I: pbuilder: network access will be disabled during build I: Current time: Tue Sep 7 16:36:43 +14 2021 I: pbuilder-time-stamp: 1630982203 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [meep-openmpi_1.17.1-2.dsc] I: copying [./meep-openmpi_1.17.1.orig.tar.gz] I: copying [./meep-openmpi_1.17.1-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.Mpmiprg9/trustedkeys.kbx': General error gpgv: Signature made Wed Feb 3 13:18:48 2021 +14 gpgv: using RSA key 6201FBFFDBBDE07822EABB9696FCAC0D387B5847 gpgv: issuer "debian@alteholz.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./meep-openmpi_1.17.1-2.dsc dpkg-source: info: extracting meep-openmpi in meep-openmpi-1.17.1 dpkg-source: info: unpacking meep-openmpi_1.17.1.orig.tar.gz dpkg-source: info: unpacking meep-openmpi_1.17.1-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/31785/tmp/hooks/D01_modify_environment starting debug: Running on codethink14-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/31785/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/31785/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/var/lib/jenkins HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=31785 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.23f4oOGUIA/pbuilderrc_p8sD --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.23f4oOGUIA/b2 --logfile b2/build.log meep-openmpi_1.17.1-2.dsc' SUDO_GID=117 SUDO_UID=110 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root USERNAME=root _='I: set' http_proxy=http://192.168.101.16:3128 I: uname -a Linux i-capture-the-hostname 4.15.0-154-generic #161-Ubuntu SMP Fri Jul 30 13:01:15 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Aug 5 10:25 bash -rwxr-xr-x 3 root root 34808 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 23 2020 cat -rwxr-xr-x 1 root root 64512 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 23 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 23 2020 chown -rwxr-xr-x 1 root root 138896 Sep 23 2020 cp -rwxr-xr-x 1 root root 129544 Dec 11 2020 dash -rwxr-xr-x 1 root root 101384 Sep 23 2020 date -rwxr-xr-x 1 root root 80984 Sep 23 2020 dd -rwxr-xr-x 1 root root 89824 Sep 23 2020 df -rwxr-xr-x 1 root root 143088 Sep 23 2020 dir -rwxr-xr-x 1 root root 76152 Jul 29 09:09 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 64856 Jul 29 09:09 findmnt -rwsr-xr-x 1 root root 34824 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 178400 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe -rwxr-xr-x 1 root root 93744 Mar 3 2021 gzip -rwxr-xr-x 1 root root 18440 Nov 8 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 23 2020 ln -rwxr-xr-x 1 root root 52720 Feb 8 2020 login -rwxr-xr-x 1 root root 143088 Sep 23 2020 ls -rwxr-xr-x 1 root root 161960 Jul 29 09:09 lsblk -rwxr-xr-x 1 root root 85200 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 23 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 51368 Jul 29 09:09 more -rwsr-xr-x 1 root root 51360 Jul 29 09:09 mount -rwxr-xr-x 1 root root 14496 Jul 29 09:09 mountpoint -rwxr-xr-x 1 root root 134808 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Aug 5 10:25 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 23 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 23 2020 rm -rwxr-xr-x 1 root root 43880 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Sep 7 16:36 sh -> bash lrwxrwxrwx 1 root root 4 Aug 21 23:24 sh.distrib -> dash -rwxr-xr-x 1 root root 35656 Sep 23 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 23 2020 stty -rwsr-xr-x 1 root root 67776 Jul 29 09:09 su -rwxr-xr-x 1 root root 35672 Sep 23 2020 sync -rwxr-xr-x 1 root root 535768 Feb 17 2021 tar -rwxr-xr-x 1 root root 10568 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 23 2020 touch -rwxr-xr-x 1 root root 31512 Sep 23 2020 true -rwxr-xr-x 1 root root 14264 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 30880 Jul 29 09:09 umount -rwxr-xr-x 1 root root 35640 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress -rwxr-xr-x 1 root root 143088 Sep 23 2020 vdir -rwxr-xr-x 1 root root 59584 Jul 29 09:09 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew I: user script /srv/workspace/pbuilder/31785/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: gfortran, debhelper-compat (= 12), libctl-dev (>= 4.5.0-8), pkg-config, libharminv-dev (>= 1.4.1), zlib1g-dev, libfftw3-dev, libhdf5-openmpi-dev, libgsl-dev, liblapack-dev, libopenmpi-dev, libblas-dev, chrpath, swig, python3-dev, python3-numpy, python3-h5py, openmpi-bin, libgdsii-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libctl-dev (>= 4.5.0-8); however: Package libctl-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libharminv-dev (>= 1.4.1); however: Package libharminv-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-openmpi-dev; however: Package libhdf5-openmpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libopenmpi-dev; however: Package libopenmpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on swig; however: Package swig is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on openmpi-bin; however: Package openmpi-bin is not installed. pbuilder-satisfydepends-dummy depends on libgdsii-dev; however: Package libgdsii-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} guile-2.2{a} guile-2.2-dev{a} guile-2.2-libs{a} guile-3.0-libs{a} ibverbs-providers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libbsd0{a} libcbor0{a} libctl-dev{a} libctl7{a} libdebhelper-perl{a} libedit2{a} libelf1{a} libevent-2.1-7{a} libevent-core-2.1-7{a} libevent-dev{a} libevent-extra-2.1-7{a} libevent-openssl-2.1-7{a} libevent-pthreads-2.1-7{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgc-dev{a} libgc1{a} libgdsii-dev{a} libgdsii0{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgsl-dev{a} libgsl25{a} libgslcblas0{a} libharminv-dev{a} libharminv3{a} libhdf5-103-1{a} libhdf5-hl-100{a} libhdf5-openmpi-103-1{a} libhdf5-openmpi-cpp-103-1{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102{a} libhdf5-openmpi-hl-100{a} libhdf5-openmpi-hl-cpp-100{a} libhdf5-openmpi-hl-fortran-100{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack-dev{a} liblapack3{a} libltdl-dev{a} libltdl7{a} liblzf1{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmpdec3{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpipeline1{a} libpmix-dev{a} libpmix2{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} librdmacm1{a} libreadline-dev{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libucx0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} m4{a} man-db{a} media-types{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} po-debconf{a} python3{a} python3-dev{a} python3-distutils{a} python3-h5py{a} python3-h5py-serial{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3-six{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} swig{a} swig4.0{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libcoarrays-openmpi-dev libctl-doc libglib2.0-data libgpm2 libmail-sendmail-perl lynx shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 160 newly installed, 0 to remove and 0 not upgraded. Need to get 88.1 MB of archives. After unpacking 425 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-8 [142 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-minimal arm64 3.9.2-1 [797 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 python3.9-minimal arm64 3.9.2-1 [1884 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 python3-minimal arm64 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmpdec3 arm64 2.5.1-1 [84.4 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-stdlib arm64 3.9.2-1 [1658 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 python3.9 arm64 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 libpython3-stdlib arm64 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 python3 arm64 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libmd0 arm64 1.0.3-3 [27.9 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 libbsd0 arm64 0.11.3-1 [106 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 libedit2 arm64 3.1-20191231-2+b1 [92.1 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libcbor0 arm64 0.5.0+dfsg-2 [20.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libfido2-1 arm64 1.6.0-2 [50.2 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 openssh-client arm64 1:8.4p1-5 [892 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 chrpath arm64 0.16-2+b1 [16.0 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libgfortran-10-dev arm64 10.2.1-6 [388 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 gfortran-10 arm64 10.2.1-6 [8654 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 gfortran arm64 4:10.2.1-1 [1424 B] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libgc1 arm64 1:8.0.4-3 [232 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libltdl7 arm64 2.4.6-15 [390 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 guile-2.2-libs arm64 2.2.7+1-6 [4949 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 guile-2.2 arm64 2.2.7+1-6 [22.0 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2 [93.2 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 libncurses-dev arm64 6.2+20201114-2 [335 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 libncurses5-dev arm64 6.2+20201114-2 [936 B] Get: 62 http://deb.debian.org/debian bullseye/main arm64 libreadline-dev arm64 8.1-1 [153 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 libltdl-dev arm64 2.4.6-15 [162 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 libgmpxx4ldbl arm64 2:6.2.1+dfsg-1 [337 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 libgmp-dev arm64 2:6.2.1+dfsg-1 [625 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 libgc-dev arm64 1:8.0.4-3 [400 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 libglib2.0-0 arm64 2.66.8-1 [1286 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 pkg-config arm64 0.29.2-1 [63.6 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 guile-2.2-dev arm64 2.2.7+1-6 [604 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 guile-3.0-libs arm64 3.0.5-4 [6367 kB] Get: 71 http://deb.debian.org/debian bullseye/main arm64 libnl-3-200 arm64 3.4.0-1+b1 [60.6 kB] Get: 72 http://deb.debian.org/debian bullseye/main arm64 libnl-route-3-200 arm64 3.4.0-1+b1 [149 kB] Get: 73 http://deb.debian.org/debian bullseye/main arm64 libibverbs1 arm64 33.2-1 [56.1 kB] Get: 74 http://deb.debian.org/debian bullseye/main arm64 ibverbs-providers arm64 33.2-1 [235 kB] Get: 75 http://deb.debian.org/debian bullseye/main arm64 libaec0 arm64 1.0.4-1 [19.8 kB] Get: 76 http://deb.debian.org/debian bullseye/main arm64 libsz2 arm64 1.0.4-1 [6736 B] Get: 77 http://deb.debian.org/debian bullseye/main arm64 libaec-dev arm64 1.0.4-1 [18.2 kB] Get: 78 http://deb.debian.org/debian bullseye/main arm64 libblas3 arm64 3.9.0-3 [101 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libblas-dev arm64 3.9.0-3 [107 kB] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libctl7 arm64 4.5.0-9 [111 kB] Get: 81 http://deb.debian.org/debian bullseye/main arm64 libctl-dev arm64 4.5.0-9 [102 kB] Get: 82 http://deb.debian.org/debian bullseye/main arm64 libevent-2.1-7 arm64 2.1.12-stable-1 [176 kB] Get: 83 http://deb.debian.org/debian bullseye/main arm64 libevent-core-2.1-7 arm64 2.1.12-stable-1 [132 kB] Get: 84 http://deb.debian.org/debian bullseye/main arm64 libevent-extra-2.1-7 arm64 2.1.12-stable-1 [105 kB] Get: 85 http://deb.debian.org/debian bullseye/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-1 [57.2 kB] Get: 86 http://deb.debian.org/debian bullseye/main arm64 libevent-openssl-2.1-7 arm64 2.1.12-stable-1 [63.1 kB] Get: 87 http://deb.debian.org/debian bullseye/main arm64 libevent-dev arm64 2.1.12-stable-1 [309 kB] Get: 88 http://deb.debian.org/debian bullseye/main arm64 libexpat1-dev arm64 2.2.10-2 [126 kB] Get: 89 http://deb.debian.org/debian bullseye/main arm64 librdmacm1 arm64 33.2-1 [65.3 kB] Get: 90 http://deb.debian.org/debian bullseye/main arm64 libfabric1 arm64 1.11.0-2 [389 kB] Get: 91 http://deb.debian.org/debian bullseye/main arm64 libfftw3-double3 arm64 3.3.8-2 [385 kB] Get: 92 http://deb.debian.org/debian bullseye/main arm64 libfftw3-long3 arm64 3.3.8-2 [526 kB] Get: 93 http://deb.debian.org/debian bullseye/main arm64 libfftw3-single3 arm64 3.3.8-2 [630 kB] Get: 94 http://deb.debian.org/debian bullseye/main arm64 libfftw3-bin arm64 3.3.8-2 [47.4 kB] Get: 95 http://deb.debian.org/debian bullseye/main arm64 libfftw3-dev arm64 3.3.8-2 [1455 kB] Get: 96 http://deb.debian.org/debian bullseye/main arm64 libgdsii0 arm64 0.2+ds.1-1 [28.3 kB] Get: 97 http://deb.debian.org/debian bullseye/main arm64 libgdsii-dev arm64 0.2+ds.1-1 [32.6 kB] Get: 98 http://deb.debian.org/debian bullseye/main arm64 libgslcblas0 arm64 2.6+dfsg-2 [73.4 kB] Get: 99 http://deb.debian.org/debian bullseye/main arm64 libgsl25 arm64 2.6+dfsg-2 [812 kB] Get: 100 http://deb.debian.org/debian bullseye/main arm64 libgsl-dev arm64 2.6+dfsg-2 [1006 kB] Get: 101 http://deb.debian.org/debian bullseye/main arm64 liblapack3 arm64 3.9.0-3 [1541 kB] Get: 102 http://deb.debian.org/debian bullseye/main arm64 libharminv3 arm64 1.4.1-2 [13.7 kB] Get: 103 http://deb.debian.org/debian bullseye/main arm64 libharminv-dev arm64 1.4.1-2 [4916 B] Get: 104 http://deb.debian.org/debian bullseye/main arm64 libhdf5-103-1 arm64 1.10.6+repack-4 [1032 kB] Get: 105 http://deb.debian.org/debian bullseye/main arm64 libhdf5-hl-100 arm64 1.10.6+repack-4 [78.6 kB] Get: 106 http://deb.debian.org/debian bullseye/main arm64 libhwloc15 arm64 2.4.1+dfsg-1 [131 kB] Get: 107 http://deb.debian.org/debian bullseye/main arm64 libpciaccess0 arm64 0.16-1 [52.9 kB] Get: 108 http://deb.debian.org/debian bullseye/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get: 109 http://deb.debian.org/debian bullseye/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 110 http://deb.debian.org/debian bullseye/main arm64 libxcb1 arm64 1.14-3 [138 kB] Get: 111 http://deb.debian.org/debian bullseye/main arm64 libx11-data all 2:1.7.2-1 [311 kB] Get: 112 http://deb.debian.org/debian bullseye/main arm64 libx11-6 arm64 2:1.7.2-1 [748 kB] Get: 113 http://deb.debian.org/debian bullseye/main arm64 libxext6 arm64 2:1.3.3-1.1 [51.6 kB] Get: 114 http://deb.debian.org/debian bullseye/main arm64 libxnvctrl0 arm64 460.91.03-1 [26.7 kB] Get: 115 http://deb.debian.org/debian bullseye/main arm64 ocl-icd-libopencl1 arm64 2.2.14-2 [41.5 kB] Get: 116 http://deb.debian.org/debian bullseye/main arm64 libhwloc-plugins arm64 2.4.1+dfsg-1 [21.1 kB] Get: 117 http://deb.debian.org/debian bullseye/main arm64 libpmix2 arm64 4.0.0-4.1 [513 kB] Get: 118 http://deb.debian.org/debian bullseye/main arm64 libnuma1 arm64 2.0.12-1+b1 [25.8 kB] Get: 119 http://deb.debian.org/debian bullseye/main arm64 libucx0 arm64 1.10.1~rc1+really.1.10.0-1 [567 kB] Get: 120 http://deb.debian.org/debian bullseye/main arm64 libopenmpi3 arm64 4.1.0-10 [2152 kB] Get: 121 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-103-1 arm64 1.10.6+repack-4 [1067 kB] Get: 122 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-cpp-103-1 arm64 1.10.6+repack-4 [131 kB] Get: 123 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-fortran-102 arm64 1.10.6+repack-4 [104 kB] Get: 124 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-hl-100 arm64 1.10.6+repack-4 [78.5 kB] Get: 125 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-hl-fortran-100 arm64 1.10.6+repack-4 [55.1 kB] Get: 126 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-hl-cpp-100 arm64 1.10.6+repack-4 [37.6 kB] Get: 127 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get: 128 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo arm64 1:2.0.6-4 [133 kB] Get: 129 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo-dev arm64 1:2.0.6-4 [255 kB] Get: 130 http://deb.debian.org/debian bullseye/main arm64 libjpeg-dev arm64 1:2.0.6-4 [67.8 kB] Get: 131 http://deb.debian.org/debian