Diff of the two buildlogs: -- --- b1/build.log 2024-01-10 22:03:30.064101260 +0000 +++ b2/build.log 2024-01-10 22:07:09.927505702 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Jan 10 09:57:31 -12 2024 -I: pbuilder-time-stamp: 1704923851 +I: Current time: Wed Feb 12 18:26:27 +14 2025 +I: pbuilder-time-stamp: 1739334387 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -18,7 +18,7 @@ I: copying [./hmmer_3.3.2+dfsg-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.z8KYKa1m/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.AerE01I0/trustedkeys.kbx': General error gpgv: Signature made Thu Dec 31 10:50:45 2020 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key @@ -36,51 +36,82 @@ dpkg-source: info: applying spelling I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2770/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/D01_modify_environment starting +debug: Running on ionos16-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 12 04:26 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='5d60484e101f40cf93bdf174b79c006a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2770' - PS1='# ' - PS2='> ' + INVOCATION_ID=12f88c3750bb4d148c55bb4c40d6f61b + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=66307 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Jzu8ZvZ1/pbuilderrc_bOTg --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Jzu8ZvZ1/b1 --logfile b1/build.log hmmer_3.3.2+dfsg-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Jzu8ZvZ1/pbuilderrc_BLsf --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Jzu8ZvZ1/b2 --logfile b2/build.log hmmer_3.3.2+dfsg-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos12-i386 6.1.0-17-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) i686 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Mar 27 2022 bash @@ -140,7 +171,7 @@ -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jan 7 09:27 sh -> dash + lrwxrwxrwx 1 root root 9 Feb 12 04:26 sh -> /bin/bash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Jan 20 2022 su @@ -166,7 +197,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/2770/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -252,7 +283,7 @@ Get: 44 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 libdivsufsort3 i386 2.0.1-5 [49.5 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 libdivsufsort-dev i386 2.0.1-5 [19.1 kB] -Fetched 24.4 MB in 3s (8143 kB/s) +Fetched 24.4 MB in 0s (96.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17763 files and directories currently installed.) @@ -413,8 +444,8 @@ Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Jan 10 21:57:54 UTC 2024. -Universal Time is now: Wed Jan 10 21:57:54 UTC 2024. +Local time is now: Wed Feb 12 04:26:45 UTC 2025. +Universal Time is now: Wed Feb 12 04:26:45 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20180224.1+nmu1) ... @@ -460,7 +491,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/hmmer-3.3.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../hmmer_3.3.2+dfsg-1_source.changes +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/hmmer-3.3.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../hmmer_3.3.2+dfsg-1_source.changes dpkg-buildpackage: info: source package hmmer dpkg-buildpackage: info: source version 3.3.2+dfsg-1 dpkg-buildpackage: info: source distribution unstable @@ -666,7 +701,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg' export V=VERBOSE ; dh_auto_build - make -j8 + make -j15 make[2]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg' make -C easel all make[3]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg/easel' @@ -742,12 +777,12 @@ gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_subcmd.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_threads.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_tree.c -gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_varint.c -gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_vectorops.c In file included from esl_threads.c:24: /usr/include/i386-linux-gnu/sys/sysctl.h:21:2: warning: #warning "The header is deprecated and will be removed." [-Wcpp] 21 | #warning "The header is deprecated and will be removed." | ^~~~~~~ +gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_varint.c +gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_vectorops.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_weibull.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_workqueue.