I: pbuilder: network access will be disabled during build I: Current time: Thu Feb 8 18:35:10 +14 2024 I: pbuilder-time-stamp: 1707366910 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [circlator_1.5.6-5.dsc] I: copying [./circlator_1.5.6.orig.tar.gz] I: copying [./circlator_1.5.6-5.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.IQ5PVqW4/trustedkeys.kbx': General error gpgv: Signature made Sat Feb 20 22:45:02 2021 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./circlator_1.5.6-5.dsc dpkg-source: info: extracting circlator in circlator-1.5.6 dpkg-source: info: unpacking circlator_1.5.6.orig.tar.gz dpkg-source: info: unpacking circlator_1.5.6-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_canu_detection.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/808583/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' lrwxrwxrwx 1 root root 4 Feb 8 18:40 /bin/sh -> bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/808583/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/808583/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16' DIRSTACK=() DISTRIBUTION=bullseye EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=10711a69c6084987a4e45f1965b6441f LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=808583 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.H2ZMXJ5i/pbuilderrc_f0B0 --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.H2ZMXJ5i/b2 --logfile b2/build.log circlator_1.5.6-5.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 6.0.0-0.deb11.6-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.0.12-1~bpo11+1 (2022-12-19) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 28 2022 bash -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash -rwxr-xr-x 1 root root 113664 Sep 24 2020 date -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd -rwxr-xr-x 1 root root 93936 Sep 24 2020 df -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir -rwxr-xr-x 1 root root 84440 Jan 21 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 24 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 69032 Jan 21 2022 findmnt -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 98048 Apr 10 2022 gzip -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln -rwxr-xr-x 1 root root 56952 Feb 8 2020 login -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls -rwxr-xr-x 1 root root 149736 Jan 21 2022 lsblk -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp -rwxr-xr-x 1 root root 59632 Jan 21 2022 more -rwsr-xr-x 1 root root 55528 Jan 21 2022 mount -rwxr-xr-x 1 root root 18664 Jan 21 2022 mountpoint -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 17 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd lrwxrwxrwx 1 root root 4 Mar 28 2022 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Feb 8 18:40 sh -> bash lrwxrwxrwx 1 root root 4 Jan 24 05:47 sh.distrib -> dash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jan 21 2022 su -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch -rwxr-xr-x 1 root root 39680 Sep 24 2020 true -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jan 21 2022 umount -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir -rwxr-xr-x 1 root root 63744 Jan 21 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/808583/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-openpyxl, python3-jdcal, fastaq (>= 3.12.1), python3-pysam, python3-pymummer, python3-nose, spades, bwa (>= 0.7.12), prodigal, canu (<< 1.8+dfsg-1) | canu (>= 1.8+dfsg-2) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-openpyxl; however: Package python3-openpyxl is not installed. pbuilder-satisfydepends-dummy depends on python3-jdcal; however: Package python3-jdcal is not installed. pbuilder-satisfydepends-dummy depends on fastaq (>= 3.12.1); however: Package fastaq is not installed. pbuilder-satisfydepends-dummy depends on python3-pysam; however: Package python3-pysam is not installed. pbuilder-satisfydepends-dummy depends on python3-pymummer; however: Package python3-pymummer is not installed. pbuilder-satisfydepends-dummy depends on python3-nose; however: Package python3-nose is not installed. pbuilder-satisfydepends-dummy depends on spades; however: Package spades is not installed. pbuilder-satisfydepends-dummy depends on bwa (>= 0.7.12); however: Package bwa is not installed. pbuilder-satisfydepends-dummy depends on prodigal; however: Package prodigal is not installed. pbuilder-satisfydepends-dummy depends on canu (<< 1.8+dfsg-1) | canu (>= 1.8+dfsg-2); however: Package canu is not installed. Package canu is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} aglfn{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bamtools{a} binfmt-support{a} bsdextrautils{a} bwa{a} ca-certificates{a} ca-certificates-java{a} canu{a} dbus{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} default-jre-headless{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dmsetup{a} dwz{a} fastaq{a} fastjar{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gawk{a} gettext{a} gettext-base{a} glib-networking{a} glib-networking-common{a} glib-networking-services{a} gnuplot{a} gnuplot-data{a} gnuplot-qt{a} groff-base{a} gsettings-desktop-schemas{a} gtk-update-icon-cache{a} hicolor-icon-theme{a} intltool-debian{a} jaligner{a} jarwrapper{a} java-common{a} libapache-pom-java{a} libapparmor1{a} libarchive-zip-perl{a} libargon2-1{a} libasound2{a} libasound2-data{a} libatinject-jsr330-api-java{a} libatk-bridge2.0-0{a} libatk1.0-0{a} libatk1.0-data{a} libatspi2.0-0{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbamtools2.5.1{a} libbrotli1{a} libbsd0{a} libcairo-gobject2{a} libcairo2{a} libcap2{a} libcolord2{a} libcommons-compress-java{a} libcommons-parent-java{a} libcryptsetup12{a} libcups2{a} libcurl3-gnutls{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdeflate0{a} libdevmapper1.02.1{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libelf1{a} libepoxy0{a} libevdev2{a} libexpat1{a} libfastutil-java{a} libfile-stripnondeterminism-perl{a} libfilesys-df-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgd3{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf-xlib-2.0-0{a} libgdk-pixbuf2.0-0{a} libgdk-pixbuf2.0-common{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgtk-3-0{a} libgtk-3-common{a} libguava-java{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhat-trie0{a} libhts3{a} libice6{a} libicu67{a} libinput-bin{a} libinput10{a} libip4tc2{a} libjbig0{a} libjpeg62-turbo{a} libjson-c5{a} libjson-glib-1.0-0{a} libjson-glib-1.0-common{a} libjsoncpp24{a} libjsr305-java{a} libkmod2{a} liblcms2-2{a} libldap-2.4-2{a} libllvm11{a} liblua5.4-0{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmd4c0{a} libmpdec3{a} libmtdev1{a} libncurses6{a} libnghttp2-14{a} libnlopt0{a} libnotify4{a} libnspr4{a} libnss3{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpciaccess0{a} libpcre2-16-0{a} libpcsclite1{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libprocps8{a} libproxy1v5{a} libpsl5{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5network5{a} libqt5printsupport5{a} libqt5svg5{a} libqt5widgets5{a} libreadline8{a} librest-0.7-0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsigsegv2{a} libsm6{a} libsoup-gnome2.4-1{a} libsoup2.4-1{a} libssh2-1{a} libssw-java{a} libssw0{a} libsub-override-perl{a} libthai-data{a} libthai0{a} libtiff5{a} libtool{a} libuchardet0{a} libvulkan1{a} libwacom-common{a} libwacom2{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp6{a} libwxbase3.0-0v5{a} libwxgtk3.0-gtk3-0v5{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxi6{a} libxinerama1{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxpm4{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxxf86vm1{a} libyaml-0-2{a} libz3-4{a} m4{a} man-db{a} media-types{a} mhap{a} mummer{a} openjdk-11-jre-headless{a} openssl{a} po-debconf{a} procps{a} prodigal{a} python3{a} python3-all{a} python3-distutils{a} python3-et-xmlfile{a} python3-jdcal{a} python3-joblib{a} python3-lib2to3{a} python3-lxml{a} python3-minimal{a} python3-nose{a} python3-openpyxl{a} python3-pkg-resources{a} python3-pymummer{a} python3-pysam{a} python3-setuptools{a} python3-yaml{a} python3.9{a} python3.9-minimal{a} readline-common{a} samtools{a} sensible-utils{a} shared-mime-info{a} spades{a} systemd{a} systemd-sysv{a} ucf{a} x11-common{a} xkb-data{a} The