I: pbuilder: network access will be disabled during build I: Current time: Fri Oct 15 04:35:45 +14 2021 I: pbuilder-time-stamp: 1634222145 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libgpiv_0.6.1-7.1.dsc] I: copying [./libgpiv_0.6.1.orig.tar.gz] I: copying [./libgpiv_0.6.1-7.1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.Axmq_ag_/trustedkeys.kbx': General error gpgv: Signature made Mon Jan 4 06:54:11 2021 +14 gpgv: using RSA key B8BF54137B09D35CF026FE9D091AB856069AAA1C gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libgpiv_0.6.1-7.1.dsc dpkg-source: info: extracting libgpiv in libgpiv-0.6.1 dpkg-source: info: unpacking libgpiv_0.6.1.orig.tar.gz dpkg-source: info: unpacking libgpiv_0.6.1-7.1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 03_lipng16.patch dpkg-source: info: applying 01_omp-pragma.diff dpkg-source: info: applying 02_hdf5.diff dpkg-source: info: applying 04-avoid-bool-keyword.diff dpkg-source: info: applying 05-doxygen_fixes.diff dpkg-source: info: applying 06-am-doxygen-fix.diff I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2086125/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2086125/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2086125/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=1cf17a1e75724094b81248ae0dfa7cf2 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2086125 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.PuHSrsGxvv/pbuilderrc_Fl5p --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.PuHSrsGxvv/b2 --logfile b2/build.log libgpiv_0.6.1-7.1.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Aug 5 10:25 bash -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash -rwxr-xr-x 1 root root 113664 Sep 24 2020 date -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd -rwxr-xr-x 1 root root 93936 Sep 24 2020 df -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir -rwxr-xr-x 1 root root 84440 Jul 29 09:09 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 24 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 69032 Jul 29 09:09 findmnt -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe -rwxr-xr-x 1 root root 98048 Mar 3 2021 gzip -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln -rwxr-xr-x 1 root root 56952 Feb 8 2020 login -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls -rwxr-xr-x 1 root root 149736 Jul 29 09:09 lsblk -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp -rwxr-xr-x 1 root root 59632 Jul 29 09:09 more -rwsr-xr-x 1 root root 55528 Jul 29 09:09 mount -rwxr-xr-x 1 root root 18664 Jul 29 09:09 mountpoint -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd lrwxrwxrwx 1 root root 4 Aug 5 10:25 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Oct 15 04:35 sh -> bash lrwxrwxrwx 1 root root 4 Oct 7 23:25 sh.distrib -> dash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jul 29 09:09 su -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch -rwxr-xr-x 1 root root 39680 Sep 24 2020 true -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jul 29 09:09 umount -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir -rwxr-xr-x 1 root root 63744 Jul 29 09:09 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew I: user script /srv/workspace/pbuilder/2086125/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: autotools-dev, debhelper (>= 10), libfftw3-dev, libglib2.0-dev, libgomp1, libgsl-dev, libhdf5-dev (>= 1.8.8), libpng-dev, mpi-default-dev, netpbm, quilt (>= 0.40), dh-exec, autoconf-archive (>= 20160916-1), doxygen, autoconf-archive (>= 20160916-1) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on autotools-dev; however: Package autotools-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 10); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev (>= 1.8.8); however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on netpbm; however: Package netpbm is not installed. pbuilder-satisfydepends-dummy depends on quilt (>= 0.40); however: Package quilt is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on autoconf-archive (>= 20160916-1); however: Package autoconf-archive is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on autoconf-archive (>= 20160916-1); however: Package autoconf-archive is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} autoconf-archive{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} diffstat{a} doxygen{a} dwz{a} ed{a} file{a} gettext{a} gettext-base{a} gfortran-10{a} groff-base{a} hdf5-helpers{a} ibverbs-providers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libblkid-dev{a} libbsd0{a} libcbor0{a} libclang-cpp11{a} libclang1-11{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1{a} libevent-2.1-7{a} libevent-core-2.1-7{a} libevent-dev{a} libevent-extra-2.1-7{a} libevent-openssl-2.1-7{a} libevent-pthreads-2.1-7{a} libexpat1{a} libfabric1{a} libffi-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libgsl-dev{a} libgsl25{a} libgslcblas0{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu67{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libllvm11{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmount-dev{a} libmpdec3{a} libnetpbm10{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpcre16-3{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix2{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpmix-dev{a} libpmix2{a} libpng-dev{a} libpng16-16{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} librdmacm1{a} libreadline8{a} libselinux1-dev{a} libsepol1-dev{a} libsigsegv2{a} libsub-override-perl{a} libsz2{a} libtiff5{a} libtool{a} libuchardet0{a} libucx0{a} libwebp6{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-dev{a} netpbm{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} quilt{a} readline-common{a} sensible-utils{a} uuid-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl ghostscript javascript-common less libarchive-cpio-perl libcoarrays-openmpi-dev libmail-sendmail-perl libpng-tools lynx shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 159 newly installed, 0 to remove and 0 not upgraded. Need to get 115 MB of archives. After unpacking 487 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 autoconf-archive all 20190106-2.1 [746 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2 [96.9 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libedit2 amd64 3.1-20191231-2+b1 [96.7 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libcbor0 amd64 0.5.0+dfsg-2 [24.0 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 libfido2-1 amd64 1.6.0-2 [53.3 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 openssh-client amd64 1:8.4p1-5 [929 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 dh-exec amd64 0.23.2 [26.6 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 libz3-4 amd64 4.8.10-1 [6949 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 libllvm11 amd64 1:11.0.1-2 [17.9 MB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 libclang-cpp11 amd64 1:11.0.1-2 [9632 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 libclang1-11 amd64 1:11.0.1-2 [5521 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 doxygen amd64 1.9.1-1 [4232 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 ed amd64 1.17-1 [60.7 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 libgfortran-10-dev amd64 10.2.1-6 [769 kB] Get: 61 http://deb.debian.org/debian bullseye/main amd64 gfortran-10 amd64 10.2.1-6 [9447 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 hdf5-helpers amd64 1.10.6+repack-4+deb11u1 [40.4 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libnl-3-200 amd64 3.4.0-1+b1 [63.6 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 libnl-route-3-200 amd64 3.4.0-1+b1 [161 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 libibverbs1 amd64 33.2-1 [59.4 kB] Get: 66 http://deb.debian.org/debian bullseye/main amd64 ibverbs-providers amd64 33.2-1 [253 kB] Get: 67 http://deb.debian.org/debian bullseye/main amd64 libaec0 amd64 1.0.4-1 [20.3 kB] Get: 68 http://deb.debian.org/debian bullseye/main amd64 libsz2 amd64 1.0.4-1 [6760 B] Get: 69 http://deb.debian.org/debian bullseye/main amd64 libaec-dev amd64 1.0.4-1 [18.7 kB] Get: 70 http://deb.debian.org/debian bullseye/main amd64 uuid-dev amd64 2.36.1-8 [99.2 kB] Get: 71 http://deb.debian.org/debian bullseye/main amd64 libblkid-dev amd64 2.36.1-8 [224 kB] Get: 72 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get: 73 http://deb.debian.org/debian bullseye/main amd64 libevent-2.1-7 amd64 2.1.12-stable-1 [188 kB] Get: 74 http://deb.debian.org/debian bullseye/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-1 [139 kB] Get: 75 http://deb.debian.org/debian bullseye/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-1 [110 kB] Get: 76 http://deb.debian.org/debian bullseye/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-1 [57.1 kB] Get: 77 http://deb.debian.org/debian bullseye/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-1 [64.1 kB] Get: 78 http://deb.debian.org/debian bullseye/main amd64 libevent-dev amd64 2.1.12-stable-1 [311 kB] Get: 79 http://deb.debian.org/debian bullseye/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.1 [169 kB] Get: 80 http://deb.debian.org/debian bullseye/main amd64 libnuma1 amd64 2.0.12-1+b1 [26.3 kB] Get: 81 http://deb.debian.org/debian bullseye/main amd64 libpsm2-2 amd64 11.2.185-1 [181 kB] Get: 82 http://deb.debian.org/debian bullseye/main amd64 librdmacm1 amd64 33.2-1 [68.9 kB] Get: 83 http://deb.debian.org/debian bullseye/main amd64 libfabric1 amd64 1.11.0-2 [521 kB] Get: 84 http://deb.debian.org/debian bullseye/main amd64 libffi-dev amd64 3.3-6 [56.5 kB] Get: 85 http://deb.debian.org/debian bullseye/main amd64 libfftw3-double3 amd64 3.3.8-2 [733 kB] Get: 86 http://deb.debian.org/debian bullseye/main amd64 libfftw3-long3 amd64 3.3.8-2 [319 kB] Get: 87 http://deb.debian.org/debian bullseye/main amd64 libfftw3-quad3 amd64 3.3.8-2 [558 kB] Get: 88 http://deb.debian.org/debian bullseye/main amd64 libfftw3-single3 amd64 3.3.8-2 [762 kB] Get: 89 http://deb.debian.org/debian bullseye/main amd64 libfftw3-bin amd64 3.3.8-2 [50.7 kB] Get: 90 http://deb.debian.org/debian bullseye/main amd64 libfftw3-dev amd64 3.3.8-2 [2106 kB] Get: 91 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.8-1 [1370 kB] Get: 92 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-data all 2.66.8-1 [1164 kB] Get: 93 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-bin amd64 2.66.8-1 [141 kB] Get: 94 http://deb.debian.org/debian bullseye/main amd64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 95 http://deb.debian.org/debian bullseye/main amd64 python3-distutils all 3.9.2-1 [143 kB] Get: 96 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-dev-bin amd64 2.66.8-1 [179 kB] Get: 97 http://deb.debian.org/debian bullseye/main amd64 libsepol1-dev amd64 3.1-1 [338 kB] Get: 98 http://deb.debian.org/debian bullseye/main amd64 libpcre2-16-0 amd64 10.36-2 [231 kB] Get: 99 http://deb.debian.org/debian bullseye/main amd64 libpcre2-32-0 amd64 10.36-2 [220 kB] Get: 100 http://deb.debian.org/debian bullseye/main amd64 libpcre2-posix2 amd64 10.36-2 [49.1 kB] Get: 101 http://deb.debian.org/debian bullseye/main amd64 libpcre2-dev amd64 10.36-2 [731 kB] Get: 102 http://deb.debian.org/debian bullseye/main amd64 libselinux1-dev amd64 3.1-3 [168 kB] Get: 103 http://deb.debian.org/debian bullseye/main amd64 libmount-dev amd64 2.36.1-8 [77.8 kB] Get: 104 http://deb.debian.org/debian bullseye/main amd64 libpcre16-3 amd64 2:8.39-13 [259 kB] Get: 105 http://deb.debian.org/debian bullseye/main amd64 libpcre32-3 amd64 2:8.39-13 [250 kB] Get: 106 http://deb.debian.org/debian bullseye/main amd64 libpcrecpp0v5 amd64 2:8.39-13 [152 kB] Get: 107 http://deb.debian.org/debian bullseye/main amd64 libpcre3-dev amd64 2:8.39-13 [650 kB] Get: 108 http://deb.debian.org/debian bullseye/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get: 109 http://deb.debian.org/debian bullseye/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2 [190 kB] Get: 110 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-dev amd64 2.66.8-1 [1577 kB] Get: 111 http://deb.debian.org/debian bullseye/main amd64 libgslcblas0 amd64 2.6+dfsg-2 [102 kB] Get: 112 http://deb.debian.org/debian bullseye/main amd64 libgsl25 amd64 2.6+dfsg-2 [934 kB] Get: 113 http://deb.debian.org/debian bullseye/main amd64 libgsl-dev amd64 2.6+dfsg-2 [1123 kB] Get: 114 http://deb.debian.org/debian bullseye/main amd64 libhdf5-103-1 amd64 1.10.6+repack-4+deb11u1 [1189 kB] Get: 115 http://deb.debian.org/debian bullseye/main amd64 libhdf5-cpp-103-1 amd64 1.10.6+repack-4+deb11u1 [141 kB] Get: 116 http://deb.debian.org/debian bullseye/main amd64 libhdf5-fortran-102 amd64 1.10.6+repack-4+deb11u1 [105 kB] Get: 117 http://deb.debian.org/debian bullseye/main amd64 libhdf5-hl-100 amd64 1.10.6+repack-4+deb11u1 [81.8 kB] Get: 118 http://deb.debian.org/debian bullseye/main amd64 libhdf5-hl-fortran-100 amd64 1.10.6+repack-4+deb11u1 [56.8 kB] Get: 119 http://deb.debian.org/debian bullseye/main amd64 libhdf5-hl-cpp-100 amd64 1.10.6+repack-4+deb11u1 [37.7 kB] Get: 120 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get: 121 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo-dev amd64 1:2.0.6-4 [278 kB] Get: 122 http://deb.debian.org/debian bullseye/main amd64 libjpeg-dev amd64 1:2.0.6-4 [67.8 kB] Get: 123 http://deb.debian.org/debian bullseye/main amd64 libhdf5-dev amd64 1.10.6+repack-4+deb11u1 [2438 kB] Get: 124 http://deb.debian.org/debian bullseye/main amd64 libhwloc15 amd64 2.4.1+dfsg-1 [150 kB] Get: 125 http://deb.debian.org/debian bullseye/main amd64 libnuma-dev amd64 2.0.12-1+b1 [39.3 kB] Get: 126 http://deb.debian.org/debian bullseye/main amd64 libltdl7 amd64 2.4.6-15 [391 kB] Get: 127 http://deb.debian.org/debian bullseye/main amd64 libltdl-dev amd64 2.4.6-15 [162 kB] Get: 128 http://deb.debian.org/debian bullseye/main amd64 libhwloc-dev amd64 2.4.1+dfsg-1 [231 kB] Get: 129 http://deb.debian.org/debian bullseye/main amd64 libpciaccess0 amd64 0.16-1 [53.6 kB] Get: 130 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 131 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 132 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get: 133 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.7.2-1 [311 kB] Get: 134 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.7.2-1 [772 kB] Get: 135 http://deb.debian.org/debian bullseye/main amd64 libxext6 amd64 2:1.3.3-1.1 [52.7 kB] Get: 136 http://deb.debian.org/debian bullseye/main amd64 libxnvctrl0 amd64 460.91.03-1 [26.9 kB] Get: 137 http://deb.debian.org/debian bullseye/main amd64 ocl-icd-libopencl1 amd64 2.2.14-2 [42.5 kB] Get: 138 http://deb.debian.org/debian bullseye/main amd64 libhwloc-plugins amd64 2.4.1+dfsg-1 [21.4 kB] Get: 139 http://deb.debian.org/debian bullseye/main amd64 libnl-3-dev amd64 3.4.0-1+b1 [102 kB] Get: 140 http://deb.debian.org/debian bullseye/main amd64 libnl-route-3-dev amd64 3.4.0-1+b1 [176 kB] Get: 141 http://deb.debian.org/debian bullseye/main amd64 libibverbs-dev amd64 33.2-1 [487 kB] Get: 142 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 143 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 144 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 145 http://deb.debian.org/debian bullseye/main amd64 libnetpbm10 amd64 2:10.0-15.4 [86.2 kB] Get: 146 http://deb.debian.org/debian bullseye/main amd64 libpmix2 amd64 4.0.0-4.1 [552 kB] Get: 147 http://deb.debian.org/debian bullseye/main amd64 libucx0 amd64 1.10.1~rc1+really.1.10.0-1 [649 kB] Get: 148 http://deb.debian.org/debian bullseye/main amd64 libopenmpi3 amd64 4.1.0-10 [2370 kB] Get: 149 http://deb.debian.org/debian bullseye/main amd64 openmpi-common all 4.1.0-10 [179 kB] Get: 150 http://deb.debian.org/debian bullseye/main amd64 libpmix-dev amd64 4.0.0-4.1 [655 kB] Get: 151 http://deb.debian.org/debian bullseye/main amd64 openmpi-bin amd64 4.1.0-10 [238 kB] Get: 152 http://deb.debian.org/debian bullseye/main amd64 libopenmpi-dev amd64 4.1.0-10 [1192 kB] Get: 153 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get: 154 http://deb.debian.org/debian bullseye/main amd64 libpng-dev amd64 1.6.37-3 [298 kB] Get: 155 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1 [258 kB] Get: 156 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1 [289 kB] Get: 157 http://deb.debian.org/debian bullseye/main amd64 mpi-default-dev amd64 1.13 [5476 B] Get: 158 http://deb.debian.org/debian bullseye/main amd64 netpbm amd64 2:10.0-15.4 [1011 kB] Get: 159 http://deb.debian.org/debian bullseye/main amd64 quilt all 0.66-2.1 [319 kB] Fetched 115 MB in 1s (94.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8_amd64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../1-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../3-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package autoconf-archive. Preparing to unpack .../5-autoconf-archive_20190106-2.1_all.deb ... Unpacking autoconf-archive (20190106-2.1) ... Selecting previously unselected package libpython3.9-minimal:amd64. Preparing to unpack .../6-libpython3.9-minimal_3.9.2-1_amd64.deb ... Unpacking libpython3.9-minimal:amd64 (3.9.2-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../7-libexpat1_2.2.10-2_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../8-python3.9-minimal_3.9.2-1_amd64.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:amd64 (3.9.2-1) ... Setting up libexpat1:amd64 (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21684 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../2-libmpdec3_2.5.1-1_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../4-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../5-libpython3.9-stdlib_3.9.2-1_amd64.deb ... Unpacking libpython3.9-stdlib:amd64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../6-python3.9_3.9.2-1_amd64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../7-libpython3-stdlib_3.9.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22105 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libmd0:amd64. Preparing to unpack .../006-libmd0_1.0.3-3_amd64.deb ... Unpacking libmd0:amd64 (1.0.3-3) ... Selecting previously unselected package libbsd0:amd64. 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Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libibverbs1:amd64 (33.2-1) ... Setting up ibverbs-providers:amd64 (33.2-1) ... Setting up openssh-client (1:8.4p1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:amd64 (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxnvctrl0:amd64 (460.91.03-1) ... Setting up libclang-cpp11 (1:11.0.1-2) ... Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1+b1) ... Setting up libltdl-dev:amd64 (2.4.6-15) ... Setting up libhdf5-hl-cpp-100:amd64 (1.10.6+repack-4+deb11u1) ... Setting up doxygen (1.9.1-1) ... Setting up libhdf5-fortran-102:amd64 (1.10.6+repack-4+deb11u1) ... Setting up libhdf5-hl-fortran-100:amd64 (1.10.6+repack-4+deb11u1) ... Setting up libhwloc-dev:amd64 (2.4.1+dfsg-1) ... Setting up python3.9 (3.9.2-1) ... 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Setting up openmpi-bin (4.1.0-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:amd64 (4.1.0-10) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up mpi-default-dev (1.13) ... Processing triggers for libc-bin (2.31-13+deb11u2) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package hostname: Name or service not known I: Running cd /build/libgpiv-0.6.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libgpiv_0.6.1-7.1_source.changes dpkg-buildpackage: info: source package libgpiv dpkg-buildpackage: info: source version 0.6.1-7.1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Holger Levsen dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --builddirectory=build-doc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_clean override_dh_auto_clean rm -rf /build/libgpiv-0.6.1/debian/tmp-mpi make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_autoreconf_clean -O--builddirectory=build-doc dh_clean -O--builddirectory=build-doc dh clean --builddirectory=build-serial debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_clean override_dh_auto_clean rm -rf /build/libgpiv-0.6.1/debian/tmp-mpi make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_autoreconf_clean -O--builddirectory=build-serial dh_clean -O--builddirectory=build-serial dh clean --builddirectory=build-mpi debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_clean override_dh_auto_clean rm -rf /build/libgpiv-0.6.1/debian/tmp-mpi make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_autoreconf_clean -O--builddirectory=build-mpi dh_clean -O--builddirectory=build-mpi debian/rules build dh build --builddirectory=build-doc dh_update_autotools_config -O--builddirectory=build-doc dh_autoreconf -O--builddirectory=build-doc aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.in, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:98: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:98: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:36: installing './compile' configure.in:98: installing './missing' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' lib/Makefile.am:22: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-serial -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-serial && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== dh_auto_configure --builddirectory=build-mpi -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi cd build-mpi && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes configure: WARNING: "libmpi HAS BEEN installed" checking for main in -lmpi... yes checking mpi.h usability... yes checking mpi.h presence... no configure: WARNING: mpi.