bullseye/main arm64 openmpi-common all 4.1.0-10 [179 kB] Get: 132 http://deb.debian.org/debian bullseye/main arm64 libnl-3-dev arm64 3.4.0-1+b1 [104 kB] Get: 133 http://deb.debian.org/debian bullseye/main arm64 libnl-route-3-dev arm64 3.4.0-1+b1 [176 kB] Get: 134 http://deb.debian.org/debian bullseye/main arm64 libibverbs-dev arm64 33.2-1 [480 kB] Get: 135 http://deb.debian.org/debian bullseye/main arm64 libnuma-dev arm64 2.0.12-1+b1 [40.2 kB] Get: 136 http://deb.debian.org/debian bullseye/main arm64 libhwloc-dev arm64 2.4.1+dfsg-1 [217 kB] Get: 137 http://deb.debian.org/debian bullseye/main arm64 libpmix-dev arm64 4.0.0-4.1 [667 kB] Get: 138 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 139 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 140 http://deb.debian.org/debian bullseye/main arm64 openmpi-bin arm64 4.1.0-10 [237 kB] Get: 141 http://deb.debian.org/debian bullseye/main arm64 libopenmpi-dev arm64 4.1.0-10 [1192 kB] Get: 142 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-dev arm64 1.10.6+repack-4 [2607 kB] Get: 143 http://deb.debian.org/debian bullseye/main arm64 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 144 http://deb.debian.org/debian bullseye/main arm64 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 145 http://deb.debian.org/debian bullseye/main arm64 liblapack-dev arm64 3.9.0-3 [2758 kB] Get: 146 http://deb.debian.org/debian bullseye/main arm64 liblzf1 arm64 3.6-3 [9860 B] Get: 147 http://deb.debian.org/debian bullseye/main arm64 libpython3.9 arm64 3.9.2-1 [1556 kB] Get: 148 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-dev arm64 3.9.2-1 [3835 kB] Get: 149 http://deb.debian.org/debian bullseye/main arm64 libpython3-dev arm64 3.9.2-3 [21.7 kB] Get: 150 http://deb.debian.org/debian bullseye/main arm64 python3.9-dev arm64 3.9.2-1 [515 kB] Get: 151 http://deb.debian.org/debian bullseye/main arm64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 152 http://deb.debian.org/debian bullseye/main arm64 python3-distutils all 3.9.2-1 [143 kB] Get: 153 http://deb.debian.org/debian bullseye/main arm64 python3-dev arm64 3.9.2-3 [24.8 kB] Get: 154 http://deb.debian.org/debian bullseye/main arm64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 155 http://deb.debian.org/debian bullseye/main arm64 python3-numpy arm64 1:1.19.5-1 [3196 kB] Get: 156 http://deb.debian.org/debian bullseye/main arm64 python3-six all 1.16.0-2 [17.5 kB] Get: 157 http://deb.debian.org/debian bullseye/main arm64 python3-h5py-serial arm64 2.10.0-9+b2 [602 kB] Get: 158 http://deb.debian.org/debian bullseye/main arm64 python3-h5py all 2.10.0-9 [11.4 kB] Get: 159 http://deb.debian.org/debian bullseye/main arm64 swig4.0 arm64 4.0.2-1 [1295 kB] Get: 160 http://deb.debian.org/debian bullseye/main arm64 swig all 4.0.2-1 [330 kB] Fetched 88.1 MB in 2s (47.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8_arm64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../1-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../3-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libpython3.9-minimal:arm64. Preparing to unpack .../5-libpython3.9-minimal_3.9.2-1_arm64.deb ... Unpacking libpython3.9-minimal:arm64 (3.9.2-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../6-libexpat1_2.2.10-2_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../7-python3.9-minimal_3.9.2-1_arm64.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:arm64 (3.9.2-1) ... Setting up libexpat1:arm64 (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20513 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_arm64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:arm64. Preparing to unpack .../2-libmpdec3_2.5.1-1_arm64.deb ... Unpacking libmpdec3:arm64 (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../4-libreadline8_8.1-1_arm64.deb ... Unpacking libreadline8:arm64 (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:arm64. Preparing to unpack .../5-libpython3.9-stdlib_3.9.2-1_arm64.deb ... Unpacking libpython3.9-stdlib:arm64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../6-python3.9_3.9.2-1_arm64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../7-libpython3-stdlib_3.9.2-3_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20934 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_arm64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.39-3_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../003-libmagic1_1%3a5.39-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.39-3_arm64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libmd0:arm64. Preparing to unpack .../006-libmd0_1.0.3-3_arm64.deb ... Unpacking libmd0:arm64 (1.0.3-3) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../007-libbsd0_0.11.3-1_arm64.deb ... Unpacking libbsd0:arm64 (0.11.3-1) ... Selecting previously unselected package libedit2:arm64. Preparing to unpack .../008-libedit2_3.1-20191231-2+b1_arm64.deb ... Unpacking libedit2:arm64 (3.1-20191231-2+b1) ... Selecting previously unselected package libcbor0:arm64. Preparing to unpack .../009-libcbor0_0.5.0+dfsg-2_arm64.deb ... Unpacking libcbor0:arm64 (0.5.0+dfsg-2) ... Selecting previously unselected package libfido2-1:arm64. Preparing to unpack .../010-libfido2-1_1.6.0-2_arm64.deb ... Unpacking libfido2-1:arm64 (1.6.0-2) ... Selecting previously unselected package openssh-client. Preparing to unpack .../011-openssh-client_1%3a8.4p1-5_arm64.deb ... Unpacking openssh-client (1:8.4p1-5) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../012-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... 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Setting up swig4.0 (4.0.2-1) ... Setting up libfido2-1:arm64 (1.6.0-2) ... Setting up libgc-dev:arm64 (1:8.0.4-3) ... Setting up libbsd0:arm64 (0.11.3-1) ... Setting up libgdsii0:arm64 (0.2+ds.1-1) ... Setting up libelf1:arm64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up chrpath (0.16-2+b1) ... Setting up libblas-dev:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode Setting up libsz2:arm64 (1.0.4-1) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libevent-extra-2.1-7:arm64 (2.1.12-stable-1) ... Setting up liblapack3:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libncurses-dev:arm64 (6.2+20201114-2) ... Setting up libxcb1:arm64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libgsl-dev (2.6+dfsg-2) ... Setting up swig (4.0.2-1) ... Setting up libgmp-dev:arm64 (2:6.2.1+dfsg-1) ... Setting up libtool (2.4.6-15) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libgdsii-dev:arm64 (0.2+ds.1-1) ... Setting up libedit2:arm64 (3.1-20191231-2+b1) ... Setting up libreadline8:arm64 (8.1-1) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up libjpeg-dev:arm64 (1:2.0.6-4) ... Setting up libevent-openssl-2.1-7:arm64 (2.1.12-stable-1) ... Setting up m4 (1.4.18-5) ... Setting up libreadline-dev:arm64 (8.1-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnuma-dev:arm64 (2.0.12-1+b1) ... Setting up libnl-route-3-200:arm64 (3.4.0-1+b1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libevent-dev (2.1.12-stable-1) ... Setting up liblapack-dev:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up gfortran-10 (10.2.1-6) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up libharminv3 (1.4.1-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libhdf5-103-1:arm64 (1.10.6+repack-4) ... Setting up dwz (0.13+20210201-1) ... Setting up libnl-3-dev:arm64 (3.4.0-1+b1) ... Setting up groff-base (1.22.4-6) ... Setting up libncurses5-dev:arm64 (6.2+20201114-2) ... Setting up libx11-6:arm64 (2:1.7.2-1) ... Setting up libharminv-dev (1.4.1-2) ... Setting up libfftw3-dev:arm64 (3.3.8-2) ... Setting up guile-2.2-libs:arm64 (2.2.7+1-6) ... 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Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxnvctrl0:arm64 (460.91.03-1) ... Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:arm64 (3.4.0-1+b1) ... Setting up libltdl-dev:arm64 (2.4.6-15) ... Setting up libctl7:arm64 (4.5.0-9) ... Setting up guile-2.2-dev (2.2.7+1-6) ... update-alternatives: using /usr/bin/guile-config-2.2 to provide /usr/bin/guile-config (guile-config) in auto mode update-alternatives: using /usr/share/aclocal/guile-2.2.m4 to provide /usr/share/aclocal/guile.m4 (guile-autoconf-macros) in auto mode Setting up libpython3.9:arm64 (3.9.2-1) ... Setting up libhwloc-dev:arm64 (2.4.1+dfsg-1) ... Setting up python3.9 (3.9.2-1) ... Setting up librdmacm1:arm64 (33.2-1) ... Setting up libucx0:arm64 (1.10.1~rc1+really.1.10.0-1) ... Setting up libpython3.9-dev:arm64 (3.9.2-1) ... 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Setting up openmpi-bin (4.1.0-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libhdf5-openmpi-103-1:arm64 (1.10.6+repack-4) ... Setting up python3-h5py-serial (2.10.0-9+b2) ... Setting up libhdf5-openmpi-fortran-102:arm64 (1.10.6+repack-4) ... Setting up python3-h5py (2.10.0-9) ... Setting up libhdf5-openmpi-hl-100:arm64 (1.10.6+repack-4) ... Setting up libopenmpi-dev:arm64 (4.1.0-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up libhdf5-openmpi-cpp-103-1:arm64 (1.10.6+repack-4) ... Setting up libhdf5-openmpi-hl-cpp-100:arm64 (1.10.6+repack-4) ... Setting up libhdf5-openmpi-hl-fortran-100:arm64 (1.10.6+repack-4) ... Setting up libhdf5-openmpi-dev (1.10.6+repack-4) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package hostname: Temporary failure in name resolution I: Running cd /build/meep-openmpi-1.17.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../meep-openmpi_1.17.1-2_source.changes dpkg-buildpackage: info: source package meep-openmpi dpkg-buildpackage: info: source version 1.17.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Thorsten Alteholz dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/build/meep-openmpi-1.17.1' # we do not need this anymore rm -f tests/latest_output dh_clean make[1]: Leaving directory '/build/meep-openmpi-1.17.1' debian/rules build dh build --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:24: installing './compile' configure.ac:68: installing './config.guess' configure.ac:68: installing './config.sub' configure.ac:12: installing './install-sh' configure.ac:12: installing './missing' libpympb/Makefile.am: installing './depcomp' python/Makefile.am:213: installing './py-compile' parallel-tests: installing './test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/meep-openmpi-1.17.1' F77=gfortran dh_auto_configure -- --host=aarch64-linux-gnu --build=aarch64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --with-mpi=yes --enable-maintainer-mode ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=aarch64-linux-gnu --build=aarch64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --with-mpi=yes --enable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for aarch64-linux-gnu-gcc... aarch64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether aarch64-linux-gnu-gcc accepts -g... yes checking for aarch64-linux-gnu-gcc option to accept ISO C89... none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of aarch64-linux-gnu-gcc... none checking for aarch64-linux-gnu-g++... aarch64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether aarch64-linux-gnu-g++ accepts -g... yes checking dependency style of aarch64-linux-gnu-g++... none checking for mpic++... mpic++ checking for MPI_Init... yes checking for mpi.h... yes checking for extra flag needed to combine stdio.h and mpi.h... none checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for C++ compiler vendor... gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by aarch64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/aarch64-linux-gnu-nm -B checking the name lister (/usr/bin/aarch64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for aarch64-linux-gnu-objdump... aarch64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for aarch64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-linux-gnu-ar... aarch64-linux-gnu-ar checking for archiver @FILE support... @ checking for aarch64-linux-gnu-strip... aarch64-linux-gnu-strip checking for aarch64-linux-gnu-ranlib... aarch64-linux-gnu-ranlib checking command to parse /usr/bin/aarch64-linux-gnu-nm -B output from aarch64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for aarch64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... aarch64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if aarch64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for aarch64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if aarch64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if aarch64-linux-gnu-gcc static flag -static works... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the aarch64-linux-gnu-gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpic++ -E checking for ld used by mpic++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the mpic++ linker (/usr/bin/ld) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for latex2html... no configure: WARNING: Cannot find latex2html in your path! checking for sin in -lm... yes checking for fftw_plan_dft_1d in -lfftw3... yes checking for aarch64-linux-gnu-g77... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sgemm_... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_... (cached) no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for pkg-config... /usr/bin/pkg-config checking for harminv >= 1.1... yes checking HARMINV_CFLAGS... checking HARMINV_LIBS... -lharminv checking mpb.h usability... no checking mpb.h presence... no checking for mpb.h... no checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_sf_bessel_Jn in -lgsl... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... yes checking for mpirun... mpirun checking for guile-config... guile-config checking if linking to guile works... yes checking libguile.h usability... yes checking libguile.h presence... yes checking for libguile.h... yes checking guile/gh.h usability... no checking guile/gh.h presence... no checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for SCM_SMOB_PREDICATE... no checking for SCM_SMOB_DATA... no checking for SCM_NEWSMOB... no checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking ctl.h usability... yes checking ctl.h presence... yes checking for ctl.h... yes checking whether libctl version is at least 4.2.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking libGDSII.h usability... yes checking libGDSII.h presence... yes checking for libGDSII.h... yes checking for libGDSIIExists in -lGDSII... yes checking for libGDSII::GetLayers... no checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes checking whether to catch and ignore SIGFPE signals... yes checking whether time.h and sys/time.h may both be included... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for cblas_ddot... yes checking for cblas_daxpy... yes checking for jn... yes checking for C/C++ restrict keyword... __restrict checking for swig... swig checking for python... no checking for python2... no checking for python3... /usr/bin/python3 checking for python version... 3.9 checking for python platform... linux checking for python script directory... ${prefix}/lib/python3.9/site-packages checking for python extension module directory... ${exec_prefix}/lib/python3.9/site-packages checking for Python include directory... /usr/include/python3.9 checking Python.h usability... yes checking Python.h presence... yes checking for Python.h... yes checking for Numpy include directory... /usr/lib/python3/dist-packages/numpy/core/include checking for numpy/arrayobject.h... yes checking for coverage module... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating scheme/Makefile config.status: creating scheme/meep.scm config.status: creating libpympb/Makefile config.status: creating python/Makefile config.status: creating Makefile config.status: creating meep-pkgconfig config.status: creating src/Makefile config.status: creating src/support/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/meep-openmpi-1.17.1' dh_auto_build make -j8 make[1]: Entering directory '/build/meep-openmpi-1.17.1' make all-recursive make[2]: Entering directory '/build/meep-openmpi-1.17.1' Making all in src make[3]: Entering directory '/build/meep-openmpi-1.17.1/src' make sphere_quad (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; sed 's/LOOP_OVER/S1LOOP_OVER/g' ../src/step_generic.cpp | sed 's/step_curl/step_curl_stride1/' | sed 's/step_update_EDHB/step_update_EDHB_stride1/' | sed 's/step_beta/step_beta_stride1/') > step_generic_stride1.cpp make[4]: Entering directory '/build/meep-openmpi-1.17.1/src' make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sphere-quad.o sphere-quad.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-openmpi-1.17.1/src' (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../src/sphere_quad) > sphere-quad.h make all-recursive make[4]: Entering directory '/build/meep-openmpi-1.17.1/src' Making all in support make[5]: Entering directory '/build/meep-openmpi-1.17.1/src/support' /bin/sh ../../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mt19937ar.lo mt19937ar.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -c mt19937ar.c -fPIC -DPIC -o .libs/mt19937ar.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -c mt19937ar.c -fPIC -DPIC -o mt19937ar.o >/dev/null 2>&1 /bin/sh ../../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o libsupport.la mt19937ar.lo -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-ar cr .libs/libsupport.a .libs/mt19937ar.o libtool: link: aarch64-linux-gnu-ranlib .libs/libsupport.a libtool: link: ( cd ".libs" && rm -f "libsupport.la" && ln -s "../libsupport.la" "libsupport.la" ) make[5]: Leaving directory '/build/meep-openmpi-1.17.1/src/support' make[5]: Entering directory '/build/meep-openmpi-1.17.1/src' /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array_slice.lo array_slice.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o anisotropic_averaging.lo anisotropic_averaging.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bands.lo bands.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o boundaries.lo boundaries.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bicgstab.lo bicgstab.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o casimir.lo casimir.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cw_fields.lo cw_fields.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft.lo dft.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o .libs/casimir.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o .libs/array_slice.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o .libs/cw_fields.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o .libs/bands.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o .libs/anisotropic_averaging.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft.cpp -fPIC -DPIC -o .libs/dft.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o .libs/bicgstab.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o .libs/boundaries.o anisotropic_averaging.cpp: In function 'meep::vec meep::sphere_pt(const meep::vec&, double, int, double&)': anisotropic_averaging.cpp:39:19: warning: control reaches end of non-void function [-Wreturn-type] 39 | default: abort("unknown dimensions in sphere_pt\n"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ boundaries.cpp: In member function 'meep::ivec meep::fields::ilattice_vector(meep::direction) const': boundaries.cpp:69:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 69 | switch (d) { | ^~~~~~ boundaries.cpp:77:5: note: here 77 | case D3: | ^~~~ dft.cpp: In member function 'cdouble meep::dft_chunk::process_dft_component(int, meep::direction*, meep::ivec, meep::ivec, int, meep::h5file*, double*, int, cdouble*, void*, void*, int, bool, meep::fields*)': dft.cpp:749:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 749 | if ((num_freq < 0) || (num_freq > omega.size()-1)) | ~~~~~~~~~^~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o bands.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o bicgstab.o >/dev/null 2>&1 In file included from meep.hpp:24, from meep_internals.hpp:19, from cw_fields.cpp:18: meep/vec.hpp: In function 'void meep::fields_to_array(const meep::fields&, std::complex*)': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ In file included from meep.hpp:24, from boundaries.cpp:21: meep/vec.hpp: In member function 'bool meep::fields::locate_component_point(meep::component*, meep::ivec*, std::complex*) const': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft_ldos.lo dft_ldos.cpp In file included from meep.hpp:24, from casimir.cpp:29: meep/vec.hpp: In member function 'std::complex meep::fields::casimir_stress_dct_integral(meep::direction, meep::direction, double, double, double, meep::field_type, meep::volume, bool)': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o .libs/dft_ldos.o meep/vec.hpp: In function 'void meep::array_to_fields(const std::complex*, meep::fields&)': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o casimir.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o energy_and_flux.lo energy_and_flux.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o .libs/energy_and_flux.o dft.cpp: In member function 'void meep::fields::get_overlap(void*, void*, meep::dft_flux, int, cdouble*)': dft.cpp:1246:57: warning: '*((void*)& cH +4)' may be used uninitialized in this function [-Wmaybe-uninitialized] 1246 | mode2_data, cE[1]); | ^ dft.cpp:1244:57: warning: 'cH' may be used uninitialized in this function [-Wmaybe-uninitialized] 1244 | mode2_data, cE[0]); | ^ dft.cpp:1246:57: warning: '*((void*)& cE +4)' may be used uninitialized in this function [-Wmaybe-uninitialized] 1246 | mode2_data, cE[1]); | ^ dft.cpp:1244:57: warning: 'cE' may be used uninitialized in this function [-Wmaybe-uninitialized] 1244 | mode2_data, cE[0]); | ^ meep/vec.hpp: In member function 'bool meep::fields::solve_cw(double, int, std::complex, int, std::complex*, double, int)': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o boundaries.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o cw_fields.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o array_slice.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o dft_ldos.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft.cpp -fPIC -DPIC -o dft.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o anisotropic_averaging.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fields.lo fields.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o energy_and_flux.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields.cpp -fPIC -DPIC -o .libs/fields.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o loop_in_chunks.lo loop_in_chunks.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o .libs/loop_in_chunks.o loop_in_chunks.cpp: In member function 'void meep::fields::loop_in_chunks(meep::field_chunkloop, void*, const meep::volume&, meep::component, bool, bool)': loop_in_chunks.cpp:425:44: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 425 | vS = S.transform(chunks[i]->v, sn); | ^ In file included from meep.hpp:24, from loop_in_chunks.cpp:22: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ loop_in_chunks.cpp:434:82: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 434 | chunks[i]->gv.loc(Centered, chunks[i]->gv.ntot() - 1) + pad); | ^ In file included from meep.hpp:24, from loop_in_chunks.cpp:22: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ fields.cpp: In member function 'meep::volume meep::fields::total_volume() const': fields.cpp:639:31: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 639 | v = v | S.transform(gv0, n); | ^ In file included from meep.hpp:24, from fields.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5fields.lo h5fields.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5fields.cpp -fPIC -DPIC -o .libs/h5fields.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5file.lo h5file.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5file.cpp -fPIC -DPIC -o .libs/h5file.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o initialize.lo initialize.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c initialize.cpp -fPIC -DPIC -o .libs/initialize.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate.lo integrate.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate.cpp -fPIC -DPIC -o .libs/integrate.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields.cpp -fPIC -DPIC -o fields.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o loop_in_chunks.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5file.cpp -fPIC -DPIC -o h5file.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate.cpp -fPIC -DPIC -o integrate.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate2.lo integrate2.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o .libs/integrate2.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c initialize.cpp -fPIC -DPIC -o initialize.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5fields.cpp -fPIC -DPIC -o h5fields.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o monitor.lo monitor.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o .libs/monitor.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mympi.lo mympi.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o .libs/mympi.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o multilevel-atom.lo multilevel-atom.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o near2far.lo near2far.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o .libs/near2far.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o .libs/multilevel-atom.o monitor.cpp: In member function 'double meep::fields::get_field(meep::derived_component, const meep::vec&, bool) const': monitor.cpp:123:19: warning: control reaches end of non-void function [-Wreturn-type] 123 | default: abort("unknown derived_component in get_field"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o output_directory.lo output_directory.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o .libs/output_directory.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o random.lo random.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o integrate2.o >/dev/null 2>&1 near2far.cpp: In member function 'meep::dft_near2far meep::fields::add_dft_near2far(const meep::volume_list*, const double*, size_t, int)': near2far.cpp:569:38: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 569 | everywhere = everywhere | where->v; | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from near2far.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o .libs/random.o In file included from /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/lib/aarch64-linux-gnu/openmpi/include/mpi.h:2887, from mympi.cpp:32: /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ monitor.cpp: In member function 'std::complex meep::structure_chunk::get_chi1inv_at_pt(meep::component, meep::direction, int, double) const': monitor.cpp:325:19: warning: 'comp_list[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] 325 | component cc = comp_list[com_it]; | ^~ mympi.cpp: In function 'void meep::abort(const char*, ...)': mympi.cpp:124:12: warning: ignoring return value of 'int vasprintf(char**, const char*, __gnuc_va_list)' declared with attribute 'warn_unused_result' [-Wunused-result] 124 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ mympi.cpp: In function 'void meep::_do_master_printf(FILE*, meep::meep_printf_callback_func, const char*, va_list)': mympi.cpp:596:16: warning: ignoring return value of 'int vasprintf(char**, const char*, __gnuc_va_list)' declared with attribute 'warn_unused_result' [-Wunused-result] 596 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ In file included from meep.hpp:24, from multilevel-atom.cpp:22: meep/vec.hpp: In member function 'virtual void meep::multilevel_susceptibility::subtract_P(meep::field_type, meep::realnum* (*)[2], void*) const': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sources.lo sources.cpp output_directory.cpp: In function 'const char* meep::make_output_directory(const char*, const char*)': output_directory.cpp:117:35: warning: '-out' directive output may be truncated writing 4 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 117 | snprintf(outdirname, buflen, "%s-out", basename); | ^~~~ In file included from /usr/include/stdio.h:867, from output_directory.cpp:18: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 304 bytes into a destination of size 300 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ output_directory.cpp:126:36: warning: '%s' directive output may be truncated writing up to 299 bytes into a region of size between 0 and 299 [-Wformat-truncation=] 126 | snprintf(outsrcname, buflen, "%s/%s", outdirname, sourcename); | ^~ ~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from output_directory.cpp:18: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 2 and 600 bytes into a destination of size 300 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ output_directory.cpp:122:39: warning: '-out-' directive output may be truncated writing 5 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 122 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~ output_directory.cpp:122:36: note: directive argument in the range [0, 2147483647] 122 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from output_directory.cpp:18: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 7 and 315 bytes into a destination of size 300 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o .libs/sources.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o output_directory.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o monitor.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o random.o >/dev/null 2>&1 meep/vec.hpp: In function 'void meep::greencyl(std::complex*, const meep::vec&, double, double, double, const meep::vec&, meep::component, std::complex, double, double)': meep/vec.hpp:429:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 429 | case Y: return (component)(start_point + 1); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o multilevel-atom.o >/dev/null 2>&1 sources.cpp: In function 'std::complex meep::gaussianbeam_ampfunc(const meep::vec&)': sources.cpp:490:1: warning: control reaches end of non-void function [-Wreturn-type] 490 | } | ^ near2far.cpp: In member function 'meep::dft_near2far meep::fields::add_dft_near2far(const meep::volume_list*, const double*, size_t, int)': near2far.cpp:626:42: warning: 'fd[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] 626 | component c = direction_component(i == 0 ? Ex : Hx, fd[j]); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step.lo step.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_db.lo step_db.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o .libs/step.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o mympi.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o .libs/step_db.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o stress.lo stress.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o .libs/stress.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure.lo structure.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure.cpp -fPIC -DPIC -o .libs/structure.