.652, -5.836) ( -7.601, 1.652, -5.836) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 3 ( 0.562, 0.076, -0.092) ( 0.566, 0.081, -0.087) ( 0.27, 0.04, 0.05) + bond ( 6.097, -9.677, 17.390) ( 6.101, -9.673, 17.394) ( 0.06, 0.04, 0.02) + angle ( -1.378, 4.252, -13.110) ( -1.376, 4.254, -13.108) ( 0.15, 0.05, 0.02) + strbnd ( 0.257, 0.181, -0.552) ( 0.256, 0.180, -0.552) ( 0.03, 0.01, 0.03) + torsion ( -0.355, 2.764, 0.802) ( -0.355, 2.764, 0.802) ( 0.00, 0.00, 0.01) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -4.059, 2.557, -4.623) ( -4.059, 2.557, -4.623) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 4 ( 1.512, 0.156, -0.055) ( 1.517, 0.176, 0.019) ( 0.34, 0.31, 0.40) + bond ( 8.642, 10.885, -8.146) ( 8.646, 10.889, -8.142) ( 0.04, 0.04, 0.05) + angle ( -7.598, -8.113, 12.883) ( -7.596, -8.111, 12.884) ( 0.03, 0.02, 0.01) + strbnd ( -1.384, 1.903, -1.050) ( -1.385, 1.903, -1.050) ( 0.08, 0.03, 0.05) + torsion ( 3.685, 2.177, -4.847) ( 3.685, 2.177, -4.846) ( 0.00, 0.00, 0.00) + oop ( -0.002, -0.088, -0.446) ( -0.002, -0.075, -0.377) ( 0.00, 0.12, 3.03) + vdw ( -1.895, -6.707, 1.430) ( -1.894, -6.706, 1.430) ( 0.00, 0.00, 0.00) + electro ( 0.063, 0.099, 0.121) ( 0.063, 0.099, 0.121) ( 0.00, 0.00, 0.00) + 5 ( -8.945, 4.312, -0.274) ( -8.934, 4.277, -0.481) ( 0.12, 0.80, 5.66) + bond (-12.705, 14.137, -1.636) (-12.697, 14.141, -1.636) ( 0.06, 0.03, 0.02) + angle ( 1.253, 3.126, -9.477) ( 1.254, 3.128, -9.476) ( 0.12, 0.05, 0.01) + strbnd ( 1.419, -3.117, 0.027) ( 1.419, -3.117, 0.027) ( 0.04, 0.02, 0.00) + torsion ( -0.255, 1.581, 7.797) ( -0.255, 1.581, 7.798) ( 0.00, 0.00, 0.01) + oop ( -0.011, 0.244, 1.272) ( -0.008, 0.203, 1.063) ( 0.00, 0.98, 16.38) + vdw ( 0.999, -11.742, 1.783) ( 0.999, -11.742, 1.783) ( 0.02, 0.00, 0.00) + electro ( 0.355, 0.083, -0.040) ( 0.355, 0.083, -0.040) ( 0.00, 0.00, 0.00) + 6 ( 8.712, -4.725, 1.481) ( 8.721, -4.712, 1.502) ( 0.11, 0.28, 1.43) + bond ( 3.884, 4.853, -0.204) ( 3.892, 4.858, -0.204) ( 0.19, 0.11, 0.01) + angle ( 1.621, -0.921, 2.154) ( 1.622, -0.919, 2.155) ( 0.08, 0.16, 0.02) + strbnd ( -1.690, 1.656, -0.349) ( -1.691, 1.655, -0.349) ( 0.04, 0.03, 0.00) + torsion ( -0.062, -0.722, -2.668) ( -0.062, -0.722, -2.667) ( 0.00, 0.00, 0.04) + oop ( -0.011, -0.030, -0.074) ( -0.010, -0.023, -0.055) ( 0.00, 0.02, 0.14) + vdw ( 4.938, -9.590, 2.718) ( 4.938, -9.589, 2.718) ( 0.00, 0.00, 0.00) + electro ( 0.032, 0.028, -0.096) ( 0.032, 0.028, -0.096) ( 0.00, 0.00, 0.00) + 7 ( -1.422, 0.562, -0.406) ( -1.418, 0.571, -0.376) ( 0.28, 0.47, 1.19) + bond (-11.282, 11.208, 0.541) (-11.278, 11.212, 0.545) ( 0.04, 0.03, 0.24) + angle ( 9.286, -4.053, -3.402) ( 9.288, -4.051, -3.400) ( 0.02, 0.05, 0.04) + strbnd ( 0.811, -0.072, -0.853) ( 0.810, -0.073, -0.854) ( 0.06, 0.01, 0.03) + torsion ( -1.331, -0.869, 0.696) ( -1.331, -0.869, 0.696) ( 0.00, 0.00, 0.02) + oop ( 0.009, -0.020, -0.131) ( 0.007, -0.017, -0.108) ( 0.00, 0.01, 0.31) + vdw ( 0.881, -5.592, 2.703) ( 0.881, -5.592, 2.703) ( 0.01, 0.00, 0.00) + electro ( 0.204, -0.039, 0.041) ( 0.204, -0.039, 0.041) ( 0.00, 0.00, 0.00) + 8 ( 0.736, 0.178, 0.067) ( 0.740, 0.183, 0.072) ( 0.35, 0.09, 0.04) + bond ( -1.261, -2.729, -19.147) ( -1.258, -2.725, -19.143) ( 0.27, 0.13, 0.02) + angle ( -9.942, 7.503, 26.405) ( -9.940, 7.505, 26.407) ( 0.02, 0.03, 0.01) + strbnd ( 4.138, 2.113, 0.872) ( 4.137, 2.112, 0.871) ( 0.02, 0.04, 0.03) + torsion ( 2.267, -2.809, -7.166) ( 2.267, -2.809, -7.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 5.533, -3.900, -0.897) ( 5.533, -3.899, -0.897) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + 9 ( 0.364, 0.232, -0.008) ( 0.369, 0.237, -0.002) ( 0.20, 0.11, 0.00) + bond ( -6.983, 11.163, 5.799) ( -6.980, 11.166, 5.803) ( 0.06, 0.03, 0.07) + angle ( 6.589, 0.564, -10.864) ( 6.592, 0.566, -10.862) ( 0.04, 0.12, 0.02) + strbnd ( -4.331, -9.696, 0.323) ( -4.332, -9.697, 0.323) ( 0.02, 0.01, 0.01) + torsion ( 0.192, 1.536, 1.287) ( 0.192, 1.536, 1.287) ( 0.00, 0.00, 0.01) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 4.897, -3.334, 3.446) ( 4.897, -3.334, 3.447) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +10 ( 0.279, 0.320, 0.215) ( 0.284, 0.326, 0.221) ( 0.13, 0.18, 0.13) + bond ( 3.926, 16.947, -8.842) ( 3.929, 16.951, -8.838) ( 0.09, 0.02, 0.05) + angle ( -6.642, -8.727, 8.491) ( -6.640, -8.725, 8.493) ( 0.03, 0.02, 0.02) + strbnd ( -1.913, -4.925, 2.830) ( -1.914, -4.925, 2.830) ( 0.05, 0.01, 0.02) + torsion ( -1.013, -0.173, -1.195) ( -1.013, -0.173, -1.195) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 5.922, -2.802, -1.070) ( 5.922, -2.802, -1.070) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +11 ( 0.045, 0.535, 0.496) ( 0.051, 0.539, 0.502) ( 0.03, 0.24, 0.29) + bond (-22.008, -2.471, -8.891) (-22.004, -2.468, -8.886) ( 0.02, 0.14, 0.05) + angle ( 15.128, 5.024, 5.636) ( 15.130, 5.026, 5.638) ( 0.01, 0.04, 0.03) + strbnd ( 6.334, 1.549, 3.089) ( 6.333, 1.548, 3.089) ( 0.01, 0.06, 0.02) + torsion ( -1.616, 1.448, 1.166) ( -1.616, 1.448, 1.166) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( 2.209, -5.015, -0.504) ( 2.209, -5.015, -0.504) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) +12 ( 0.018, -0.028, -0.133) ( 0.022, -0.023, -0.128) ( 0.01, 0.01, 0.07) 226/229 Test #215: pytest_sym .......................***Timeout 1500.18 sec /build/openbabel-3.1.1+dfsg/scripts/python:/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu -227/229 Test #218: pytest_distgeom ..................***Timeout 1500.09 sec +227/229 Test #218: pytest_distgeom ..................***Timeout 1500.12 sec /build/openbabel-3.1.1+dfsg/scripts/python:/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu -228/229 Test #224: pybindtest__pybel ................***Timeout 1500.11 sec +228/229 Test #224: pybindtest__pybel ................***Timeout 1500.12 sec /build/openbabel-3.1.1+dfsg/scripts/python:/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu -229/229 Test #229: pybindtest_roundtrip .............***Timeout 1500.15 sec +229/229 Test #229: pybindtest_roundtrip .............***Timeout 1500.14 sec /build/openbabel-3.1.1+dfsg/scripts/python:/build/openbabel-3.1.1+dfsg/builddir/lib/x86_64-linux-gnu 95% tests passed, 11 tests failed out of 229 -Total Test time (real) = 1558.97 sec +Total Test time (real) = 1532.69 sec The following tests FAILED: 17 - test_builder_1 (Timeout) @@ -13030,14 +13533,14 @@ Errors while running CTest make[2]: *** [Makefile:140: test] Error 8 make[2]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -dh_auto_test: error: cd builddir && make -j15 test ARGS\+=-j15 returned exit code 2 +dh_auto_test: error: cd builddir && make -j16 test ARGS\+=-j16 returned exit code 2 make[1]: [debian/rules:57: override_dh_auto_test] Error 25 (ignored) make[1]: Leaving directory '/build/openbabel-3.