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: mpi.h: proceeding with the compiler's result checking for mpi.h... yes checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Message Passing Interface (MPI) for processing on distributed memory systems building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-doc -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-doc && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_build --builddirectory=build-serial cd build-serial && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o genpar.lo ../../lib/genpar.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam.lo ../../lib/cam.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam_par.lo ../../lib/cam_par.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig.lo ../../lib/trig.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig_par.lo ../../lib/trig_par.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img.lo ../../lib/img.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img_utils.lo ../../lib/img_utils.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc.lo ../../lib/imgproc.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_deform.lo ../../lib/imgproc_deform.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_par.lo ../../lib/imgproc_par.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io.lo ../../lib/io.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_png.lo ../../lib/io_png.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_raw.lo ../../lib/io_raw.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_hdf.lo ../../lib/io_hdf.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_dav.lo ../../lib/io_dav.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -fPIC -DPIC -o .libs/img.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -fPIC -DPIC -o .libs/img_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -fPIC -DPIC -o .libs/trig.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -fPIC -DPIC -o .libs/trig_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -fPIC -DPIC -o .libs/genpar.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -fPIC -DPIC -o .libs/io_png.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -fPIC -DPIC -o .libs/io.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -fPIC -DPIC -o .libs/cam_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -fPIC -DPIC -o .libs/cam.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -fPIC -DPIC -o .libs/imgproc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -o trig_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -fPIC -DPIC -o .libs/io_hdf.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -o trig.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -fPIC -DPIC -o .libs/imgproc_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -fPIC -DPIC -o .libs/io_raw.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -fPIC -DPIC -o .libs/imgproc_deform.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -o cam_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -fPIC -DPIC -o .libs/io_dav.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -o cam.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo ../../lib/utils.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils_alloc.lo ../../lib/utils_alloc.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv.lo ../../lib/piv.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_par.lo ../../lib/piv_par.c ../../lib/io.c: In function 'gpiv_find_pivdata_origin': ../../lib/io.c:379:28: warning: comparison between pointer and zero character constant [-Wpointer-compare] 379 | if (strstr(line, "rr") != '\0') { | ^~ ../../lib/io.c:379:9: note: did you mean to dereference the pointer? 379 | if (strstr(line, "rr") != '\0') { | ^ ../../lib/io.c:381:38: warning: comparison between pointer and zero character constant [-Wpointer-compare] 381 | } else if (strstr(line, "DaVis") != '\0') { | ^~ ../../lib/io.c:381:16: note: did you mean to dereference the pointer? 381 | } else if (strstr(line, "DaVis") != '\0') { | ^ ../../lib/io.c: In function 'find_data_scaled': ../../lib/io.c:1201:30: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1201 | if (strstr(line,"scale") != '\0') { | ^~ ../../lib/io.c:1201:9: note: did you mean to dereference the pointer? 1201 | if (strstr(line,"scale") != '\0') { | ^ ../../lib/img.c: In function 'gpiv_img_read_header': ../../lib/img.c:939:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 939 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/img.c:939:28: warning: comparison between pointer and integer 939 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'count_asciidata': ../../lib/io.c:1243:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 1243 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/io.c:1243:28: warning: comparison between pointer and integer 1243 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'read_pivdata_from_stdin': ../../lib/io.c:1579:27: warning: comparison between pointer and integer 1579 | while (gets (line[k]) != NULL) { | ^~ ../../lib/io.c: In function 'read_scdata_from_stdin': ../../lib/io.c:1671:27: warning: comparison between pointer and integer 1671 | while (gets (line[k]) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -fPIC -DPIC -o .libs/utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -o genpar.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -fPIC -DPIC -o .libs/utils_alloc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -o io_dav.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -o img_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -o imgproc_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -fPIC -DPIC -o .libs/piv_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -fPIC -DPIC -o .libs/piv.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -o io_raw.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_utils.lo ../../lib/piv_utils.c ../../lib/utils.c: In function 'gpiv_add_datetime_to_comment': ../../lib/utils.c:232:5: warning: 'g_date_set_time' is deprecated: Use 'g_date_set_time_t' instead [-Wdeprecated-declarations] 232 | g_date_set_time(gdate, time (NULL)); | ^~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:43, from ../../include/gpiv.h:202, from ../../lib/utils.c:51: /usr/include/glib-2.0/glib/gdate.h:203:14: note: declared here 203 | void g_date_set_time (GDate *date, | ^~~~~~~~~~~~~~~ ../../lib/utils.c:234:13: warning: Deprecated pre-processor symbol, replace with 234 | g_date_day (gdate), | ^ ~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:235:13: warning: Deprecated pre-processor symbol, replace with 235 | g_date_month (gdate), | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:236:13: warning: Deprecated pre-processor symbol, replace with 236 | g_date_year (gdate)); | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:247:36: warning: too many arguments for format [-Wformat-extra-args] 247 | comment = g_strdup_printf ("%s%s", cdate, ctime, NULL); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_iph': ../../lib/utils.c:708:9: warning: writing into constant object (argument 3) [-Wformat=] 708 | sscanf (line, "%s %d", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_cph': ../../lib/utils.c:748:9: warning: writing into constant object (argument 3) [-Wformat=] 748 | sscanf (line, "%s %c", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_fph': ../../lib/utils.c:789:9: warning: writing into constant object (argument 3) [-Wformat=] 789 | sscanf (line, "%s %f", par_name, parameter); | ^~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -o io_png.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid.lo ../../lib/valid.c ../../lib/piv_par.c: In function 'gpiv_piv_read_parameters': ../../lib/piv_par.c:279:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 279 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/piv_par.c:279:28: warning: comparison between pointer and integer 279 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -o io_hdf.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -fPIC -DPIC -o .libs/piv_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -o imgproc.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid_par.lo ../../lib/valid_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -o io.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post.lo ../../lib/post.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -o imgproc_deform.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -fPIC -DPIC -o .libs/valid.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -o utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -o img.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -fPIC -DPIC -o .libs/valid_par.o /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_par.lo ../../lib/post_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -o utils_alloc.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -fPIC -DPIC -o .libs/post.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -fPIC -DPIC -o .libs/post_par.o ../../lib/piv_utils.c: In function 'gpiv_piv_gnuplot': ../../lib/piv_utils.c:581:47: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 581 | "gnuplot -bg %s -geometry %dx%d %s", | ^~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, 583 | fname_cmd); | ~~~~~~~~~ ../../lib/piv_utils.c:580:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 580 | snprintf (command, GPIV_MAX_CHARS, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 | "gnuplot -bg %s -geometry %dx%d %s", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 | fname_cmd); | ~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -o piv_utils.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_utils.lo ../../lib/post_utils.c ../../lib/valid_par.c: In function 'gpiv_valid_read_parameters': ../../lib/valid_par.c:184:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 184 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/valid_par.c:184:28: warning: comparison between pointer and integer 184 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -o piv_par.