I: pbuilder: network access will be disabled during build I: Current time: Fri Jun 9 09:38:02 +14 2023 I: pbuilder-time-stamp: 1686253082 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [packmol_20.14.0-1.dsc] I: copying [./packmol_20.14.0.orig.tar.gz] I: copying [./packmol_20.14.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Feb 4 01:42:57 2023 +14 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./packmol_20.14.0-1.dsc: no acceptable signature found dpkg-source: info: extracting packmol in packmol-20.14.0 dpkg-source: info: unpacking packmol_20.14.0.orig.tar.gz dpkg-source: info: unpacking packmol_20.14.0-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/28792/tmp/hooks/D01_modify_environment starting debug: Running on jtx1c. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jun 9 09:38 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/28792/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/28792/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=6ddc3842a303495d8fc55e5e36c9ea63 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=28792 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7FWI4qDv/pbuilderrc_s4ts --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7FWI4qDv/b2 --logfile b2/build.log --extrapackages usrmerge packmol_20.14.0-1.dsc' SUDO_GID=114 SUDO_UID=108 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 5.10.0-23-arm64 #1 SMP Debian 5.10.179-1 (2023-05-12) aarch64 GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 24 11:24 bash -rwxr-xr-x 3 root root 67144 Sep 19 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 19 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 19 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 19 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 21 2022 cat -rwxr-xr-x 1 root root 67676 Sep 21 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 21 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 21 2022 chown -rwxr-xr-x 1 root root 133532 Sep 21 2022 cp -rwxr-xr-x 1 root root 132868 Jan 6 03:20 dash -rwxr-xr-x 1 root root 133220 Sep 21 2022 date -rwxr-xr-x 1 root root 67732 Sep 21 2022 dd -rwxr-xr-x 1 root root 68104 Sep 21 2022 df -rwxr-xr-x 1 root root 133632 Sep 21 2022 dir -rwxr-xr-x 1 root root 59128 Mar 23 23:02 dmesg lrwxrwxrwx 1 root root 8 Dec 20 03:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 20 03:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 21 2022 echo -rwxr-xr-x 1 root root 41 Jan 25 04:43 egrep -rwxr-xr-x 1 root root 67548 Sep 21 2022 false -rwxr-xr-x 1 root root 41 Jan 25 04:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 23 23:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 23 22:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 25 04:43 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 10 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 20 03:33 hostname -rwxr-xr-x 1 root root 67720 Sep 21 2022 ln -rwxr-xr-x 1 root root 35132 Mar 23 23:51 login -rwxr-xr-x 1 root root 133632 Sep 21 2022 ls -rwxr-xr-x 1 root root 136808 Mar 23 23:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 21 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 21 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 21 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 23 23:02 more -rwsr-xr-x 1 root root 38496 Mar 23 23:02 mount -rwxr-xr-x 1 root root 9824 Mar 23 23:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 21 2022 mv lrwxrwxrwx 1 root root 8 Dec 20 03:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 3 20:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 21 2022 pwd lrwxrwxrwx 1 root root 4 Apr 24 11:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 21 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 21 2022 rm -rwxr-xr-x 1 root root 67600 Sep 21 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 3 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 6 09:55 sed lrwxrwxrwx 1 root root 9 Jun 9 09:38 sh -> /bin/bash -rwxr-xr-x 1 root root 67584 Sep 21 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 21 2022 stty -rwsr-xr-x 1 root root 50800 Mar 23 23:02 su -rwxr-xr-x 1 root root 67584 Sep 21 2022 sync -rwxr-xr-x 1 root root 336764 Apr 7 04:25 tar -rwxr-xr-x 1 root root 67144 Nov 3 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 21 2022 touch -rwxr-xr-x 1 root root 67548 Sep 21 2022 true -rwxr-xr-x 1 root root 9768 Mar 23 22:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 23 23:02 umount -rwxr-xr-x 1 root root 67572 Sep 21 2022 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 21 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 23 23:02 wdctl lrwxrwxrwx 1 root root 8 Dec 20 03:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/28792/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, gfortran dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19324 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 35.2 MB of