Diff of the two buildlogs: -- --- b1/build.log 2021-07-23 23:03:44.177770923 +0000 +++ b2/build.log 2021-07-23 23:23:05.690095507 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Aug 25 17:20:09 -12 2022 -I: pbuilder-time-stamp: 1661491209 +I: Current time: Sat Jul 24 13:03:51 +14 2021 +I: pbuilder-time-stamp: 1627081431 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./mmseqs2_12-113e3+ds-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.vM0Nzp25/trustedkeys.kbx': General error -gpgv: Signature made Fri Feb 12 02:31:54 2021 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.AXgSmahf/trustedkeys.kbx': General error +gpgv: Signature made Sat Feb 13 04:31:54 2021 +14 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mmseqs2_12-113e3+ds-3.dsc @@ -33,135 +33,169 @@ dpkg-source: info: applying use_system_gzstream.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3082/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/10809/tmp/hooks/D01_modify_environment starting +debug: Running on codethink10-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/10809/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/10809/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' - DISTRIBUTION='' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3082' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=10809 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.UDLEsY64l2/pbuilderrc_BN3I --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.UDLEsY64l2/b1 --logfile b1/build.log mmseqs2_12-113e3+ds-3.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.UDLEsY64l2/pbuilderrc_hSU7 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.UDLEsY64l2/b2 --logfile b2/build.log --extrapackages usrmerge mmseqs2_12-113e3+ds-3.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink9-arm64 4.15.0-151-generic #157-Ubuntu SMP Fri Jul 9 21:03:48 UTC 2021 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-151-generic #157-Ubuntu SMP Fri Jul 9 21:03:48 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 - -rwxr-xr-x 1 root root 1282512 Jun 21 2021 bash - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat - -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown - -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp - -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash - -rwxr-xr-x 1 root root 101384 Sep 22 2020 date - -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd - -rwxr-xr-x 1 root root 89824 Sep 22 2020 df - -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir - -rwxr-xr-x 1 root root 76152 Feb 7 2021 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 31512 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 64856 Feb 7 2021 findmnt - -rwsr-xr-x 1 root root 34824 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe - -rwxr-xr-x 1 root root 93744 Mar 2 2021 gzip - -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln - -rwxr-xr-x 1 root root 52720 Feb 7 2020 login - -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls - -rwxr-xr-x 1 root root 161960 Feb 7 2021 lsblk - -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 51368 Feb 7 2021 more - -rwsr-xr-x 1 root root 51360 Feb 7 2021 mount - -rwxr-xr-x 1 root root 14496 Feb 7 2021 mountpoint - -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Jun 21 2021 rbash -> bash - -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm - -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 24 03:48 sh -> dash - -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty - -rwsr-xr-x 1 root root 67776 Feb 7 2021 su - -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync - -rwxr-xr-x 1 root root 535768 Feb 16 2021 tar - -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch - -rwxr-xr-x 1 root root 31512 Sep 22 2020 true - -rwxr-xr-x 1 root root 14264 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 30880 Feb 7 2021 umount - -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress - -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 59584 Feb 7 2021 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless - -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew -I: user script /srv/workspace/pbuilder/3082/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1282512 Jun 22 16:26 bash + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 14264 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 39832 Sep 23 2020 cat + -rwxr-xr-x 1 root root 64512 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 60368 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 64528 Sep 23 2020 chown + -rwxr-xr-x 1 root root 138896 Sep 23 2020 cp + -rwxr-xr-x 1 root root 129544 Dec 11 2020 dash + -rwxr-xr-x 1 root root 101384 Sep 23 2020 date + -rwxr-xr-x 1 root root 80984 Sep 23 2020 dd + -rwxr-xr-x 1 root root 89824 Sep 23 2020 df + -rwxr-xr-x 1 root root 143088 Sep 23 2020 dir + -rwxr-xr-x 1 root root 76152 Feb 8 04:38 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 35632 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 31512 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 64856 Feb 8 04:38 findmnt + -rwsr-xr-x 1 root root 34824 Feb 27 06:12 fusermount + -rwxr-xr-x 1 root root 178400 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe + -rwxr-xr-x 1 root root 93744 Mar 3 13:30 gzip + -rwxr-xr-x 1 root root 18440 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 68720 Sep 23 2020 ln + -rwxr-xr-x 1 root root 52720 Feb 8 2020 login + -rwxr-xr-x 1 root root 143088 Sep 23 2020 ls + -rwxr-xr-x 1 root root 161960 Feb 8 04:38 lsblk + -rwxr-xr-x 1 root root 85200 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 68744 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 43976 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 51368 Feb 8 04:38 more + -rwsr-xr-x 1 root root 51360 Feb 8 04:38 mount + -rwxr-xr-x 1 root root 14496 Feb 8 04:38 mountpoint + -rwxr-xr-x 1 root root 134808 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 35720 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Jun 22 16:26 rbash -> bash + -rwxr-xr-x 1 root root 43872 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 68592 Sep 23 2020 rm + -rwxr-xr-x 1 root root 43880 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 19208 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 24 13:04 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 23 23:25 sh.distrib -> dash + -rwxr-xr-x 1 root root 35656 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 72640 Sep 23 2020 stty + -rwsr-xr-x 1 root root 67776 Feb 8 04:38 su + -rwxr-xr-x 1 root root 35672 Sep 23 2020 sync + -rwxr-xr-x 1 root root 535768 Feb 17 23:55 tar + -rwxr-xr-x 1 root root 10568 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 89120 Sep 23 2020 touch + -rwxr-xr-x 1 root root 31512 Sep 23 2020 true + -rwxr-xr-x 1 root root 14264 Feb 27 06:12 ulockmgr_server + -rwsr-xr-x 1 root root 30880 Feb 8 04:38 umount + -rwxr-xr-x 1 root root 35640 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress + -rwxr-xr-x 1 root root 143088 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 59584 Feb 8 04:38 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless + -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew +I: user script /srv/workspace/pbuilder/10809/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -265,7 +299,7 @@ Get: 54 http://deb.debian.org/debian bullseye/main arm64 libsimde-dev all 0.7.2-4 [259 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libzstd-dev arm64 1.4.8+dfsg-2.1 [358 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] -Fetched 26.9 MB in 1s (45.7 MB/s) +Fetched 26.9 MB in 1s (47.