I: pbuilder: network access will be disabled during build I: Current time: Fri Oct 29 10:03:35 +14 2021 I: pbuilder-time-stamp: 1635451415 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [quorum_1.1.1-4.dsc] I: copying [./quorum_1.1.1.orig.tar.gz] I: copying [./quorum_1.1.1-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.eTXxwbWr/trustedkeys.kbx': General error gpgv: Signature made Sun Nov 29 11:15:16 2020 +14 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./quorum_1.1.1-4.dsc dpkg-source: info: extracting quorum in quorum-1.1.1 dpkg-source: info: unpacking quorum_1.1.1.orig.tar.gz dpkg-source: info: unpacking quorum_1.1.1-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3534954/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3534954/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3534954/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=0a353e87f9d94d4dad748d96f69edce9 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3534954 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.QObLNw2h0q/pbuilderrc_fKIn --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.QObLNw2h0q/b2 --logfile b2/build.log quorum_1.1.1-4.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Aug 5 10:25 bash -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash -rwxr-xr-x 1 root root 113664 Sep 24 2020 date -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd -rwxr-xr-x 1 root root 93936 Sep 24 2020 df -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir -rwxr-xr-x 1 root root 84440 Jul 29 09:09 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 24 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 69032 Jul 29 09:09 findmnt -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe -rwxr-xr-x 1 root root 98048 Mar 3 2021 gzip -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln -rwxr-xr-x 1 root root 56952 Feb 8 2020 login -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls -rwxr-xr-x 1 root root 149736 Jul 29 09:09 lsblk -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp -rwxr-xr-x 1 root root 59632 Jul 29 09:09 more -rwsr-xr-x 1 root root 55528 Jul 29 09:09 mount -rwxr-xr-x 1 root root 18664 Jul 29 09:09 mountpoint -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd lrwxrwxrwx 1 root root 4 Aug 5 10:25 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Oct 29 10:03 sh -> bash lrwxrwxrwx 1 root root 4 Oct 22 01:41 sh.distrib -> dash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jul 29 09:09 su -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch -rwxr-xr-x 1 root root 39680 Sep 24 2020 true -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jul 29 09:09 umount -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir -rwxr-xr-x 1 root root 63744 Jul 29 09:09 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew I: user script /srv/workspace/pbuilder/3534954/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libjellyfish-2.0-dev (>= 2.2.6-1~), jellyfish (>= 2.2.6-1~), yaggo, pkg-config dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libjellyfish-2.0-dev (>= 2.2.6-1~); however: Package libjellyfish-2.0-dev is not installed. pbuilder-satisfydepends-dummy depends on jellyfish (>= 2.2.6-1~); however: Package jellyfish is not installed. pbuilder-satisfydepends-dummy depends on yaggo; however: Package yaggo is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} jellyfish{a} libarchive-zip-perl{a} libbrotli1{a} libbsd0{a} libcurl3-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libhts3{a} libicu67{a} libjellyfish-2.0-2{a} libjellyfish-2.0-dev{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} librtmp1{a} libruby2.7{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} libyaml-0-2{a} m4{a} man-db{a} openssl{a} pkg-config{a} po-debconf{a} rake{a} ruby{a} ruby-minitest{a} ruby-net-telnet{a} ruby-power-assert{a} ruby-rubygems{a} ruby-test-unit{a} ruby-xmlrpc{a} ruby2.7{a} rubygems-integration{a} sensible-utils{a} yaggo{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-lato libarchive-cpio-perl libglib2.0-data libjs-jquery libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix shared-mime-info wget xdg-user-dirs zip 0 packages upgraded, 65 newly installed, 0 to remove and 0 not upgraded. Need to get 29.4 MB of archives. After unpacking 103 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1k-1+deb11u1 [851 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20210119 [158 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1 [69.1 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1 [106 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3 [232 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.9.0-2 [156 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 libcurl3-gnutls amd64 7.74.0-1.3+b1 [338 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 libhts3 amd64 1.11-4 [378 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 libjellyfish-2.0-2 amd64 2.3.0-10 [65.1 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 jellyfish amd64 2.3.0-10 [790 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 libedit2 amd64 3.1-20191231-2+b1 [96.7 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.8-1 [1370 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 libjellyfish-2.0-dev amd64 2.3.0-10 [138 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 rubygems-integration all 1.18 [6704 B] Get: 53 http://deb.debian.org/debian bullseye/main amd64 ruby2.7 amd64 2.7.4-1 [747 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 ruby-rubygems all 3.2.5-2 [281 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 ruby amd64 1:2.7+2 [11.7 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 rake all 13.0.3-1 [84.7 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 ruby-minitest all 5.13.0-1 [57.3 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 ruby-net-telnet all 0.1.1-2 [12.5 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 ruby-power-assert all 1.1.7-2 [11.5 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 ruby-test-unit all 3.3.9-1 [86.1 kB] Get: 61 http://deb.debian.org/debian bullseye/main amd64 ruby-xmlrpc all 0.3.0-2 [23.7 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libruby2.7 amd64 2.7.4-1 [4200 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 yaggo all 1.5.10-2 [18.9 kB] Fetched 29.4 MB in 1s (32.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8_amd64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package openssl. Preparing to unpack .../06-openssl_1.1.1k-1+deb11u1_amd64.deb ... Unpacking openssl (1.1.1k-1+deb11u1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../07-ca-certificates_20210119_all.deb ... Unpacking ca-certificates (20210119) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../08-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... 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Setting up ruby-minitest (5.13.0-1) ... Setting up libjellyfish-2.0-2:amd64 (2.3.0-10) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up ruby-test-unit (3.3.9-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up ruby-net-telnet (0.1.1-2) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up pkg-config (0.29.2-1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1) ... Setting up libmd0:amd64 (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:amd64 (1.9.0-2) ... Setting up openssl (1.1.1k-1+deb11u1) ... Setting up libbsd0:amd64 (0.11.3-1) ... Setting up libelf1:amd64 (0.183-1) ... Setting up ruby-xmlrpc (0.3.0-2) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libjellyfish-2.0-dev:amd64 (2.3.0-10) ... Setting up libtool (2.4.6-15) ... Setting up libedit2:amd64 (3.1-20191231-2+b1) ... Setting up libldap-2.4-2:amd64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up libcurl3-gnutls:amd64 (7.74.0-1.3+b1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libhts3:amd64 (1.11-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up rubygems-integration (1.18) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up jellyfish (2.3.0-10) ... Setting up debhelper (13.3.4) ... Setting up rake (13.0.3-1) ... Setting up ruby-rubygems (3.2.5-2) ... Setting up libruby2.7:amd64 (2.7.4-1) ... Setting up ruby2.7 (2.7.4-1) ... Setting up ruby (1:2.7+2) ... Setting up yaggo (1.5.10-2) ... Processing triggers for libc-bin (2.31-13+deb11u2) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package hostname: Name or service not known I: Running cd /build/quorum-1.1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../quorum_1.1.1-4_source.changes dpkg-buildpackage: info: source package quorum dpkg-buildpackage: info: source version 1.1.1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --no-parallel dh_autoreconf_clean -O--no-parallel dh_clean -O--no-parallel debian/rules binary dh binary --no-parallel dh_update_autotools_config -O--no-parallel dh_autoreconf -O--no-parallel libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:10: installing 'build-aux/compile' configure.ac:10: installing 'build-aux/config.guess' configure.ac:10: installing 'build-aux/config.sub' configure.ac:6: installing 'build-aux/install-sh' configure.ac:6: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' parallel-tests: installing 'build-aux/test-driver' dh_auto_configure -O--no-parallel ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for pthread_create in -lpthread... yes checking for clock_gettime in -lrt... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for yaggo... /usr/bin/yaggo checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for jellyfish-2.0... yes checking for jellyfish... /usr/bin/jellyfish checking for __int128... yes checking whether strerror_r is declared... yes checking for strerror_r... yes checking whether strerror_r returns char *... yes checking for stdbool.h that conforms to C99... no checking for _Bool... no checking for size_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for dummy... no checking for jellyfish... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -O--no-parallel make -j1 make[1]: Entering directory '/build/quorum-1.1.1' yaggo src/error_correct_reads_cmdline.yaggo src/error_correct_reads_cmdline.hpp /usr/bin/yaggo --license ./header-license -o src/error_correct_reads_cmdline.hpp src/error_correct_reads_cmdline.yaggo yaggo src/create_database_cmdline.yaggo src/create_database_cmdline.hpp /usr/bin/yaggo --license ./header-license -o src/create_database_cmdline.hpp src/create_database_cmdline.yaggo yaggo src/merge_mate_pairs_cmdline.yaggo src/merge_mate_pairs_cmdline.hpp /usr/bin/yaggo --license ./header-license -o src/merge_mate_pairs_cmdline.hpp src/merge_mate_pairs_cmdline.yaggo yaggo src/split_mate_pairs_cmdline.yaggo src/split_mate_pairs_cmdline.hpp /usr/bin/yaggo --license ./header-license -o src/split_mate_pairs_cmdline.hpp src/split_mate_pairs_cmdline.yaggo make all-am make[2]: Entering directory '/build/quorum-1.1.1' g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o src/error_correct_reads.o src/error_correct_reads.cc g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o src/err_log.o src/err_log.cc /bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o quorum_error_correct_reads src/error_correct_reads.o src/err_log.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o quorum_error_correct_reads src/error_correct_reads.o src/err_log.o /usr/lib/x86_64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o src/create_database.o src/create_database.cc /bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o quorum_create_database src/create_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o quorum_create_database src/create_database.o /usr/lib/x86_64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o src/merge_mate_pairs.o src/merge_mate_pairs.cc /bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o merge_mate_pairs src/merge_mate_pairs.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o merge_mate_pairs src/merge_mate_pairs.o /usr/lib/x86_64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o src/split_mate_pairs.o src/split_mate_pairs.cc /bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o split_mate_pairs src/split_mate_pairs.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o split_mate_pairs src/split_mate_pairs.o /usr/lib/x86_64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread sed -e 's|[@]JELLYFISH[@]|/usr/bin/jellyfish|g' -e 's|[@]bindir[@]|/build/quorum-1.1.1|g' -e 's|[@]JF_LIB_PATH[@]||g' -e 's|[@]PACKAGE_VERSION[@]|1.1.1|g' -e 's|[@]JELLYFISH_VERSION[@]|2.3.0|g' < src/quorum.in > quorum && chmod a+x quorum mkdir -p data; /usr/bin/jellyfish count -m 24 -s 5k -C -t 10 -o data/adapter.jf data/adapter.fa make[2]: Leaving directory '/build/quorum-1.1.1' make[1]: Leaving directory '/build/quorum-1.1.1' dh_auto_test -O--no-parallel make -j1 check VERBOSE=1 make[1]: Entering directory '/build/quorum-1.1.1' make check-am make[2]: Entering directory '/build/quorum-1.1.1' make all_tests query_mer_database histo_mer_database libgtest.la libgtest_main.la make[3]: Entering directory '/build/quorum-1.1.1' g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -I./unit_tests/gtest/include -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/all_tests-test_mer_database.o `test -f 'unit_tests/test_mer_database.cc' || echo './'`unit_tests/test_mer_database.cc /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/gtest/src/libgtest_main_la-gtest_main.lo `test -f 'unit_tests/gtest/src/gtest_main.cc' || echo './'`unit_tests/gtest/src/gtest_main.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest_main.cc -fPIC -DPIC -o unit_tests/gtest/src/.libs/libgtest_main_la-gtest_main.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest_main.cc -o unit_tests/gtest/src/libgtest_main_la-gtest_main.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o unit_tests/gtest/src/libgtest_la-gtest-all.lo `test -f 'unit_tests/gtest/src/gtest-all.cc' || echo './'`unit_tests/gtest/src/gtest-all.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest-all.cc -fPIC -DPIC -o unit_tests/gtest/src/.libs/libgtest_la-gtest-all.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c unit_tests/gtest/src/gtest-all.cc -o unit_tests/gtest/src/libgtest_la-gtest-all.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CXX --mode=link g++ -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o libgtest.la unit_tests/gtest/src/libgtest_la-gtest-all.lo -lrt -lpthread libtool: link: ar cr .libs/libgtest.a unit_tests/gtest/src/.libs/libgtest_la-gtest-all.o libtool: link: ranlib .libs/libgtest.a libtool: link: ( cd ".libs" && rm -f "libgtest.la" && ln -s "../libgtest.la" "libgtest.la" ) /bin/sh ./libtool --tag=CXX --mode=link g++ -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o libgtest_main.la unit_tests/gtest/src/libgtest_main_la-gtest_main.lo libgtest.la -lrt -lpthread libtool: link: (cd .libs/libgtest_main.lax/libgtest.a && ar x "/build/quorum-1.1.1/./.libs/libgtest.a") libtool: link: ar cr .libs/libgtest_main.a unit_tests/gtest/src/.libs/libgtest_main_la-gtest_main.o .libs/libgtest_main.lax/libgtest.a/libgtest_la-gtest-all.o libtool: link: ranlib .libs/libgtest_main.a libtool: link: rm -fr .libs/libgtest_main.lax libtool: link: ( cd ".libs" && rm -f "libgtest_main.la" && ln -s "../libgtest_main.la" "libgtest_main.la" ) /bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -I./unit_tests/gtest/include -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o all_tests unit_tests/all_tests-test_mer_database.o libgtest_main.la -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -I./unit_tests/gtest/include -I./unit_tests -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o all_tests unit_tests/all_tests-test_mer_database.o ./.libs/libgtest_main.a /usr/lib/x86_64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o src/query_mer_database.o src/query_mer_database.cc /bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o query_mer_database src/query_mer_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o query_mer_database src/query_mer_database.o /usr/lib/x86_64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread g++ -DHAVE_CONFIG_H -I. -I./include -I. -I/usr/include/jellyfish-2.3.0 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -c -o src/histo_mer_database.o src/histo_mer_database.cc /bin/sh ./libtool --tag=CXX --mode=link g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z,relro -Wl,-z,now -o histo_mer_database src/histo_mer_database.o -ljellyfish-2.0 -lpthread -lrt -lpthread libtool: link: g++ -Wall -g -O2 -std=c++0x -Werror -g -O2 -fdebug-prefix-map=/build/quorum-1.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_NUMERIC_LIMITS128 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o histo_mer_database src/histo_mer_database.o /usr/lib/x86_64-linux-gnu/libjellyfish-2.0.so -lrt -lpthread make[3]: 'libgtest.la' is up to date. make[3]: 'libgtest_main.la' is up to date. make[3]: Leaving directory '/build/quorum-1.1.1' make check-TESTS make[3]: Entering directory '/build/quorum-1.1.1' make[4]: Entering directory '/build/quorum-1.1.1' PASS: all_tests ============================================================================ Testsuite summary for quorum 1.1.1 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/build/quorum-1.1.1' make[3]: Leaving directory '/build/quorum-1.1.1' make[2]: Leaving directory '/build/quorum-1.1.1' make[1]: Leaving directory '/build/quorum-1.1.1' create-stamp debian/debhelper-build-stamp dh_testroot -O--no-parallel dh_prep -O--no-parallel dh_auto_install -O--no-parallel make -j1 install DESTDIR=/build/quorum-1.1.1/debian/quorum AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/quorum-1.1.1' make install-am make[2]: Entering directory '/build/quorum-1.1.1' make[3]: Entering directory '/build/quorum-1.1.1' /bin/mkdir -p '/build/quorum-1.1.1/debian/quorum/usr/bin' /bin/sh ./libtool --mode=install /usr/bin/install -c quorum_error_correct_reads quorum_create_database merge_mate_pairs split_mate_pairs '/build/quorum-1.1.1/debian/quorum/usr/bin' libtool: install: /usr/bin/install -c quorum_error_correct_reads /build/quorum-1.1.1/debian/quorum/usr/bin/quorum_error_correct_reads libtool: install: /usr/bin/install -c quorum_create_database /build/quorum-1.1.1/debian/quorum/usr/bin/quorum_create_database libtool: install: /usr/bin/install -c merge_mate_pairs /build/quorum-1.1.1/debian/quorum/usr/bin/merge_mate_pairs libtool: install: /usr/bin/install -c split_mate_pairs /build/quorum-1.1.1/debian/quorum/usr/bin/split_mate_pairs /bin/mkdir -p '/build/quorum-1.1.1/debian/quorum/usr/bin' /usr/bin/install -c .libs/quorum '/build/quorum-1.1.1/debian/quorum/usr/bin' /bin/mkdir -p '/build/quorum-1.1.1/debian/quorum/usr/share' /usr/bin/install -c -m 644 data/adapter.jf '/build/quorum-1.1.1/debian/quorum/usr/share' make[3]: Leaving directory '/build/quorum-1.1.1' make[2]: Leaving directory '/build/quorum-1.1.1' make[1]: Leaving directory '/build/quorum-1.1.1' debian/rules override_dh_install make[1]: Entering directory '/build/quorum-1.1.1' dh_install mkdir -p debian/quorum/usr/share/quorum mv debian/quorum/usr/share/adapter* debian/quorum/usr/share/quorum sed -i '1s+#! */usr/bin/env perl+#!/usr/bin/perl+' debian/*/usr/bin/* make[1]: Leaving directory '/build/quorum-1.1.1' dh_installdocs -O--no-parallel dh_installchangelogs -O--no-parallel dh_installman -O--no-parallel dh_installsystemduser -O--no-parallel dh_perl -O--no-parallel dh_link -O--no-parallel dh_strip_nondeterminism -O--no-parallel dh_compress -O--no-parallel dh_fixperms -O--no-parallel dh_missing -O--no-parallel dh_dwz -a -O--no-parallel dh_strip -a -O--no-parallel dh_makeshlibs -a -O--no-parallel dh_shlibdeps -a -O--no-parallel dh_installdeb -O--no-parallel dh_gencontrol -O--no-parallel dpkg-gencontrol: warning: package quorum: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package quorum: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -O--no-parallel dh_builddeb -O--no-parallel dpkg-deb: building package 'quorum-dbgsym' in '../quorum-dbgsym_1.1.1-4_amd64.deb'. dpkg-deb: building package 'quorum' in '../quorum_1.1.1-4_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../quorum_1.1.1-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3534954/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3534954/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3534954 and its subdirectories I: Current time: Fri Oct 29 10:06:02 +14 2021 I: pbuilder-time-stamp: 1635451562