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=/build/openbabel-3.1.1\+dfsg/builddir dh_prep -O--builddirectory=/build/openbabel-3.1.1\+dfsg/builddir dh_auto_install -O--builddirectory=/build/openbabel-3.1.1\+dfsg/builddir - cd builddir && make -j15 install DESTDIR=/build/openbabel-3.1.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd builddir && make -j16 install DESTDIR=/build/openbabel-3.1.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' /usr/bin/cmake -S/build/openbabel-3.1.1+dfsg -B/build/openbabel-3.1.1+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/openbabel-3.1.1+dfsg/builddir/CMakeFiles /build/openbabel-3.1.1+dfsg/builddir//CMakeFiles/progress.marks @@ -13054,439 +13557,435 @@ [ 15%] Built target openbabel make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend -make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= +make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src /build/openbabel-3.1.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= +make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/CMakeFiles/plugin_charges.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build -make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/CMakeFiles/plugin_ops.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_forcefields.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_fingerprints.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/CMakeFiles/plugin_charges.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_descriptors.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/CMakeFiles/plugin_ops.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cacaoformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 16%] Built target plugin_charges +[ 21%] Built target plugin_ops +[ 22%] Built target plugin_forcefields +make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend +[ 23%] Built target plugin_fingerprints +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend +make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= +[ 25%] Built target plugin_descriptors +make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build -make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build +[ 26%] Built target cacaoformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mdffformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/acrformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build -make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/balstformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build +[ 26%] Built target mdffformat +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/MCDLformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 17%] Built target plugin_charges -[ 17%] Built target plugin_forcefields make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build +make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/molproformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 22%] Built target plugin_ops -[ 24%] Built target plugin_descriptors -[ 25%] Built target plugin_fingerprints -[ 26%] Built target cacaoformat -[ 26%] Built target mdffformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/orcaformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 27%] Built target acrformat [ 27%] Built target balstformat -make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= -[ 28%] Built target molproformat -[ 29%] Built target MCDLformat +[ 28%] Built target MCDLformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= +[ 29%] Built target molproformat make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend +make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build +make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 29%] Built target orcaformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/orcaformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/zindoformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build -make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend -make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xsfformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= -[ 29%] Built target orcaformat +make[3]: Nothing to be done for 'src/formats/CMakeFiles/qchemformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausscubeformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build +[ 30%] Built target zindoformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/crkformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 30%] Built target zindoformat +[ 30%] Built target xsfformat make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend -make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend +make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend +[ 30%] Built target qchemformat [ 30%] Built target crkformat +make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' [ 31%] Built target gausscubeformat -make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build -[ 31%] Built target xsfformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/qchemformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend +make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/amberformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmodformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/amberformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/acesformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 31%] Built target qchemformat -make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend -make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend +make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/titleformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 32%] Built target amberformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/CSRformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 32%] Built target mmodformat +make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend +[ 32%] Built target acesformat +make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build +[ 32%] Built target titleformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/titleformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 31%] Built target mmodformat -[ 