archives. After unpacking 124 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf libproc2-0 armhf 2:4.0.2-3 [54.2 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf procps armhf 2:4.0.2-3 [695 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 11 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 13 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf libarchive13 armhf 3.6.2-1 [299 kB] Get: 21 http://deb.debian.org/debian bookworm/main armhf libbrotli1 armhf 1.0.9-2+b6 [271 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf libsasl2-modules-db armhf 2.1.28+dfsg-10 [19.0 kB] Get: 23 http://deb.debian.org/debian bookworm/main armhf libsasl2-2 armhf 2.1.28+dfsg-10 [52.3 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf libldap-2.5-0 armhf 2.5.13+dfsg-5 [158 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf libnghttp2-14 armhf 1.52.0-1 [60.8 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf libpsl5 armhf 0.21.2-1 [57.5 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf libssh2-1 armhf 1.10.0-3+b1 [163 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf libcurl4 armhf 7.88.1-10 [347 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf libexpat1 armhf 2.5.0-1 [79.9 kB] Get: 31 http://deb.debian.org/debian bookworm/main armhf libjsoncpp25 armhf 1.9.5-4 [68.6 kB] Get: 32 http://deb.debian.org/debian bookworm/main armhf librhash0 armhf 1.4.3-3 [146 kB] Get: 33 http://deb.debian.org/debian bookworm/main armhf libuv1 armhf 1.44.2-1 [126 kB] Get: 34 http://deb.debian.org/debian bookworm/main armhf cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main armhf cmake armhf 3.25.1-1 [4263 kB] Get: 36 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 37 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 38 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 41 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 44 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 45 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 46 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Get: 49 http://deb.debian.org/debian bookworm/main armhf libgfortran5 armhf 12.2.0-14 [246 kB] Get: 50 http://deb.debian.org/debian bookworm/main armhf libgfortran-12-dev armhf 12.2.0-14 [298 kB] Get: 51 http://deb.debian.org/debian bookworm/main armhf gfortran-12 armhf 12.2.0-14 [7633 kB] Get: 52 http://deb.debian.org/debian bookworm/main armhf gfortran armhf 4:12.2.0-3 [1424 B] Fetched 35.2 MB in 3s (11.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19324 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_armhf.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_armhf.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../04-libmagic1_1%3a5.44-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_armhf.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_armhf.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../07-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_armhf.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_armhf.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../10-libpipeline1_1.5.7-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_armhf.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_armhf.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../17-libicu72_72.1-3_armhf.deb ... Unpacking libicu72:armhf (72.1-3) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../18-libxml2_2.9.14+dfsg-1.2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ... Selecting previously unselected package libarchive13:armhf. Preparing to unpack .../19-libarchive13_3.6.2-1_armhf.deb ... Unpacking libarchive13:armhf (3.6.2-1) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../20-libbrotli1_1.0.9-2+b6_armhf.deb ... Unpacking libbrotli1:armhf (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:armhf. Preparing to unpack .../21-libsasl2-modules-db_2.1.28+dfsg-10_armhf.deb ... Unpacking libsasl2-modules-db:armhf (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:armhf. Preparing to unpack .../22-libsasl2-2_2.1.28+dfsg-10_armhf.deb ... Unpacking libsasl2-2:armhf (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:armhf. Preparing to unpack .../23-libldap-2.5-0_2.5.13+dfsg-5_armhf.deb ... Unpacking libldap-2.5-0:armhf (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:armhf. Preparing to unpack .../24-libnghttp2-14_1.52.0-1_armhf.deb ... Unpacking libnghttp2-14:armhf (1.52.0-1) ... Selecting previously unselected package libpsl5:armhf. Preparing to unpack .../25-libpsl5_0.21.2-1_armhf.deb ... Unpacking libpsl5:armhf (0.21.2-1) ... Selecting previously unselected package librtmp1:armhf. Preparing to unpack .../26-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_armhf.deb ... 