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -c esl_wuss.c @@ -928,40 +963,40 @@ make[1]: Leaving directory '/build/reproducible-path/hmmer-3.3.2+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg' -export V=VERBOSE ; make check -j10 | tee debian/test_log +export V=VERBOSE ; make check -j18 | tee debian/test_log make[2]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg' make -C easel tests make[3]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg/easel' +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_alphabet_utest -I. -I. -L. -DeslALPHABET_TESTDRIVE ./esl_alphabet.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o easel_utest -I. -I. -L. -DeslEASEL_TESTDRIVE ./easel.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_alloc_utest -I. -I. -L. -DeslALLOC_TESTDRIVE ./esl_alloc.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_bitfield_utest -I. -I. -L. -DeslBITFIELD_TESTDRIVE ./esl_bitfield.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_alphabet_utest -I. -I. -L. -DeslALPHABET_TESTDRIVE ./esl_alphabet.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_buffer_utest -I. -I. -L. -DeslBUFFER_TESTDRIVE ./esl_buffer.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o easel_utest -I. -I. -L. -DeslEASEL_TESTDRIVE ./easel.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_cluster_utest -I. -I. -L. -DeslCLUSTER_TESTDRIVE ./esl_cluster.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_cpu_utest -I. -I. -L. -DeslCPU_TESTDRIVE ./esl_cpu.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dirichlet_utest -I. -I. -L. -DeslDIRICHLET_TESTDRIVE ./esl_dirichlet.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_distance_utest -I. -I. -L. -DeslDISTANCE_TESTDRIVE ./esl_distance.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dmatrix_utest -I. -I. -L. -DeslDMATRIX_TESTDRIVE ./esl_dmatrix.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dsqdata_utest -I. -I. -L. -DeslDSQDATA_TESTDRIVE ./esl_dsqdata.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_cpu_utest -I. -I. -L. -DeslCPU_TESTDRIVE ./esl_cpu.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_exponential_utest -I. -I. -L. -DeslEXPONENTIAL_TESTDRIVE ./esl_exponential.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_fileparser_utest -I. -I. -L. -DeslFILEPARSER_TESTDRIVE ./esl_fileparser.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dirichlet_utest -I. -I. -L. -DeslDIRICHLET_TESTDRIVE ./esl_dirichlet.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_gamma_utest -I. -I. -L. -DeslGAMMA_TESTDRIVE ./esl_gamma.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dsqdata_utest -I. -I. -L. -DeslDSQDATA_TESTDRIVE ./esl_dsqdata.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_gencode_utest -I. -I. -L. -DeslGENCODE_TESTDRIVE ./esl_gencode.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_graph_utest -I. -I. -L. -DeslGRAPH_TESTDRIVE ./esl_graph.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dmatrix_utest -I. -I. -L. -DeslDMATRIX_TESTDRIVE ./esl_dmatrix.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_getopts_utest -I. -I. -L. -DeslGETOPTS_TESTDRIVE ./esl_getopts.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_gumbel_utest -I. -I. -L. -DeslGUMBEL_TESTDRIVE ./esl_gumbel.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_graph_utest -I. -I. -L. -DeslGRAPH_TESTDRIVE ./esl_graph.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_heap_utest -I. -I. -L. -DeslHEAP_TESTDRIVE ./esl_heap.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_histogram_utest -I. -I. -L. -DeslHISTOGRAM_TESTDRIVE ./esl_histogram.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_hmm_utest -I. -I. -L. -DeslHMM_TESTDRIVE ./esl_hmm.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_huffman_utest -I. -I. -L. -DeslHUFFMAN_TESTDRIVE ./esl_huffman.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_hmm_utest -I. -I. -L. -DeslHMM_TESTDRIVE ./esl_hmm.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_hyperexp_utest -I. -I. -L. -DeslHYPEREXP_TESTDRIVE ./esl_hyperexp.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_json_utest -I. -I. -L. -DeslJSON_TESTDRIVE ./esl_json.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_keyhash_utest -I. -I. -L. -DeslKEYHASH_TESTDRIVE ./esl_keyhash.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_matrixops_utest -I. -I. -L. -DeslMATRIXOPS_TESTDRIVE ./esl_matrixops.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_mem_utest -I. -I. -L. -DeslMEM_TESTDRIVE ./esl_mem.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_minimizer_utest -I. -I. -L. -DeslMINIMIZER_TESTDRIVE ./esl_minimizer.