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o near2far.o >/dev/null 2>&1 In file included from meep.hpp:24, from step.cpp:22: meep/vec.hpp: In member function 'void meep::fields_chunk::step_source(meep::field_type, bool)': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ In file included from stress.cpp:21: ./meep.hpp: In constructor 'meep::dft_force::dft_force(meep::dft_chunk*, meep::dft_chunk*, meep::dft_chunk*, const double*, size_t, const meep::volume&)': ./meep.hpp:1194:10: warning: 'meep::dft_force::where' will be initialized after [-Wreorder] 1194 | volume where; | ^~~~~ ./meep.hpp:1192:23: warning: 'std::vector meep::dft_force::freq' [-Wreorder] 1192 | std::vector freq; | ^~~~ stress.cpp:47:1: warning: when initialized here [-Wreorder] 47 | dft_force::dft_force(dft_chunk *offdiag1_, dft_chunk *offdiag2_, dft_chunk *diag_, | ^~~~~~~~~ stress.cpp: In member function 'meep::dft_force meep::fields::add_dft_force(const meep::volume_list*, const double*, size_t)': stress.cpp:182:38: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 182 | everywhere = everywhere | where->v; | ^ In file included from ./meep.hpp:24, from stress.cpp:21: ./meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure_dump.lo structure_dump.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o step.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o .libs/structure_dump.o In file included from meep.hpp:24, from step_db.cpp:23: meep/vec.hpp: In member function 'bool meep::fields_chunk::step_db(meep::field_type)': meep/vec.hpp:429:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 429 | case Y: return (component)(start_point + 1); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o sources.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o stress.o >/dev/null 2>&1 structure.cpp: In member function 'void meep::structure::choose_chunkdivision(const meep::grid_volume&, int, const meep::boundary_region&, const meep::symmetry&)': structure.cpp:130:23: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 130 | v = gv.surroundings(); | ^ In file included from meep.hpp:24, from structure.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ structure.cpp: In function 'std::vector meep::choose_chunkdivision(meep::grid_volume&, meep::volume&, int, const meep::symmetry&)': structure.cpp:207:25: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 207 | v = gv.surroundings(); | ^ In file included from meep.hpp:24, from structure.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o susceptibility.lo susceptibility.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o step_db.o >/dev/null 2>&1 structure_dump.cpp: In member function 'void meep::structure::dump(const char*)': structure_dump.cpp:275:46: warning: '_' directive output may be truncated writing 1 byte into a region of size between 0 and 9 [-Wformat-truncation=] 275 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^ structure_dump.cpp:275:31: note: using the range [-2147483648, 2147483647] for directive argument 275 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from structure_dump.cpp:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 14 and 43 bytes into a destination of size 20 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o .libs/susceptibility.o structure_dump.cpp: In member function 'void meep::structure::load(const char*)': structure_dump.cpp:644:44: warning: '%d' directive output may be truncated writing between 1 and 2 bytes into a region of size between 1 and 10 [-Wformat-truncation=] 644 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~ structure_dump.cpp:644:31: note: directive argument in the range [0, 19] 644 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ structure_dump.cpp:644:31: note: directive argument in the range [0, 4] In file included from /usr/include/stdio.h:867, from structure_dump.cpp:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 14 and 24 bytes into a destination of size 20 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o time.lo time.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o .libs/time.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_eh.lo update_eh.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o structure_dump.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o .libs/update_eh.o In file included from meep.hpp:24, from susceptibility.cpp:31: meep/vec.hpp: In member function 'virtual void meep::lorentzian_susceptibility::subtract_P(meep::field_type, meep::realnum* (*)[2], void*) const': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o time.o >/dev/null 2>&1 meep/vec.hpp: In member function 'virtual void meep::gyrotropic_susceptibility::subtract_P(meep::field_type, meep::realnum* (*)[2], void*) const': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp: In member function 'virtual bool meep::susceptibility::needs_W_notowned(meep::component, meep::realnum* (*)[2]) const': meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mpb.lo mpb.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o .libs/mpb.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_pols.lo update_pols.cpp In file included from meep.hpp:24, from update_eh.cpp:20: meep/vec.hpp: In member function 'bool meep::fields_chunk::update_eh(meep::field_type, bool)': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o .libs/update_pols.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o vec.lo vec.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o update_eh.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic.lo step_generic.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o .libs/vec.o mpb.cpp: In member function 'void* meep::fields::get_eigenmode(double, meep::direction, meep::volume, meep::volume, int, const meep::vec&, bool, int, double, double, double*, void**, meep::diffractedplanewave*)': mpb.cpp:986:1: warning: no return statement in function returning non-void [-Wreturn-type] 986 | } | ^ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o .libs/step_generic.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meepgeom.lo meepgeom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o mpb.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o .libs/meepgeom.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o susceptibility.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o update_pols.o >/dev/null 2>&1 vec.cpp: In member function 'size_t meep::grid_volume::surface_area() const': vec.cpp:866:14: warning: statement has no effect [-Wunused-value] 866 | case D1: 2; | ^ vec.cpp: In member function 'meep::signed_direction meep::symmetry::transform(meep::direction, int) const': vec.cpp:1367:27: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 1367 | if (nme == 1) sd = S[d]; | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ vec.cpp:1369:43: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 1369 | sd = flip(transform(S[d].d, nme - 1)); | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ vec.cpp:1371:37: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 1371 | sd = transform(S[d].d, nme - 1); | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ vec.cpp: In member function 'double meep::grid_volume::boundary_location(meep::boundary_side, meep::direction) const': vec.cpp:712:20: warning: this statement may fall through [-Wimplicit-fallthrough=] 712 | case P: abort("P has no boundary!\n"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ vec.cpp:713:7: note: here 713 | case NO_DIRECTION: abort("NO_DIRECTION has no boundary!\n"); | ^~~~ vec.cpp:725:20: warning: this statement may fall through [-Wimplicit-fallthrough=] 725 | case P: abort("P has no boundary!\n"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ vec.cpp:726:7: note: here 726 | case NO_DIRECTION: abort("NO_DIRECTION has no boundary!\n"); | ^~~~ meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient(meep::realnum*, size_t, std::complex*, std::complex*, meep::realnum*, size_t, meep::realnum, const meep::volume&, geom_box_tree, meep::fields*)': meepgeom.cpp:2475:9: warning: unused variable 'rank' [-Wunused-variable] 2475 | int rank = f->get_array_slice_dimensions(where, &dims[3 * c], dirs, true, false, min_max_loc, | ^~~~ meepgeom.cpp:2496:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 2496 | for (int i1 = 0; i1 < nf; ++i1) { // freq | ~~~^~~~ meepgeom.cpp:2497:22: warning: unused variable 'v_cur' [-Wunused-variable] 2497 | meep::realnum *v_cur = &v[ng * i1]; | ^~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o GDSIIgeom.lo GDSIIgeom.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic_stride1.lo step_generic_stride1.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o .libs/GDSIIgeom.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o .libs/step_generic_stride1.o meepgeom.cpp: In function 'meep::vec meep_geom::vector3_to_vec(vector3)': meepgeom.cpp:254:25: warning: control reaches end of non-void function [-Wreturn-type] 254 | default: meep::abort("unknown dimensionality in vector3_to_vec"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meepgeom.cpp: In function 'double meep_geom::vec_to_value(vector3, vector3, int)': meepgeom.cpp:2227:1: warning: control reaches end of non-void function [-Wreturn-type] 2227 | } | ^ meepgeom.cpp: In function 'std::complex meep_geom::cvec_to_value(vector3, cvector3, int)': meepgeom.cpp:2212:1: warning: control reaches end of non-void function [-Wreturn-type] 2212 | } | ^ meepgeom.cpp: At global scope: meepgeom.cpp:2190:13: warning: 'void meep_geom::print_tensor(std::complex*)' defined but not used [-Wunused-function] 2190 | static void print_tensor(std::complex *in) { | ^~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure.cpp -fPIC -DPIC -o structure.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o GDSIIgeom.o >/dev/null 2>&1 In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp: In member function 'meep::component meep::symmetry::transform(meep::component, int) const': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meepgeom.cpp: In function 'meep::realnum meep_geom::get_material_gradient(meep::realnum, std::complex, std::complex, meep::realnum, meep_geom::material_data*, meep::component, meep::realnum)': meepgeom.cpp:2314:62: warning: 'dir_idx' may be used uninitialized in this function [-Wmaybe-uninitialized] 2314 | std::complex result = fields_a * dA_du[3 * dir_idx + dir_idx] * fields_f; | ~~~~~~~~~~~~^~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o meepgeom.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o vec.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o step_generic.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o step_generic_stride1.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 23:1:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o libmeep.la -rpath /usr/lib/aarch64-linux-gnu array_slice.lo anisotropic_averaging.lo bands.lo boundaries.lo bicgstab.lo casimir.lo cw_fields.lo dft.lo dft_ldos.lo energy_and_flux.lo fields.lo loop_in_chunks.lo h5fields.lo h5file.lo initialize.lo integrate.lo integrate2.lo monitor.lo mympi.lo multilevel-atom.lo near2far.lo output_directory.lo random.lo sources.lo step.lo step_db.lo stress.lo structure.lo structure_dump.lo susceptibility.lo time.lo update_eh.lo mpb.lo update_pols.lo vec.lo step_generic.lo meepgeom.lo GDSIIgeom.lo step_generic_stride1.lo support/libsupport.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/10/crtbeginS.o .libs/array_slice.o .libs/anisotropic_averaging.o .libs/bands.o .libs/boundaries.o .libs/bicgstab.o .libs/casimir.o .libs/cw_fields.o .libs/dft.o .libs/dft_ldos.o .libs/energy_and_flux.o .libs/fields.o .libs/loop_in_chunks.o .libs/h5fields.o .libs/h5file.o .libs/initialize.o .libs/integrate.o .libs/integrate2.o .libs/monitor.o .libs/mympi.o .libs/multilevel-atom.o .libs/near2far.o .libs/output_directory.o .libs/random.o .libs/sources.o .libs/step.o .libs/step_db.o .libs/stress.o .libs/structure.o .libs/structure_dump.o .libs/susceptibility.o .libs/time.o .libs/update_eh.o .libs/mpb.o .libs/update_pols.o .libs/vec.o .libs/step_generic.o .libs/meepgeom.o .libs/GDSIIgeom.o .libs/step_generic_stride1.o -Wl,--whole-archive support/.libs/libsupport.a -Wl,--no-whole-archive -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -lfftw3 -lgfortran -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/10/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,libmeep.so.23 -o .libs/libmeep.so.23.0.1 libtool: link: (cd ".libs" && rm -f "libmeep.so.23" && ln -s "libmeep.so.23.0.1" "libmeep.so.23") libtool: link: (cd ".libs" && rm -f "libmeep.so" && ln -s "libmeep.so.23.0.1" "libmeep.so") libtool: link: (cd .libs/libmeep.lax/libsupport.a && aarch64-linux-gnu-ar x "/build/meep-openmpi-1.17.1/src/support/.libs/libsupport.a") libtool: link: aarch64-linux-gnu-ar cr .libs/libmeep.a array_slice.o anisotropic_averaging.o bands.o boundaries.o bicgstab.o casimir.o cw_fields.o dft.o dft_ldos.o energy_and_flux.o fields.o loop_in_chunks.o h5fields.o h5file.o initialize.o integrate.o integrate2.o monitor.o mympi.o multilevel-atom.o near2far.o output_directory.o random.o sources.o step.o step_db.o stress.o structure.o structure_dump.o susceptibility.o time.o update_eh.o mpb.o update_pols.o vec.o step_generic.o meepgeom.o GDSIIgeom.o step_generic_stride1.o .libs/libmeep.lax/libsupport.a/mt19937ar.o libtool: link: aarch64-linux-gnu-ranlib .libs/libmeep.a libtool: link: rm -fr .libs/libmeep.lax libtool: link: ( cd ".libs" && rm -f "libmeep.la" && ln -s "../libmeep.la" "libmeep.la" ) make[5]: Leaving directory '/build/meep-openmpi-1.17.1/src' make[4]: Leaving directory '/build/meep-openmpi-1.17.1/src' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/src' Making all in tests make[3]: Entering directory '/build/meep-openmpi-1.17.1/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meep-openmpi-1.17.1/tests' Making all in scheme make[3]: Entering directory '/build/meep-openmpi-1.17.1/scheme' gen-ctl-io --cxx --header -o ctl-io.h meep.scm /usr/share/libctl gen-ctl-io --cxx --swig -o ctl-io.i meep.scm /usr/share/libctl (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; perl -pe 's/^ *class +([A-Za-z_0-9:]*)( *| *:[^{]*){.*$/%rename(meep_\1) meep::\1;/' ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | grep "%rename" | sort -u; echo; grep -hv typedef ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/(inline|const|extern|static) +//g' | perl -pe 's/^[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%rename(meep_\1) meep::\1;/' | grep "%rename" | sort -u; ) > meep_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; for f in ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp; do egrep "^enum" $f | perl -pe 's/enum +([A-Za-z_0-9:]+).*$/\1/g' | while read enum; do cat $f | tr -d '\n' | perl -pe 's/.*enum +'${enum}' *{([^}]*)}.*/\1/g' | perl -pe 's/= *[0-9]+//g' |tr -d ' \t' | tr ',' '\n' | perl -pe 's/^(.*)$/'"%rename(meep_${enum}_\1) meep::\1;/g"; echo; done; done;) > meep_enum_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; grep -h friend ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/^ *friend +[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%ignore \1;/' | grep "%ignore" | sort -u;) > meep_swig_bug_workaround.i (perl -pe 's/%rename\(([A-Za-z0-9_]*)\) *([A-Za-z0-9:_]*);$/(define \2 (\1))/' meep_enum_renames.i | perl -pe 's/[A-Za-z0-9:_]*:://g' | perl -pe 's/_/-/g' | perl -pe 's,//,;,'; echo "(define Centered Dielectric)") > meep-enums.scm ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" swig -I../src -c++ -guile -o meep_wrap.cxx ./meep.i cp -f /usr/share/libctl/base/main.c main.cpp cp -f /usr/share/libctl/utils/geom.c geom.cpp gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" patch -p0 meep_wrap.cxx < ./meep_wrap.patch patching file meep_wrap.cxx Hunk #1 succeeded at 798 (offset 47 lines). sed -i.bak '/(SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob))/ s/swig_collectable_tag, smob)/swig_collectable_tag, smob) || SCM_SMOB_PREDICATE((swig_collectable_tag \& ~0xff00), (smob))/' meep_wrap.cxx; make all-am make[4]: Entering directory '/build/meep-openmpi-1.17.1/scheme' mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-meep.o `test -f 'meep.cpp' || echo './'`meep.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-structure.o `test -f 'structure.cpp' || echo './'`structure.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-meep_wrap.o `test -f 'meep_wrap.cxx' || echo './'`meep_wrap.cxx mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-main.o `test -f 'main.cpp' || echo './'`main.