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Reading state information... usrmerge is already the newest version (35). fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/28792/tmp/hooks/A99_set_merged_usr starting Re-configuring usrmerge... removed '/etc/unsupported-skip-usrmerge-conversion' The system has been successfully converted. I: user script /srv/workspace/pbuilder/28792/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/packmol-20.14.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../packmol_20.14.0-1_source.changes dpkg-buildpackage: info: source package packmol dpkg-buildpackage: info: source version 1:20.14.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The Fortran compiler identification is GNU 12.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/f95 - skipped -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/packmol-20.14.0/obj-arm-linux-gnueabihf dh_auto_build -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/packmol-20.14.0 -B/build/packmol-20.14.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/packmol-20.14.0/obj-arm-linux-gnueabihf/CMakeFiles /build/packmol-20.14.0/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' cd /build/packmol-20.14.0/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/packmol-20.14.0 /build/packmol-20.14.0 /build/packmol-20.14.0/obj-arm-linux-gnueabihf /build/packmol-20.14.0/obj-arm-linux-gnueabihf /build/packmol-20.14.0/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake --color= Dependee "/build/packmol-20.14.0/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/build/packmol-20.14.0/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/depend.internal". 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Scanning dependencies of target packmol make[3]: Leaving directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build make[3]: Entering directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/swaptypemod.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/sizes.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/ahestetic.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/exit_codes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/ahestetic.f90 -o CMakeFiles/packmol.dir/src/ahestetic.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/sizes.f90 -o CMakeFiles/packmol.dir/src/sizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/exit_codes.f90 -o CMakeFiles/packmol.dir/src/exit_codes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/swaptypemod.f90 -o CMakeFiles/packmol.dir/src/swaptypemod.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/gencan.f.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/setibox.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/flashsort.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/jacobi.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gencan.f -o CMakeFiles/packmol.dir/src/gencan.f.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setibox.f90 -o CMakeFiles/packmol.dir/src/setibox.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/flashsort.f90 -o CMakeFiles/packmol.dir/src/flashsort.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/jacobi.f90 -o CMakeFiles/packmol.dir/src/jacobi.f90.o f951: Warning: Nonconforming tab character in column 1 of line 2193 [-Wtabs] [ 23%] Building Fortran object CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/random.f90 -o CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/cmake -E cmake_copy_f90_mod ahestetic.mod CMakeFiles/packmol.dir/ahestetic.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod sizes.mod CMakeFiles/packmol.dir/sizes.mod.stamp GNU /build/packmol-20.14.0/src/gencan.f:2574:5: 2574 | 1003 format(6X,I6,T22,D17.6,T43,D17.6) | 1 Warning: Label 1003 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5662:5: 5662 | 110 IF (DABS(DX(I)).LE.XMAX) GO TO 115 | 1 Warning: Label 110 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5661:5: 5661 | 70 IF (DABS(DX(I)).GT.CUTLO) GO TO 75 | 1 Warning: Label 70 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5654:5: 5654 | 50 IF (DX(I).EQ.ZERO) GO TO 200 | 1 Warning: Label 50 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5652:5: 5652 | 30 IF (DABS(DX(I)).GT.CUTLO) GO TO 85 | 1 Warning: Label 30 at (1) defined but not used [-Wunused-label] /usr/bin/cmake -E cmake_copy_f90_mod exit_codes.mod CMakeFiles/packmol.dir/exit_codes.