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) @@ -504,8 +538,45 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 157 kB of additional disk space will be used. +Get:1 http://deb.debian.org/debian bullseye/main arm64 libnumber-compare-perl all 0.03-1.1 [6956 B] +Get:2 http://deb.debian.org/debian bullseye/main arm64 libtext-glob-perl all 0.11-1 [8888 B] +Get:3 http://deb.debian.org/debian bullseye/main arm64 libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://deb.debian.org/debian bullseye/main arm64 usrmerge all 25 [13.0 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (1395 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 24969 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1.1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... +Unpacking libtext-glob-perl (0.11-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_25_all.deb ... +Unpacking usrmerge (25) ... +Setting up libtext-glob-perl (0.11-1) ... +Setting up libnumber-compare-perl (0.03-1.1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (25) ... +The system has been successfully converted. +Processing triggers for man-db (2.9.4-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/mmseqs2-12-113e3+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../mmseqs2_12-113e3+ds-3_source.changes +hostname: Temporary failure in name resolution +I: Running cd /build/mmseqs2-12-113e3+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../mmseqs2_12-113e3+ds-3_source.changes dpkg-buildpackage: info: source package mmseqs2 dpkg-buildpackage: info: source version 12-113e3+ds-3 dpkg-buildpackage: info: source distribution unstable @@ -515,17 +586,17 @@ debian/rules clean dh clean debian/rules override_dh_auto_clean -make[1]: Entering directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt binnengegaan dh_auto_clean rm -Rf build-* -make[1]: Leaving directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt verlaten dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure-arch -make[1]: Entering directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt binnengegaan dh_auto_configure -- -DVERSION_OVERRIDE=12-113e3+ds-3 -DNATIVE_ARCH=0 cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DVERSION_OVERRIDE=12-113e3\+ds-3 -DNATIVE_ARCH=0 .. -- The CXX compiler identification is GNU 10.2.1 @@ -577,413 +648,413 @@ -- Build files have been written to: /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu -make[1]: Leaving directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt verlaten debian/rules override_dh_auto_build-arch -make[1]: Entering directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt binnengegaan dh_auto_build cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 -make[2]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[2]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/mmseqs2-12-113e3+ds -B/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/CMakeFiles /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all -make[3]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[3]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan make -f lib/microtar/CMakeFiles/microtar.dir/build.make lib/microtar/CMakeFiles/microtar.dir/depend -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/microtar /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake --color= make -f lib/cacode/CMakeFiles/cacode.dir/build.make lib/cacode/CMakeFiles/cacode.dir/depend -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/cacode /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/DependInfo.cmake --color= +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/microtar /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake --color= make -f lib/alp/CMakeFiles/alp.dir/build.make lib/alp/CMakeFiles/alp.dir/depend +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/cacode /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/DependInfo.cmake --color= make -f lib/ksw2/CMakeFiles/ksw2.dir/build.make lib/ksw2/CMakeFiles/ksw2.dir/depend -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/alp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp/CMakeFiles/alp.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/ksw2 /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2 /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2/CMakeFiles/ksw2.dir/DependInfo.cmake --color= make -f data/CMakeFiles/generated.dir/build.make data/CMakeFiles/generated.dir/depend -Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/depend.internal". -Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/depend.internal". -Scanning dependencies of target microtar -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/data /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data/CMakeFiles/generated.dir/DependInfo.cmake --color= -make -f lib/microtar/CMakeFiles/microtar.dir/build.make lib/microtar/CMakeFiles/microtar.dir/build -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/ksw2 /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2 /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2/CMakeFiles/ksw2.dir/DependInfo.cmake --color= make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/depend -Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/depend.internal". -Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/depend.internal". -Scanning dependencies of target cacode -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/src/version /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/DependInfo.cmake --color= +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/data /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data/CMakeFiles/generated.dir/DependInfo.cmake --color= make -f lib/tinyexpr/CMakeFiles/tinyexpr.dir/build.make lib/tinyexpr/CMakeFiles/tinyexpr.dir/depend +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/src/version /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/DependInfo.cmake --color= +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/tinyexpr /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr/CMakeFiles/tinyexpr.dir/DependInfo.cmake --color= Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp/CMakeFiles/alp.