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-geom.o `test -f 'geom.cpp' || echo './'`geom.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-ctl-io.o `test -f 'ctl-io.cpp' || echo './'`ctl-io.cpp geom.cpp:22: warning: "_GNU_SOURCE" redefined 22 | #define _GNU_SOURCE | : note: this is the location of the previous definition In file included from ctl-io.h:7, from main.cpp:37: main.cpp: In function 'void main_entry(void*, int, char**)': main.cpp:194:31: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:202:44: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:205:45: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ctl-io.h:7, from ctl-io.cpp:7: ctl-io.cpp: In function 'void ctlio::export_external_functions()': ctl-io.cpp:2229:38: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2229 | gh_new_procedure("square-basis-aux", (SCM (*)()) square_basis_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2230:51: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2230 | gh_new_procedure("range-overlap-with-object-aux", (SCM (*)()) range_overlap_with_object_aux, 5, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2231:55: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2231 | gh_new_procedure("display-geometric-object-info-aux", (SCM (*)()) display_geometric_object_info_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2232:51: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2232 | gh_new_procedure("point-in-periodic-object?-aux", (SCM (*)()) point_in_periodic_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2233:42: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2233 | gh_new_procedure("normal-to-object-aux", (SCM (*)()) normal_to_object_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2234:42: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2234 | gh_new_procedure("point-in-object?-aux", (SCM (*)()) point_in_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ geom.cpp: In function 'vector3 normal_to_prism(ctlio::prism*, vector3)': geom.cpp:2357:11: warning: variable 'axisp' set but not used [-Wunused-but-set-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ structure.cpp: In function 'meep::vec vector3_to_vec(vector3)': structure.cpp:148:25: warning: control reaches end of non-void function [-Wreturn-type] 148 | default: meep::abort("unknown dimensionality in vector3_to_vec"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_flip(SCM)': meep_wrap.cxx:2857:13: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 2857 | arg1 = *argp1; | ^~~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep_wrap.cxx:2859:27: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 2859 | result = meep::flip(arg1); | ^ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_symmetry_transform__SWIG_0(int, scm_unused_struct**)': meep_wrap.cxx:10569:63: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 10569 | result = ((meep::symmetry const *)arg1)->transform(arg2,arg3); | ^ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_volume_list_v_set(SCM, SCM)': meep_wrap.cxx:11678:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 11678 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ structure.cpp: In member function 'virtual void geom_epsilon::eff_chi1inv_row(meep::component, double*, const meep::volume&, double, int)': structure.cpp:580:10: warning: 'mat1' may be used uninitialized in this function [-Wmaybe-uninitialized] 580 | mat2 = mat1; | ~~~~~^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_structure_chunk_v_set(SCM, SCM)': meep_wrap.cxx:20561:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 20561 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_structure_v_set(SCM, SCM)': meep_wrap.cxx:23197:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 23197 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_0(int, scm_unused_struct**)': meep_wrap.cxx:33250:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33250 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:33253:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33253 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_1(int, scm_unused_struct**)': meep_wrap.cxx:33310:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33310 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:33313:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33313 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_2(int, scm_unused_struct**)': meep_wrap.cxx:33365:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33365 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:33368:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33368 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_flux_where_set(SCM, SCM)': meep_wrap.cxx:34591:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 34591 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_energy_where_set(SCM, SCM)': meep_wrap.cxx:36086:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 36086 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_force_where_set(SCM, SCM)': meep_wrap.cxx:37357:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 37357 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_near2far_where_set(SCM, SCM)': meep_wrap.cxx:39150:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 39150 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_fields_where_set(SCM, SCM)': meep_wrap.cxx:40132:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 40132 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_fields_chunk_v_set(SCM, SCM)': meep_wrap.cxx:41700:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 41700 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_fields_v_set(SCM, SCM)': meep_wrap.cxx:44472:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 44472 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ ../src/meep/vec.hpp: In function 'scm_unused_struct* _wrap_meep_field_type_component(SCM, SCM)': ../src/meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp: In function 'scm_unused_struct* _wrap_meep_cycle_component(SCM, SCM, SCM)': ../src/meep/vec.hpp:430:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 430 | case Z: return (component)(start_point + 4); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp: In function 'scm_unused_struct* _wrap_meep_direction_component(SCM)': ../src/meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/libmeep.la -lctl -lguile-2.2 -lgc -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/.libs/libmeep.so -lctl -lguile-2.2 -lgc -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-openmpi-1.17.1/scheme' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/scheme' Making all in python make[3]: Entering directory '/build/meep-openmpi-1.17.1/python' swig -Wextra -I../src -I../libpympb -I.. -outdir . -c++ -nofastunpack -python -o meep-python.cxx ./meep.i cp meep.py __init__.py echo "__version__ = '1.17.1'" >> __init__.py if [[ "4.0.2" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi make all-am make[4]: Entering directory '/build/meep-openmpi-1.17.1/python' /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o _meep_la-meep-python.lo `test -f 'meep-python.cxx' || echo './'`meep-python.cxx libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cxx -fPIC -DPIC -o .libs/_meep_la-meep-python.o In file included from meep-python.cxx:3508: typemap_utils.cpp: In function 'PyObject* py_volume_object()': typemap_utils.cpp:102:15: warning: unused variable 'geom_mod' [-Wunused-variable] 102 | PyObject *geom_mod = get_geom_mod(); | ^~~~~~~~ typemap_utils.cpp: In function 'int get_attr_material(PyObject*, meep_geom::material_data**)': typemap_utils.cpp:313:7: warning: variable 'rval' set but not used [-Wunused-but-set-variable] 313 | int rval = 1; | ^~~~ typemap_utils.cpp: In function 'int pymaterial_grid_to_material_grid(PyObject*, meep_geom::material_data*)': typemap_utils.cpp:459:68: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] 459 | default: meep::abort("Invalid material grid enumeration code: %d.\n", gt_enum); | ~^ ~~~~~~~ | | | | int long int | %ld meep-python.cxx: In function 'void _get_gradient(PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*)': meep-python.cxx:4598:5: warning: passing NULL to non-pointer argument 4 of 'int SWIG_Python_ConvertPtrAndOwn(PyObject*, void**, swig_type_info*, int, int*)' [-Wconversion-null] 4598 | SWIG_ConvertPtr(swigobj,&where,NULL,NULL); | ^~~~~~~~~~~~~~~ meep-python.cxx:2100:81: note: declared here 2100 | SWIG_Python_ConvertPtrAndOwn(PyObject *obj, void **ptr, swig_type_info *ty, int flags, int *own) { | ~~~~^~~~~ meep-python.cxx:4607:90: warning: format '%d' expects argument of type 'int', but argument 2 has type 'npy_intp' {aka 'long int'} [-Wformat=] 4607 | if (PyArray_DIMS(pao_grad)[0] != nf) meep::abort("Numpy grad array is allocated for %d frequencies; it should be allocated for %d.",PyArray_DIMS(pao_grad)[0],nf); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int npy_intp {aka long int} | %ld meep-python.cxx:4618:5: warning: passing NULL to non-pointer argument 4 of 'int SWIG_Python_ConvertPtrAndOwn(PyObject*, void**, swig_type_info*, int, int*)' [-Wconversion-null] 4618 | SWIG_ConvertPtr(f,&f_v,NULL,NULL); | ^~~~~~~~~~~~~~~ meep-python.cxx:2100:81: note: declared here 2100 | SWIG_Python_ConvertPtrAndOwn(PyObject *obj, void **ptr, swig_type_info *ty, int flags, int *own) { | ~~~~^~~~~ meep-python.cxx: In function 'void std_vector_Sl_meep_volume_Sg____setitem____SWIG_2(std::vector*, std::vector::difference_type, const value_type&)': meep-python.cxx:6164:33: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 6164 | *(swig::getpos(self,i)) = x; | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_signed_direction___mul__(PyObject*, PyObject*)': meep-python.cxx:21799:39: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 21799 | result = (arg1)->operator *(arg2); | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_flip(PyObject*, PyObject*)': meep-python.cxx:22231:15: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 22231 | arg1 = *temp; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx:22237:31: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 22237 | result = meep::flip(arg1); | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_abort__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:22389:103: warning: unused parameter 'varargs' [-Wunused-parameter] 22389 | SWIGINTERN PyObject *_wrap_abort__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_symmetry_transform__SWIG_0(PyObject*, PyObject*)': meep-python.cxx:33158:67: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 33158 | result = ((meep::symmetry const *)arg1)->transform(arg2,arg3); | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_volume_list_v_set(PyObject*, PyObject*)': meep-python.cxx:34610:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 34610 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_structure_chunk_v_set(PyObject*, PyObject*)': meep-python.cxx:43451:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 43451 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_structure_v_set(PyObject*, PyObject*)': meep-python.cxx:46966:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 46966 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_flux_where_set(PyObject*, PyObject*)': meep-python.cxx:62085:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 62085 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_energy_where_set(PyObject*, PyObject*)': meep-python.cxx:63999:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 63999 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_force_where_set(PyObject*, PyObject*)': meep-python.cxx:65641:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 65641 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_near2far_where_set(PyObject*, PyObject*)': meep-python.cxx:67996:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 67996 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_fields_where_set(PyObject*, PyObject*)': meep-python.cxx:69224:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 69224 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_fields_chunk_v_set(PyObject*, PyObject*)': meep-python.cxx:70839:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 70839 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_fields_v_set(PyObject*, PyObject*)': meep-python.cxx:74115:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 74115 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114035:111: warning: unused parameter 'varargs' [-Wunused-parameter] 114035 | SWIGINTERN PyObject *_wrap_master_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf_stderr__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114081:118: warning: unused parameter 'varargs' [-Wunused-parameter] 114081 | SWIGINTERN PyObject *_wrap_master_printf_stderr__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_debug_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114127:110: warning: unused parameter 'varargs' [-Wunused-parameter] 114127 | SWIGINTERN PyObject *_wrap_debug_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_fprintf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114173:112: warning: unused parameter 'varargs' [-Wunused-parameter] 114173 | SWIGINTERN PyObject *_wrap_master_fprintf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In instantiation of 'void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector; Difference = long int; InputSeq = std::vector; Py_ssize_t = long int]': meep-python.cxx:6105:97: required from here meep-python.cxx:5155:17: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 5155 | *it++ = *isit++; | ~~~~~~^~~~~~~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx:5171:15: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 5171 | *it++ = *isit++; | ~~~~~~^~~~~~~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ In file included from meep-python.cxx:3508: typemap_utils.cpp: In function 'PyObject* gobj_to_py_obj(geometric_object*)': typemap_utils.cpp:1003:18: warning: control reaches end of non-void function [-Wreturn-type] 1003 | meep::abort("Conversion of non-prism geometric_object to Python is not supported"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ typemap_utils.cpp: In function 'PyObject* material_to_py_material(meep_geom::material_type)': typemap_utils.cpp:704:18: warning: control reaches end of non-void function [-Wreturn-type] 704 | meep::abort("Can only convert C++ medium_struct to Python"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ typemap_utils.cpp: At global scope: typemap_utils.cpp:98:18: warning: 'PyObject* py_volume_object()' defined but not used [-Wunused-function] 98 | static PyObject *py_volume_object() { | ^~~~~~~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_direction_component(PyObject*, PyObject*)': meep-python.cxx:778:42: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 778 | #define PyInt_FromLong(x) PyLong_FromLong(x) | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp: In function 'PyObject* _wrap_field_type_component(PyObject*, PyObject*)': ../src/meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_cycle_component(PyObject*, PyObject*)': meep-python.cxx:778:42: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 778 | #define PyInt_FromLong(x) PyLong_FromLong(x) | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ In file included from meep-python.cxx:3508: typemap_utils.cpp: In function 'int pymaterial_to_material(PyObject*, meep_geom::material_data**)': typemap_utils.cpp:565:7: warning: 'md' may be used uninitialized in this function [-Wmaybe-uninitialized] 565 | *mt = md; | ~~~~^~~~ meep-python.cxx: In function 'void _get_gradient(PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*)': meep-python.cxx:4622:42: warning: 'f_v' may be used uninitialized in this function [-Wmaybe-uninitialized] 4622 | meep_geom::material_grids_addgradient(grad_c,ng,fields_a_c,fields_f_c,frequencies_c,nf,scalegrad,*where_vol,geometry_tree,f_c); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep-python.cxx:4614:49: warning: 'where' may be used uninitialized in this function [-Wmaybe-uninitialized] 4614 | geom_box_tree geometry_tree = calculate_tree(*where_vol,*l); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cxx -fPIC -DPIC -o _meep_la-meep-python.