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod swaptypemod.mod CMakeFiles/packmol.dir/swaptypemod.mod.stamp GNU /build/packmol-20.14.0/src/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:40: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:33: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:12: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2584:71: 2584 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:3819:61: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:3819:54: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2981:19: 2981 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5179:19: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:52: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:56: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5179:12: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:71: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:64: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:525:37: 525 | double precision lastgpns(tmax) | 1 Warning: Array 'lastgpns' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] [ 28%] Building Fortran object CMakeFiles/packmol.dir/src/title.f90.o [ 28%] Building Fortran object CMakeFiles/packmol.dir/src/usegencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/usegencan.f90 -o CMakeFiles/packmol.dir/src/usegencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/title.f90 -o CMakeFiles/packmol.dir/src/title.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/ahestetic.f90.o.provides.build [ 30%] Building Fortran object CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/comparegrad.f90 -o CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/exit_codes.f90.o.provides.build [ 33%] Building Fortran object CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/compute_data.f90 -o CMakeFiles/packmol.dir/src/compute_data.f90.o [ 35%] Building Fortran object CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/flashmod.f90 -o CMakeFiles/packmol.dir/src/flashmod.f90.o [ 38%] Building Fortran object CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/input.f90 -o CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/sizes.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/swaptypemod.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/usegencan.f90.o.provides.build [ 41%] Building Fortran object CMakeFiles/packmol.dir/src/fparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/fparc.f90 -o CMakeFiles/packmol.dir/src/fparc.f90.o [ 43%] Building Fortran object CMakeFiles/packmol.dir/src/gparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gparc.f90 -o CMakeFiles/packmol.dir/src/gparc.f90.o [ 46%] Building Fortran object CMakeFiles/packmol.dir/src/gwalls.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gwalls.f90 -o CMakeFiles/packmol.dir/src/gwalls.f90.o [ 48%] Building Fortran object CMakeFiles/packmol.dir/src/comprest.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/comprest.f90 -o CMakeFiles/packmol.dir/src/comprest.f90.o [ 51%] Building Fortran object CMakeFiles/packmol.dir/app/packmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/app/packmol.f90 -o CMakeFiles/packmol.dir/app/packmol.f90.o [ 53%] Building Fortran object CMakeFiles/packmol.dir/src/polartocart.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/polartocart.f90 -o CMakeFiles/packmol.dir/src/polartocart.f90.o [ 56%] Building Fortran object CMakeFiles/packmol.dir/src/resetboxes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/resetboxes.f90 -o CMakeFiles/packmol.dir/src/resetboxes.f90.o [ 58%] Building Fortran object CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/tobar.f90 -o CMakeFiles/packmol.dir/src/tobar.f90.o [ 61%] Building Fortran object CMakeFiles/packmol.dir/src/setijk.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setijk.f90 -o CMakeFiles/packmol.dir/src/setijk.f90.o [ 64%] Building Fortran object CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/restmol.f90 -o CMakeFiles/packmol.dir/src/restmol.f90.o [ 66%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/swaptype.f90 -o CMakeFiles/packmol.dir/src/swaptype.f90.o [ 69%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/heuristics.f90 -o CMakeFiles/packmol.dir/src/heuristics.f90.o /build/packmol-20.14.0/app/packmol.f90:331:50: 331 | iratom(icart,iratcount) = iirest | ^ Warning: 'iirest' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/app/packmol.f90:50:42: 50 | integer :: i, iline, iiatom, iat, iirest, iratcount, ival | ^ note: 'iirest' was declared here [ 71%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o [ 74%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/computeg.f90 -o CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/compute_data.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/flashmod.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/input.f90.o.provides.build [ 76%] Building Fortran object CMakeFiles/packmol.dir/src/cenmass.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/cenmass.f90 -o CMakeFiles/packmol.dir/src/cenmass.f90.o [ 79%] Building Fortran object CMakeFiles/packmol.dir/src/pgencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/pgencan.f90 -o CMakeFiles/packmol.dir/src/pgencan.f90.o [ 82%] Building Fortran object CMakeFiles/packmol.dir/src/initial.