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp/CMakeFiles/alp.dir/depend.internal". Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp/CMakeFiles/alp.dir/depend.internal". -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/lib/tinyexpr /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr/CMakeFiles/tinyexpr.dir/DependInfo.cmake --color= -make -f lib/cacode/CMakeFiles/cacode.dir/build.make lib/cacode/CMakeFiles/cacode.dir/build -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -[ 1%] Building C object lib/microtar/CMakeFiles/microtar.dir/microtar.c.o +Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/depend.internal". +Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar/CMakeFiles/microtar.dir/depend.internal". Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data/CMakeFiles/generated.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data/CMakeFiles/generated.dir/depend.internal". Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/data/CMakeFiles/generated.dir/depend.internal". Scanning dependencies of target generated -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar && /usr/bin/cc -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/microtar.dir/microtar.c.o -c /build/mmseqs2-12-113e3+ds/lib/microtar/microtar.c -Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/depend.internal". +Scanning dependencies of target microtar +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +make -f data/CMakeFiles/generated.dir/build.make data/CMakeFiles/generated.dir/build +Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/depend.internal". +Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode/CMakeFiles/cacode.dir/depend.internal". Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2/CMakeFiles/ksw2.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2/CMakeFiles/ksw2.dir/depend.internal". -Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/depend.internal". Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2/CMakeFiles/ksw2.dir/depend.internal". -Scanning dependencies of target version -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/build -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make -f data/CMakeFiles/generated.dir/build.make data/CMakeFiles/generated.dir/build +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +Scanning dependencies of target cacode +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +make -f lib/microtar/CMakeFiles/microtar.dir/build.make lib/microtar/CMakeFiles/microtar.dir/build Scanning dependencies of target ksw2 -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +make -f lib/ksw2/CMakeFiles/ksw2.dir/build.make lib/ksw2/CMakeFiles/ksw2.dir/build +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +make -f lib/cacode/CMakeFiles/cacode.dir/build.make lib/cacode/CMakeFiles/cacode.dir/build +Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/depend.internal". +Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version/CMakeFiles/version.dir/depend.internal". Scanning dependencies of target alp +Scanning dependencies of target version +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +make -f lib/alp/CMakeFiles/alp.dir/build.make lib/alp/CMakeFiles/alp.dir/build +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/build +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr/CMakeFiles/tinyexpr.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr/CMakeFiles/tinyexpr.dir/depend.internal". Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr/CMakeFiles/tinyexpr.dir/depend.internal". Scanning dependencies of target tinyexpr -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make -f lib/alp/CMakeFiles/alp.dir/build.make lib/alp/CMakeFiles/alp.dir/build -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten make -f lib/tinyexpr/CMakeFiles/tinyexpr.dir/build.make lib/tinyexpr/CMakeFiles/tinyexpr.dir/build -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -[ 2%] Building CXX object lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o -make -f lib/ksw2/CMakeFiles/ksw2.dir/build.make lib/ksw2/CMakeFiles/ksw2.dir/build +[ 1%] Building C object lib/microtar/CMakeFiles/microtar.dir/microtar.c.o +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +[ 2%] Generating ../generated/VTML40.out.h [ 2%] 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Building C object lib/tinyexpr/CMakeFiles/tinyexpr.dir/tinyexpr.c.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr && /usr/bin/cc -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ansi -Wall -Wshadow -fPIC -O3 -o CMakeFiles/tinyexpr.dir/tinyexpr.c.o -c /build/mmseqs2-12-113e3+ds/lib/tinyexpr/tinyexpr.c [ 2%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_dynprogprob.cpp.o +[ 3%] Building CXX object lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o +cd /build/mmseqs2-12-113e3+ds/data && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_dynprogprob.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_dynprogprob.cpp -[ 3%] Generating ../generated/VTML40.out.h -cd /build/mmseqs2-12-113e3+ds/data && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true VTML40.out +[ 3%] Building CXX object lib/ksw2/CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/ksw2 && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -o CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/ksw2/ksw2_extz2_sse.cpp cd /build/mmseqs2-12-113e3+ds/data && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -o CMakeFiles/cacode.dir/lambda_calculator.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/cacode/lambda_calculator.cpp +[ 3%] Building CXX object src/version/CMakeFiles/version.dir/Version.cpp.o cd /build/mmseqs2-12-113e3+ds/data && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl VTML40.out > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/VTML40.out.h -[ 3%] Building CXX object lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr 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/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/VTML40.out.h.tmp cd /build/mmseqs2-12-113e3+ds/data && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/VTML40.out.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/VTML40.out.h -[ 4%] Linking C static library libmicrotar.a -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake -/usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o -/usr/bin/ranlib libversion.a -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 -[ 4%] Generating ../generated/nucleotide.out.h -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +cd /build/mmseqs2-12-113e3+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/VTML80.out.h > 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/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h.tmp -cd /build/mmseqs2-12-113e3+ds/data && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h -[ 4%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_random.