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msa_utest -I. -I. -L. -DeslMSA_TESTDRIVE ./esl_msa.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_mixdchlet_utest -I. -I. -L. -DeslMIXDCHLET_TESTDRIVE ./esl_mixdchlet.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msa_utest -I. -I. -L. -DeslMSA_TESTDRIVE ./esl_msa.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msacluster_utest -I. -I. -L. -DeslMSACLUSTER_TESTDRIVE ./esl_msacluster.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_utest -I. -I. -L. -DeslMSAFILE_TESTDRIVE ./esl_msafile.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile2_utest -I. -I. -L. -DeslMSAFILE2_TESTDRIVE ./esl_msafile2.c -leasel -lm @@ -976,8 +1011,8 @@ gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_normal_utest -I. -I. -L. -DeslNORMAL_TESTDRIVE ./esl_normal.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_quicksort_utest -I. -I. -L. -DeslQUICKSORT_TESTDRIVE ./esl_quicksort.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_random_utest -I. -I. -L. -DeslRANDOM_TESTDRIVE ./esl_random.c -leasel -lm -gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_randomseq_utest -I. -I. -L. -DeslRANDOMSEQ_TESTDRIVE ./esl_randomseq.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_rand64_utest -I. -I. -L. -DeslRAND64_TESTDRIVE ./esl_rand64.c -leasel -lm +gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_randomseq_utest -I. -I. -L. -DeslRANDOMSEQ_TESTDRIVE ./esl_randomseq.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_ratematrix_utest -I. -I. -L. -DeslRATEMATRIX_TESTDRIVE ./esl_ratematrix.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_red_black_utest -I. -I. -L. -DeslRED_BLACK_TESTDRIVE ./esl_red_black.c -leasel -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_recorder_utest -I. -I. -L. -DeslRECORDER_TESTDRIVE ./esl_recorder.c -leasel -lm @@ -1012,30 +1047,30 @@ make[4]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg/src/impl_sse' make[4]: 'libhmmer-impl.stamp' is up to date. make[4]: Leaving directory '/build/reproducible-path/hmmer-3.3.2+dfsg/src/impl_sse' +{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7BUILD_TESTDRIVE -o build_utest ./build.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_FWDBACK_TESTDRIVE -o generic_fwdback_utest ./generic_fwdback.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_FWDBACK_CHK_TESTDRIVE -o generic_fwdback_chk_utest ./generic_fwdback_chk.c -lhmmer -leasel -ldivsufsort -lm -{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7BUILD_TESTDRIVE -o build_utest ./build.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_MSV_TESTDRIVE -o generic_msv_utest ./generic_msv.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_STOTRACE_TESTDRIVE -o generic_stotrace_utest ./generic_stotrace.c -lhmmer -leasel -ldivsufsort -lm -{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7MODELCONFIG_TESTDRIVE -o modelconfig_utest ./modelconfig.c -lhmmer -leasel -ldivsufsort -lm -{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMER_TESTDRIVE -o hmmer_utest ./hmmer.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7LOGSUM_TESTDRIVE -o logsum_utest ./logsum.c -lhmmer -leasel -ldivsufsort -lm -{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_VITERBI_TESTDRIVE -o generic_viterbi_utest ./generic_viterbi.c -lhmmer -leasel -ldivsufsort -lm -{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7SEQMODEL_TESTDRIVE -o seqmodel_utest ./seqmodel.c -lhmmer -leasel -ldivsufsort -lm +{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMER_TESTDRIVE -o hmmer_utest ./hmmer.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7ALIDISPLAY_TESTDRIVE -o p7_alidisplay_utest ./p7_alidisplay.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7BG_TESTDRIVE -o p7_bg_utest ./p7_bg.c -lhmmer -leasel -ldivsufsort -lm +{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7MODELCONFIG_TESTDRIVE -o modelconfig_utest ./modelconfig.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7DOMAIN_TESTDRIVE -o p7_domain_utest ./p7_domain.c -lhmmer -leasel -ldivsufsort -lm +{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_VITERBI_TESTDRIVE -o generic_viterbi_utest ./generic_viterbi.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GMX_TESTDRIVE -o p7_gmx_utest ./p7_gmx.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GMXCHK_TESTDRIVE -o p7_gmxchk_utest ./p7_gmxchk.c -lhmmer -leasel -ldivsufsort -lm -{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HIT_TESTDRIVE -o p7_hit_utest ./p7_hit.