32%] Built target amberformat +[ 32%] Built target CSRformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/CSRformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build -make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/acesformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 32%] Built target titleformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/moldenformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/bgfformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mopacformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 32%] Built target CSRformat -make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend -[ 32%] Built target acesformat +make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build [ 32%] Built target moldenformat +make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend -[ 32%] Built target mopacformat -make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/xyzformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/jaguarformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mol2format.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 33%] Built target bgfformat +[ 33%] Built target mopacformat +[ 34%] Built target xyzformat +make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend -[ 33%] Built target bgfformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend +[ 35%] Built target jaguarformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/xyzformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= +[ 36%] Built target mol2format +make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend +make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cofformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/hinformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mol2format.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausszmatformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/jaguarformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build -make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend +make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build +make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausszmatformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/rxnformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= -[ 33%] Built target hinformat -[ 34%] Built target mol2format -[ 35%] Built target jaguarformat -make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend -[ 36%] Built target xyzformat -make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pwscfformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 36%] Built target hinformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cofformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cofformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build +[ 36%] Built target gausszmatformat +make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend +[ 36%] Built target rxnformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= -[ 36%] Built target gausszmatformat make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/rxnformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend +[ 36%] Built target pwscfformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend +[ 36%] Built target cofformat make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend -[ 36%] Built target rxnformat -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pwscfformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cofformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build -make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gulpformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/posformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/reportformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build -make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/chem3dformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build +make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/confabreport.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/castepformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/chem3dformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 36%] Built target pwscfformat -[ 36%] Built target cofformat [ 36%] Built target gulpformat [ 37%] Built target posformat -[ 39%] Built target reportformat -[ 39%] Built target confabreport +make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend +[ 38%] Built target reportformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend -make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend +[ 39%] Built target confabreport make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend +[ 39%] Built target chem3dformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend -[ 39%] Built target chem3dformat -[ 40%] Built target castepformat -make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend +make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build +make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/castepformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/adfformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/nulformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/outformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/nulformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build -make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/textformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pqrformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 40%] Built target castepformat [ 40%] Built target adfformat [ 41%] Built target outformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend +[ 41%] Built target nulformat +[ 41%] Built target textformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pqrformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= +[ 42%] Built target pqrformat make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend -[ 41%] Built target textformat -[ 41%] Built target nulformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/stlformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 42%] Built target pqrformat make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/stlformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build -[ 42%] Built target stlformat make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/nwchemformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/povrayformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/inchiformat.dir/build'. @@ -13497,249 +13996,265 @@ make[3]: Nothing to be done for 'src/formats/CMakeFiles/aoforceformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/build +[ 42%] Built target stlformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/maeformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build -[ 42%] Built target povrayformat +[ 43%] Built target nwchemformat +[ 43%] Built target povrayformat +make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend +[ 44%] Built target inchiformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/rinchiformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 43%] Built target inchiformat +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend -[ 44%] Built target nwchemformat +[ 44%] Built target aoforceformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend -make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend +[ 45%] Built target maeformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= -[ 44%] Built target rinchiformat -[ 44%] Built target aoforceformat -make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend +make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= -[ 45%] Built target maeformat -make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend +make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/rinchiformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/MNAformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/MNAformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/boxformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build +[ 45%] Built target rinchiformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/asciiformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build +[ 45%] Built target MNAformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pngformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mdlformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 45%] Built target MNAformat -[ 45%] Built target boxformat +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend +[ 46%] Built target asciiformat +[ 46%] Built target boxformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend +[ 46%] Built target pngformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend -[ 46%] Built target asciiformat -[ 46%] Built target pngformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend -make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mdlformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/PQSformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/gamessformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/turbomoleformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/thermoformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 47%] Built target mdlformat +[ 47%] Built target PQSformat +[ 48%] Built target gamessformat +make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend +[ 49%] Built target turbomoleformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= -[ 47%] Built target mdlformat -make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend +[ 50%] Built target thermoformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/PQSformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/turbomoleformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build +make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/thermoformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build +make[3]: Nothing to be done for 'src/formats/CMakeFiles/svgformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build +make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/gamessformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/painterformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build +make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/svgformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/daltonformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build -[ 47%] Built target PQSformat -[ 48%] Built target turbomoleformat -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/painterformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemkinformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build +[ 51%] Built target svgformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xmlformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/abinitformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/daltonformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 49%] Built target gamessformat -[ 50%] Built target thermoformat -[ 51%] Built target svgformat -make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend [ 51%] Built target painterformat -make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend +[ 52%] Built target daltonformat +[ 53%] Built target chemkinformat +make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend -[ 52%] Built target xmlformat +make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend +[ 54%] Built target xmlformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= -[ 53%] Built target chemkinformat +make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend +[ 55%] Built target abinitformat +make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend -[ 54%] Built target abinitformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend -[ 55%] Built target daltonformat -make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build -make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/tinkerformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build +make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/APIInterface.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build -make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 55%] Built target tinkerformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fchkformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pubchem.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/carformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build +make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 55%] Built target APIInterface +[ 55%] Built target fchkformat +make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend +[ 55%] Built target pubchem make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cccformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend +[ 55%] Built target carformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend +[ 55%] Built target pdbformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cccformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build -[ 55%] Built target APIInterface -[ 55%] Built target tinkerformat -[ 55%] Built target pubchem -[ 55%] Built target fchkformat -[ 55%] Built target carformat +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gamessukformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pcmodelformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build [ 55%] Built target cccformat -make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend -make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/copyformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawct.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 55%] Built target gamessukformat +[ 56%] Built target pcmodelformat make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend +[ 56%] Built target copyformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= -[ 55%] Built target pdbformat -[ 56%] Built target pcmodelformat -[ 56%] Built target gamessukformat make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend +[ 56%] Built target chemdrawct make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend @@ -13747,492 +14262,474 @@ cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawct.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build -make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/copyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemtoolformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fhiaimsformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cifformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend -make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= -[ 56%] Built target chemdrawct make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= -[ 56%] Built target copyformat +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gaussformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 56%] Built target chemtoolformat make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 57%] Built target cifformat -make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build -[ 57%] Built target fhiaimsformat -make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend -make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/dlpolyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 56%] Built target chemtoolformat +[ 56%] Built target fhiaimsformat +make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend +[ 57%] Built target cifformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/smilesformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= +[ 57%] Built target gaussformat +make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend +[ 57%] Built target dlpolyformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/exyzformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 57%] Built target gaussformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= -[ 57%] Built target dlpolyformat -[ 58%] Built target smilesformat +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build +make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastaformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/smilesformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/exyzformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build -make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastsearchformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastaformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gromos96format.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/featformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 58%] Built target smilesformat [ 59%] Built target exyzformat -[ 59%] Built target fastaformat +[ 60%] Built target fastsearchformat +[ 60%] Built target fastaformat make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend -make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend +[ 61%] Built target gromos96format make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend -[ 60%] Built target fastsearchformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build -[ 61%] Built target gromos96format +[ 61%] Built target featformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/featformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdoodlejsonformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fingerprintformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build -[ 61%] Built target featformat -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/molreport.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend +make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend -make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/molreport.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 61%] Built target molreport -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build -[ 62%] Built target fingerprintformat +make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fhformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/build -make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdoodlejsonformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cacheformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/fpsformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 62%] Built target fingerprintformat [ 63%] Built target fhformat -make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build +[ 63%] Built target molreport +[ 64%] Built target chemdoodlejsonformat +make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend +[ 64%] Built target cacheformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend +[ 64%] Built target fpsformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/fpsformat.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/freefracformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build -make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/crystal09format.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/groformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/smileyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend -make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend -[ 63%] Built target cacheformat +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build +[ 64%] Built target freefracformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/vaspformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 65%] Built target crystal09format +make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build -[ 64%] Built target chemdoodlejsonformat +[ 65%] Built target groformat make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/freefracformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 64%] Built target groformat -[ 64%] Built target fpsformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 64%] Built target smileyformat -make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build -make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend +[ 65%] Built target smileyformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/crystal09format.