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_random.cpp -[ 4%] Built target microtar -[ 5%] Generating ../generated/blosum62.out.h +cd /build/mmseqs2-12-113e3+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h.tmp +[ 4%] Generating ../generated/blosum62.out.h cd /build/mmseqs2-12-113e3+ds/data && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true blosum62.out +[ 5%] Linking CXX static library libversion.a +cd /build/mmseqs2-12-113e3+ds/data && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide.out.h +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake +cd /build/mmseqs2-12-113e3+ds/data && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl blosum62.out > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h +cd /build/mmseqs2-12-113e3+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h.tmp [ 5%] Generating ../generated/PAM30.out.h +cd /build/mmseqs2-12-113e3+ds/data && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h cd /build/mmseqs2-12-113e3+ds/data && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true PAM30.out +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 cd /build/mmseqs2-12-113e3+ds/data && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl blosum62.out > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h cd /build/mmseqs2-12-113e3+ds/data && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl PAM30.out > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/PAM30.out.h -cd /build/mmseqs2-12-113e3+ds/data && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h.tmp -cd /build/mmseqs2-12-113e3+ds/data && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/PAM30.out.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/PAM30.out.h.tmp -cd /build/mmseqs2-12-113e3+ds/data && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blosum62.out.h +/usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o +/usr/bin/ranlib libversion.a +cd /build/mmseqs2-12-113e3+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/PAM30.out.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/PAM30.out.h.tmp cd /build/mmseqs2-12-113e3+ds/data && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/PAM30.out.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/PAM30.out.h -[ 6%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_dynprogprobproto.cpp -[ 7%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h -[ 7%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h -cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true CovSeqidQscPercMinDiagTargetCov.lib +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +[ 6%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h +[ 6%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib +cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true CovSeqidQscPercMinDiagTargetCov.lib cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +[ 6%] Built target version cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiag.lib.h -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiag.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiag.lib.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h +[ 6%] Building CXX object lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -o CMakeFiles/cacode.dir/lubksb.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/cacode/lubksb.cpp +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiagTargetCov.lib.h +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiag.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiag.lib.h.tmp cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiag.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/CovSeqidQscPercMinDiag.lib.h -[ 7%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h +[ 6%] Linking C static library libmicrotar.a +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake +[ 6%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -[ 8%] Generating ../generated/Library255_may17.lib.h +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl ExpOpt3_8_polished.cs32.lib > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/ExpOpt3_8_polished.cs32.lib.h +/usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o +[ 7%] Generating ../generated/Library255_may17.lib.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true Library255_may17.lib +/usr/bin/ranlib libmicrotar.a +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/ExpOpt3_8_polished.cs32.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/ExpOpt3_8_polished.cs32.lib.h.tmp +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl Library255_may17.lib > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/Library255_may17.lib.h -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/ExpOpt3_8_polished.cs32.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/ExpOpt3_8_polished.cs32.lib.h.tmp -[ 9%] Building CXX object lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -o CMakeFiles/cacode.dir/nrutil.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/cacode/nrutil.cpp +[ 7%] Building CXX object lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/ExpOpt3_8_polished.cs32.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/ExpOpt3_8_polished.cs32.lib.h -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/Library255_may17.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/Library255_may17.lib.h.tmp +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -o CMakeFiles/cacode.dir/ludcmp.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/cacode/ludcmp.cpp +[ 7%] Built target microtar +[ 8%] Building CXX object lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/cacode && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -o CMakeFiles/cacode.dir/nrutil.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/cacode/nrutil.cpp +[ 8%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/Library255_may17.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/Library255_may17.lib.h.tmp +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_random.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_random.cpp cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/Library255_may17.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/Library255_may17.lib.h -[ 9%] Generating ../generated/libPolished_8.lib.h +[ 8%] Generating ../generated/libPolished_8.lib.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true libPolished_8.lib cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl libPolished_8.lib > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h +[ 9%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_dynprogprobproto.cpp [ 10%] Generating ../generated/cs219.lib.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true cs219.lib -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h.tmp cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/libPolished_8.lib.