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o my_utils.lo ../../lib/my_utils.c ../../lib/post_par.c: In function 'gpiv_post_read_parameters': ../../lib/post_par.c:295:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 295 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/post_par.c:295:28: warning: comparison between pointer and integer 295 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -fPIC -DPIC -o .libs/post_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -fPIC -DPIC -o .libs/my_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -o post_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -o valid_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -o valid.o >/dev/null 2>&1 ../../lib/my_utils.c: In function 'my_utils_fopen_tmp': ../../lib/my_utils.c:55:27: warning: implicit declaration of function 'g_mkdir'; did you mean 'rmdir'? [-Wimplicit-function-declaration] 55 | if ((return_val = g_mkdir(tmp_user_dir, 700)) != 0) { | ^~~~~~~ | rmdir ../../lib/post_utils.c: In function 'gpiv_scalar_gnuplot': ../../lib/post_utils.c:192:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:192:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -o my_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -o post.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_histo_gnuplot': ../../lib/post_utils.c:539:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:539:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -o post_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -o piv.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=link x86_64-linux-gnu-gcc -fopenmp -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libgpiv.la -rpath /usr/lib/x86_64-linux-gnu genpar.lo cam.lo cam_par.lo trig.lo trig_par.lo img.lo img_utils.lo imgproc.lo imgproc_deform.lo imgproc_par.lo io.lo io_png.lo io_raw.lo io_hdf.lo io_dav.lo utils.lo utils_alloc.lo piv.lo piv_par.lo piv_utils.lo valid.lo valid_par.lo post.lo post_par.lo post_utils.lo my_utils.lo -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 libtool: link: x86_64-linux-gnu-gcc -shared -fPIC -DPIC .libs/genpar.o .libs/cam.o .libs/cam_par.o .libs/trig.o .libs/trig_par.o .libs/img.o .libs/img_utils.o .libs/imgproc.o .libs/imgproc_deform.o .libs/imgproc_par.o .libs/io.o .libs/io_png.o .libs/io_raw.o .libs/io_hdf.o .libs/io_dav.o .libs/utils.o .libs/utils_alloc.o .libs/piv.o .libs/piv_par.o .libs/piv_utils.o .libs/valid.o .libs/valid_par.o .libs/post.o .libs/post_par.o .libs/post_utils.o .libs/my_utils.o -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 -fopenmp -g -O2 -fstack-protector-strong -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -fopenmp -Wl,-soname -Wl,libgpiv.so.3 -o .libs/libgpiv.so.3.0.0 /usr/bin/ld: .libs/img.o: in function `gpiv_img_read_header': ./build-serial/lib/../../lib/img.c:939: warning: the `gets' function is dangerous and should not be used. libtool: link: (cd ".libs" && rm -f "libgpiv.so.3" && ln -s "libgpiv.so.3.0.0" "libgpiv.so.3") libtool: link: (cd ".libs" && rm -f "libgpiv.so" && ln -s "libgpiv.so.3.0.0" "libgpiv.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libgpiv.a genpar.o cam.o cam_par.o trig.o trig_par.o img.o img_utils.o imgproc.o imgproc_deform.o imgproc_par.o io.o io_png.o io_raw.o io_hdf.o io_dav.o utils.o utils_alloc.o piv.o piv_par.o piv_utils.o valid.o valid_par.o post.o post_par.o post_utils.o my_utils.o libtool: link: x86_64-linux-gnu-ranlib .libs/libgpiv.a libtool: link: ( cd ".libs" && rm -f "libgpiv.la" && ln -s "../libgpiv.la" "libgpiv.la" ) make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_build --builddirectory=build-mpi cd build-mpi && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o genpar.lo ../../lib/genpar.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam.lo ../../lib/cam.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam_par.lo ../../lib/cam_par.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig.lo ../../lib/trig.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig_par.lo ../../lib/trig_par.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img.lo ../../lib/img.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img_utils.lo ../../lib/img_utils.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc.lo ../../lib/imgproc.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_deform.lo ../../lib/imgproc_deform.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_par.lo ../../lib/imgproc_par.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io.lo ../../lib/io.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_png.lo ../../lib/io_png.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_raw.lo ../../lib/io_raw.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_hdf.lo ../../lib/io_hdf.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_dav.lo ../../lib/io_dav.c libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -fPIC -DPIC -o .libs/cam.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -fPIC -DPIC -o .libs/imgproc.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -fPIC -DPIC -o .libs/genpar.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -fPIC -DPIC -o .libs/cam_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -fPIC -DPIC -o .libs/trig.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -fPIC -DPIC -o .libs/io_dav.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -fPIC -DPIC -o .libs/img.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -fPIC -DPIC -o .libs/trig_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -fPIC -DPIC -o .libs/imgproc_deform.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -fPIC -DPIC -o .libs/io.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -o cam.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -fPIC -DPIC -o .libs/io_png.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -fPIC -DPIC -o .libs/imgproc_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -fPIC -DPIC -o .libs/img_utils.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -fPIC -DPIC -o .libs/io_raw.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -fPIC -DPIC -o .libs/io_hdf.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -o trig_par.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -o trig.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -o cam_par.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo ../../lib/utils.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils_alloc.lo ../../lib/utils_alloc.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv.lo ../../lib/piv.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_par.lo ../../lib/piv_par.c ../../lib/io.c: In function 'gpiv_find_pivdata_origin': ../../lib/io.c:379:28: warning: comparison between pointer and zero character constant [-Wpointer-compare] 379 | if (strstr(line, "rr") != '\0') { | ^~ ../../lib/io.c:379:9: note: did you mean to dereference the pointer? 379 | if (strstr(line, "rr") != '\0') { | ^ ../../lib/io.c:381:38: warning: comparison between pointer and zero character constant [-Wpointer-compare] 381 | } else if (strstr(line, "DaVis") != '\0') { | ^~ ../../lib/io.c:381:16: note: did you mean to dereference the pointer? 381 | } else if (strstr(line, "DaVis") != '\0') { | ^ ../../lib/io.c: In function 'find_data_scaled': ../../lib/io.c:1201:30: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1201 | if (strstr(line,"scale") != '\0') { | ^~ ../../lib/io.c:1201:9: note: did you mean to dereference the pointer? 1201 | if (strstr(line,"scale") != '\0') { | ^ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -fPIC -DPIC -o .libs/utils_alloc.o ../../lib/io.c: In function 'count_asciidata': ../../lib/io.c:1243:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 1243 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/io.c:1243:28: warning: comparison between pointer and integer 1243 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'read_pivdata_from_stdin': ../../lib/io.c:1579:27: warning: comparison between pointer and integer 1579 | while (gets (line[k]) != NULL) { | ^~ ../../lib/io.c: In function 'read_scdata_from_stdin': ../../lib/io.c:1671:27: warning: comparison between pointer and integer 1671 | while (gets (line[k]) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -o io_dav.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -fPIC -DPIC -o .libs/utils.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -fPIC -DPIC -o .libs/piv.o ../../lib/img.c: In function 'gpiv_img_read_header': ../../lib/img.c:939:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 939 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/img.c:939:28: warning: comparison between pointer and integer 939 | while (gets (line) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -o genpar.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -fPIC -DPIC -o .libs/piv_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -o imgproc_par.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -o img_utils.o >/dev/null 2>&1 ../../lib/utils.c: In function 'gpiv_add_datetime_to_comment': ../../lib/utils.c:232:5: warning: 'g_date_set_time' is deprecated: Use 'g_date_set_time_t' instead [-Wdeprecated-declarations] 232 | g_date_set_time(gdate, time (NULL)); | ^~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:43, from ../../include/gpiv.h:202, from ../../lib/utils.c:51: /usr/include/glib-2.0/glib/gdate.h:203:14: note: declared here 203 | void g_date_set_time (GDate *date, | ^~~~~~~~~~~~~~~ ../../lib/utils.c:234:13: warning: Deprecated pre-processor symbol, replace with 234 | g_date_day (gdate), | ^ ~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:235:13: warning: Deprecated pre-processor symbol, replace with 235 | g_date_month (gdate), | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:236:13: warning: Deprecated pre-processor symbol, replace with 236 | g_date_year (gdate)); | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:247:36: warning: too many arguments for format [-Wformat-extra-args] 247 | comment = g_strdup_printf ("%s%s", cdate, ctime, NULL); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_iph': ../../lib/utils.c:708:9: warning: writing into constant object (argument 3) [-Wformat=] 708 | sscanf (line, "%s %d", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_cph': ../../lib/utils.c:748:9: warning: writing into constant object (argument 3) [-Wformat=] 748 | sscanf (line, "%s %c", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_fph': ../../lib/utils.c:789:9: warning: writing into constant object (argument 3) [-Wformat=] 789 | sscanf (line, "%s %f", par_name, parameter); | ^~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -o imgproc.o >/dev/null 2>&1 ../../lib/piv_par.c: In function 'gpiv_piv_read_parameters': ../../lib/piv_par.c:279:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 279 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/piv_par.c:279:28: warning: comparison between pointer and integer 279 | while (gets (line) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -o io_png.