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 23:1:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.9/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/10/crtbeginS.o .libs/_meep_la-meep-python.o -Wl,-rpath -Wl,/build/meep-openmpi-1.17.1/src/.libs ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/10/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,_meep.so.23 -o .libs/_meep.so.23.0.1 libtool: link: (cd ".libs" && rm -f "_meep.so.23" && ln -s "_meep.so.23.0.1" "_meep.so.23") libtool: link: (cd ".libs" && rm -f "_meep.so" && ln -s "_meep.so.23.0.1" "_meep.so") libtool: link: aarch64-linux-gnu-ar cr .libs/_meep.a _meep_la-meep-python.o libtool: link: aarch64-linux-gnu-ranlib .libs/_meep.a libtool: link: ( cd ".libs" && rm -f "_meep.la" && ln -s "../_meep.la" "_meep.la" ) mkdir -p meep cp __init__.py ./geom.py ./simulation.py ./source.py ./visualization.py ./materials.py ./verbosity_mgr.py .libs/_meep.so meep make[4]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[3]: Entering directory '/build/meep-openmpi-1.17.1' cp -f ./meep-pkgconfig meep.pc make[3]: Leaving directory '/build/meep-openmpi-1.17.1' make[2]: Leaving directory '/build/meep-openmpi-1.17.1' make[1]: Leaving directory '/build/meep-openmpi-1.17.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/meep-openmpi-1.17.1' echo if [ "" = "armel" ] || \ [ "" = "riscv64" ] || \ [ "" = "mipsel" ] || \ [ "" = "mips64el" ] || \ [ "" = "hurd-i386" ] ; then \ echo "Do not make tests on this architecture" ;\ else \ echo "Do make tests on this architecture" ;\ make check; \ find; \ cat tests/test-suite.log; \ fi Do make tests on this architecture make[2]: Entering directory '/build/meep-openmpi-1.17.1' Making check in src make[3]: Entering directory '/build/meep-openmpi-1.17.1/src' make check-recursive make[4]: Entering directory '/build/meep-openmpi-1.17.1/src' Making check in support make[5]: Entering directory '/build/meep-openmpi-1.17.1/src/support' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/meep-openmpi-1.17.1/src/support' make[5]: Entering directory '/build/meep-openmpi-1.17.1/src' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/meep-openmpi-1.17.1/src' make[4]: Leaving directory '/build/meep-openmpi-1.17.1/src' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/src' Making check in tests make[3]: Entering directory '/build/meep-openmpi-1.17.1/tests' make aniso_disp bench bragg_transmission convergence_cyl_waveguide cylindrical flux harmonics integrate known_results near2far one_dimensional physical stress_tensor symmetry three_d two_dimensional 2D_convergence h5test pml pw-source-ll ring-ll cyl-ellipsoid-ll absorber-1d-ll array-slice-ll user-defined-material dft-fields gdsII-3d bend-flux-ll array-metadata make[4]: Entering directory '/build/meep-openmpi-1.17.1/tests' mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o aniso_disp.o aniso_disp.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o aniso_disp aniso_disp.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/aniso_disp aniso_disp.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bench.o bench.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o bench bench.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/bench bench.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bragg_transmission.o bragg_transmission.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o bragg_transmission bragg_transmission.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/bragg_transmission bragg_transmission.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 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user-defined-material.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/user-defined-material user-defined-material.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib 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-DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o gdsII-3d.o gdsII-3d.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o gdsII-3d gdsII-3d.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/gdsII-3d gdsII-3d.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bend-flux-ll.o bend-flux-ll.cpp bend-flux-ll.cpp: In function 'meep::structure create_structure_from_GDSII(char*, bool, meep::volume&, meep::volume&, meep::volume&)': bend-flux-ll.cpp:70:61: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 70 | vsrc = meep_geom::get_GDSII_volume(GDSIIFile, SOURCE_LAYER); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:71:61: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 71 | vrefl = meep_geom::get_GDSII_volume(GDSIIFile, RFLUX_LAYER); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:73:97: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 73 | meep_geom::get_GDSII_volume(GDSIIFile, (no_bend ? STRAIGHT_TFLUX_LAYER : BENT_TFLUX_LAYER)); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp: In function 'meep::structure create_structure_by_hand(bool, bool, meep::volume&, meep::volume&, meep::volume&)': bend-flux-ll.cpp:174:98: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 174 | volume(vec(-0.5 * sx + dpml, wvg_ycen - 0.5 * w), vec(-0.5 * sx + dpml, wvg_ycen + 0.5 * w)); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:175:88: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 175 | vrefl = volume(vec(-0.5 * sx + 1.5, wvg_ycen - w), vec(-0.5 * sx + 1.5, wvg_ycen + w)); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:177:99: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 177 | : volume(vec(wvg_xcen - w, 0.5 * sy - 1.5), vec(wvg_xcen + w, 0.5 * sy - 1.5))); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o bend-flux-ll bend-flux-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/bend-flux-ll bend-flux-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas 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-lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o .libs/array-metadata array-metadata.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-openmpi-1.17.1/tests' make check-TESTS make[4]: Entering directory '/build/meep-openmpi-1.17.1/tests' make[5]: Entering directory '/build/meep-openmpi-1.17.1/tests' PASS: aniso_disp PASS: bench PASS: bragg_transmission PASS: convergence_cyl_waveguide PASS: cylindrical PASS: flux PASS: harmonics PASS: integrate PASS: known_results PASS: near2far PASS: one_dimensional PASS: physical PASS: stress_tensor PASS: symmetry PASS: three_d PASS: two_dimensional PASS: 2D_convergence PASS: h5test PASS: pml ============================================================================ Testsuite summary for meep 1.17.1 ============================================================================ # TOTAL: 19 # PASS: 19 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/meep-openmpi-1.17.1/tests' make[4]: Leaving directory '/build/meep-openmpi-1.17.1/tests' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/tests' Making check in scheme make[3]: Entering directory '/build/meep-openmpi-1.17.1/scheme' make check-am make[4]: Entering directory '/build/meep-openmpi-1.17.1/scheme' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/meep-openmpi-1.17.1/scheme' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/scheme' Making check in python make[3]: Entering directory '/build/meep-openmpi-1.17.1/python' make check-am make[4]: Entering directory '/build/meep-openmpi-1.17.1/python' make check-TESTS make[5]: Entering directory '/build/meep-openmpi-1.17.1/python' make[6]: Entering directory '/build/meep-openmpi-1.17.1/python' FAIL: tests/3rd_harm_1d.py FAIL: tests/absorber_1d.py FAIL: tests/antenna_radiation.py FAIL: tests/array_metadata.py FAIL: tests/bend_flux.py FAIL: tests/cavity_arrayslice.py FAIL: tests/cavity_farfield.py FAIL: tests/chunks.py FAIL: tests/cyl_ellipsoid.py FAIL: tests/dft_energy.py FAIL: tests/dft_fields.py FAIL: tests/divide_mpi_processes.py FAIL: tests/eigfreq.py FAIL: tests/faraday_rotation.py FAIL: tests/field_functions.py FAIL: tests/force.py FAIL: tests/fragment_stats.py FAIL: tests/gaussianbeam.py FAIL: tests/geom.py FAIL: tests/get_point.py FAIL: tests/holey_wvg_bands.py FAIL: tests/holey_wvg_cavity.py FAIL: tests/ldos.py PASS: tests/material_grid.py PASS: tests/medium_evaluations.py FAIL: tests/multilevel_atom.py FAIL: tests/n2f_periodic.py FAIL: tests/oblique_source.py FAIL: tests/physical.py FAIL: tests/prism.py FAIL: tests/pw_source.py FAIL: tests/refl_angular.py FAIL: tests/ring.py FAIL: tests/ring_cyl.py FAIL: tests/simulation.py FAIL: tests/special_kz.py FAIL: tests/source.py FAIL: tests/user_defined_material.py FAIL: tests/visualization.py ============================================================================ Testsuite summary for meep 1.17.1 ============================================================================ # TOTAL: 39 # PASS: 2 # SKIP: 0 # XFAIL: 0 # FAIL: 37 # XPASS: 0 # ERROR: 0 ============================================================================ See python/test-suite.log ============================================================================ make[6]: *** [Makefile:1081: test-suite.log] Error 1 make[6]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[5]: *** [Makefile:1189: check-TESTS] Error 2 make[5]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[4]: *** [Makefile:1255: check-am] Error 2 make[4]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[3]: *** [Makefile:1257: check] Error 2 make[3]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[2]: *** [Makefile:508: check-recursive] Error 1 make[2]: Leaving directory '/build/meep-openmpi-1.17.1' . ./meep.pc ./libtool ./stamp-h1 ./config.h ./meep-pkgconfig ./Makefile ./config.status ./config.log 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./doc/docs/FAQ.md ./doc/docs/Exploiting_Symmetry.md ./doc/docs/Eigensolver_Math.md ./doc/docs/Download.md ./doc/docs/Developer_Codes ./doc/docs/Developer_Codes/WriteChunkInfo.cpp ./doc/docs/Developer_Codes/Makefile.manual ./doc/docs/Chunks_and_Symmetry.md ./doc/docs/C++_Tutorial.md ./doc/docs/C++_Developer_Information.md ./doc/docs/Build_From_Source.md ./doc/docs/Acknowledgements.md ./doc/docs/2d_Cell_Special_kz.md ./doc/_api_snippets ./doc/_api_snippets/method_template.md ./doc/_api_snippets/function_template.md ./doc/_api_snippets/class_template.md ./doc/README.md ./contrib ./contrib/build-meep.sh ./configure.ac ./codemeta.json ./autogen.sh ./TODO ./README.md ./NEWS.md ./Makefile.am ./LICENSE ./COPYRIGHT ./AUTHORS ./.travis.yml ./.mailmap ./.gitignore ./.gitattributes ./.clang-format ======================================= meep 1.17.1: tests/test-suite.log ======================================= # TOTAL: 19 # PASS: 19 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 .. contents:: :depth: 2 make[1]: Leaving directory '/build/meep-openmpi-1.17.1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with autoreconf dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/meep-openmpi-1.17.1' dh_installchangelogs NEWS.md dh_auto_install make -j1 install DESTDIR=/build/meep-openmpi-1.17.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/meep-openmpi-1.17.1' Making install in src make[3]: Entering directory '/build/meep-openmpi-1.17.1/src' make install-recursive make[4]: Entering directory '/build/meep-openmpi-1.17.1/src' Making install in support make[5]: Entering directory '/build/meep-openmpi-1.17.1/src/support' make[6]: Entering directory '/build/meep-openmpi-1.17.1/src/support' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/meep-openmpi-1.17.1/src/support' make[5]: Leaving directory '/build/meep-openmpi-1.17.1/src/support' make[5]: Entering directory '/build/meep-openmpi-1.17.1/src' make[6]: Entering directory '/build/meep-openmpi-1.17.1/src' /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libmeep.la '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libmeep.so.23.0.1 /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.so.23.0.1 libtool: install: (cd /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libmeep.so.23.0.1 libmeep.so.23 || { rm -f libmeep.so.23 && ln -s libmeep.so.23.0.1 libmeep.so.23; }; }) libtool: install: (cd /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libmeep.so.23.0.1 libmeep.so || { rm -f libmeep.so && ln -s libmeep.so.23.0.1 libmeep.so; }; }) libtool: install: /usr/bin/install -c .libs/libmeep.lai /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.la libtool: install: /usr/bin/install -c .libs/libmeep.a /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.a libtool: install: chmod 644 /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.a libtool: install: aarch64-linux-gnu-ranlib /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 meep.hpp '/build/meep-openmpi-1.17.1/debian/tmp/usr/include' /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 meep/mympi.hpp meep/vec.hpp meepgeom.hpp material_data.hpp adjust_verbosity.hpp '/build/meep-openmpi-1.17.1/debian/tmp/usr/include/meep' make[6]: Leaving directory '/build/meep-openmpi-1.17.1/src' make[5]: Leaving directory '/build/meep-openmpi-1.17.1/src' make[4]: Leaving directory '/build/meep-openmpi-1.17.1/src' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/src' Making install in tests make[3]: Entering directory '/build/meep-openmpi-1.17.1/tests' make[4]: Entering directory '/build/meep-openmpi-1.17.1/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meep-openmpi-1.17.1/tests' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/tests' Making install in scheme make[3]: Entering directory '/build/meep-openmpi-1.17.1/scheme' make install-am make[4]: Entering directory '/build/meep-openmpi-1.17.1/scheme' make[5]: Entering directory '/build/meep-openmpi-1.17.1/scheme' /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/bin' /bin/sh ../libtool --mode=install /usr/bin/install -c meep '/build/meep-openmpi-1.17.1/debian/tmp/usr/bin' libtool: warning: '../src/libmeep.