following packages are RECOMMENDED but will NOT be installed: alsa-topology-conf alsa-ucm-conf at-spi2-core awesome chrony cinnamon curl dunst gnome-flashback gnome-shell libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data libgpm2 libgtk-3-bin libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd librsvg2-common libsasl2-modules libwacom-bin lxqt-notificationd lynx mate-notification-daemon mesa-vulkan-drivers notification-daemon notify-osd ntp ntpsec openntpd phosh plasma-workspace psmisc publicsuffix python3-bs4 python3-html5lib python3-jarabe python3-numpy python3-pil python3-psutil python3-pytest python3-simplejson qt5-gtk-platformtheme qttranslations5-l10n systemd-timesyncd wget xdg-user-dirs xfce4-notifyd 0 packages upgraded, 282 newly installed, 0 to remove and 0 not upgraded. Need to get 193 MB of archives. After unpacking 716 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 libapparmor1 amd64 2.13.6-10 [99.3 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libcap2 amd64 1:2.44-1 [23.6 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 libargon2-1 amd64 0~20171227-0.2 [19.6 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 dmsetup amd64 2:1.02.175-2.1 [92.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 libdevmapper1.02.1 amd64 2:1.02.175-2.1 [143 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 libjson-c5 amd64 0.15-2 [42.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libcryptsetup12 amd64 2:2.3.7-1+deb11u1 [248 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libip4tc2 amd64 1.8.7-1 [34.6 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 libkmod2 amd64 28-1 [55.6 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 systemd amd64 247.3-7+deb11u1 [4501 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 systemd-sysv amd64 247.3-7+deb11u1 [113 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 libdbus-1-3 amd64 1.12.24-0+deb11u1 [222 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 dbus amd64 1.12.24-0+deb11u1 [243 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8+deb11u1 [145 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 gawk amd64 1:5.1.0-1 [605 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.8-1 [1370 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u3 [693 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 shared-mime-info amd64 2.0-1 [701 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 libdouble-conversion3 amd64 3.1.5-6.1 [41.0 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 libpcre2-16-0 amd64 10.36-2+deb11u1 [232 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 libqt5core5a amd64 5.15.2+dfsg-9 [1822 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1+deb11u1 [418 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 ucf all 3.0043 [74.0 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 fontconfig amd64 2.13.1-4.2 [417 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 libdrm-common all 2.4.104-1 [14.9 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 libdrm2 amd64 2.4.104-1 [41.5 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 libglvnd0 amd64 1.3.2-1 [53.6 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 libwayland-server0 amd64 1.18.0-2~exp1.1 [34.4 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 libgbm1 amd64 20.3.5-1 [73.5 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 libglapi-mesa amd64 20.3.5-1 [71.7 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 libwayland-client0 amd64 1.18.0-2~exp1.1 [26.9 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.7.2-1 [311 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.7.2-1 [772 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 libx11-xcb1 amd64 2:1.7.2-1 [203 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 libxcb-dri2-0 amd64 1.14-3 [103 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 libxcb-dri3-0 amd64 1.14-3 [102 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 libxcb-present0 amd64 1.14-3 [101 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 libxcb-sync1 amd64 1.14-3 [105 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 libxcb-xfixes0 amd64 1.14-3 [105 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get: 61 http://deb.debian.org/debian bullseye/main amd64 libegl-mesa0 amd64 20.3.5-1 [141 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 libegl1 amd64 1.3.2-1 [34.8 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libxcb-glx0 amd64 1.14-3 [118 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 libxdamage1 amd64 1:1.1.5-2 [15.7 kB] Get: 66 http://deb.debian.org/debian bullseye/main amd64 libxext6 amd64 2:1.3.3-1.1 [52.7 kB] Get: 67 http://deb.debian.org/debian bullseye/main amd64 libxfixes3 amd64 1:5.0.3-2 [22.1 kB] Get: 68 http://deb.debian.org/debian bullseye/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get: 69 http://deb.debian.org/debian bullseye/main amd64 libdrm-amdgpu1 amd64 2.4.104-1 [28.5 kB] Get: 70 http://deb.debian.org/debian bullseye/main amd64 libpciaccess0 amd64 0.16-1 [53.6 kB] Get: 71 http://deb.debian.org/debian bullseye/main amd64 libdrm-intel1 amd64 2.4.104-1 [71.8 kB] Get: 72 http://deb.debian.org/debian bullseye/main amd64 libdrm-nouveau2 amd64 2.4.104-1 [26.8 kB] Get: 73 http://deb.debian.org/debian bullseye/main amd64 libdrm-radeon1 amd64 2.4.104-1 [30.2 kB] Get: 74 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 75 http://deb.debian.org/debian bullseye/main amd64 libedit2 amd64 3.1-20191231-2+b1 [96.7 kB] Get: 76 http://deb.debian.org/debian bullseye/main amd64 libz3-4 amd64 4.8.10-1 [6949 kB] Get: 77 http://deb.debian.org/debian bullseye/main amd64 libllvm11 amd64 1:11.0.1-2 [17.9 MB] Get: 78 http://deb.debian.org/debian bullseye/main amd64 libsensors-config all 1:3.6.0-7 [32.3 kB] Get: 79 http://deb.debian.org/debian bullseye/main amd64 libsensors5 amd64 1:3.6.0-7 [52.3 kB] Get: 80 http://deb.debian.org/debian bullseye/main amd64 libvulkan1 amd64 1.2.162.0-1 [103 kB] Get: 81 http://deb.debian.org/debian bullseye/main amd64 libgl1-mesa-dri amd64 20.3.5-1 [9633 kB] Get: 82 http://deb.debian.org/debian bullseye/main amd64 libglx-mesa0 amd64 20.3.5-1 [186 kB] Get: 83 http://deb.debian.org/debian bullseye/main amd64 libglx0 amd64 1.3.2-1 [35.7 kB] Get: 84 http://deb.debian.org/debian bullseye/main amd64 libgl1 amd64 1.3.2-1 [89.5 kB] Get: 85 http://deb.debian.org/debian bullseye/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 86 http://deb.debian.org/debian bullseye/main amd64 libharfbuzz0b amd64 2.7.4-1 [1471 kB] Get: 87 http://deb.debian.org/debian bullseye/main amd64 x11-common all 1:7.7+22 [252 kB] Get: 88 http://deb.debian.org/debian bullseye/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get: 89 http://deb.debian.org/debian bullseye/main amd64 libevdev2 amd64 1.11.0+dfsg-1 [34.0 kB] Get: 90 http://deb.debian.org/debian bullseye/main amd64 libmtdev1 amd64 1.1.6-1 [23.0 kB] Get: 91 http://deb.debian.org/debian bullseye/main amd64 libgudev-1.0-0 amd64 234-1 [14.7 kB] Get: 92 http://deb.debian.org/debian bullseye/main amd64 libwacom-common all 1.8-2 [49.7 kB] Get: 93 http://deb.debian.org/debian bullseye/main amd64 libwacom2 amd64 1.8-2 [21.9 kB] Get: 94 http://deb.debian.org/debian bullseye/main amd64 libinput-bin amd64 1.16.4-3 [23.0 kB] Get: 95 http://deb.debian.org/debian bullseye/main amd64 libinput10 amd64 1.16.4-3 [118 kB] Get: 96 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get: 97 http://deb.debian.org/debian bullseye/main amd64 libmd4c0 amd64 0.4.7-2 [43.6 kB] Get: 98 http://deb.debian.org/debian bullseye/main amd64 libqt5dbus5 amd64 5.15.2+dfsg-9 [228 kB] Get: 99 http://deb.debian.org/debian bullseye/main amd64 libqt5network5 amd64 5.15.2+dfsg-9 [658 kB] Get: 100 http://deb.debian.org/debian bullseye/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 