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -o imgproc_deform.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_utils.lo ../../lib/piv_utils.c libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -o io_raw.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -o utils_alloc.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -o utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -fPIC -DPIC -o .libs/piv_utils.o /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid.lo ../../lib/valid.c libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -o io_hdf.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid_par.lo ../../lib/valid_par.c libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -fPIC -DPIC -o .libs/valid.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -o io.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -fPIC -DPIC -o .libs/valid_par.o /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post.lo ../../lib/post.c libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -o img.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_par.lo ../../lib/post_par.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_utils.lo ../../lib/post_utils.c /bin/sh ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o my_utils.lo ../../lib/my_utils.c ../../lib/piv_utils.c: In function 'gpiv_piv_gnuplot': ../../lib/piv_utils.c:581:47: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 581 | "gnuplot -bg %s -geometry %dx%d %s", | ^~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, 583 | fname_cmd); | ~~~~~~~~~ ../../lib/piv_utils.c:580:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 580 | snprintf (command, GPIV_MAX_CHARS, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 | "gnuplot -bg %s -geometry %dx%d %s", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 | fname_cmd); | ~~~~~~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -fPIC -DPIC -o .libs/post.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -fPIC -DPIC -o .libs/post_utils.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -o piv_par.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -fPIC -DPIC -o .libs/post_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -fPIC -DPIC -o .libs/my_utils.o ../../lib/valid_par.c: In function 'gpiv_valid_read_parameters': ../../lib/valid_par.c:184:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 184 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/valid_par.c:184:28: warning: comparison between pointer and integer 184 | while (gets (line) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -o piv_utils.o >/dev/null 2>&1 ../../lib/post_par.c: In function 'gpiv_post_read_parameters': ../../lib/post_par.c:295:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 295 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/post_par.c:295:28: warning: comparison between pointer and integer 295 | while (gets (line) != NULL) { | ^~ ../../lib/my_utils.c: In function 'my_utils_fopen_tmp': ../../lib/my_utils.c:55:27: warning: implicit declaration of function 'g_mkdir'; did you mean 'rmdir'? [-Wimplicit-function-declaration] 55 | if ((return_val = g_mkdir(tmp_user_dir, 700)) != 0) { | ^~~~~~~ | rmdir libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -o my_utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -o valid_par.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_scalar_gnuplot': ../../lib/post_utils.c:192:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:192:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -o post_par.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_histo_gnuplot': ../../lib/post_utils.c:539:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:539:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -o post_utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -o valid.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -o piv.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -o post.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=link mpicc -fopenmp -DENABLE_MPI -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libgpiv_mpi.la -rpath /usr/lib/x86_64-linux-gnu genpar.lo cam.lo cam_par.lo trig.lo trig_par.lo img.lo img_utils.lo imgproc.lo imgproc_deform.lo imgproc_par.lo io.lo io_png.lo io_raw.lo io_hdf.lo io_dav.lo utils.lo utils_alloc.lo piv.lo piv_par.lo piv_utils.lo valid.lo valid_par.lo post.lo post_par.lo post_utils.lo my_utils.lo -lfftw3_threads -lgomp -lmpi -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 libtool: link: x86_64-linux-gnu-gcc -shared -fPIC -DPIC .libs/genpar.o .libs/cam.o .libs/cam_par.o .libs/trig.o .libs/trig_par.o .libs/img.o .libs/img_utils.o .libs/imgproc.o .libs/imgproc_deform.o .libs/imgproc_par.o .libs/io.o .libs/io_png.o .libs/io_raw.o .libs/io_hdf.o .libs/io_dav.o .libs/utils.o .libs/utils_alloc.o .libs/piv.o .libs/piv_par.o .libs/piv_utils.o .libs/valid.o .libs/valid_par.o .libs/post.o .libs/post_par.o .libs/post_utils.o .libs/my_utils.o -lfftw3_threads -lgomp -lmpi -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 -fopenmp -g -O2 -fstack-protector-strong -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -fopenmp -Wl,-soname -Wl,libgpiv_mpi.so.3 -o .libs/libgpiv_mpi.so.3.0.0 /usr/bin/ld: .libs/img.o: in function `gpiv_img_read_header': ./build-mpi/lib/../../lib/img.c:939: warning: the `gets' function is dangerous and should not be used. libtool: link: (cd ".libs" && rm -f "libgpiv_mpi.so.3" && ln -s "libgpiv_mpi.so.3.0.0" "libgpiv_mpi.so.3") libtool: link: (cd ".libs" && rm -f "libgpiv_mpi.so" && ln -s "libgpiv_mpi.so.3.0.0" "libgpiv_mpi.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libgpiv_mpi.a genpar.o cam.o cam_par.o trig.o trig_par.o img.o img_utils.o imgproc.o imgproc_deform.o imgproc_par.o io.o io_png.o io_raw.o io_hdf.o io_dav.o utils.o utils_alloc.o piv.o piv_par.o piv_utils.o valid.o valid_par.o post.o post_par.o post_utils.o my_utils.o libtool: link: x86_64-linux-gnu-ranlib .libs/libgpiv_mpi.a libtool: link: ( cd ".libs" && rm -f "libgpiv_mpi.la" && ln -s "../libgpiv_mpi.la" "libgpiv_mpi.la" ) make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/libgpiv-0.6.1' /usr/bin/make -C build-doc/ doxygen-doc make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' rm -rf doxygen-doc SRCDIR='..' PROJECT='libgpiv' VERSION='0.6.1' PERL_PATH='/usr/bin/perl' HAVE_DOT='NO' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' DOCDIR=doxygen-doc /usr/bin/doxygen ../Doxyfile warning: Tag 'DETAILS_AT_TOP' at line 24 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 69 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 120 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 131 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 184 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 185 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 217 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 222 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:180: warning: argument 'genpar_par' of command @param is not found in the argument list of gpiv_genpar_cp_parameters(const GpivGenPar *gen_par) /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:184: warning: The following parameter of gpiv_genpar_cp_parameters(const GpivGenPar *gen_par) is not documented: parameter 'gen_par' /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:107: warning: argument 'gen_par_par_default' of command @param is not found in the argument list of gpiv_genpar_default_parameters(GpivGenPar *gen_par_default, const gboolean force) /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:112: warning: The following parameter of gpiv_genpar_default_parameters(GpivGenPar *gen_par_default, const gboolean force) is not documented: parameter 'gen_par_default' /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:121: warning: argument 'general_par' of command @param is not found in the argument list of gpiv_genpar_read_parameters(FILE *fp_h, GpivGenPar *gen_par, const gboolean print_par) /build/libgpiv-0.6.1/include/gpiv/gpiv-imgproc.h:174: warning: argument 'image_proc_par' from the argument list of gpiv_imgproc_read_parameters has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_utils.h:101: warning: argument 'piv_data' from the argument list of gpiv_free_pivdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_utils.h:66: warning: argument 'piv_data' from the argument list of gpiv_null_pivdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_par.h:258: warning: argument 'post_par' from the argument list of gpiv_post_check_parameters_read has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:141: warning: argument 'bin_data' from the argument list of gpiv_free_bindata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:87: warning: argument 'scal_data' from the argument list of gpiv_free_scdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:118: warning: argument 'bin_data' from the argument list of gpiv_null_bindata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:62: warning: argument 'scal_data' from the argument list of gpiv_null_scdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-trig.h:256: warning: argument 'trig_par' from the argument list of gpiv_trig_test_parameter has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:275: warning: The following parameter of gpiv_free_imatrix_index(gint **m, const long nrl, const long nrh, const long ncl, const long nch) is not documented: parameter 'm' /build/libgpiv-0.6.1/include/gpiv/gpiv-valid.h:169: warning: argument 'piv_data' from the argument list of gpiv_valid_gradient has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:195: warning: argument 'valid_par' from the argument list of gpiv_valid_check_parameters_read has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:131: warning: argument 'valid_par' from the argument list of gpiv_valid_parameters_set has multiple @param documentation sections sh: line 1: dot: command not found sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_d44c64559bbebec7f509842c48db8b23_dep.