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl cs219.lib > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h.tmp +[ 10%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_localmaxstat.cpp +cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h [ 10%] Generating ../generated/krona_prelude.html.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true krona_prelude.html +[ 11%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_localmaxstatmatrix.cpp cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h.tmp cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl krona_prelude.html > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h -cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cs219.lib.h -[ 10%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_localmaxstat.cpp -[ 11%] Generating ../generated/result_viz_prelude.html.zst.h +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h +[ 12%] Generating ../generated/result_viz_prelude.html.zst.h cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true result_viz_prelude.html.zst -[ 12%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_localmaxstatmatrix.cpp cd /build/mmseqs2-12-113e3+ds/data/resources && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/resources && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl result_viz_prelude.html.zst > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/result_viz_prelude.html.zst.h -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/resources && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/result_viz_prelude.html.zst.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/result_viz_prelude.html.zst.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/krona_prelude.html.h +[ 12%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alp_sim.cpp +cd /build/mmseqs2-12-113e3+ds/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/result_viz_prelude.html.zst.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/result_viz_prelude.html.zst.h.tmp cd /build/mmseqs2-12-113e3+ds/data/resources && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/result_viz_prelude.html.zst.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/result_viz_prelude.html.zst.h [ 12%] Generating ../generated/easysearch.sh.h -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true easysearch.sh -[ 12%] Generating ../generated/easycluster.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true easycluster.sh -cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -[ 12%] Built target cacode cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl easysearch.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easysearch.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl easycluster.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h -[ 12%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alp_sim.cpp [ 13%] Linking C static library libtinyexpr.a cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easysearch.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easysearch.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easysearch.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easysearch.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easysearch.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easysearch.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 /usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o +[ 13%] Generating ../generated/easycluster.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true easycluster.sh +cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl easycluster.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h.tmp /usr/bin/ranlib libtinyexpr.a -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easycluster.sh.h +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +[ 13%] Built target tinyexpr [ 14%] Generating ../generated/easytaxonomy.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true easytaxonomy.sh +cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl easytaxonomy.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h [ 14%] Generating ../generated/easyrbh.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true easyrbh.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl easytaxonomy.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h -[ 14%] Built target tinyexpr cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl easyrbh.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easyrbh.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easyrbh.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easyrbh.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easytaxonomy.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easyrbh.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easyrbh.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easyrbh.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/easyrbh.sh.h [ 15%] Generating ../generated/blastp.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true blastp.sh +cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated [ 15%] Generating ../generated/blastpgp.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true blastpgp.sh -[ 16%] Generating ../generated/map.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true map.sh -cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl blastp.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastp.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl blastpgp.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastpgp.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl map.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastp.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastp.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastp.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastp.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastp.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastp.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastpgp.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastpgp.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h -[ 17%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_pvalues.cpp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastpgp.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastpgp.sh.h.tmp +[ 16%] Generating ../generated/map.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true map.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastpgp.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastpgp.sh.h -[ 17%] Generating ../generated/rbh.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl map.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h +[ 16%] Generating ../generated/rbh.