101 http://deb.debian.org/debian bullseye/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [27.4 kB] Get: 102 http://deb.debian.org/debian bullseye/main amd64 libxcb-util1 amd64 0.4.0-1+b1 [23.2 kB] Get: 103 http://deb.debian.org/debian bullseye/main amd64 libxcb-image0 amd64 0.4.0-1+b3 [24.3 kB] Get: 104 http://deb.debian.org/debian bullseye/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get: 105 http://deb.debian.org/debian bullseye/main amd64 libxcb-randr0 amd64 1.14-3 [113 kB] Get: 106 http://deb.debian.org/debian bullseye/main amd64 libxcb-render0 amd64 1.14-3 [111 kB] Get: 107 http://deb.debian.org/debian bullseye/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get: 108 http://deb.debian.org/debian bullseye/main amd64 libxcb-shape0 amd64 1.14-3 [102 kB] Get: 109 http://deb.debian.org/debian bullseye/main amd64 libxcb-xinerama0 amd64 1.14-3 [101 kB] Get: 110 http://deb.debian.org/debian bullseye/main amd64 libxcb-xinput0 amd64 1.14-3 [126 kB] Get: 111 http://deb.debian.org/debian bullseye/main amd64 libxcb-xkb1 amd64 1.14-3 [126 kB] Get: 112 http://deb.debian.org/debian bullseye/main amd64 xkb-data all 2.29-2 [655 kB] Get: 113 http://deb.debian.org/debian bullseye/main amd64 libxkbcommon0 amd64 1.0.3-2 [101 kB] Get: 114 http://deb.debian.org/debian bullseye/main amd64 libxkbcommon-x11-0 amd64 1.0.3-2 [16.6 kB] Get: 115 http://deb.debian.org/debian bullseye/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get: 116 http://deb.debian.org/debian bullseye/main amd64 libqt5gui5 amd64 5.15.2+dfsg-9 [3320 kB] Get: 117 http://deb.debian.org/debian bullseye/main amd64 libqt5widgets5 amd64 5.15.2+dfsg-9 [2349 kB] Get: 118 http://deb.debian.org/debian bullseye/main amd64 libqt5svg5 amd64 5.15.2-3 [132 kB] Get: 119 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get: 120 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get: 121 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get: 122 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get: 123 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get: 124 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get: 125 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get: 126 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get: 127 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get: 128 http://deb.debian.org/debian bullseye/main amd64 libncurses6 amd64 6.2+20201114-2 [102 kB] Get: 129 http://deb.debian.org/debian bullseye/main amd64 libprocps8 amd64 2:3.3.17-5 [63.9 kB] Get: 130 http://deb.debian.org/debian bullseye/main amd64 procps amd64 2:3.3.17-5 [502 kB] Get: 131 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1n-0+deb11u3 [853 kB] Get: 132 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20210119 [158 kB] Get: 133 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 134 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 135 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 136 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 137 http://deb.debian.org/debian bullseye/main amd64 libpam-systemd amd64 247.3-7+deb11u1 [283 kB] Get: 138 http://deb.debian.org/debian bullseye/main amd64 hicolor-icon-theme all 0.17-2 [11.4 kB] Get: 139 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf2.0-common all 2.42.2+dfsg-1+deb11u1 [320 kB] Get: 140 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get: 141 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 142 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1 [258 kB] Get: 143 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u1 [289 kB] Get: 144 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.2+dfsg-1+deb11u1 [147 kB] Get: 145 http://deb.debian.org/debian bullseye/main amd64 gtk-update-icon-cache amd64 3.24.24-4+deb11u2 [88.2 kB] Get: 146 http://deb.debian.org/debian bullseye/main amd64 adwaita-icon-theme all 3.38.0-1 [10.9 MB] Get: 147 http://deb.debian.org/debian bullseye/main amd64 aglfn all 1.7+git20191031.4036a9c-2 [30.5 kB] Get: 148 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 149 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 150 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 151 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 152 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 153 http://deb.debian.org/debian bullseye/main amd64 libbamtools2.5.1 amd64 2.5.1+dfsg-9 [158 kB] Get: 154 http://deb.debian.org/debian bullseye/main amd64 libjsoncpp24 amd64 1.9.4-4 [78.9 kB] Get: 155 http://deb.debian.org/debian bullseye/main amd64 bamtools amd64 2.5.1+dfsg-9 [183 kB] Get: 156 http://deb.debian.org/debian bullseye/main amd64 binfmt-support amd64 2.2.1-1+deb11u1 [66.8 kB] Get: 157 http://deb.debian.org/debian bullseye/main amd64 bwa amd64 0.7.17-6+b1 [212 kB] Get: 158 http://deb.debian.org/debian bullseye/main amd64 java-common all 0.72 [14.5 kB] Get: 159 http://deb.debian.org/debian bullseye/main amd64 libavahi-common-data amd64 0.8-5+deb11u1 [124 kB] Get: 160 http://deb.debian.org/debian bullseye/main amd64 libavahi-common3 amd64 0.8-5+deb11u1 [58.7 kB] Get: 161 http://deb.debian.org/debian bullseye/main amd64 libavahi-client3 amd64 0.8-5+deb11u1 [62.4 kB] Get: 162 http://deb.debian.org/debian bullseye/main amd64 libcups2 amd64 2.3.3op2-3+deb11u2 [350 kB] Get: 163 http://deb.debian.org/debian bullseye/main amd64 liblcms2-2 amd64 2.12~rc1-2 [150 kB] Get: 164 http://deb.debian.org/debian bullseye/main amd64 libnspr4 amd64 2:4.29-1 [112 kB] Get: 165 http://deb.debian.org/debian bullseye/main amd64 libnss3 amd64 2:3.61-1+deb11u2 [1306 kB] Get: 166 http://deb.debian.org/debian bullseye/main amd64 libasound2-data all 1.2.4-1.1 [38.2 kB] Get: 167 http://deb.debian.org/debian bullseye/main amd64 libasound2 amd64 1.2.4-1.1 [356 kB] Get: 168 http://deb.debian.org/debian bullseye/main amd64 libpcsclite1 amd64 1.9.1-1 [60.2 kB] Get: 169 http://deb.debian.org/debian bullseye/main amd64 openjdk-11-jre-headless amd64 11.0.16+8-1~deb11u1 [37.3 MB] Get: 170 http://deb.debian.org/debian bullseye/main amd64 default-jre-headless amd64 2:1.11-72 [10.9 kB] Get: 171 http://deb.debian.org/debian bullseye/main amd64 ca-certificates-java all 20190909 [15.7 kB] Get: 172 http://deb.debian.org/debian bullseye/main amd64 libfilesys-df-perl amd64 0.92-6+b6 [12.6 kB] Get: 173 http://deb.debian.org/debian bullseye/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get: 174 http://deb.debian.org/debian bullseye/main amd64 jarwrapper all 0.78 [21.8 kB] Get: 175 http://deb.debian.org/debian bullseye/main amd64 libapache-pom-java all 18-1 [4676 B] Get: 176 http://deb.debian.org/debian bullseye/main amd64 libcommons-parent-java all 43-1 [10.8 kB] Get: 177 http://deb.debian.org/debian bullseye/main amd64 libcommons-compress-java all 1.20-1 [574 kB] Get: 178 http://deb.debian.org/debian bullseye/main amd64 libfastutil-java all 8.4.4-1 [16.2 MB] Get: 179 http://deb.debian.org/debian bullseye/main amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B] Get: 180 http://deb.debian.org/debian bullseye/main amd64 libjsr305-java all 0.1~+svn49-11 [26.9 kB] Get: 181 http://deb.debian.org/debian bullseye/main amd64 libguava-java all 29.0-6 [2419 kB] Get: 182 http://deb.debian.org/debian bullseye/main amd64 jaligner all 1.0+dfsg-7 [136 kB] Get: 183 http://deb.debian.org/debian bullseye/main amd64 libssw-java amd64 1.1-13 [16.7 kB] Get: 184 http://deb.debian.org/debian bullseye/main amd64 mhap all 2.1.3+dfsg-3 [160 kB] Get: 185 http://deb.debian.org/debian bullseye/main amd64 gnuplot-data all 5.4.1+dfsg1-1+deb11u1 [87.5 kB] Get: 186 http://deb.debian.org/debian bullseye/main amd64 libpixman-1-0 amd64 0.40.0-1.1~deb11u1 [543 kB] Get: 187 http://deb.debian.org/debian bullseye/main amd64 libcairo2 amd64 1.16.0-5 [694 kB] Get: 188 http://deb.debian.org/debian bullseye/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get: 189 http://deb.debian.org/debian bullseye/main amd64 libgd3 amd64 2.3.0-2 [137 kB] Get: 190 http://deb.debian.org/debian bullseye/main amd64 liblua5.4-0 amd64 5.4.2-2 [136 kB] Get: 191 http://deb.debian.org/debian