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/initial.f90 -o CMakeFiles/packmol.dir/src/initial.f90.o /build/packmol-20.14.0/src/gencan.f:3346:72: 3346 | beta = rnorm2 / rnorm2prev | ^ Warning: 'rnorm2prev' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3238:24: 3238 | + rnorm2prev,snorm2,snorm2prev | ^ note: 'rnorm2prev' was declared here /build/packmol-20.14.0/src/gencan.f:3650:14: 3650 | if ( rbdtype .eq. 1 ) then | ^ Warning: 'rbdposatype' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3234:68: 3234 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposatype' was declared here /build/packmol-20.14.0/src/gencan.f:3234:56: 3234 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ Warning: 'rbdposaind' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dtw' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3237:21: 3237 | + dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2, | ^ note: 'dtw' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dtr' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3236:71: 3236 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dtr' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dnorm2' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3236:67: 3236 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dnorm2' was declared here [ 84%] Building Fortran object CMakeFiles/packmol.dir/src/setsizes.f90.o /build/packmol-20.14.0/src/gencan.f:3495:72: 3495 | amaxn = max( amax1n, amax2n ) | ^ Warning: 'amax1n' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:49: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1n' was declared here /build/packmol-20.14.0/src/gencan.f:3494:72: 3494 | amax = min( amax1 , amax2 ) | ^ Warning: 'amax1' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:42: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'alpha' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:31: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'alpha' was declared here /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setsizes.f90 -o CMakeFiles/packmol.dir/src/setsizes.f90.o /build/packmol-20.14.0/src/gencan.f:2074:72: 2074 | lamspg = sts / sty | ^ Warning: 'sty' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:1677:41: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sty' was declared here /build/packmol-20.14.0/src/gencan.f:2137:72: 2137 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: 'sts' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:1677:37: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sts' was declared here [ 87%] Building Fortran object CMakeFiles/packmol.dir/src/getinp.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/getinp.f90 -o CMakeFiles/packmol.dir/src/getinp.f90.o /build/packmol-20.14.0/src/getinp.f90:962:11: 962 | if(ires.ne.ireslast) then | ^ Warning: 'ireslast' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/getinp.f90:947:34: 947 | integer :: iread, ires, ireslast, nres, ioerr | ^ note: 'ireslast' was declared here [ 89%] Building Fortran object CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/strlength.f90 -o CMakeFiles/packmol.dir/src/strlength.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/src/output.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/output.f90 -o CMakeFiles/packmol.dir/src/output.f90.o [ 94%] Building Fortran object CMakeFiles/packmol.dir/src/checkpoint.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/checkpoint.f90 -o CMakeFiles/packmol.dir/src/checkpoint.f90.o [ 97%] Building Fortran object CMakeFiles/packmol.dir/src/writesuccess.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/writesuccess.f90 -o CMakeFiles/packmol.dir/src/writesuccess.f90.o /build/packmol-20.14.0/src/output.f90:571:32: 571 | nres = ilres - ifres + 1 | ^ Warning: 'ilres' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/output.f90:18:53: 18 | irest, iimol, ichain, iatom, irec, ilres, ifres,& | ^ note: 'ilres' was declared here [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/f95 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol make[3]: Leaving directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' [100%] Built target packmol make[2]: Leaving directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/packmol-20.14.0/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/packmol/ -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/build/packmol-20.14.0/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/packmol-20.14.0 -B/build/packmol-20.14.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/packmol-20.14.0/debian/packmol/usr/bin/packmol make[1]: Leaving directory '/build/packmol-20.14.0/obj-arm-linux-gnueabihf' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.14.0-1_armhf.deb'. dpkg-deb: building package 'packmol' in '../packmol_20.14.0-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../packmol_20.14.0-1_armhf.buildinfo dpkg-genchanges --build=binary -O../packmol_20.14.0-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/28792/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/28792/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/28792 and its subdirectories I: Current time: Fri Jun 9 09:39:05 +14 2023 I: pbuilder-time-stamp: 1686253145