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true rbh.sh +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/map.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl rbh.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h -[ 17%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_dynprogproblim.cpp -[ 18%] Generating ../generated/linclust.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h +[ 17%] Generating ../generated/linclust.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true linclust.sh -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/rbh.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl linclust.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linclust.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linclust.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linclust.sh.h.tmp -[ 18%] Generating ../generated/clustering.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linclust.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linclust.sh.h.tmp +[ 17%] Generating ../generated/clustering.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true clustering.sh +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linclust.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linclust.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +[ 17%] Built target cacode cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl clustering.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h +[ 18%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o [ 18%] Generating ../generated/cascaded_clustering.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true cascaded_clustering.sh -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h.tmp -[ 18%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alignment_evaluer.cpp +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_pvalues.cpp cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl cascaded_clustering.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cascaded_clustering.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/clustering.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cascaded_clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cascaded_clustering.sh.h.tmp [ 19%] Generating ../generated/update_clustering.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true update_clustering.sh -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cascaded_clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cascaded_clustering.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cascaded_clustering.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/cascaded_clustering.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl update_clustering.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/update_clustering.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/update_clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/update_clustering.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/update_clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/update_clustering.sh.h.tmp [ 19%] Generating ../generated/searchtargetprofile.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true searchtargetprofile.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/update_clustering.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/update_clustering.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl searchtargetprofile.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchtargetprofile.sh.h -[ 20%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alp_regression.cpp -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchtargetprofile.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchtargetprofile.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchtargetprofile.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchtargetprofile.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchtargetprofile.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchtargetprofile.sh.h -[ 21%] Generating ../generated/createindex.sh.h +[ 20%] Generating ../generated/createindex.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true createindex.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl createindex.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h -[ 21%] Generating ../generated/createtaxdb.sh.h +[ 20%] Generating ../generated/createtaxdb.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true createtaxdb.sh -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h.tmp -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -[ 21%] Built target ksw2 +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl createtaxdb.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createtaxdb.sh.h -[ 22%] Generating ../generated/translated_search.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createindex.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createtaxdb.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createtaxdb.sh.h.tmp +[ 21%] Generating ../generated/translated_search.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true translated_search.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl translated_search.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h.tmp -[ 22%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createtaxdb.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createtaxdb.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alp.cpp -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createtaxdb.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/createtaxdb.sh.h -[ 22%] Generating ../generated/taxonomy.sh.h -[ 23%] Generating ../generated/taxpercontig.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true taxpercontig.sh +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/translated_search.sh.h +[ 21%] Generating ../generated/taxonomy.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true taxonomy.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl taxonomy.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h +[ 22%] Generating ../generated/taxpercontig.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true taxpercontig.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl taxpercontig.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl taxonomy.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxonomy.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h -[ 23%] Generating ../generated/multihitdb.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h.tmp +[ 22%] Generating ../generated/multihitdb.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true multihitdb.sh +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/taxpercontig.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -[ 23%] Generating ../generated/multihitsearch.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true multihitsearch.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl multihitdb.