bullseye/main amd64 libfribidi0 amd64 1.0.8-2+deb11u1 [64.9 kB] Get: 192 http://deb.debian.org/debian bullseye/main amd64 libthai-data all 0.1.28-3 [170 kB] Get: 193 http://deb.debian.org/debian bullseye/main amd64 libdatrie1 amd64 0.2.13-1 [42.7 kB] Get: 194 http://deb.debian.org/debian bullseye/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get: 195 http://deb.debian.org/debian bullseye/main amd64 libpango-1.0-0 amd64 1.46.2-3 [191 kB] Get: 196 http://deb.debian.org/debian bullseye/main amd64 libpangoft2-1.0-0 amd64 1.46.2-3 [62.2 kB] Get: 197 http://deb.debian.org/debian bullseye/main amd64 libpangocairo-1.0-0 amd64 1.46.2-3 [50.6 kB] Get: 198 http://deb.debian.org/debian bullseye/main amd64 libqt5printsupport5 amd64 5.15.2+dfsg-9 [222 kB] Get: 199 http://deb.debian.org/debian bullseye/main amd64 libwxbase3.0-0v5 amd64 3.0.5.1+dfsg-2 [1090 kB] Get: 200 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf-xlib-2.0-0 amd64 2.40.2-2 [47.9 kB] Get: 201 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf2.0-0 amd64 2.40.2-2 [14.1 kB] Get: 202 http://deb.debian.org/debian bullseye/main amd64 libatk1.0-data all 2.36.0-2 [149 kB] Get: 203 http://deb.debian.org/debian bullseye/main amd64 libatk1.0-0 amd64 2.36.0-2 [52.2 kB] Get: 204 http://deb.debian.org/debian bullseye/main amd64 libatspi2.0-0 amd64 2.38.0-4 [72.4 kB] Get: 205 http://deb.debian.org/debian bullseye/main amd64 libatk-bridge2.0-0 amd64 2.38.0-1 [64.6 kB] Get: 206 http://deb.debian.org/debian bullseye/main amd64 libcairo-gobject2 amd64 1.16.0-5 [125 kB] Get: 207 http://deb.debian.org/debian bullseye/main amd64 libcolord2 amd64 1.4.5-3 [144 kB] Get: 208 http://deb.debian.org/debian bullseye/main amd64 libepoxy0 amd64 1.5.5-1 [193 kB] Get: 209 http://deb.debian.org/debian bullseye/main amd64 libjson-glib-1.0-common all 1.6.2-1 [56.9 kB] Get: 210 http://deb.debian.org/debian bullseye/main amd64 libjson-glib-1.0-0 amd64 1.6.2-1 [65.4 kB] Get: 211 http://deb.debian.org/debian bullseye/main amd64 libproxy1v5 amd64 0.4.17-1 [59.5 kB] Get: 212 http://deb.debian.org/debian bullseye/main amd64 glib-networking-common all 2.66.0-2 [68.1 kB] Get: 213 http://deb.debian.org/debian bullseye/main amd64 glib-networking-services amd64 2.66.0-2 [17.5 kB] Get: 214 http://deb.debian.org/debian bullseye/main amd64 dbus-user-session amd64 1.12.24-0+deb11u1 [99.7 kB] Get: 215 http://deb.debian.org/debian bullseye/main amd64 libdconf1 amd64 0.38.0-2 [43.5 kB] Get: 216 http://deb.debian.org/debian bullseye/main amd64 dconf-service amd64 0.38.0-2 [37.4 kB] Get: 217 http://deb.debian.org/debian bullseye/main amd64 dconf-gsettings-backend amd64 0.38.0-2 [30.6 kB] Get: 218 http://deb.debian.org/debian bullseye/main amd64 gsettings-desktop-schemas all 3.38.0-2 [588 kB] Get: 219 http://deb.debian.org/debian bullseye/main amd64 glib-networking amd64 2.66.0-2 [67.6 kB] Get: 220 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get: 221 http://deb.debian.org/debian bullseye/main amd64 libsoup2.4-1 amd64 2.72.0-2 [280 kB] Get: 222 http://deb.debian.org/debian bullseye/main amd64 libsoup-gnome2.4-1 amd64 2.72.0-2 [22.2 kB] Get: 223 http://deb.debian.org/debian bullseye/main amd64 librest-0.7-0 amd64 0.8.1-1.1 [33.8 kB] Get: 224 http://deb.debian.org/debian bullseye/main amd64 libwayland-cursor0 amd64 1.18.0-2~exp1.1 [14.6 kB] Get: 225 http://deb.debian.org/debian bullseye/main amd64 libwayland-egl1 amd64 1.18.0-2~exp1.1 [8448 B] Get: 226 http://deb.debian.org/debian bullseye/main amd64 libxcomposite1 amd64 1:0.4.5-1 [16.6 kB] Get: 227 http://deb.debian.org/debian bullseye/main amd64 libxcursor1 amd64 1:1.2.0-2 [37.3 kB] Get: 228 http://deb.debian.org/debian bullseye/main amd64 libxi6 amd64 2:1.7.10-1 [83.4 kB] Get: 229 http://deb.debian.org/debian bullseye/main amd64 libxinerama1 amd64 2:1.1.4-2 [17.7 kB] Get: 230 http://deb.debian.org/debian bullseye/main amd64 libxrandr2 amd64 2:1.5.1-1 [37.5 kB] Get: 231 http://deb.debian.org/debian bullseye/main amd64 libgtk-3-common all 3.24.24-4+deb11u2 [3759 kB] Get: 232 http://deb.debian.org/debian bullseye/main amd64 libgtk-3-0 amd64 3.24.24-4+deb11u2 [2716 kB] Get: 233 http://deb.debian.org/debian bullseye/main amd64 libnotify4 amd64 0.7.9-3 [23.7 kB] Get: 234 http://deb.debian.org/debian bullseye/main amd64 libwxgtk3.0-gtk3-0v5 amd64 3.0.5.1+dfsg-2 [4494 kB] Get: 235 http://deb.debian.org/debian bullseye/main amd64 gnuplot-qt amd64 5.4.1+dfsg1-1+deb11u1 [1077 kB] Get: 236 http://deb.debian.org/debian bullseye/main amd64 gnuplot all 5.4.1+dfsg1-1+deb11u1 [21.2 kB] Get: 237 http://deb.debian.org/debian bullseye/main amd64 canu amd64 2.0+dfsg-1 [1256 kB] Get: 238 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 239 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 240 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 241 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 242 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 243 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 244 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 245 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 246 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 247 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 248 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 249 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 250 http://deb.debian.org/debian bullseye/main amd64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 251 http://deb.debian.org/debian bullseye/main amd64 python3-distutils all 3.9.2-1 [143 kB] Get: 252 http://deb.debian.org/debian bullseye/main amd64 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 253 http://deb.debian.org/debian bullseye/main amd64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 254 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1+deb11u1 [69.1 kB] Get: 255 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1+deb11u1 [106 kB] Get: 256 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3+deb11u1 [232 kB] Get: 257 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get: 258 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 259 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.9.0-2 [156 kB] Get: 260 http://deb.debian.org/debian bullseye/main amd64 libcurl3-gnutls amd64 7.74.0-1.3+deb11u3 [342 kB] Get: 261 http://deb.debian.org/debian bullseye/main amd64 libhts3 amd64 1.11-4 [378 kB] Get: 262 http://deb.debian.org/debian bullseye/main amd64 samtools amd64 1.11-1 [545 kB] Get: 263 http://deb.debian.org/debian bullseye/main amd64 fastaq all 3.17.0-3 [47.8 kB] Get: 264 http://deb.debian.org/debian bullseye/main amd64 libhat-trie0 amd64 0.1.2-2 [11.8 kB] Get: 265 http://deb.debian.org/debian bullseye/main amd64 libnlopt0 amd64 2.7.0-4+b2 [172 kB] Get: 266 http://deb.debian.org/debian bullseye/main amd64 libssw0 amd64 1.1-13 [19.7 kB] Get: 267 http://deb.debian.org/debian bullseye/main amd64 libxslt1.1 amd64 1.1.34-4+deb11u1 [240 kB] Get: 268 http://deb.debian.org/debian bullseye/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get: 269 http://deb.debian.org/debian bullseye/main amd64 mummer amd64 3.23+dfsg-7 [664 kB] Get: 270 http://deb.debian.org/debian bullseye/main amd64 prodigal amd64 1:2.6.3-4 [695 kB] Get: 271 http://deb.debian.org/debian bullseye/main amd64 python3-all amd64 3.9.2-3 [1056 B] Get: 272 http://deb.debian.org/debian bullseye/main amd64 python3-et-xmlfile all 1.0.1-2.1 [9180 B] Get: 273 http://deb.debian.org/debian bullseye/main amd64 python3-jdcal all 1.0-1.3 [7904 B] Get: 274 http://deb.debian.org/debian bullseye/main amd64 python3-joblib all 0.17.0-4 [213 kB] Get: 275 http://deb.debian.org/debian bullseye/main amd64 python3-lxml amd64 4.6.3+dfsg-0.1+deb11u1 [1093 kB] Get: 276 http://deb.debian.org/debian bullseye/main amd64 python3-nose all 1.3.7-7 [133 kB] Get: 277 http://deb.debian.org/debian bullseye/main amd64 python3-openpyxl all 3.0.3-1 [159 kB] Get: 278 http://deb.debian.org/debian bullseye/main amd64 python3-pymummer all 0.11.0-2 [11.3 kB] Get: 279 http://deb.debian.org/debian bullseye/main amd64 python3-pysam amd64 0.15.4+ds-3+b2 [1536 kB] Get: 280 http://deb.debian.org/debian bullseye/main amd64 python3-setuptools all 52.0.0-4 [366 kB] Get: 281 http://deb.debian.org/debian bullseye/main amd64 python3-yaml amd64 5.3.1-5 [138 kB] Get: 282 http://deb.debian.org/debian bullseye/main amd64 spades amd64 3.13.1+dfsg-2+b2 [4777 kB] Fetched 193 MB in 47s (4098 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../0-libapparmor1_2.13.6-10_amd64.deb ... Unpacking libapparmor1:amd64 (2.13.6-10) ... Selecting previously unselected package libcap2:amd64. Preparing to unpack .../1-libcap2_1%3a2.44-1_amd64.deb ... Unpacking libcap2:amd64 (1:2.44-1) ... Selecting previously unselected package libargon2-1:amd64. Preparing to unpack .../2-libargon2-1_0~20171227-0.2_amd64.deb ... Unpacking libargon2-1:amd64 (0~20171227-0.2) ... Selecting previously unselected package dmsetup. Preparing to unpack .../3-dmsetup_2%3a1.02.175-2.1_amd64.deb ... Unpacking dmsetup (2:1.02.175-2.1) ... Selecting previously unselected package libdevmapper1.02.1:amd64. Preparing to unpack .../4-libdevmapper1.02.1_2%3a1.02.175-2.1_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.175-2.1) ... Selecting previously unselected package libjson-c5:amd64. Preparing to unpack .../5-libjson-c5_0.15-2_amd64.deb ... Unpacking libjson-c5:amd64 (0.15-2) ... Selecting previously unselected package libcryptsetup12:amd64. Preparing to unpack .../6-libcryptsetup12_2%3a2.3.7-1+deb11u1_amd64.deb ... Unpacking libcryptsetup12:amd64 (2:2.3.7-1+deb11u1) ... Selecting previously unselected package libip4tc2:amd64. Preparing to unpack .../7-libip4tc2_1.8.7-1_amd64.deb ... Unpacking libip4tc2:amd64 (1.8.7-1) ... Selecting previously unselected package libkmod2:amd64. Preparing to unpack .../8-libkmod2_28-1_amd64.deb ... Unpacking libkmod2:amd64 (28-1) ... Selecting previously unselected package systemd. Preparing to unpack .../9-systemd_247.3-7+deb11u1_amd64.deb ... Unpacking systemd (247.3-7+deb11u1) ... Setting up libapparmor1:amd64 (2.13.6-10) ... Setting up libcap2:amd64 (1:2.44-1) ... Setting up libargon2-1:amd64 (0~20171227-0.2) ... Setting up libjson-c5:amd64 (0.15-2) ... Setting up libip4tc2:amd64 (1.8.7-1) ... Setting up libkmod2:amd64 (28-1) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.175-2.1) ... Setting up libcryptsetup12:amd64 (2:2.3.7-1+deb11u1) ... Setting up systemd (247.3-7+deb11u1) ... Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service -> /lib/systemd/system/getty@.service. Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target -> /lib/systemd/system/remote-fs.target. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service -> /lib/systemd/system/systemd-pstore.service. Initializing machine ID from random generator. Setting up dmsetup (2:1.02.175-2.1) ... Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20559 files and directories currently installed.) Preparing to unpack .../00-systemd-sysv_247.3-7+deb11u1_amd64.deb ... Unpacking systemd-sysv (247.3-7+deb11u1) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../01-libdbus-1-3_1.12.24-0+deb11u1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.12.24-0+deb11u1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../02-libexpat1_2.2.10-2+deb11u5_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2+deb11u5) ... Selecting previously unselected package dbus. Preparing to unpack .../03-dbus_1.12.24-0+deb11u1_amd64.deb ... Unpacking dbus (1.12.24-0+deb11u1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../04-bsdextrautils_2.36.1-8+deb11u1_amd64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../07-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../08-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../09-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../10-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../11-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Setting up readline-common (8.1-1) ... Setting up libreadline8:amd64 (8.1-1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package gawk. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21242 files and directories currently installed.) Preparing to unpack .../00-gawk_1%3a5.1.0-1_amd64.deb ... Unpacking gawk (1:5.1.0-1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../01-libglib2.0-0_2.66.8-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.66.8-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../02-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... 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Setting up libwayland-server0:amd64 (1.18.0-2~exp1.1) ... Setting up libpciaccess0:amd64 (0.16-1) ... Setting up systemd-sysv (247.3-7+deb11u1) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libdouble-conversion3:amd64 (3.1.5-6.1) ... Setting up libproxy1v5:amd64 (0.4.17-1) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up libjsr305-java (0.1~+svn49-11) ... Setting up bsdextrautils (2.36.1-8+deb11u1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hicolor-icon-theme (0.17-2) ... Setting up java-common (0.72) ... Setting up libicu67:amd64 (67.1-7) ... Setting up libdatrie1:amd64 (0.2.13-1) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up gawk (1:5.1.0-1) ... Setting up prodigal (1:2.6.3-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libglib2.0-0:amd64 (2.66.8-1) ... Setting up bwa (0.7.17-6+b1) ... Setting up libglvnd0:amd64 (1.3.2-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:amd64 (1.0.9-2+b2) ... Setting up libfilesys-df-perl (0.92-6+b6) ... Setting up libgdk-pixbuf2.0-common (2.42.2+dfsg-1+deb11u1) ... Setting up x11-common (1:7.7+22) ... Running in chroot, ignoring request. Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-7) ... Setting up libnghttp2-14:amd64 (1.43.0-1) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up libdeflate0:amd64 (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up m4 (1.4.18-5) ... Setting up xkb-data (2.29-2) ... Setting up libnlopt0:amd64 (2.7.0-4+b2) ... Setting up file (1:5.39-3) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libpcre2-16-0:amd64 (10.36-2+deb11u1) ... Setting up libcolord2:amd64 (1.4.5-3) ... Setting up libssw-java (1.1-13) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Setting up libdconf1:amd64 (0.38.0-2) ... Setting up libasound2-data (1.2.4-1.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libz3-4:amd64 (4.8.10-1) ... Setting up libhat-trie0:amd64 (0.1.2-2) ... Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ... Setting up libx11-data (2:1.7.2-1) ... Setting up libepoxy0:amd64 (1.5.5-1) ... Setting up libnspr4:amd64 (2:4.29-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up aglfn (1.7+git20191031.4036a9c-2) ... Setting up libapache-pom-java (18-1) ... Setting up libavahi-common-data:amd64 (0.8-5+deb11u1) ... Setting up libncurses6:amd64 (6.2+20201114-2) ... Setting up libatinject-jsr330-api-java (1.0+ds1-5) ... Setting up libdbus-1-3:amd64 (1.12.24-0+deb11u1) ... Setting up dbus (1.12.24-0+deb11u1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libfribidi0:amd64 (1.0.8-2+deb11u1) ... Setting up libbamtools2.5.1:amd64 (2.5.1+dfsg-9) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up autopoint (0.21-4) ... Setting up binfmt-support (2.2.1-1+deb11u1) ... Created symlink /etc/systemd/system/multi-user.target.wants/binfmt-support.service -> /lib/systemd/system/binfmt-support.service. Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libwebp6:amd64 (0.6.1-2.1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libpcsclite1:amd64 (1.9.1-1) ... Setting up libsensors5:amd64 (1:3.6.0-7) ... Setting up libglapi-mesa:amd64 (20.3.5-1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Setting up libmtdev1:amd64 (1.1.6-1) ... Setting up libvulkan1:amd64 (1.2.162.0-1) ... Setting up autoconf (2.69-14) ... Setting up libjsoncpp24:amd64 (1.9.4-4) ... Setting up libatk1.0-data (2.36.0-2) ... Setting up libmd0:amd64 (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up bamtools (2.5.1+dfsg-9) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libasound2:amd64 (1.2.4-1.1) ... Setting up libmpdec3:amd64 (2.5.1-1) ... Setting up mummer (3.23+dfsg-7) ... Setting up libpam-systemd:amd64 (247.3-7+deb11u1) ... Setting up libmd4c0:amd64 (0.4.7-2) ... Setting up liblua5.4-0:amd64 (5.4.2-2) ... Setting up libsub-override-perl (0.09-2) ... Setting up libthai-data (0.1.28-3) ... Setting up libssh2-1:amd64 (1.9.0-2) ... Setting up libwxbase3.0-0v5:amd64 (3.0.5.1+dfsg-2) ... Setting up libjson-glib-1.0-common (1.6.2-1) ... Setting up libatk1.0-0:amd64 (2.36.0-2) ... Setting up libtiff5:amd64 (4.2.0-1+deb11u1) ... Setting up libwayland-egl1:amd64 (1.18.0-2~exp1.1) ... Setting up glib-networking-common (2.66.0-2) ... Setting up openssl (1.1.1n-0+deb11u3) ... Setting up libbsd0:amd64 (0.11.3-1) ... Setting up libdrm-common (2.4.104-1) ... Setting up libelf1:amd64 (0.183-1) ... Setting up libssw0:amd64 (1.1-13) ... Setting up libevdev2:amd64 (1.11.0+dfsg-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7+deb11u3) ... Setting up libgudev-1.0-0:amd64 (234-1) ... Setting up libprocps8:amd64 (2:3.3.17-5) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up libwacom-common (1.8-2) ... Setting up libxkbcommon0:amd64 (1.0.3-2) ... Setting up libwayland-client0:amd64 (1.18.0-2~exp1.1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up glib-networking-services (2.66.0-2) ... Setting up gnuplot-data (5.4.1+dfsg1-1+deb11u1) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libxcb-xfixes0:amd64 (1.14-3) ... Setting up libxcb-xinput0:amd64 (1.14-3) ... Setting up jarwrapper (0.78) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:amd64 (1.14-3) ... Setting up libxcb-glx0:amd64 (1.14-3) ... Setting up libedit2:amd64 (3.1-20191231-2+b1) ... Setting up libcommons-parent-java (43-1) ... Setting up libxcb-keysyms1:amd64 (0.4.0-1+b2) ... Setting up libxcb-shape0:amd64 (1.14-3) ... Setting up libavahi-common3:amd64 (0.8-5+deb11u1) ... Setting up libldap-2.4-2:amd64 (2.4.57+dfsg-3+deb11u1) ... Setting up libxcb-render-util0:amd64 (0.3.9-1+b1) ... Setting up libcurl3-gnutls:amd64 (7.74.0-1.3+deb11u3) ... Setting up libnss3:amd64 (2:3.61-1+deb11u2) ... Setting up libxcb-shm0:amd64 (1.14-3) ... Setting up libxcb-icccm4:amd64 (0.4.1-1.1) ... Setting up libxcb-util1:amd64 (0.4.0-1+b1) ... Setting up libjson-glib-1.0-0:amd64 (1.6.2-1) ... Setting up libxcb-xkb1:amd64 (1.14-3) ... Setting up libxcb-image0:amd64 (0.4.0-1+b3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxcb-present0:amd64 (1.14-3) ... Setting up dh-autoreconf (20) ... Setting up libthai0:amd64 (0.1.28-3) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up dbus-user-session (1.12.24-0+deb11u1) ... Setting up libxcb-xinerama0:amd64 (1.14-3) ... Setting up libllvm11:amd64 (1:11.0.1-2) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Setting up libguava-java (29.0-6) ... Setting up libxcb-sync1:amd64 (1.14-3) ... Setting up shared-mime-info (2.0-1) ... Setting up libxkbcommon-x11-0:amd64 (1.0.3-2) ... Setting up ucf (3.0043) ... Setting up libqt5core5a:amd64 (5.15.2+dfsg-9) ... Setting up libxcb-dri2-0:amd64 (1.14-3) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libdrm2:amd64 (2.4.104-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libqt5dbus5:amd64 (5.15.2+dfsg-9) ... Setting up libwayland-cursor0:amd64 (1.18.0-2~exp1.1) ... Setting up libxcb-randr0:amd64 (1.14-3) ... Setting up procps (2:3.3.17-5) ... Setting up libxslt1.1:amd64 (1.1.34-4+deb11u1) ... Setting up libx11-6:amd64 (2:1.7.2-1) ... Setting up libharfbuzz0b:amd64 (2.7.4-1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1+deb11u1) ... Setting up libwacom2:amd64 (1.8-2) ... Setting up libxcomposite1:amd64 (1:0.4.5-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libavahi-client3:amd64 (0.8-5+deb11u1) ... Setting up python3.9 (3.9.2-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.104-1) ... Setting up libxcb-dri3-0:amd64 (1.14-3) ... Setting up gtk-update-icon-cache (3.24.24-4+deb11u2) ... Setting up libx11-xcb1:amd64 (2:1.7.2-1) ... Setting up libhts3:amd64 (1.11-4) ... Setting up libdrm-nouveau2:amd64 (2.4.104-1) ... Setting up libxdamage1:amd64 (1:1.1.5-2) ... Setting up libgdk-pixbuf-xlib-2.0-0:amd64 (2.40.2-2) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libcommons-compress-java (1.20-1) ... Setting up libgbm1:amd64 (20.3.5-1) ... Setting up libdrm-radeon1:amd64 (2.4.104-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libdrm-intel1:amd64 (2.4.104-1) ... Setting up libgl1-mesa-dri:amd64 (20.3.5-1) ... Setting up libxext6:amd64 (2:1.3.3-1.1) ... Setting up dconf-service (0.38.0-2) ... Setting up python3 (3.9.2-3) ... Setting up libatspi2.0-0:amd64 (2.38.0-4) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer. Setting up libqt5network5:amd64 (5.15.2+dfsg-9) ... Setting up samtools (1.11-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libinput-bin (1.16.4-3) ... Setting up libatk-bridge2.0-0:amd64 (2.38.0-1) ... Setting up libegl-mesa0:amd64 (20.3.5-1) ... Setting up adwaita-icon-theme (3.38.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libxfixes3:amd64 (1:5.0.3-2) ... Setting up libnotify4:amd64 (0.7.9-3) ... Setting up libgdk-pixbuf2.0-0:amd64 (2.40.2-2) ... Setting up libxinerama1:amd64 (2:1.1.4-2) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libcups2:amd64 (2.3.3op2-3+deb11u2) ... Setting up python3-lxml:amd64 (4.6.3+dfsg-0.1+deb11u1) ... Setting up libegl1:amd64 (1.3.2-1) ... Setting up python3-et-xmlfile (1.0.1-2.1) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up libinput10:amd64 (1.16.4-3) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libglx-mesa0:amd64 (20.3.5-1) ... Setting up python3-pysam (0.15.4+ds-3+b2) ... Setting up python3-setuptools (52.0.0-4) ... Setting up libxi6:amd64 (2:1.7.10-1) ... Setting up libglx0:amd64 (1.3.2-1) ... Setting up dconf-gsettings-backend:amd64 (0.38.0-2) ... Setting up python3-jdcal (1.0-1.3) ... Setting up python3-joblib (0.17.0-4) ... Setting up libxcursor1:amd64 (1:1.2.0-2) ... Setting up fastaq (3.17.0-3) ... Setting up libpango-1.0-0:amd64 (1.46.2-3) ... Setting up python3-all (3.9.2-3) ... Setting up python3-yaml (5.3.1-5) ... Setting up debhelper (13.3.4) ... Setting up python3-nose (1.3.7-7) ... Setting up libcairo2:amd64 (1.16.0-5) ... Setting up python3-pymummer (0.11.0-2) ... Setting up libgl1:amd64 (1.3.2-1) ... Setting up python3-openpyxl (3.0.3-1) ... Setting up libgd3:amd64 (2.3.0-2) ... Setting up spades (3.13.1+dfsg-2+b2) ... Setting up libcairo-gobject2:amd64 (1.16.0-5) ... Setting up libpangoft2-1.0-0:amd64 (1.46.2-3) ... Setting up libgtk-3-common (3.24.24-4+deb11u2) ... Setting up libpangocairo-1.0-0:amd64 (1.46.2-3) ... Setting up gsettings-desktop-schemas (3.38.0-2) ... Setting up libqt5gui5:amd64 (5.15.2+dfsg-9) ... Setting up libqt5widgets5:amd64 (5.15.2+dfsg-9) ... Setting up libqt5printsupport5:amd64 (5.15.2+dfsg-9) ... Setting up glib-networking:amd64 (2.66.0-2) ... Setting up libsoup2.4-1:amd64 (2.72.0-2) ... Setting up libqt5svg5:amd64 (5.15.2-3) ... Setting up libsoup-gnome2.4-1:amd64 (2.72.0-2) ... Setting up librest-0.7-0:amd64 (0.8.1-1.1) ... Setting up libgtk-3-0:amd64 (3.24.24-4+deb11u2) ... Setting up libwxgtk3.0-gtk3-0v5:amd64 (3.0.5.1+dfsg-2) ... Setting up gnuplot-qt (5.4.1+dfsg1-1+deb11u1) ... update-alternatives: using /usr/bin/gnuplot-qt to provide /usr/bin/gnuplot (gnuplot) in auto mode Setting up gnuplot (5.4.1+dfsg1-1+deb11u1) ... Setting up ca-certificates-java (20190909) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory Adding debian:emSign_Root_CA_-_G1.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:TrustCor_ECA-1.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Secure_Global_CA.pem Adding debian:SecureTrust_CA.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Izenpe.com.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:ISRG_Root_X1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:GTS_Root_R4.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R1.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:EC-ACC.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DST_Root_CA_X3.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certigna.