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_d44c64559bbebec7f509842c48db8b23_dep.png"' error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-genpar_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-genpar_8h__dep__incl.png"' sh: line 1: dot: command not found sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img__utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img__utils_8h__dep__incl.png"' error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__incl.png"' sh: line 1: dot: command not found sh: line 1: dot: command not found sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-io_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-io_8h__dep__incl.png"' error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv_8h__incl.png"' error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-imgproc_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-imgproc_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__par_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__par_8h__dep__incl.png"' sh: line 1: dot: command not found sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__incl.png"' error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__utils_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__par_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__par_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__utils_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_trig_par__coll__graph.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_trig_par__coll__graph.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img_8h__dep__incl.png"' sh: line 1: dot: command not found sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils__alloc_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils__alloc_8h__dep__incl.png"' error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/graph_legend.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/graph_legend.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid__par_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid__par_8h__dep__incl.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_post_par__coll__graph.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_post_par__coll__graph.png"' sh: line 1: dot: command not found error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_image__coll__graph.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_image__coll__graph.png"' error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_d44c64559bbebec7f509842c48db8b23_dep.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-genpar_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img__utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-imgproc_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-io_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__par_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__par_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils__alloc_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid__par_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_image__coll__graph.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_post_par__coll__graph.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_trig_par__coll__graph.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. echo Timestamp >doxygen-doc/libgpiv.tag make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_auto_test -O--builddirectory=build-doc cd build-doc && make -j15 check VERBOSE=1 make[1]: Entering directory '/build/libgpiv-0.6.1/build-doc' Making check in lib make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc/lib' /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o genpar.lo ../../lib/genpar.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam.lo ../../lib/cam.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam_par.lo ../../lib/cam_par.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig.lo ../../lib/trig.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig_par.lo ../../lib/trig_par.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img.lo ../../lib/img.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img_utils.lo ../../lib/img_utils.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc.lo ../../lib/imgproc.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_deform.lo ../../lib/imgproc_deform.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_par.lo ../../lib/imgproc_par.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io.lo ../../lib/io.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_png.lo ../../lib/io_png.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_raw.lo ../../lib/io_raw.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_hdf.lo ../../lib/io_hdf.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_dav.lo ../../lib/io_dav.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -fPIC -DPIC -o .libs/cam.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -fPIC -DPIC -o .libs/io.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -fPIC -DPIC -o .libs/trig.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -fPIC -DPIC -o .libs/imgproc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -fPIC -DPIC -o .libs/trig_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -fPIC -DPIC -o .libs/cam_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -o trig.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -fPIC -DPIC -o .libs/io_dav.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -o cam.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -fPIC -DPIC -o .libs/imgproc_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -o trig_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -fPIC -DPIC -o .libs/img_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -fPIC -DPIC -o .libs/img.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -fPIC -DPIC -o .libs/io_hdf.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -fPIC -DPIC -o .libs/io_png.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -o cam_par.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo ../../lib/utils.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -fPIC -DPIC -o .libs/genpar.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -fPIC -DPIC -o .libs/io_raw.o /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 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../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_par.lo ../../lib/piv_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -fPIC -DPIC -o .libs/utils_alloc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -fPIC -DPIC -o .libs/utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -fPIC -DPIC -o .libs/piv.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -fPIC -DPIC -o .libs/piv_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -o imgproc_par.o >/dev/null 2>&1 ../../lib/io.c: In function 'gpiv_find_pivdata_origin': ../../lib/io.c:379:28: warning: comparison between pointer and zero character constant [-Wpointer-compare] 379 | if (strstr(line, "rr") != '\0') { | ^~ ../../lib/io.c:379:9: note: did you mean to dereference the pointer? 379 | if (strstr(line, "rr") != '\0') { | ^ ../../lib/io.c:381:38: warning: comparison between pointer and zero character constant [-Wpointer-compare] 381 | } else if (strstr(line, "DaVis") != '\0') { | ^~ ../../lib/io.c:381:16: note: did you mean to dereference the pointer? 381 | } else if (strstr(line, "DaVis") != '\0') { | ^ ../../lib/io.c: In function 'find_data_scaled': ../../lib/io.c:1201:30: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1201 | if (strstr(line,"scale") != '\0') { | ^~ ../../lib/io.c:1201:9: note: did you mean to dereference the pointer? 1201 | if (strstr(line,"scale") != '\0') { | ^ ../../lib/io.c: In function 'count_asciidata': ../../lib/io.c:1243:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 1243 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/io.c:1243:28: warning: comparison between pointer and integer 1243 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'read_pivdata_from_stdin': ../../lib/io.c:1579:27: warning: comparison between pointer and integer 1579 | while (gets (line[k]) != NULL) { | ^~ ../../lib/io.c: In function 'read_scdata_from_stdin': ../../lib/io.c:1671:27: warning: comparison between pointer and integer 1671 | while (gets (line[k]) != NULL) { | ^~ ../../lib/img.c: In function 'gpiv_img_read_header': ../../lib/img.c:939:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 939 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/img.c:939:28: warning: comparison between pointer and integer 939 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -o img_utils.o >/dev/null 2>&1 ../../lib/utils.c: In function 'gpiv_add_datetime_to_comment': ../../lib/utils.c:232:5: warning: 'g_date_set_time' is deprecated: Use 'g_date_set_time_t' instead [-Wdeprecated-declarations] 232 | g_date_set_time(gdate, time (NULL)); | ^~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:43, from ../../include/gpiv.h:202, from ../../lib/utils.c:51: /usr/include/glib-2.0/glib/gdate.h:203:14: note: declared here 203 | void g_date_set_time (GDate *date, | ^~~~~~~~~~~~~~~ ../../lib/utils.c:234:13: warning: Deprecated pre-processor symbol, replace with 234 | g_date_day (gdate), | ^ ~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:235:13: warning: Deprecated pre-processor symbol, replace with 235 | g_date_month (gdate), | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:236:13: warning: Deprecated pre-processor symbol, replace with 236 | g_date_year (gdate)); | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:247:36: warning: too many arguments for format [-Wformat-extra-args] 247 | comment = g_strdup_printf ("%s%s", cdate, ctime, NULL); | ^~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -o genpar.o >/dev/null 2>&1 ../../lib/utils.c: In function 'gpiv_scan_iph': ../../lib/utils.c:708:9: warning: writing into constant object (argument 3) [-Wformat=] 708 | sscanf (line, "%s %d", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_cph': ../../lib/utils.c:748:9: warning: writing into constant object (argument 3) [-Wformat=] 748 | sscanf (line, "%s %c", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_fph': ../../lib/utils.c:789:9: warning: writing into constant object (argument 3) [-Wformat=] 789 | sscanf (line, "%s %f", par_name, parameter); | ^~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -o io_dav.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -o io_raw.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -o io_png.o >/dev/null 2>&1 ../../lib/piv_par.c: In function 'gpiv_piv_read_parameters': ../../lib/piv_par.c:279:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 279 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/piv_par.c:279:28: warning: comparison between pointer and integer 279 | while (gets (line) != NULL) { | ^~ /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_utils.lo ../../lib/piv_utils.