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h +[ 22%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_dynprogproblim.cpp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h +[ 22%] Generating ../generated/multihitsearch.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true multihitsearch.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl multihitsearch.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitsearch.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitdb.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitsearch.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitsearch.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitsearch.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitsearch.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitsearch.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/multihitsearch.sh.h -[ 24%] Generating ../generated/enrich.sh.h +[ 23%] Generating ../generated/enrich.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true enrich.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl enrich.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/enrich.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/enrich.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/enrich.sh.h.tmp -[ 24%] Generating ../generated/blastn.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true blastn.sh +[ 23%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alignment_evaluer.cpp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/enrich.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/enrich.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/enrich.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/enrich.sh.h +[ 23%] Generating ../generated/blastn.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true blastn.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl blastn.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastn.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastn.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastn.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastn.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastn.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastn.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/blastn.sh.h -[ 25%] Generating ../generated/searchslicedtargetprofile.sh.h +[ 24%] Generating ../generated/searchslicedtargetprofile.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true searchslicedtargetprofile.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h +[ 25%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alp_regression.cpp [ 25%] Generating ../generated/linsearch.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true linsearch.sh -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl linsearch.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linsearch.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/searchslicedtargetprofile.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linsearch.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linsearch.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linsearch.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linsearch.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linsearch.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/linsearch.sh.h [ 26%] Generating ../generated/databases.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true databases.sh +cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated +cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl databases.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h.tmp +cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h [ 26%] Generating ../generated/nucleotide_clustering.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/checkshell.sh true nucleotide_clustering.sh cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && mkdir -p /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl databases.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h cd /build/mmseqs2-12-113e3+ds/data/workflow && /build/mmseqs2-12-113e3+ds/cmake/xxdi.pl nucleotide_clustering.sh > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide_clustering.sh.h -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && /bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide_clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide_clustering.sh.h.tmp -cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/databases.sh.h +cd /build/mmseqs2-12-113e3+ds/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide_clustering.sh.h > /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide_clustering.sh.h.tmp cd /build/mmseqs2-12-113e3+ds/data/workflow && mv -f /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide_clustering.sh.h.tmp /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated/nucleotide_clustering.sh.h -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +[ 26%] Built target generated +[ 26%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o +cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_alp.cpp [ 27%] Building CXX object lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/njn_localmaxstatutil.cpp -[ 27%] Built target generated +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +[ 27%] Built target ksw2 [ 27%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -w -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/mmseqs2-12-113e3+ds/lib/alp/sls_basic.cpp [ 28%] Building CXX object lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/lib/alp && /usr/bin/c++ -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. 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CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o CMakeFiles/mmseqs-framework.dir/workflow/TaxPerContig.cpp.o CMakeFiles/mmseqs-framework.dir/workflow/EasyTaxonomy.cpp.o CMakeFiles/mmseqs-framework.dir/workflow/CreateIndex.cpp.o CMakeFiles/mmseqs-framework.dir/MMseqsBase.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_dynprogprob.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o ../lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o ../lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o ../lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o ../lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o ../lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o ../lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o ../lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o ../lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o ../lib/ksw2/CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o ../lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o ../lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o ../lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o ../lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o /usr/bin/ranlib libmmseqs-framework.a -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten [ 99%] Built target mmseqs-framework make -f src/CMakeFiles/mmseqs.dir/build.make src/CMakeFiles/mmseqs.dir/depend -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/mmseqs2-12-113e3+ds /build/mmseqs2-12-113e3+ds/src /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/CMakeFiles/mmseqs.dir/DependInfo.cmake --color= Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/CMakeFiles/mmseqs.dir/DependInfo.