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 66%] Built target vaspformat +make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend +make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/vaspformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 64%] Built target freefracformat -make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend -[ 65%] Built target crystal09format +make[3]: Nothing to be done for 'src/formats/CMakeFiles/ghemicalformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build -make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/ghemicalformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/lmpdatformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 66%] Built target vaspformat -make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cssrformat.dir/build'. +make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cssrformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= +[ 67%] Built target ghemicalformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/msmsformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/msiformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 67%] Built target ghemicalformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build -[ 67%] Built target lmpdatformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build -make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/lpmdformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 67%] Built target lmpdatformat +make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend +[ 67%] Built target cssrformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmcifformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend +[ 67%] Built target msmsformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend +[ 67%] Built target lpmdformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend -[ 67%] Built target cssrformat make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/msiformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 67%] Built target msmsformat -[ 68%] Built target msiformat -[ 68%] Built target mmcifformat -make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build +[ 68%] Built target msiformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbqtformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmcifformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build -[ 68%] Built target lpmdformat +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mpqcformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend -make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend +make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/siestaformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mpdformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pointcloudformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 69%] Built target pdbqtformat +[ 69%] Built target mmcifformat +[ 69%] Built target siestaformat +[ 69%] Built target mpqcformat +make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= +[ 70%] Built target mpdformat +make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/siestaformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend -make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend +[ 70%] Built target pointcloudformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/depend -make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/wlnformat.dir/DependInfo.cmake --color= -[ 69%] Built target pdbqtformat -[ 69%] Built target mpqcformat -make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mpdformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 69%] Built target siestaformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build +make[3]: Nothing to be done for 'src/formats/CMakeFiles/shelxformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pointcloudformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/unichemformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build -make -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/shelxformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/opendxformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build +make -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/viewmolformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 71%] Built target shelxformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/wlnformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/xedformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 70%] Built target mpdformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build +[ 71%] Built target unichemformat +[ 71%] Built target opendxformat +make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/opendxformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 70%] Built target pointcloudformat -[ 70%] Built target unichemformat +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend -[ 70%] Built target viewmolformat +[ 71%] Built target viewmolformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend -make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= -[ 71%] Built target shelxformat +make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend [ 72%] Built target wlnformat -make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= -[ 72%] Built target xedformat -[ 72%] Built target opendxformat +make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build -make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/yasaraformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/xedformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/yasaraformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build -make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/dmolformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 72%] Built target xedformat +make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/rsmiformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/alchemyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 72%] Built target yasaraformat +[ 72%] Built target dmolformat +make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend +[ 72%] Built target rsmiformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend +[ 72%] Built target alchemyformat +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 72%] Built target yasaraformat -make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xtcformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/png2format.