I: pbuilder: network access will be disabled during build I: Current time: Thu Jul 11 10:15:56 +14 2024 I: pbuilder-time-stamp: 1720642556 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [packmol_20.14.0-1.dsc] I: copying [./packmol_20.14.0.orig.tar.gz] I: copying [./packmol_20.14.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Feb 4 01:42:57 2023 +14 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./packmol_20.14.0-1.dsc: no acceptable signature found dpkg-source: info: extracting packmol in packmol-20.14.0 dpkg-source: info: unpacking packmol_20.14.0.orig.tar.gz dpkg-source: info: unpacking packmol_20.14.0-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/44367/tmp/hooks/D01_modify_environment starting debug: Running on ionos16-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jul 11 10:16 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/44367/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/44367/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=66aa3460562543b0b898569c41b69559 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=44367 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.8QAiL71h/pbuilderrc_bamJ --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.8QAiL71h/b2 --logfile b2/build.log --extrapackages usrmerge packmol_20.14.0-1.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 24 2023 bash -rwxr-xr-x 3 root root 38404 Sep 19 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 19 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 21 2022 cat -rwxr-xr-x 1 root root 79816 Sep 21 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 21 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 21 2022 chown -rwxr-xr-x 1 root root 162024 Sep 21 2022 cp -rwxr-xr-x 1 root root 136916 Jan 6 2023 dash -rwxr-xr-x 1 root root 137160 Sep 21 2022 date -rwxr-xr-x 1 root root 100364 Sep 21 2022 dd -rwxr-xr-x 1 root root 108940 Sep 21 2022 df -rwxr-xr-x 1 root root 162152 Sep 21 2022 dir -rwxr-xr-x 1 root root 87760 Mar 24 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 20 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 20 2022 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 21 2022 echo -rwxr-xr-x 1 root root 41 Jan 25 2023 egrep -rwxr-xr-x 1 root root 34664 Sep 21 2022 false -rwxr-xr-x 1 root root 41 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 84272 Mar 24 2023 findmnt -rwsr-xr-x 1 root root 30240 Mar 23 2023 fusermount -rwxr-xr-x 1 root root 218680 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 20 2022 hostname -rwxr-xr-x 1 root root 75756 Sep 21 2022 ln -rwxr-xr-x 1 root root 55600 Mar 24 2023 login -rwxr-xr-x 1 root root 162152 Sep 21 2022 ls -rwxr-xr-x 1 root root 214568 Mar 24 2023 lsblk -rwxr-xr-x 1 root root 96328 Sep 21 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 21 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 21 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 24 2023 more -rwsr-xr-x 1 root root 58912 Mar 24 2023 mount -rwxr-xr-x 1 root root 13856 Mar 24 2023 mountpoint -rwxr-xr-x 1 root root 157932 Sep 21 2022 mv lrwxrwxrwx 1 root root 8 Dec 20 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 21 2022 pwd lrwxrwxrwx 1 root root 4 Apr 24 2023 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 21 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 21 2022 rm -rwxr-xr-x 1 root root 51080 Sep 21 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 3 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 6 2023 sed lrwxrwxrwx 1 root root 9 Jul 11 10:16 sh -> /bin/bash -rwxr-xr-x 1 root root 38760 Sep 21 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 21 2022 stty -rwsr-xr-x 1 root root 83492 Mar 24 2023 su -rwxr-xr-x 1 root root 38792 Sep 21 2022 sync -rwxr-xr-x 1 root root 598456 Apr 7 2023 tar -rwxr-xr-x 1 root root 13860 Nov 3 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 21 2022 touch -rwxr-xr-x 1 root root 34664 Sep 21 2022 true -rwxr-xr-x 1 root root 17892 Mar 23 2023 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 24 2023 umount -rwxr-xr-x 1 root root 38760 Sep 21 2022 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 21 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 24 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 20 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/44367/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, gfortran dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 45.8 MB of archives. After unpacking 170 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 libproc2-0 i386 2:4.0.2-3 [63.7 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 procps i386 2:4.0.2-3 [706 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libarchive13 i386 3.6.2-1 [385 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-10 [420 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libjsoncpp25 i386 1.9.5-4 [86.2 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 librhash0 i386 1.4.3-3 [149 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 libuv1 i386 1.44.2-1 [147 kB] Get: 34 http://deb.debian.org/debian bookworm/main i386 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 cmake i386 3.25.1-1 [9767 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 41 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 libgfortran-12-dev i386 12.2.0-14 [761 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 gfortran-12 i386 12.2.0-14 [10.5 MB] Get: 52 http://deb.debian.org/debian bookworm/main i386 gfortran i386 4:12.2.0-3 [1432 B] Fetched 45.8 MB in 1s (61.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_i386.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_i386.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../04-libmagic1_1%3a5.44-3_i386.deb ... Unpacking libmagic1:i386 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_i386.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_i386.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_i386.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_i386.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.7-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_i386.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_i386.