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -o utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -o imgproc.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -o imgproc_deform.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -o io_hdf.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -fPIC -DPIC -o .libs/piv_utils.o /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid.lo ../../lib/valid.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -o utils_alloc.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid_par.lo ../../lib/valid_par.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post.lo ../../lib/post.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_par.lo ../../lib/post_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -fPIC -DPIC -o .libs/post.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -fPIC -DPIC -o .libs/valid_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -fPIC -DPIC -o .libs/valid.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -fPIC -DPIC -o .libs/post_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -o io.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_utils.lo ../../lib/post_utils.c ../../lib/valid_par.c: In function 'gpiv_valid_read_parameters': ../../lib/valid_par.c:184:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 184 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/valid_par.c:184:28: warning: comparison between pointer and integer 184 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -o img.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o my_utils.lo ../../lib/my_utils.c ../../lib/piv_utils.c: In function 'gpiv_piv_gnuplot': ../../lib/piv_utils.c:581:47: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 581 | "gnuplot -bg %s -geometry %dx%d %s", | ^~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, 583 | fname_cmd); | ~~~~~~~~~ ../../lib/piv_utils.c:580:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 580 | snprintf (command, GPIV_MAX_CHARS, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 | "gnuplot -bg %s -geometry %dx%d %s", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 | fname_cmd); | ~~~~~~~~~~ ../../lib/post_par.c: In function 'gpiv_post_read_parameters': ../../lib/post_par.c:295:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 295 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/post_par.c:295:28: warning: comparison between pointer and integer 295 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -fPIC -DPIC -o .libs/post_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -o piv_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -fPIC -DPIC -o .libs/my_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -o piv_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -o valid_par.o >/dev/null 2>&1 ../../lib/my_utils.c: In function 'my_utils_fopen_tmp': ../../lib/my_utils.c:55:27: warning: implicit declaration of function 'g_mkdir'; did you mean 'rmdir'? [-Wimplicit-function-declaration] 55 | if ((return_val = g_mkdir(tmp_user_dir, 700)) != 0) { | ^~~~~~~ | rmdir libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -o post_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -o my_utils.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_scalar_gnuplot': ../../lib/post_utils.c:192:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:192:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../lib/post_utils.c: In function 'gpiv_histo_gnuplot': ../../lib/post_utils.c:539:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:539:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -o post_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -o valid.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -o post.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -o piv.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=link x86_64-linux-gnu-gcc -fopenmp -g -O2 -fdebug-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libgpiv.la -rpath /usr/lib/x86_64-linux-gnu genpar.lo cam.lo cam_par.lo trig.lo trig_par.lo img.lo img_utils.lo imgproc.lo imgproc_deform.lo imgproc_par.lo io.lo io_png.lo io_raw.lo io_hdf.lo io_dav.lo utils.lo utils_alloc.lo piv.lo piv_par.lo piv_utils.lo valid.lo valid_par.lo post.lo post_par.lo post_utils.lo my_utils.lo -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 libtool: link: x86_64-linux-gnu-gcc -shared -fPIC -DPIC .libs/genpar.o .libs/cam.o .libs/cam_par.o .libs/trig.o .libs/trig_par.o .libs/img.o .libs/img_utils.o .libs/imgproc.o .libs/imgproc_deform.o .libs/imgproc_par.o .libs/io.o .libs/io_png.o .libs/io_raw.o .libs/io_hdf.o .libs/io_dav.o .libs/utils.o .libs/utils_alloc.o .libs/piv.o .libs/piv_par.o .libs/piv_utils.o .libs/valid.o .libs/valid_par.o .libs/post.o .libs/post_par.o .libs/post_utils.o .libs/my_utils.o -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 -fopenmp -g -O2 -fstack-protector-strong -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -fopenmp -Wl,-soname -Wl,libgpiv.so.3 -o .libs/libgpiv.so.3.0.0 /usr/bin/ld: .libs/img.o: in function `gpiv_img_read_header': ./build-doc/lib/../../lib/img.c:939: warning: the `gets' function is dangerous and should not be used. libtool: link: (cd ".libs" && rm -f "libgpiv.so.3" && ln -s "libgpiv.so.3.0.0" "libgpiv.so.3") libtool: link: (cd ".libs" && rm -f "libgpiv.so" && ln -s "libgpiv.so.3.0.0" "libgpiv.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libgpiv.a genpar.o cam.o cam_par.o trig.o trig_par.o img.o img_utils.o imgproc.o imgproc_deform.o imgproc_par.o io.o io_png.o io_raw.o io_hdf.o io_dav.o utils.o utils_alloc.o piv.o piv_par.o piv_utils.o valid.o valid_par.o post.o post_par.o post_utils.o my_utils.o libtool: link: x86_64-linux-gnu-ranlib .libs/libgpiv.a libtool: link: ( cd ".libs" && rm -f "libgpiv.la" && ln -s "../libgpiv.la" "libgpiv.la" ) make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc/lib' Making check in include make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc/include' Making check in gpiv make[3]: Entering directory '/build/libgpiv-0.6.1/build-doc/include/gpiv' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-doc/include/gpiv' make[3]: Entering directory '/build/libgpiv-0.6.1/build-doc/include' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-doc/include' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc/include' make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1/build-doc' create-stamp debian/debhelper-build-stamp dh build --builddirectory=build-serial dh_update_autotools_config -O--builddirectory=build-serial dh_autoreconf -O--builddirectory=build-serial dh_autoreconf: warning: Only runs once, see dh-autoreconf(7) debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-serial -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-serial && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether 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(cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== dh_auto_configure --builddirectory=build-mpi -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi cd build-mpi && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes configure: WARNING: "libmpi HAS BEEN installed" checking for main in -lmpi... yes checking mpi.h usability... yes checking mpi.h presence... no configure: WARNING: mpi.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: mpi.h: proceeding with the compiler's result checking for mpi.h... yes checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Message Passing Interface (MPI) for processing on distributed memory systems building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-doc -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-doc && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_build --builddirectory=build-serial cd build-serial && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_build --builddirectory=build-mpi cd build-mpi && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/libgpiv-0.6.1' /usr/bin/make -C build-doc/ doxygen-doc make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' make[2]: Nothing to be done for 'doxygen-doc'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_auto_test -O--builddirectory=build-serial cd build-serial && make -j15 check VERBOSE=1 make[1]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making check in lib make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making check in include make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making check in gpiv make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[1]: Leaving directory '/build/libgpiv-0.6.1/build-serial' create-stamp debian/debhelper-build-stamp dh build --builddirectory=build-mpi dh_update_autotools_config -O--builddirectory=build-mpi dh_autoreconf -O--builddirectory=build-mpi dh_autoreconf: warning: Only runs once, see dh-autoreconf(7) debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-serial -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-serial && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== dh_auto_configure --builddirectory=build-mpi -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi cd build-mpi && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes configure: WARNING: "libmpi HAS BEEN installed" checking for main in -lmpi... yes checking mpi.h usability... yes checking mpi.h presence... no configure: WARNING: mpi.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: mpi.h: proceeding with the compiler's result checking for mpi.h... yes checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Message Passing Interface (MPI) for processing on distributed memory systems building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-doc -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-doc && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking omp.h usability... yes checking omp.h presence... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking png.h usability... yes checking png.h presence... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_build --builddirectory=build-serial cd build-serial && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_build --builddirectory=build-mpi cd build-mpi && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/libgpiv-0.6.1' /usr/bin/make -C build-doc/ doxygen-doc make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' make[2]: Nothing to be done for 'doxygen-doc'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_auto_test -O--builddirectory=build-mpi cd build-mpi && make -j15 check VERBOSE=1 make[1]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making check in lib make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making check in include make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making check in gpiv make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --builddirectory=build-doc dh_testroot -O--builddirectory=build-doc dh_prep -O--builddirectory=build-doc debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_install --builddirectory=build-serial cd build-serial && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libgpiv.la '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so.3 || { rm -f libgpiv.so.3 && ln -s libgpiv.so.3.0.0 libgpiv.