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 72%] Built target dmolformat +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cdxmlformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build +[ 72%] Built target xtcformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cdxmlformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlreactformat.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 72%] Built target rsmiformat -[ 72%] Built target alchemyformat -[ 72%] Built target xtcformat -make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend +[ 73%] Built target png2format +[ 74%] Built target cdxmlformat make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend -make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= -[ 73%] Built target png2format +make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend +[ 74%] Built target cmlformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/formats /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/formats /build/openbabel-3.1.1+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake --color= make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend -[ 74%] Built target cdxmlformat -[ 74%] Built target cmlformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build -make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend -make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend +[ 75%] Built target cmlreactformat make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= -make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend +make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlreactformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake --color= -make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= -[ 75%] Built target cmlreactformat -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawcdx.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build -make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obspectrophore.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pubchemjsonformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obrms.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obspectrophore.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obgrep.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' @@ -14240,193 +14737,199 @@ make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obthermo.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 75%] Built target chemdrawcdx [ 76%] Built target pubchemjsonformat -[ 76%] Built target chemdrawcdx -[ 76%] Built target obspectrophore [ 77%] Built target obrms -make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build -make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build +make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend +[ 77%] Built target obspectrophore +[ 77%] Built target obgrep make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obtautomer.dir/build'. -make[3]: Nothing to be done for 'tools/CMakeFiles/obabel.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend -make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend +[ 77%] Built target obthermo make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake --color= make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend -[ 77%] Built target obgrep -[ 78%] Built target obtautomer -[ 78%] Built target obabel -[ 78%] Built target obthermo -make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend -make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= -make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= -make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obmm.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= -make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend -make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfitall.dir/DependInfo.cmake --color= -make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend +make[3]: Nothing to be done for 'tools/CMakeFiles/obtautomer.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'tools/CMakeFiles/obabel.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obminimize.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obdistgen.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obminimize.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obrotate.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build -make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build +make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obenergy.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obfit.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 78%] Built target obtautomer +[ 78%] Built target obabel +[ 78%] Built target obminimize +[ 78%] Built target obdistgen +make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend +[ 79%] Built target obrotate +[ 79%] Built target obenergy +make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obmm.dir/DependInfo.cmake --color= +[ 80%] Built target obfit +make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obrotate.dir/build'. +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obfitall.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obprobe.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build -make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build -make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build -make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obprobe.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obmm.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obenergy.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obprop.dir/build'. +make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obgen.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obfitall.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obprop.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build +make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obrotamer.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obfitall.