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../17-libicu72_72.1-3_i386.deb ... Unpacking libicu72:i386 (72.1-3) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../18-libxml2_2.9.14+dfsg-1.2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.2) ... Selecting previously unselected package libarchive13:i386. Preparing to unpack .../19-libarchive13_3.6.2-1_i386.deb ... Unpacking libarchive13:i386 (3.6.2-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../20-libbrotli1_1.0.9-2+b6_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../21-libsasl2-modules-db_2.1.28+dfsg-10_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../22-libsasl2-2_2.1.28+dfsg-10_i386.deb ... Unpacking libsasl2-2:i386 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:i386. Preparing to unpack .../23-libldap-2.5-0_2.5.13+dfsg-5_i386.deb ... Unpacking libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../24-libnghttp2-14_1.52.0-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.52.0-1) ... Selecting previously unselected package libpsl5:i386. Preparing to unpack .../25-libpsl5_0.21.2-1_i386.deb ... Unpacking libpsl5:i386 (0.21.2-1) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../26-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:i386. 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Reading state information... usrmerge is already the newest version (35). fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/44367/tmp/hooks/A99_set_merged_usr starting Re-configuring usrmerge... removed '/etc/unsupported-skip-usrmerge-conversion' The system has been successfully converted. I: user script /srv/workspace/pbuilder/44367/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/packmol-20.14.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../packmol_20.14.0-1_source.changes dpkg-buildpackage: info: source package packmol dpkg-buildpackage: info: source version 1:20.14.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The Fortran compiler identification is GNU 12.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/f95 - skipped -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/packmol-20.14.0/obj-i686-linux-gnu dh_auto_build -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/packmol-20.14.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/packmol-20.14.0 -B/build/packmol-20.14.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/packmol-20.14.0/obj-i686-linux-gnu/CMakeFiles /build/packmol-20.14.0/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/packmol-20.14.0/obj-i686-linux-gnu' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/packmol-20.14.0/obj-i686-linux-gnu' cd /build/packmol-20.14.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/packmol-20.14.0 /build/packmol-20.14.0 /build/packmol-20.14.0/obj-i686-linux-gnu /build/packmol-20.14.0/obj-i686-linux-gnu /build/packmol-20.14.0/obj-i686-linux-gnu/CMakeFiles/packmol.dir/DependInfo.cmake --color= Dependee "/build/packmol-20.14.0/obj-i686-linux-gnu/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/build/packmol-20.14.0/obj-i686-linux-gnu/CMakeFiles/packmol.dir/depend.internal". 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-ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gwalls.f90 -o CMakeFiles/packmol.dir/src/gwalls.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gparc.f90 -o CMakeFiles/packmol.dir/src/gparc.f90.o [ 51%] Building Fortran object CMakeFiles/packmol.dir/src/comprest.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/resetboxes.f90 -o CMakeFiles/packmol.dir/src/resetboxes.f90.o [ 53%] Building Fortran object CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/comprest.f90 -o CMakeFiles/packmol.dir/src/comprest.f90.o [ 56%] Building Fortran object CMakeFiles/packmol.dir/src/polartocart.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/tobar.f90 -o CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/polartocart.f90 -o CMakeFiles/packmol.dir/src/polartocart.f90.o [ 58%] Building Fortran object CMakeFiles/packmol.dir/src/setijk.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setijk.f90 -o CMakeFiles/packmol.dir/src/setijk.f90.o [ 61%] Building Fortran object CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/restmol.f90 -o CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/usegencan.f90.o.provides.build [ 64%] Building Fortran object CMakeFiles/packmol.dir/src/cenmass.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/cenmass.f90 -o CMakeFiles/packmol.dir/src/cenmass.f90.o /build/packmol-20.14.0/src/gencan.f:2574:5: 2574 | 1003 format(6X,I6,T22,D17.6,T43,D17.6) | 1 Warning: Label 1003 at (1) defined but not used [-Wunused-label] [ 66%] Building Fortran object CMakeFiles/packmol.dir/src/pgencan.f90.o /build/packmol-20.14.0/src/gencan.f:5662:5: 5662 | 110 IF (DABS(DX(I)).LE.XMAX) GO TO 115 | 1 Warning: Label 110 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5661:5: 5661 | 70 IF (DABS(DX(I)).GT.CUTLO) GO TO 75 | 1 Warning: Label 70 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5654:5: 5654 | 50 IF (DX(I).EQ.ZERO) GO TO 200 | 1 Warning: Label 50 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5652:5: 5652 | 30 IF (DABS(DX(I)).GT.CUTLO) GO TO 85 | 1 Warning: Label 30 at (1) defined but not used [-Wunused-label] /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/pgencan.f90 -o CMakeFiles/packmol.dir/src/pgencan.f90.o [ 69%] Building Fortran object CMakeFiles/packmol.dir/src/initial.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/initial.f90 -o CMakeFiles/packmol.dir/src/initial.f90.o /build/packmol-20.14.0/src/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:40: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:33: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:12: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2584:71: 2584 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:3819:61: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:3819:54: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2981:19: 2981 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5179:19: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:52: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:56: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5179:12: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:71: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:64: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:525:37: 525 | double precision lastgpns(tmax) | 1 Warning: Array 'lastgpns' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] [ 71%] Building Fortran object CMakeFiles/packmol.dir/src/setsizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setsizes.f90 -o CMakeFiles/packmol.dir/src/setsizes.f90.o [ 74%] Building Fortran object CMakeFiles/packmol.dir/src/getinp.