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/CMakeFiles/mmseqs.dir/depend.internal". Dependee "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src/CMakeFiles/mmseqs.dir/depend.internal". Scanning dependencies of target mmseqs -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten make -f src/CMakeFiles/mmseqs.dir/build.make src/CMakeFiles/mmseqs.dir/build -make[4]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan [100%] Building CXX object src/CMakeFiles/mmseqs.dir/mmseqs.cpp.o cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DHAVE_ZLIB=1 -DOPENMP=1 -I/build/mmseqs2-12-113e3+ds/lib/tinyexpr -I/build/mmseqs2-12-113e3+ds/lib/microtar -I/build/mmseqs2-12-113e3+ds/lib/simde -I/build/mmseqs2-12-113e3+ds/lib -I/build/mmseqs2-12-113e3+ds/lib/simd -I/build/mmseqs2-12-113e3+ds/lib/alp -I/build/mmseqs2-12-113e3+ds/lib/cacode -I/build/mmseqs2-12-113e3+ds/lib/ksw2 -I/build/mmseqs2-12-113e3+ds/lib/xxhash -I/build/mmseqs2-12-113e3+ds/lib/ips4o -I/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/generated -I/build/mmseqs2-12-113e3+ds/src/alignment -I/build/mmseqs2-12-113e3+ds/src/clustering -I/build/mmseqs2-12-113e3+ds/src/commons -I/build/mmseqs2-12-113e3+ds/src/multihit -I/build/mmseqs2-12-113e3+ds/src/prefiltering -I/build/mmseqs2-12-113e3+ds/src/linclust -I/build/mmseqs2-12-113e3+ds/src/taxonomy -I/build/mmseqs2-12-113e3+ds/src/util -I/build/mmseqs2-12-113e3+ds/src/. -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -o CMakeFiles/mmseqs.dir/mmseqs.cpp.o -c /build/mmseqs2-12-113e3+ds/src/mmseqs.cpp [100%] Linking CXX executable mmseqs cd /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmseqs.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/mmseqs2-12-113e3+ds=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic -std=c++1y -fsigned-char -D_GNU_SOURCE=1 -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp CMakeFiles/mmseqs.dir/mmseqs.cpp.o -o mmseqs libmmseqs-framework.a version/libversion.a -latomic ../lib/tinyexpr/libtinyexpr.a -lm -lzstd ../lib/microtar/libmicrotar.a -lgzstream -lz -lbz2 -make[4]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target mmseqs -make[3]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[3]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/cmake -E cmake_progress_start /build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu/CMakeFiles 0 -make[2]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make[1]: Leaving directory '/build/mmseqs2-12-113e3+ds' +make[2]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt verlaten dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install-arch -make[1]: Entering directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt binnengegaan dh_auto_install cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/mmseqs2-12-113e3\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" -make[2]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[2]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/mmseqs2-12-113e3+ds -B/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall -make[3]: Entering directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' -make[3]: Nothing to be done for 'preinstall'. -make[3]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[3]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt binnengegaan +make[3]: Er hoeft niets gedaan te worden voor 'preinstall'. +make[3]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/mmseqs2-12-113e3+ds/debian/tmp/usr/bin/mmseqs -make[2]: Leaving directory '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' +make[2]: Map '/build/mmseqs2-12-113e3+ds/obj-aarch64-linux-gnu' wordt verlaten dh_install -pmmseqs2 usr/bin/mmseqs usr/bin/ -make[1]: Leaving directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt verlaten debian/rules override_dh_install-arch -make[1]: Entering directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt binnengegaan dh_install --arch mkdir -p debian/mmseqs2/usr/lib/mmseqs2/test cp src/test/*.index debian/mmseqs2/usr/lib/mmseqs2/test/ @@ -1345,15 +1416,15 @@ rm -rf debian/mmseqs2/usr/lib/mmseqs2/test/CMakeFiles \ debian/mmseqs2/usr/lib/mmseqs2/test/*.cmake \ debian/mmseqs2/usr/lib/mmseqs2/test/Makefile -make[1]: Leaving directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt verlaten debian/rules override_dh_install-indep -make[1]: Entering directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt binnengegaan dh_install --indep # We also remove unneeded files & folders like CMake rm -rf debian/mmseqs2-examples/usr/share/doc/mmseqs2/example-data/*.lib \ debian/mmseqs2-examples/usr/share/doc/mmseqs2/example-data/CovSeqidQscPercMinDiag.out \ debian/mmseqs2-examples/usr/share/doc/mmseqs2/example-data/CovSeqidQscPercMinDiagTargetCov.out -make[1]: Leaving directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt verlaten dh_installdocs dh_installchangelogs dh_installman @@ -1369,14 +1440,14 @@ dh_shlibdeps -a dh_installdeb debian/rules override_dh_gencontrol -make[1]: Entering directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt binnengegaan dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.7.2-4), " -make[1]: Leaving directory '/build/mmseqs2-12-113e3+ds' +make[1]: Map '/build/mmseqs2-12-113e3+ds' wordt verlaten dh_md5sums dh_builddeb -dpkg-deb: building package 'mmseqs2-dbgsym' in '../mmseqs2-dbgsym_12-113e3+ds-3_arm64.deb'. -dpkg-deb: building package 'mmseqs2' in '../mmseqs2_12-113e3+ds-3_arm64.deb'. -dpkg-deb: building package 'mmseqs2-examples' in '../mmseqs2-examples_12-113e3+ds-3_all.deb'. +dpkg-deb: pakket 'mmseqs2-examples' wordt gebouwd in '../mmseqs2-examples_12-113e3+ds-3_all.deb'. +dpkg-deb: pakket 'mmseqs2' wordt gebouwd in '../mmseqs2_12-113e3+ds-3_arm64.deb'. +dpkg-deb: pakket 'mmseqs2-dbgsym' wordt gebouwd in '../mmseqs2-dbgsym_12-113e3+ds-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../mmseqs2_12-113e3+ds-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1384,12 +1455,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/10809/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/10809/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3082 and its subdirectories -I: Current time: Thu Aug 25 17:26:43 -12 2022 -I: pbuilder-time-stamp: 1661491603 +I: removing directory /srv/workspace/pbuilder/10809 and its subdirectories +I: Current time: Sat Jul 24 13:23:04 +14 2021 +I: pbuilder-time-stamp: 1627082584