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMD_SEARCH_STATS_TESTDRIVE -o p7_hmmd_search_stats_utest ./p7_hmmd_search_stats.c -lhmmer -leasel -ldivsufsort -lm +{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7SEQMODEL_TESTDRIVE -o seqmodel_utest ./seqmodel.c -lhmmer -leasel -ldivsufsort -lm +{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HIT_TESTDRIVE -o p7_hit_utest ./p7_hit.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMM_TESTDRIVE -o p7_hmm_utest ./p7_hmm.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMFILE_TESTDRIVE -o p7_hmmfile_utest ./p7_hmmfile.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7PROFILE_TESTDRIVE -o p7_profile_utest ./p7_profile.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7TOPHITS_TESTDRIVE -o p7_tophits_utest ./p7_tophits.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7TRACE_TESTDRIVE -o p7_trace_utest ./p7_trace.c -lhmmer -leasel -ldivsufsort -lm -{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMPGMD2MSA_TESTDRIVE -o hmmpgmd2msa_utest ./hmmpgmd2msa.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7SCOREDATA_TESTDRIVE -o p7_scoredata_utest ./p7_scoredata.c -lhmmer -leasel -ldivsufsort -lm +{CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMPGMD2MSA_TESTDRIVE -o hmmpgmd2msa_utest ./hmmpgmd2msa.c -lhmmer -leasel -ldivsufsort -lm {CC} -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMD_SEARCH_STATUS_TESTDRIVE -o hmmd_search_status_utest ./hmmd_search_status.c -lhmmer -leasel -ldivsufsort -lm gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o itest_brute itest_brute.o -lhmmer -leasel -ldivsufsort -lm make -C impl_sse tests @@ -1045,8 +1080,8 @@ gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7IO_TESTDRIVE -o io_utest ./io.c -lhmmer -leasel -lm gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7MSVFILTER_TESTDRIVE -o msvfilter_utest ./msvfilter.c -lhmmer -leasel -lm gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7NULL2_TESTDRIVE -o null2_utest ./null2.c -lhmmer -leasel -lm -gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7STOTRACE_TESTDRIVE -o stotrace_utest ./stotrace.c -lhmmer -leasel -lm gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7OPTACC_TESTDRIVE -o optacc_utest ./optacc.c -lhmmer -leasel -lm +gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7STOTRACE_TESTDRIVE -o stotrace_utest ./stotrace.c -lhmmer -leasel -lm gcc -g -O2 -fdebug-prefix-map=/build/reproducible-path/hmmer-3.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -flto -O3 -pthread -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7VITFILTER_TESTDRIVE -o vitfilter_utest ./vitfilter.c -lhmmer -leasel -lm make[4]: Leaving directory '/build/reproducible-path/hmmer-3.3.2+dfsg/src/impl_sse' make[3]: Leaving directory '/build/reproducible-path/hmmer-3.3.2+dfsg/src' @@ -1150,8 +1185,8 @@ System information: -Wed Jan 10 10:02:08 -12 2024 -Linux ionos12-i386 6.1.0-17-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) i686 GNU/Linux +Wed Feb 12 18:28:54 +14 2025 +Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux make[4]: Leaving directory '/build/reproducible-path/hmmer-3.3.2+dfsg/easel/testsuite' make[3]: Leaving directory '/build/reproducible-path/hmmer-3.3.2+dfsg/easel' make -C testsuite check @@ -1471,8 +1506,8 @@ System information: -Wed Jan 10 10:02:38 -12 2024 -Linux ionos12-i386 6.1.0-17-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) i686 GNU/Linux +Wed Feb 12 18:29:25 +14 2025 +Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux make[3]: *** [Makefile:41: check] Error 1 make[3]: Leaving directory '/build/reproducible-path/hmmer-3.3.2+dfsg/testsuite' make[2]: *** [Makefile:112: check] Error 2 @@ -1484,7 +1519,7 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg' dh_auto_install - make -j8 install DESTDIR=/build/reproducible-path/hmmer-3.3.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no + make -j15 install DESTDIR=/build/reproducible-path/hmmer-3.3.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg' SUBDIR easel make[3]: Entering directory '/build/reproducible-path/hmmer-3.3.2+dfsg/easel' @@ -1570,12 +1605,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/66307/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2770 and its subdirectories -I: Current time: Wed Jan 10 10:03:29 -12 2024 -I: pbuilder-time-stamp: 1704924209 +I: removing directory /srv/workspace/pbuilder/66307 and its subdirectories +I: Current time: Wed Feb 12 18:30:04 +14 2025 +I: pbuilder-time-stamp: 1739334604