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/getinp.f90 -o CMakeFiles/packmol.dir/src/getinp.f90.o [ 76%] Building Fortran object CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/strlength.f90 -o CMakeFiles/packmol.dir/src/strlength.f90.o [ 79%] Building Fortran object CMakeFiles/packmol.dir/src/output.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/output.f90 -o CMakeFiles/packmol.dir/src/output.f90.o [ 82%] Building Fortran object CMakeFiles/packmol.dir/src/checkpoint.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/checkpoint.f90 -o CMakeFiles/packmol.dir/src/checkpoint.f90.o [ 84%] Building Fortran object CMakeFiles/packmol.dir/src/writesuccess.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/writesuccess.f90 -o CMakeFiles/packmol.dir/src/writesuccess.f90.o [ 87%] Building Fortran object CMakeFiles/packmol.dir/app/packmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/app/packmol.f90 -o CMakeFiles/packmol.dir/app/packmol.f90.o [ 89%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/swaptype.f90 -o CMakeFiles/packmol.dir/src/swaptype.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/heuristics.f90 -o CMakeFiles/packmol.dir/src/heuristics.f90.o [ 94%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/input.f90.o.provides.build [ 97%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/computeg.f90 -o CMakeFiles/packmol.dir/src/computeg.f90.o /build/packmol-20.14.0/src/getinp.f90:962:11: 962 | if(ires.ne.ireslast) then | ^ Warning: 'ireslast' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/getinp.f90:947:34: 947 | integer :: iread, ires, ireslast, nres, ioerr | ^ note: 'ireslast' was declared here /build/packmol-20.14.0/src/output.f90:571:32: 571 | nres = ilres - ifres + 1 | ^ Warning: 'ilres' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/output.f90:18:53: 18 | irest, iimol, ichain, iatom, irec, ilres, ifres,& | ^ note: 'ilres' was declared here /build/packmol-20.14.0/app/packmol.f90:331:50: 331 | iratom(icart,iratcount) = iirest | ^ Warning: 'iirest' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/app/packmol.f90:50:42: 50 | integer :: i, iline, iiatom, iat, iirest, iratcount, ival | ^ note: 'iirest' was declared here /build/packmol-20.14.0/src/gencan.f:3346:72: 3346 | beta = rnorm2 / rnorm2prev | ^ Warning: 'rnorm2prev' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3238:24: 3238 | + rnorm2prev,snorm2,snorm2prev | ^ note: 'rnorm2prev' was declared here /build/packmol-20.14.0/src/gencan.f:3650:14: 3650 | if ( rbdtype .eq. 1 ) then | ^ Warning: 'rbdposatype' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3234:68: 3234 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposatype' was declared here /build/packmol-20.14.0/src/gencan.f:3234:56: 3234 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ Warning: 'rbdposaind' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dtw' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3237:21: 3237 | + dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2, | ^ note: 'dtw' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dtr' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3236:71: 3236 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dtr' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dnorm2' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3236:67: 3236 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dnorm2' was declared here /build/packmol-20.14.0/src/gencan.f:3495:72: 3495 | amaxn = max( amax1n, amax2n ) | ^ Warning: 'amax1n' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:49: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1n' was declared here /build/packmol-20.14.0/src/gencan.f:3494:72: 3494 | amax = min( amax1 , amax2 ) | ^ Warning: 'amax1' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:42: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'alpha' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:31: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'alpha' was declared here /build/packmol-20.14.0/src/gencan.f:2074:72: 2074 | lamspg = sts / sty | ^ Warning: 'sty' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:1677:41: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sty' was declared here /build/packmol-20.14.0/src/gencan.f:2137:72: 2137 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: 'sts' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:1677:37: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sts' was declared here [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/f95 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol make[3]: Leaving directory '/build/packmol-20.14.0/obj-i686-linux-gnu' [100%] Built target packmol make[2]: Leaving directory '/build/packmol-20.14.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/packmol-20.14.0/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/packmol-20.14.0/obj-i686-linux-gnu' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/packmol/ -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j15 install DESTDIR=/build/packmol-20.14.0/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/packmol-20.14.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/packmol-20.14.0 -B/build/packmol-20.14.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/packmol-20.14.0/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/packmol-20.14.0/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/packmol-20.14.0/debian/packmol/usr/bin/packmol make[1]: Leaving directory '/build/packmol-20.14.0/obj-i686-linux-gnu' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'packmol' in '../packmol_20.14.0-1_i386.deb'. dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.14.0-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../packmol_20.14.0-1_i386.buildinfo dpkg-genchanges --build=binary -O../packmol_20.14.0-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/44367/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/44367/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/44367 and its subdirectories I: Current time: Thu Jul 11 10:16:22 +14 2024 I: pbuilder-time-stamp: 1720642582