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 78%] Built target obminimize -[ 78%] Built target obdistgen -[ 78%] Built target obprobe -[ 78%] Built target obenergy -[ 79%] Built target obrotate -[ 80%] Built target obfit -make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend +[ 80%] Built target obprobe [ 81%] Built target obmm -make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend -make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend +make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend [ 81%] Built target obprop [ 82%] Built target obgen -[ 82%] Built target obrotamer make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend [ 82%] Built target obfitall make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obsym.dir/DependInfo.cmake --color= -make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend -make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= -make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend -make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/tools /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/tools /build/openbabel-3.1.1+dfsg/builddir/tools/CMakeFiles/obsym.dir/DependInfo.cmake --color= +make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/src/GUI /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/src/GUI /build/openbabel-3.1.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= -make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend -make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/scripts /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/scripts /build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= +make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'tools/CMakeFiles/obrotamer.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/scripts /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/scripts /build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build +make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obsym.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obconformer.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build +make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build +[ 82%] Built target obrotamer make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'test/CMakeFiles/test_inchiwrite.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build +make[3]: Nothing to be done for 'tools/CMakeFiles/obsym.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build -make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obconformer.dir/build'. +make[3]: Nothing to be done for 'src/GUI/CMakeFiles/obgui.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'test/CMakeFiles/roundtrip.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 83%] Built target obconformer +make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend +[ 83%] Built target obsym +make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_perl.dir/build'. -make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= +[ 84%] Built target obgui +make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend +[ 85%] Built target roundtrip +make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/scripts /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/scripts /build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/test /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/test /build/openbabel-3.1.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +cd /build/openbabel-3.1.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-3.1.1+dfsg /build/openbabel-3.1.1+dfsg/scripts /build/openbabel-3.1.1+dfsg/builddir /build/openbabel-3.1.1+dfsg/builddir/scripts /build/openbabel-3.1.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build -[ 82%] Built target test_inchiwrite -[ 82%] Built target obsym -[ 83%] Built target roundtrip -[ 84%] Built target obconformer +make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/GUI/CMakeFiles/obgui.dir/build'. +make[3]: Nothing to be done for 'test/CMakeFiles/test_inchiwrite.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build -[ 84%] Built target bindings_perl +make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' +make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_perl.dir/build'. +make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'test/CMakeFiles/test_runner.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' +[ 85%] Built target test_inchiwrite make[3]: Entering directory '/build/openbabel-3.1.1+dfsg/builddir' make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_python.dir/build'. make[3]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' -[ 85%] Built target obgui +[ 85%] Built target bindings_perl [ 99%] Built target test_runner [100%] Built target bindings_python make[2]: Leaving directory '/build/openbabel-3.1.1+dfsg/builddir' @@ -14856,11 +15359,11 @@ dpkg-gencontrol: warning: package python3-openbabel: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--builddirectory=/build/openbabel-3.1.1\+dfsg/builddir dh_builddeb -O--builddirectory=/build/openbabel-3.1.1\+dfsg/builddir -dpkg-deb: building package 'openbabel-gui-dbgsym' in '../openbabel-gui-dbgsym_3.1.1+dfsg-6_amd64.deb'. +dpkg-deb: building package 'openbabel' in '../openbabel_3.1.1+dfsg-6_amd64.deb'. dpkg-deb: building package 'openbabel-dbgsym' in '../openbabel-dbgsym_3.1.1+dfsg-6_amd64.deb'. +dpkg-deb: building package 'openbabel-gui-dbgsym' in '../openbabel-gui-dbgsym_3.1.1+dfsg-6_amd64.deb'. dpkg-deb: building package 'openbabel-gui' in '../openbabel-gui_3.1.1+dfsg-6_amd64.deb'. dpkg-deb: building package 'libopenbabel-dev' in '../libopenbabel-dev_3.1.1+dfsg-6_amd64.deb'. -dpkg-deb: building package 'openbabel' in '../openbabel_3.1.1+dfsg-6_amd64.deb'. dpkg-deb: building package 'libopenbabel7' in '../libopenbabel7_3.1.1+dfsg-6_amd64.deb'. dpkg-deb: building package 'libopenbabel7-dbgsym' in '../libopenbabel7-dbgsym_3.1.1+dfsg-6_amd64.deb'. dpkg-deb: building package 'libopenbabel-doc' in '../libopenbabel-doc_3.1.1+dfsg-6_all.deb'. @@ -14875,12 +15378,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1714546/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1714546/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/837310 and its subdirectories -I: Current time: Thu Dec 30 10:37:03 -12 2021 -I: pbuilder-time-stamp: 1640903823 +I: removing directory /srv/workspace/pbuilder/1714546 and its subdirectories +I: Current time: Thu Feb 2 19:37:27 +14 2023 +I: pbuilder-time-stamp: 1675316247