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so || { rm -f libgpiv.so && ln -s libgpiv.so.3.0.0 libgpiv.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv.lai /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.la libtool: install: /usr/bin/install -c .libs/libgpiv.a /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_install --builddirectory=build-mpi --destdir=/build/libgpiv-0.6.1/debian/tmp-mpi cd build-mpi && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp-mpi AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libgpiv_mpi.la '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3 || { rm -f libgpiv_mpi.so.3 && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so || { rm -f libgpiv_mpi.so && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.lai /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.la libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.a /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/libgpiv-0.6.1' install -d /build/libgpiv-0.6.1/debian/usr/share/doc/libgpiv3-doc/html find build-doc/doxygen-doc/html/ -type f ! -name '*.md5' -exec \ install -D '{}' -t "/build/libgpiv-0.6.1/debian/tmp/usr/share/doc/libgpiv3-doc/html/" \; #/usr/bin/make -C build-doc/ doxygen-install make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_install -O--builddirectory=build-doc dh_installdocs -O--builddirectory=build-doc dh_installchangelogs -O--builddirectory=build-doc dh_systemd_enable -O--builddirectory=build-doc dh_installinit -O--builddirectory=build-doc dh_systemd_start -O--builddirectory=build-doc dh_perl -O--builddirectory=build-doc dh_link -O--builddirectory=build-doc dh_strip_nondeterminism -O--builddirectory=build-doc dh_compress -O--builddirectory=build-doc dh_fixperms -O--builddirectory=build-doc dh_missing -O--builddirectory=build-doc debian/rules override_dh_strip make[1]: Entering directory '/build/libgpiv-0.6.1' dh_strip --dbgsym-migration='libgpiv3-dbg (<<0.6.1-5~)' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_makeshlibs -O--builddirectory=build-doc dh_shlibdeps -O--builddirectory=build-doc dh_installdeb -O--builddirectory=build-doc dh_gencontrol -O--builddirectory=build-doc dpkg-gencontrol: warning: Depends field of package libgpiv3-common: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--builddirectory=build-doc dh_builddeb -O--builddirectory=build-doc dpkg-deb: building package 'libgpiv3-common' in '../libgpiv3-common_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3' in '../libgpiv3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dbgsym' in '../libgpiv3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dev' in '../libgpiv3-dev_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-doc' in '../libgpiv3-doc_0.6.1-7.1_all.deb'. dpkg-deb: building package 'libgpiv-mpi3' in '../libgpiv-mpi3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3-dbgsym' in '../libgpiv-mpi3-dbgsym_0.6.1-7.1_amd64.deb'. dh binary --builddirectory=build-serial dh_testroot -O--builddirectory=build-serial dh_prep -O--builddirectory=build-serial debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_install --builddirectory=build-serial cd build-serial && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libgpiv.la '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so.3 || { rm -f libgpiv.so.3 && ln -s libgpiv.so.3.0.0 libgpiv.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so || { rm -f libgpiv.so && ln -s libgpiv.so.3.0.0 libgpiv.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv.lai /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.la libtool: install: /usr/bin/install -c .libs/libgpiv.a /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_install --builddirectory=build-mpi --destdir=/build/libgpiv-0.6.1/debian/tmp-mpi cd build-mpi && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp-mpi AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libgpiv_mpi.la '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3 || { rm -f libgpiv_mpi.so.3 && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so || { rm -f libgpiv_mpi.so && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.lai /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.la libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.a /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/libgpiv-0.6.1' install -d /build/libgpiv-0.6.1/debian/usr/share/doc/libgpiv3-doc/html find build-doc/doxygen-doc/html/ -type f ! -name '*.md5' -exec \ install -D '{}' -t "/build/libgpiv-0.6.1/debian/tmp/usr/share/doc/libgpiv3-doc/html/" \; #/usr/bin/make -C build-doc/ doxygen-install make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_install -O--builddirectory=build-serial dh_installdocs -O--builddirectory=build-serial dh_installchangelogs -O--builddirectory=build-serial dh_systemd_enable -O--builddirectory=build-serial dh_installinit -O--builddirectory=build-serial dh_systemd_start -O--builddirectory=build-serial dh_perl -O--builddirectory=build-serial dh_link -O--builddirectory=build-serial dh_strip_nondeterminism -O--builddirectory=build-serial dh_compress -O--builddirectory=build-serial dh_fixperms -O--builddirectory=build-serial dh_missing -O--builddirectory=build-serial debian/rules override_dh_strip make[1]: Entering directory '/build/libgpiv-0.6.1' dh_strip --dbgsym-migration='libgpiv3-dbg (<<0.6.1-5~)' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_makeshlibs -O--builddirectory=build-serial dh_shlibdeps -O--builddirectory=build-serial dh_installdeb -O--builddirectory=build-serial dh_gencontrol -O--builddirectory=build-serial dpkg-gencontrol: warning: Depends field of package libgpiv3-common: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--builddirectory=build-serial dh_builddeb -O--builddirectory=build-serial dpkg-deb: building package 'libgpiv3' in '../libgpiv3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dbgsym' in '../libgpiv3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-common' in '../libgpiv3-common_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3-dbgsym' in '../libgpiv-mpi3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-doc' in '../libgpiv3-doc_0.6.1-7.1_all.deb'. dpkg-deb: building package 'libgpiv3-dev' in '../libgpiv3-dev_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3' in '../libgpiv-mpi3_0.6.1-7.1_amd64.deb'. dh binary --builddirectory=build-mpi dh_testroot -O--builddirectory=build-mpi dh_prep -O--builddirectory=build-mpi debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_install --builddirectory=build-serial cd build-serial && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libgpiv.la '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so.3 || { rm -f libgpiv.so.3 && ln -s libgpiv.so.3.0.0 libgpiv.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so || { rm -f libgpiv.so && ln -s libgpiv.so.3.0.0 libgpiv.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv.lai /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.la libtool: install: /usr/bin/install -c .libs/libgpiv.a /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_install --builddirectory=build-mpi --destdir=/build/libgpiv-0.6.1/debian/tmp-mpi cd build-mpi && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp-mpi AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libgpiv_mpi.la '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3 || { rm -f libgpiv_mpi.so.3 && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so || { rm -f libgpiv_mpi.so && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.lai /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.la libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.a /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/libgpiv-0.6.1' install -d /build/libgpiv-0.6.1/debian/usr/share/doc/libgpiv3-doc/html find build-doc/doxygen-doc/html/ -type f ! -name '*.md5' -exec \ install -D '{}' -t "/build/libgpiv-0.6.1/debian/tmp/usr/share/doc/libgpiv3-doc/html/" \; #/usr/bin/make -C build-doc/ doxygen-install make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_install -O--builddirectory=build-mpi dh_installdocs -O--builddirectory=build-mpi dh_installchangelogs -O--builddirectory=build-mpi dh_systemd_enable -O--builddirectory=build-mpi dh_installinit -O--builddirectory=build-mpi dh_systemd_start -O--builddirectory=build-mpi dh_perl -O--builddirectory=build-mpi dh_link -O--builddirectory=build-mpi dh_strip_nondeterminism -O--builddirectory=build-mpi dh_compress -O--builddirectory=build-mpi dh_fixperms -O--builddirectory=build-mpi dh_missing -O--builddirectory=build-mpi debian/rules override_dh_strip make[1]: Entering directory '/build/libgpiv-0.6.1' dh_strip --dbgsym-migration='libgpiv3-dbg (<<0.6.1-5~)' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_makeshlibs -O--builddirectory=build-mpi dh_shlibdeps -O--builddirectory=build-mpi dh_installdeb -O--builddirectory=build-mpi dh_gencontrol -O--builddirectory=build-mpi dpkg-gencontrol: warning: Depends field of package libgpiv3-common: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--builddirectory=build-mpi dh_builddeb -O--builddirectory=build-mpi dpkg-deb: building package 'libgpiv3-dbgsym' in '../libgpiv3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-common' in '../libgpiv3-common_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-doc' in '../libgpiv3-doc_0.6.1-7.1_all.deb'. dpkg-deb: building package 'libgpiv3-dev' in '../libgpiv3-dev_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3' in '../libgpiv3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3' in '../libgpiv-mpi3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3-dbgsym' in '../libgpiv-mpi3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libgpiv_0.6.1-7.1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2086125/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2086125/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2086125 and its subdirectories I: Current time: Fri Oct 15 04:39:02 +14 2021 I: pbuilder-time-stamp: 1634222342