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:ACCVRAIZ1.pem done. Setting up default-jre-headless (2:1.11-72) ... Setting up jaligner (1.0+dfsg-7) ... Setting up mhap (2.1.3+dfsg-3) ... Setting up canu (2.0+dfsg-1) ... Processing triggers for libc-bin (2.31-13+deb11u5) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Setting up openjdk-11-jre-headless:amd64 (11.0.16+8-1~deb11u1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/808583/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for bullseye I: user script /srv/workspace/pbuilder/808583/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/circlator-1.5.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../circlator_1.5.6-5_source.changes dpkg-buildpackage: info: source package circlator dpkg-buildpackage: info: source version 1.5.6-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/circlator-1.5.6/.pybuild/cpython3_3.9/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/external_progs.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/versions.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/start_fixer.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/program.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/minimus2.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/merge.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/mapping.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/dnaa.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/common.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/clean.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/bamfilter.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/assembly.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/assemble.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator copying circlator/__init__.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator creating /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/version.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/test.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/progcheck.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/minimus2.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/merge.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/mapreads.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/get_dnaa.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/fixstart.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/clean.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/bam2reads.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/assemble.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/all.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks copying circlator/tasks/__init__.py -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks creating /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data copying circlator/data/test_ref.fa.fai -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data copying circlator/data/test_ref.fa -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data copying circlator/data/test_reads.fq.gz -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data copying circlator/data/test_make_data.sh -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data copying circlator/data/test_for_reads.fa -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data copying circlator/data/test_contigs.fa -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data copying circlator/data/dnaA.fasta -> /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data running build_scripts creating build creating build/scripts-3.9 copying and adjusting scripts/circlator -> build/scripts-3.9 changing mode of build/scripts-3.9/circlator from 644 to 755 debian/rules override_dh_auto_test make[1]: Entering directory '/build/circlator-1.5.6' PYTHONPATH=/build/circlator-1.5.6 nosetests3 -v --where=circlator/tests test _build_spades_kmers ... WARNING: SPAdes version 3.13.1 is being used. It will work, but better results are usually obtained from Circlator using SPAdes version 3.7.1. Although 3.7.1 is not the latest version, we recommend it for Circlator. ok test _make_canu_command ... WARNING: SPAdes version 3.13.1 is being used. It will work, but better results are usually obtained from Circlator using SPAdes version 3.7.1. Although 3.7.1 is not the latest version, we recommend it for Circlator. ok test _make_spades_command ... WARNING: SPAdes version 3.13.1 is being used. It will work, but better results are usually obtained from Circlator using SPAdes version 3.7.1. Although 3.7.1 is not the latest version, we recommend it for Circlator. ok test _rename_canu_contigs ... WARNING: SPAdes version 3.13.1 is being used. It will work, but better results are usually obtained from Circlator using SPAdes version 3.7.1. Although 3.7.1 is not the latest version, we recommend it for Circlator. ok Test _circular_contigs_from_canu_gfa ... ok Test _circular_contigs_from_spades_after_3_6_1 ... ok Test _circular_contigs_from_spades_before_3_6_1 ... ok Test circular_contigs when input is just fasta ... ok Test circular_contigs with spades post 3.6.1 ... ok Test circular_contigs with spades pre 3.6.1 ... ok Test _circular_edges_to_edge_numbers_dict ... ok Test get_contigs ... ok Test _init_file_not_dir ... ok Test _init_post_3_6_1_ok ... ok Test _init_pre_3_6_1_ok ... ok Test _init_raises_error ... ok Test _spades_contigs_paths_to_dict ... ok test _all_reads_from_contig ... ok test _break_reads ... ok test _check_contigs_to_use ... ok test _exclude_region ... ok test _get_all_unmapped_reads ... ok test _get_contigs_to_use ... ok test _get_ref_lengths ... [E::idx_find_and_load] Could not retrieve index file for '/build/circlator-1.5.6/circlator/tests/data/bamfilter_test_get_ref_lengths.bam' ok test _get_region end ... ok test _get_region start ... ok test run keep unmapped bam has no quality scores ... ok test run keep unmapped bam has no quality scores ... ok test run keep unmapped bam has quality scores ... ok test _clean_contigs ... ok test _collapse_list_of_sets ... ok test _containing_contigs ... ok test _contains ... ok test _expand_containing_using_transitivity ... ok test _get_all_containing ... ok test _get_containing_contigs ... ok test _get_contigs_to_keep ... ok test _get_identical_contigs ... ok test _infinite_recursion ... ok test _load_nucmer_hits ... ok test _longest_contig ... ok test _remove_identical_contigs ... ok test _remove_small_contigs ... ok test _write_log ... ok test check_files_exist ... File not found: "thisisnotafileandshouldcauseanerror" ok test _append_stop_to_seq ... ok test _check_sequence ... ok test _get_uniprot_url ... ok test _header_matches_regex ... ok test _header_to_genus_species ... ok test _reverse_translate ... ok Test bwa version ... ok Test canu version ... ok Test nucmer version ... ok Test prodigal version ... ok Test samtools original version ... ok Test samtools version ... ok Test spades version ... ok test aligned_read_to_read ... ok test bwa_index ... ok test bwa_index_clean ... ok test bwa_mem ... ok test _can_circularise ... ok test _contigs_dict_to_file ... ok test _filter_bridging_contigs ... ok test _get_hit_nearest_ref_end ... ok test _get_hit_nearest_ref_start ... ok test _get_longest_hit_at_qry_end ... ok test _get_longest_hit_at_qry_start ... ok test _get_longest_hit_at_ref_end ... ok test _get_longest_hit_at_ref_start ... ok test _get_longest_hit_by_ref_length ... ok test _get_possible_circular_ref_contigs ... ok test _get_possible_circular_ref_contigs same best hits ... ok test _get_possible_query_bridging_contigs ... ok test_get_spades_circular_nodes (merge_test.TestMerge) ... ok test _has_qry_hit_longer_than ... ok test _hits_hashed_by_query ... ok test _hits_have_same_query ... ok test _hits_have_same_reference ... ok test _index_fasta ... ok test _is_at_qry_end ... ok test _is_at_qry_start ... ok test _is_at_ref_end ... ok test _is_at_ref_start ... ok test _load_nucmer_hits ... ok test _make_circularised_contig 1 ... ok test _make_circularised_contig 2 ... ok test _make_new_contig_from_nucmer_and_spades no hit ... ok test _make_new_contig_from_nucmer_and_spades with hit ... ok test _merge_bridged_contig_pair1 ... ok test _merge_bridged_contig_pair2 ... ok test _merge_bridged_contig_pair3 ... ok test _merge_bridged_contig_pair4 ... ok test _min_qry_hit_length ... ok test _orientation_ok_to_bridge_contigs ... ok test _remove_keys_from_dict_with_nonunique_values ... ok test _write_act_files ... ok test _run_initial_merge ... SKIP: Amos is not installed test _run_minimus2 ... SKIP: Amos is not installed test _run_minimus2_on_each_contig ... SKIP: Amos is not installed test_run_minimus2_on_one_contig that won't circularise ... SKIP: Amos is not installed test_run_minimus2_on_one_contig that will circularise ... SKIP: Amos is not installed test _write_split_contig ... SKIP: Amos is not installed test _find_circular_using_prodigal ... ok Test _find_circular_using_promer ... ok Test init ... ok Test _max_length_from_fasta_file ... ok test _rearrange_contigs ... ok Test _rename_contigs ... ok test run with promer, prodigal, and ignoring a sequence ... ok test run when ignoring all sequences ... ok test run when everthing sorted by promer ... ok Test _write_fasta_plus_circularized_ends ... ok Test _write_renamed_contigs ... ok ---------------------------------------------------------------------- Ran 115 tests in 20.458s OK (SKIP=6) make[1]: Leaving directory '/build/circlator-1.5.6' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/circlator-1.5.6/debian/circlator running install running build running build_py running build_scripts running install_lib creating /build/circlator-1.5.6/debian/circlator/usr creating /build/circlator-1.5.6/debian/circlator/usr/lib creating /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9 creating /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages creating /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator creating /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data/dnaA.fasta -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data/test_contigs.fa -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data/test_for_reads.fa -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data/test_make_data.sh -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data/test_reads.fq.gz -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data/test_ref.fa -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/data/test_ref.fa.fai -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/data creating /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/__init__.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/all.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/assemble.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/bam2reads.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/clean.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/fixstart.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/get_dnaa.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/mapreads.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/merge.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/minimus2.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/progcheck.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/test.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/tasks/version.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/__init__.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/assemble.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/assembly.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/bamfilter.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/clean.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/common.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/dnaa.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/mapping.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/merge.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/minimus2.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/program.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/start_fixer.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/versions.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator copying /build/circlator-1.5.6/.pybuild/cpython3_3.9/build/circlator/external_progs.py -> /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/__init__.py to __init__.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/all.py to all.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/assemble.py to assemble.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/bam2reads.py to bam2reads.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/clean.py to clean.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/fixstart.py to fixstart.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/get_dnaa.py to get_dnaa.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/mapreads.py to mapreads.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/merge.py to merge.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/minimus2.py to minimus2.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/progcheck.py to progcheck.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/test.py to test.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/tasks/version.py to version.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/__init__.py to __init__.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/assemble.py to assemble.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/assembly.py to assembly.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/bamfilter.py to bamfilter.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/clean.py to clean.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/common.py to common.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/dnaa.py to dnaa.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/mapping.py to mapping.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/merge.py to merge.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/minimus2.py to minimus2.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/program.py to program.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/start_fixer.py to start_fixer.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/versions.py to versions.cpython-39.pyc byte-compiling /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator/external_progs.py to external_progs.cpython-39.pyc running install_egg_info running egg_info creating circlator.egg-info writing circlator.egg-info/PKG-INFO writing dependency_links to circlator.egg-info/dependency_links.txt writing requirements to circlator.egg-info/requires.txt writing top-level names to circlator.egg-info/top_level.txt writing manifest file 'circlator.egg-info/SOURCES.txt' reading manifest file 'circlator.egg-info/SOURCES.txt' writing manifest file 'circlator.egg-info/SOURCES.txt' Copying circlator.egg-info to /build/circlator-1.5.6/debian/circlator/usr/lib/python3.9/dist-packages/circlator-1.5.5.egg-info Skipping SOURCES.txt running install_scripts creating /build/circlator-1.5.6/debian/circlator/usr/bin copying build/scripts-3.9/circlator -> /build/circlator-1.5.6/debian/circlator/usr/bin changing mode of /build/circlator-1.5.6/debian/circlator/usr/bin/circlator to 755 dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installexamples make[1]: Entering directory '/build/circlator-1.5.6' dh_installexamples cd debian/circlator/usr/share/doc/circlator/examples && tar caf data.tar.xz data --owner=0 --group=0 --numeric-owner --sort=name --mode=a+rX,og-w && rm -rf data make[1]: Leaving directory '/build/circlator-1.5.6' dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'circlator' in '../circlator_1.5.6-5_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../circlator_1.5.6-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/808583/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/808583/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/808583 and its subdirectories I: Current time: Thu Feb 8 18:55:11 +14 2024 I: pbuilder-time-stamp: 1707368111