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/meep /build/meep-openmpi-1.17.1/debian/tmp/usr/bin/meep /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/share/meep' /usr/bin/install -c -m 644 meep.scm meep-enums.scm casimir.scm materials.scm '/build/meep-openmpi-1.17.1/debian/tmp/usr/share/meep' make[5]: Leaving directory '/build/meep-openmpi-1.17.1/scheme' make[4]: Leaving directory '/build/meep-openmpi-1.17.1/scheme' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/scheme' Making install in python make[3]: Entering directory '/build/meep-openmpi-1.17.1/python' make install-am make[4]: Entering directory '/build/meep-openmpi-1.17.1/python' make[5]: Entering directory '/build/meep-openmpi-1.17.1/python' /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' /bin/sh ../libtool --mode=install /usr/bin/install -c _meep.la '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' libtool: warning: relinking '_meep.la' libtool: install: (cd /build/meep-openmpi-1.17.1/python; /bin/sh "/build/meep-openmpi-1.17.1/libtool" --tag CXX --mode=relink mpic++ -g -O2 -fdebug-prefix-map=/build/meep-openmpi-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 23:1:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.9/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -inst-prefix-dir /build/meep-openmpi-1.17.1/debian/tmp) libtool: relink: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/10/crtbeginS.o .libs/_meep_la-meep-python.o -L/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -lmeep -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/10/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/10/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/10/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/10/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,_meep.so.23 -o .libs/_meep.so.23.0.1 libtool: install: /usr/bin/install -c .libs/_meep.so.23.0.1T /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so.23.0.1 libtool: install: (cd /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep && { ln -s -f _meep.so.23.0.1 _meep.so.23 || { rm -f _meep.so.23 && ln -s _meep.so.23.0.1 _meep.so.23; }; }) libtool: install: (cd /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep && { ln -s -f _meep.so.23.0.1 _meep.so || { rm -f _meep.so && ln -s _meep.so.23.0.1 _meep.so; }; }) libtool: install: /usr/bin/install -c .libs/_meep.lai /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.la libtool: install: /usr/bin/install -c .libs/_meep.a /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: install: chmod 644 /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: install: aarch64-linux-gnu-ranlib /build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: warning: remember to run 'libtool --finish /usr/lib/python3.9/site-packages/meep' /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint' /usr/bin/install -c -m 644 ./adjoint/__init__.py ./adjoint/basis.py ./adjoint/objective.py ./adjoint/optimization_problem.py ./adjoint/filters.py ./adjoint/filter_source.py '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint' Byte-compiling python modules... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.py Byte-compiling python modules (optimized versions) ... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.py /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' /usr/bin/install -c -m 644 __init__.py ./geom.py ./simulation.py ./source.py ./visualization.py ./materials.py ./verbosity_mgr.py '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' Byte-compiling python modules... __init__.pygeom.pysimulation.pysource.pyvisualization.pymaterials.pyverbosity_mgr.py Byte-compiling python modules (optimized versions) ... __init__.pygeom.pysimulation.pysource.pyvisualization.pymaterials.pyverbosity_mgr.py make install-data-hook make[6]: Entering directory '/build/meep-openmpi-1.17.1/python' make[6]: Nothing to be done for 'install-data-hook'. make[6]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[5]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[4]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[3]: Leaving directory '/build/meep-openmpi-1.17.1/python' make[3]: Entering directory '/build/meep-openmpi-1.17.1' make[4]: Entering directory '/build/meep-openmpi-1.17.1' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 meep.pc '/build/meep-openmpi-1.17.1/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' make[4]: Leaving directory '/build/meep-openmpi-1.17.1' make[3]: Leaving directory '/build/meep-openmpi-1.17.1' make[2]: Leaving directory '/build/meep-openmpi-1.17.1' find . ./meep.pc ./libtool ./stamp-h1 ./config.h ./meep-pkgconfig ./Makefile ./config.status ./config.log ./test-driver ./depcomp ./py-compile ./Makefile.in ./missing ./install-sh ./config.sub ./config.guess ./compile ./config.h.in ./configure ./aclocal.m4 ./ltmain.sh ./autom4te.cache ./autom4te.cache/output.1 ./autom4te.cache/traces.1 ./autom4te.cache/output.2 ./autom4te.cache/traces.2 ./autom4te.cache/output.0 ./autom4te.cache/traces.0 ./autom4te.cache/requests ./.pc ./.pc/applied-patches ./.pc/.quilt_series ./.pc/.quilt_patches ./.pc/.version ./debian ./debian/tmp ./debian/tmp/usr ./debian/tmp/usr/share ./debian/tmp/usr/share/meep ./debian/tmp/usr/share/meep/materials.scm ./debian/tmp/usr/share/meep/casimir.scm ./debian/tmp/usr/share/meep/meep-enums.scm ./debian/tmp/usr/share/meep/meep.scm ./debian/tmp/usr/bin ./debian/tmp/usr/bin/meep ./debian/tmp/usr/include ./debian/tmp/usr/include/meep ./debian/tmp/usr/include/meep/adjust_verbosity.hpp ./debian/tmp/usr/include/meep/material_data.hpp ./debian/tmp/usr/include/meep/meepgeom.hpp ./debian/tmp/usr/include/meep/vec.hpp ./debian/tmp/usr/include/meep/mympi.hpp ./debian/tmp/usr/include/meep.hpp ./debian/tmp/usr/lib ./debian/tmp/usr/lib/python3.9 ./debian/tmp/usr/lib/python3.9/site-packages ./debian/tmp/usr/lib/python3.9/site-packages/meep ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__ ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/verbosity_mgr.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/materials.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/visualization.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/source.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/simulation.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/geom.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/__init__.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/verbosity_mgr.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/materials.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/visualization.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/source.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/simulation.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/geom.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/__init__.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/verbosity_mgr.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/materials.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/visualization.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/source.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/simulation.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/geom.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/__init__.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__ ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filter_source.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filters.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/objective.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/basis.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/__init__.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filter_source.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filters.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/objective.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/basis.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/__init__.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/filter_source.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/filters.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/optimization_problem.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/objective.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/basis.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__init__.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.la ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so.23 ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so.23.0.1 ./debian/tmp/usr/lib/aarch64-linux-gnu ./debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig ./debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/meep.pc ./debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.a ./debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.la ./debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.so ./debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.so.23 ./debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.so.23.0.1 ./debian/python3-meep-openmpi.debhelper.log ./debian/libmeep-openmpi-dev.debhelper.log ./debian/libmeep-openmpi23.debhelper.log ./debian/meep-openmpi.debhelper.log ./debian/python3-meep-openmpi ./debian/python3-meep-openmpi/usr ./debian/python3-meep-openmpi/usr/share ./debian/python3-meep-openmpi/usr/share/doc ./debian/python3-meep-openmpi/usr/share/doc/python3-meep-openmpi ./debian/python3-meep-openmpi/usr/share/doc/python3-meep-openmpi/changelog ./debian/python3-meep-openmpi/usr/share/doc/python3-meep-openmpi/changelog.Debian ./debian/meep-openmpi ./debian/meep-openmpi/usr ./debian/meep-openmpi/usr/share ./debian/meep-openmpi/usr/share/doc ./debian/meep-openmpi/usr/share/doc/meep-openmpi ./debian/meep-openmpi/usr/share/doc/meep-openmpi/changelog ./debian/meep-openmpi/usr/share/doc/meep-openmpi/changelog.Debian ./debian/libmeep-openmpi23 ./debian/libmeep-openmpi23/usr ./debian/libmeep-openmpi23/usr/share ./debian/libmeep-openmpi23/usr/share/doc ./debian/libmeep-openmpi23/usr/share/doc/libmeep-openmpi23 ./debian/libmeep-openmpi23/usr/share/doc/libmeep-openmpi23/changelog ./debian/libmeep-openmpi23/usr/share/doc/libmeep-openmpi23/changelog.Debian ./debian/libmeep-openmpi-dev ./debian/libmeep-openmpi-dev/usr ./debian/libmeep-openmpi-dev/usr/share ./debian/libmeep-openmpi-dev/usr/share/doc ./debian/libmeep-openmpi-dev/usr/share/doc/libmeep-openmpi-dev ./debian/libmeep-openmpi-dev/usr/share/doc/libmeep-openmpi-dev/changelog ./debian/libmeep-openmpi-dev/usr/share/doc/libmeep-openmpi-dev/changelog.Debian ./debian/debhelper-build-stamp ./debian/autoreconf.after ./debian/autoreconf.before ./debian/watch ./debian/source ./debian/source/lintian-overrides ./debian/source/format ./debian/rules ./debian/python3-meep-openmpi.prerm ./debian/python3-meep-openmpi.postinst ./debian/python3-meep-openmpi.install ./debian/patches ./debian/patches/series ./debian/meep-openmpi.manpages ./debian/meep-openmpi.install ./debian/meep-openmpi.docs ./debian/meep-openmpi.1 ./debian/libmeep-openmpi23.lintian-overrides ./debian/libmeep-openmpi23.install ./debian/libmeep-openmpi-dev.install ./debian/docs ./debian/copyright ./debian/control ./debian/changelog ./debian/README.source ./version.sh ./tests ./tests/test-suite.log ./tests/pml.trs ./tests/pml.log ./tests/h5test.trs ./tests/h5test.log ./tests/2D_convergence.trs ./tests/2D_convergence.log ./tests/two_dimensional.trs ./tests/two_dimensional.log ./tests/three_d.trs ./tests/three_d.log ./tests/symmetry.trs ./tests/symmetry.log ./tests/stress_tensor.trs ./tests/stress_tensor.log ./tests/physical.trs ./tests/physical.log ./tests/one_dimensional.trs ./tests/one_dimensional.log ./tests/near2far.trs ./tests/near2far.log ./tests/known_results.trs ./tests/known_results.log ./tests/integrate.trs ./tests/integrate.log ./tests/harmonics.trs ./tests/harmonics.log ./tests/flux.trs ./tests/flux.log ./tests/cylindrical.trs ./tests/cylindrical.log ./tests/convergence_cyl_waveguide.trs ./tests/convergence_cyl_waveguide.log ./tests/bragg_transmission.trs ./tests/bragg_transmission.log ./tests/bench.trs ./tests/bench.log ./tests/aniso_disp.trs ./tests/aniso_disp.log ./tests/array-metadata ./tests/array-metadata.o ./tests/bend-flux-ll ./tests/bend-flux-ll.o ./tests/gdsII-3d ./tests/gdsII-3d.o ./tests/dft-fields ./tests/dft-fields.o ./tests/user-defined-material ./tests/user-defined-material.o ./tests/array-slice-ll ./tests/array-slice-ll.o ./tests/absorber-1d-ll ./tests/absorber-1d-ll.o ./tests/cyl-ellipsoid-ll ./tests/cyl-ellipsoid-ll.o ./tests/ring-ll ./tests/ring-ll.o ./tests/pw-source-ll ./tests/pw-source-ll.o ./tests/pml ./tests/pml.o ./tests/h5test ./tests/h5test.o ./tests/2D_convergence ./tests/2D_convergence.o ./tests/two_dimensional ./tests/two_dimensional.o ./tests/three_d ./tests/three_d.o ./tests/symmetry ./tests/symmetry.o ./tests/stress_tensor ./tests/stress_tensor.o ./tests/physical ./tests/physical.o ./tests/one_dimensional ./tests/one_dimensional.o ./tests/near2far ./tests/near2far.o ./tests/known_results ./tests/known_results.o ./tests/integrate ./tests/integrate.o ./tests/harmonics ./tests/harmonics.o ./tests/flux ./tests/flux.o ./tests/cylindrical ./tests/cylindrical.o ./tests/convergence_cyl_waveguide ./tests/convergence_cyl_waveguide.o ./tests/bragg_transmission ./tests/bragg_transmission.o ./tests/bench ./tests/bench.o ./tests/aniso_disp ./tests/.libs ./tests/.libs/array-metadata ./tests/.libs/bend-flux-ll ./tests/.libs/gdsII-3d ./tests/.libs/dft-fields ./tests/.libs/user-defined-material ./tests/.libs/array-slice-ll ./tests/.libs/absorber-1d-ll ./tests/.libs/cyl-ellipsoid-ll ./tests/.libs/ring-ll ./tests/.libs/pw-source-ll ./tests/.libs/pml ./tests/.libs/h5test ./tests/.libs/2D_convergence ./tests/.libs/two_dimensional ./tests/.libs/three_d ./tests/.libs/symmetry ./tests/.libs/stress_tensor ./tests/.libs/physical ./tests/.libs/one_dimensional ./tests/.libs/near2far ./tests/.libs/known_results ./tests/.libs/integrate ./tests/.libs/harmonics ./tests/.libs/flux ./tests/.libs/cylindrical ./tests/.libs/convergence_cyl_waveguide ./tests/.libs/bragg_transmission ./tests/.libs/bench ./tests/.libs/aniso_disp ./tests/aniso_disp.o ./tests/Makefile ./tests/Makefile.in ./tests/user-defined-material.cpp ./tests/two_dimensional.cpp ./tests/three_d.cpp ./tests/symmetry.cpp ./tests/stress_tensor.cpp ./tests/ring-ll.cpp ./tests/pw-source-ll.cpp ./tests/pml.cpp ./tests/physical.cpp ./tests/one_dimensional.cpp ./tests/near2far.cpp ./tests/known_results.cpp ./tests/integrate.cpp ./tests/harmonics.cpp ./tests/h5test.cpp ./tests/gdsII-3d.gds ./tests/gdsII-3d.cpp ./tests/flux.cpp ./tests/dft-fields.cpp ./tests/cylindrical.cpp ./tests/cyl-ellipsoid.ctl ./tests/cyl-ellipsoid-ll.cpp ./tests/cyl-ellipsoid-eps-ref.h5 ./tests/convergence_cyl_waveguide.cpp ./tests/bragg_transmission.cpp ./tests/bend-flux-ll.cpp ./tests/bench.cpp ./tests/array-slice-ll.cpp ./tests/array-slice-ll-ref.h5 ./tests/array-metadata.cpp ./tests/aniso_disp.cpp ./tests/absorber-1d-ll.cpp ./tests/Makefile.am ./tests/2D_convergence.cpp ./src ./src/libmeep.la ./src/step_generic_stride1.lo ./src/step_generic_stride1.o ./src/step_generic.lo ./src/step_generic.o ./src/vec.lo ./src/vec.o ./src/meepgeom.lo ./src/structure.lo ./src/meepgeom.o ./src/structure.o ./src/GDSIIgeom.lo ./src/GDSIIgeom.o ./src/susceptibility.lo ./src/susceptibility.o ./src/update_pols.lo ./src/update_pols.o ./src/update_eh.lo ./src/update_eh.o ./src/mpb.lo ./src/mpb.o ./src/time.lo ./src/time.o ./src/structure_dump.lo ./src/structure_dump.o ./src/step_db.lo ./src/step_db.o ./src/sources.lo ./src/sources.o ./src/near2far.lo ./src/near2far.o ./src/stress.lo ./src/stress.o ./src/mympi.lo ./src/mympi.o ./src/step.lo ./src/step.o ./src/multilevel-atom.lo ./src/multilevel-atom.o ./src/monitor.lo ./src/monitor.o ./src/integrate2.lo ./src/integrate2.o ./src/output_directory.lo ./src/output_directory.o ./src/random.lo ./src/random.o ./src/h5fields.lo ./src/h5fields.o ./src/initialize.lo ./src/initialize.o ./src/integrate.lo ./src/integrate.o ./src/fields.lo ./src/loop_in_chunks.lo ./src/loop_in_chunks.o ./src/fields.o ./src/h5file.lo ./src/h5file.o ./src/anisotropic_averaging.lo ./src/anisotropic_averaging.o ./src/dft.lo ./src/dft.o ./src/boundaries.lo ./src/boundaries.o ./src/energy_and_flux.lo ./src/energy_and_flux.o ./src/array_slice.lo ./src/array_slice.o ./src/cw_fields.lo ./src/cw_fields.o ./src/dft_ldos.lo ./src/dft_ldos.o ./src/casimir.lo ./src/casimir.o ./src/bicgstab.lo ./src/bicgstab.o ./src/bands.lo ./src/bands.o ./src/sphere-quad.h ./src/sphere_quad ./src/.libs ./src/.libs/libmeep.la ./src/.libs/libmeep.lai ./src/.libs/libmeep.a ./src/.libs/libmeep.so ./src/.libs/libmeep.so.23 ./src/.libs/libmeep.so.23.0.1 ./src/.libs/step_generic_stride1.o ./src/.libs/step_generic.o ./src/.libs/meepgeom.o ./src/.libs/vec.o ./src/.libs/GDSIIgeom.o ./src/.libs/structure.o ./src/.libs/update_pols.o ./src/.libs/susceptibility.o ./src/.libs/mpb.o ./src/.libs/update_eh.o ./src/.libs/time.o ./src/.libs/structure_dump.o ./src/.libs/step_db.o ./src/.libs/stress.o ./src/.libs/sources.o ./src/.libs/step.o ./src/.libs/near2far.o ./src/.libs/mympi.o ./src/.libs/multilevel-atom.o ./src/.libs/random.o ./src/.libs/output_directory.o ./src/.libs/monitor.o ./src/.libs/integrate2.o ./src/.libs/h5fields.o ./src/.libs/initialize.o ./src/.libs/integrate.o ./src/.libs/h5file.o ./src/.libs/loop_in_chunks.o ./src/.libs/fields.o ./src/.libs/energy_and_flux.o ./src/.libs/anisotropic_averaging.o ./src/.libs/dft.o ./src/.libs/dft_ldos.o ./src/.libs/array_slice.o ./src/.libs/cw_fields.o ./src/.libs/boundaries.o ./src/.libs/casimir.o ./src/.libs/bicgstab.o ./src/.libs/bands.o ./src/sphere-quad.o ./src/step_generic_stride1.cpp ./src/Makefile ./src/Makefile.in ./src/vec.cpp ./src/update_pols.cpp ./src/update_eh.cpp ./src/time.cpp ./src/susceptibility.cpp ./src/support ./src/support/libsupport.la ./src/support/mt19937ar.lo ./src/support/mt19937ar.o ./src/support/.libs ./src/support/.libs/libsupport.la ./src/support/.libs/libsupport.a ./src/support/.libs/mt19937ar.o ./src/support/Makefile ./src/support/Makefile.in ./src/support/mt19937ar.c ./src/support/meep_mt.h ./src/support/Makefile.am ./src/structure_dump.cpp ./src/structure.cpp ./src/stress.cpp ./src/step_generic.cpp ./src/step_db.cpp ./src/step.cpp ./src/sphere-quad.cpp ./src/sources.cpp ./src/random.cpp ./src/output_directory.cpp ./src/near2far.cpp ./src/mympi.cpp ./src/multilevel-atom.cpp ./src/mpb.cpp ./src/monitor.cpp ./src/meepgeom.hpp ./src/meepgeom.cpp ./src/meep_internals.hpp ./src/meep ./src/meep/vec.hpp ./src/meep/mympi.hpp ./src/meep.hpp ./src/material_data.hpp ./src/loop_in_chunks.cpp ./src/integrate2.cpp ./src/integrate.cpp ./src/initialize.cpp ./src/h5file.cpp ./src/h5fields.cpp ./src/fields.cpp ./src/energy_and_flux.cpp ./src/dft_ldos.cpp ./src/dft.cpp ./src/cw_fields.cpp ./src/casimir.cpp ./src/boundaries.cpp ./src/bicgstab.hpp ./src/bicgstab.cpp ./src/bands.cpp ./src/array_slice.cpp ./src/anisotropic_averaging.cpp ./src/adjust_verbosity.hpp ./src/Makefile.am ./src/GDSIIgeom.cpp ./scheme ./scheme/meep ./scheme/.libs ./scheme/.libs/meep ./scheme/meep-meep_wrap.o ./scheme/meep-structure.o ./scheme/meep-geom.o ./scheme/meep-ctl-io.o ./scheme/meep-meep.o ./scheme/meep-main.o ./scheme/meep_wrap.cxx ./scheme/meep_wrap.cxx.bak ./scheme/meep_wrap.cxx.orig ./scheme/ctl-io.cpp ./scheme/geom.cpp ./scheme/main.cpp ./scheme/meep-enums.scm ./scheme/meep_swig_bug_workaround.i ./scheme/ctl-io.h ./scheme/meep_enum_renames.i ./scheme/meep_renames.i ./scheme/ctl-io.i ./scheme/meep.scm ./scheme/Makefile ./scheme/Makefile.in ./scheme/structure.cpp ./scheme/meep_wrap.patch ./scheme/meep_op_renames.i ./scheme/meep.scm.in ./scheme/meep.i ./scheme/meep.cpp ./scheme/meep-ctl.hpp ./scheme/meep-ctl-swig.hpp ./scheme/meep-ctl-const.hpp ./scheme/materials.scm ./scheme/examples ./scheme/examples/zone-plate.ctl ./scheme/examples/wvg_src.ctl ./scheme/examples/straight-waveguide.ctl ./scheme/examples/stochastic-emitter.ctl ./scheme/examples/solve-cw.ctl ./scheme/examples/ring.ctl ./scheme/examples/ring-cyl.ctl ./scheme/examples/refl-quartz.ctl ./scheme/examples/refl-angular.ctl ./scheme/examples/refl-angular-kz2d.ctl ./scheme/examples/pw-source.ctl ./scheme/examples/polarization_grating.ctl ./scheme/examples/perturbation-theory.ctl ./scheme/examples/perturbation-theory-2d.ctl ./scheme/examples/parallel-wvgs-mpb.ctl ./scheme/examples/parallel-wvgs-force.ctl ./scheme/examples/oblique-source.ctl ./scheme/examples/oblique-planewave.ctl ./scheme/examples/multilevel-atom.ctl ./scheme/examples/mode-decomposition.ctl ./scheme/examples/mode-coeffs.ctl ./scheme/examples/mie-scattering.ctl ./scheme/examples/metasurface_lens_phasemap.ctl ./scheme/examples/metasurface_lens_farfield.ctl ./scheme/examples/metal-cavity-ldos.ctl ./scheme/examples/material-dispersion.ctl ./scheme/examples/holey-wvg-cavity.ctl ./scheme/examples/holey-wvg-bands.ctl ./scheme/examples/group-velocity.ctl ./scheme/examples/gaussian-beam.ctl ./scheme/examples/finite_grating.ctl ./scheme/examples/faraday-rotation.ctl ./scheme/examples/differential-cross-section.ctl ./scheme/examples/cylinder-cross-section.ctl ./scheme/examples/chirped-pulse.ctl ./scheme/examples/cherenkov-radiation.ctl ./scheme/examples/cavity-farfield.ctl ./scheme/examples/binary_grating_phasemap.ctl ./scheme/examples/binary_grating_oblique.ctl ./scheme/examples/binary_grating_n2f.ctl ./scheme/examples/binary_grating.ctl ./scheme/examples/bent-waveguide.ctl ./scheme/examples/bend-flux.ctl ./scheme/examples/antenna-radiation.ctl ./scheme/examples/absorbed-power-density.ctl ./scheme/examples/3rd-harm-1d.ctl ./scheme/casimir.scm ./scheme/Makefile.am ./python ./python/test-suite.log ./python/meep ./python/meep/__pycache__ ./python/meep/__pycache__/materials.cpython-39.pyc ./python/meep/__pycache__/verbosity_mgr.cpython-39.pyc ./python/meep/__pycache__/visualization.cpython-39.pyc ./python/meep/__pycache__/source.cpython-39.pyc ./python/meep/__pycache__/simulation.cpython-39.pyc ./python/meep/__pycache__/geom.cpython-39.pyc ./python/meep/__pycache__/__init__.cpython-39.pyc ./python/meep/_meep.so ./python/meep/verbosity_mgr.py ./python/meep/materials.py ./python/meep/visualization.py ./python/meep/source.py ./python/meep/simulation.py ./python/meep/geom.py ./python/meep/__init__.py ./python/_meep.la ./python/_meep_la-meep-python.lo ./python/_meep_la-meep-python.o ./python/.libs ./python/.libs/_meep.so.23.0.1 ./python/.libs/_meep.so.23.0.1T ./python/.libs/_meep.la ./python/.libs/_meep.lai ./python/.libs/_meep.a ./python/.libs/_meep.so ./python/.libs/_meep.so.23 ./python/.libs/_meep_la-meep-python.o ./python/__init__.py ./python/meep.py ./python/meep-python.cxx ./python/Makefile ./python/Makefile.in ./python/visualization.py ./python/verbosity_mgr.py ./python/vec.i ./python/typemap_utils.cpp ./python/tests ./python/tests/visualization.trs ./python/tests/visualization.log ./python/tests/user_defined_material.trs ./python/tests/user_defined_material.log ./python/tests/source.trs ./python/tests/source.log ./python/tests/special_kz.trs ./python/tests/special_kz.log ./python/tests/simulation.trs ./python/tests/simulation.log ./python/tests/ring_cyl.trs ./python/tests/ring_cyl.log ./python/tests/ring.trs ./python/tests/ring.log ./python/tests/refl_angular.trs ./python/tests/refl_angular.log ./python/tests/pw_source.trs ./python/tests/pw_source.log ./python/tests/prism.trs ./python/tests/prism.log ./python/tests/physical.trs ./python/tests/physical.log ./python/tests/oblique_source.trs ./python/tests/oblique_source.log ./python/tests/n2f_periodic.trs ./python/tests/n2f_periodic.log ./python/tests/multilevel_atom.trs ./python/tests/multilevel_atom.log ./python/tests/medium_evaluations.trs ./python/tests/medium_evaluations.log ./python/tests/material_grid.trs ./python/tests/material_grid.log ./python/tests/ldos.trs ./python/tests/ldos.log ./python/tests/holey_wvg_cavity.trs ./python/tests/holey_wvg_cavity.log ./python/tests/holey_wvg_bands.trs ./python/tests/holey_wvg_bands.log ./python/tests/get_point.trs ./python/tests/get_point.log ./python/tests/geom.trs ./python/tests/geom.log ./python/tests/gaussianbeam.trs ./python/tests/gaussianbeam.log ./python/tests/fragment_stats.trs ./python/tests/fragment_stats.log ./python/tests/force.trs ./python/tests/force.log ./python/tests/field_functions.trs ./python/tests/field_functions.log ./python/tests/faraday_rotation.trs ./python/tests/faraday_rotation.log ./python/tests/eigfreq.trs ./python/tests/eigfreq.log ./python/tests/divide_mpi_processes.trs ./python/tests/divide_mpi_processes.log ./python/tests/dft_fields.trs ./python/tests/dft_fields.log ./python/tests/dft_energy.trs ./python/tests/dft_energy.log ./python/tests/cyl_ellipsoid.trs ./python/tests/cyl_ellipsoid.log ./python/tests/chunks.trs ./python/tests/chunks.log ./python/tests/cavity_farfield.trs ./python/tests/cavity_farfield.log ./python/tests/cavity_arrayslice.trs ./python/tests/cavity_arrayslice.log ./python/tests/bend_flux.trs ./python/tests/__pycache__ ./python/tests/__pycache__/utils.cpython-39.pyc ./python/tests/bend_flux.log ./python/tests/array_metadata.trs ./python/tests/array_metadata.log ./python/tests/antenna_radiation.trs ./python/tests/antenna_radiation.log ./python/tests/absorber_1d.trs ./python/tests/absorber_1d.log ./python/tests/3rd_harm_1d.trs ./python/tests/3rd_harm_1d.log ./python/tests/wvg_src.py ./python/tests/visualization.py ./python/tests/utils.py ./python/tests/user_defined_material.py ./python/tests/test_verbosity_mgr.py ./python/tests/special_kz.py ./python/tests/source.py ./python/tests/simulation.py ./python/tests/ring_cyl.py ./python/tests/ring.py ./python/tests/refl_angular.py ./python/tests/pw_source.py ./python/tests/prism.py ./python/tests/physical.py ./python/tests/oblique_source.py ./python/tests/n2f_periodic.py ./python/tests/multilevel_atom.py ./python/tests/mpb.py ./python/tests/mode_decomposition.py ./python/tests/mode_coeffs.py ./python/tests/medium_evaluations.py ./python/tests/material_grid.py ./python/tests/material_dispersion.py ./python/tests/ldos.py ./python/tests/kdom.py ./python/tests/holey_wvg_cavity.py ./python/tests/holey_wvg_bands.py ./python/tests/get_point.py ./python/tests/geom.py ./python/tests/gaussianbeam.py ./python/tests/fragment_stats.py ./python/tests/force.py ./python/tests/field_functions.py ./python/tests/faraday_rotation.py ./python/tests/eigfreq.py ./python/tests/divide_mpi_processes.py ./python/tests/dispersive_eigenmode.py ./python/tests/diffracted_planewave.py ./python/tests/dft_fields.py ./python/tests/dft_energy.py ./python/tests/data ./python/tests/data/tutorial-tot.rpwr.k16.b08.te.h5 ./python/tests/data/tutorial-te-eigenvectors.h5 ./python/tests/data/tutorial-te-eigenvectors-8-1.h5 ./python/tests/data/tutorial-te-eigenvectors-3-3.h5 ./python/tests/data/tutorial-mu.h5 ./python/tests/data/tutorial-h.k16.b08.te.h5 ./python/tests/data/tutorial-flux.v.k11.b08.te.h5 ./python/tests/data/tutorial-epsilon.h5 ./python/tests/data/tutorial-e.k16.b08.z.tm.h5 ./python/tests/data/tutorial-e.k16.b08.te.h5 ./python/tests/data/tutorial-d.k16.b08.te.h5 ./python/tests/data/tutorial-d.k16.b02.te.h5 ./python/tests/data/tutorial-d.k01.b02.te.h5 ./python/tests/data/tutorial-b.k16.b08.te.h5 ./python/tests/data/tutorial-C.k16.b08.te.h5 ./python/tests/data/tri-rods-epsilon-r-m3-n32.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm-r-m3-n32.h5 ./python/tests/data/subpixel_avg-epsilon.h5 ./python/tests/data/strip-flux.v.k01.b04.x.h5 ./python/tests/data/spiral.gds ./python/tests/data/nonconvex_prism_vertices3.npz ./python/tests/data/nonconvex_prism_vertices2.npz ./python/tests/data/nonconvex_prism_vertices1.npz ./python/tests/data/line-defect-e.k04.b12.z.tm.h5 ./python/tests/data/hole-slab-h.k01.b09.z.zeven.h5 ./python/tests/data/eps_input_file_test.h5 ./python/tests/data/diamond-dpwr.k06.b05.h5 ./python/tests/data/convex_prism_vertices.npz ./python/tests/data/converted-tri-rods-e.k11.b08.tm.h5 ./python/tests/data/converted-diamond-dpwr.k06.b05.h5 ./python/tests/data/cavity_arrayslice_2d.npy ./python/tests/data/cavity_arrayslice_1d.npy ./python/tests/data/cavity-farfield.h5 ./python/tests/data/cavity-farfield-4-freqs.h5 ./python/tests/data/bragg-h.k01.b08.y.tm.h5 ./python/tests/data/bend-flux.gds ./python/tests/data/amp_func_file.h5 ./python/tests/cyl_ellipsoid.py ./python/tests/chunks.py ./python/tests/cavity_farfield.py ./python/tests/cavity_arrayslice.py ./python/tests/binary_grating.py ./python/tests/bend_flux.py ./python/tests/array_metadata.py ./python/tests/antenna_radiation.py ./python/tests/absorber_1d.py ./python/tests/3rd_harm_1d.py ./python/source.py ./python/solver.py ./python/simulation.py ./python/numpy.i ./python/mpb_data.py ./python/mpb.i ./python/meep.i ./python/materials.py ./python/geom.py ./python/examples ./python/examples/zone_plate.py ./python/examples/zone_plate.ipynb ./python/examples/wvg-src.py ./python/examples/straight-waveguide.py ./python/examples/straight-waveguide.ipynb ./python/examples/stochastic_emitter_line.py ./python/examples/stochastic_emitter.py ./python/examples/stochastic_emitter.ipynb ./python/examples/solve-cw.py ./python/examples/solve-cw.ipynb ./python/examples/ring_gds.py ./python/examples/ring.py ./python/examples/ring.ipynb ./python/examples/ring-mode-overlap.py ./python/examples/ring-cyl.py ./python/examples/refl-quartz.py ./python/examples/refl-quartz.ipynb ./python/examples/refl-angular.py ./python/examples/refl-angular.ipynb ./python/examples/refl-angular-kz2d.py ./python/examples/pw-source.py ./python/examples/polarization_grating.py 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./python/examples/mode-decomposition.ipynb ./python/examples/mie_scattering.py ./python/examples/mie_scattering.ipynb ./python/examples/metasurface_lens.py ./python/examples/metasurface_lens.ipynb ./python/examples/metal-cavity-ldos.py ./python/examples/metal-cavity-ldos.ipynb ./python/examples/media ./python/examples/media/visualization_out_plane.mp4 ./python/examples/media/visualization_normalize.mp4 ./python/examples/media/visualization_demo.mp4 ./python/examples/media/visualization_demo.gif ./python/examples/media/straight_waveguide.mp4 ./python/examples/media/ring_simple.mp4 ./python/examples/media/ring_mid.mp4 ./python/examples/media/ring_large.mp4 ./python/examples/media/oblique-source-normal.mp4 ./python/examples/media/oblique-source-eig.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.3175.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.1896.mp4 ./python/examples/media/holey-wvg-bands-0.3-0.8838.mp4 ./python/examples/media/holey-wvg-bands-0.25-0.2506.mp4 ./python/examples/media/holey-wvg-bands-0.1-0.4811.mp4 ./python/examples/media/hole-wvg-cavity.mp4 ./python/examples/media/hole-wvg-cavity-res.mp4 ./python/examples/media/bent_waveguide.mp4 ./python/examples/material-dispersion.py ./python/examples/holey-wvg-cavity.py ./python/examples/holey-wvg-cavity.ipynb ./python/examples/holey-wvg-bands.py ./python/examples/holey-wvg-bands.ipynb ./python/examples/gaussian-beam.py ./python/examples/finite_grating.py ./python/examples/finite_grating.ipynb ./python/examples/faraday-rotation.py ./python/examples/diffracted_planewave.py ./python/examples/differential_cross_section.py ./python/examples/differential_cross_section.ipynb ./python/examples/cylinder_cross_section.py ./python/examples/cylinder_cross_section.ipynb ./python/examples/cyl-ellipsoid.py ./python/examples/coupler.py ./python/examples/coupler.ipynb ./python/examples/coupler.gds ./python/examples/chirped_pulse.py ./python/examples/cherenkov-radiation.py ./python/examples/cavity_arrayslice.py ./python/examples/cavity-farfield.py ./python/examples/cavity-farfield.ipynb ./python/examples/binary_grating_phasemap.py ./python/examples/binary_grating_phasemap.ipynb ./python/examples/binary_grating_oblique.py ./python/examples/binary_grating_oblique.ipynb ./python/examples/binary_grating_n2f.py ./python/examples/binary_grating_n2f.ipynb ./python/examples/binary_grating.py ./python/examples/binary_grating.ipynb ./python/examples/bent-waveguide.py ./python/examples/bent-waveguide.ipynb ./python/examples/bend-flux.py ./python/examples/bend-flux.ipynb ./python/examples/antenna-radiation.py ./python/examples/antenna-radiation.ipynb ./python/examples/adjoint_optimization ./python/examples/adjoint_optimization/Near2Far-Optimization-with-Epigraph-Formulation.ipynb ./python/examples/adjoint_optimization/Fourier Fields Optimization in Waveguide Bend.ipynb ./python/examples/adjoint_optimization/05-Minimax.ipynb ./python/examples/adjoint_optimization/04-Splitter.ipynb ./python/examples/adjoint_optimization/03-Filtered_Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/02-Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/01-Introduction.ipynb ./python/examples/absorber-1d.py ./python/examples/absorbed_power_density.py ./python/examples/absorbed_power_density.ipynb ./python/examples/README.md ./python/examples/3rd-harm-1d.py ./python/examples/3rd-harm-1d.ipynb ./python/adjoint ./python/adjoint/optimization_problem.py ./python/adjoint/objective.py ./python/adjoint/filters.py ./python/adjoint/filter_source.py ./python/adjoint/basis.py ./python/adjoint/__init__.py ./python/Makefile.am ./mkdocs.yml ./meep-pkgconfig.in ./m4 ./m4/lt~obsolete.m4 ./m4/ltversion.m4 ./m4/ltsugar.m4 ./m4/ltoptions.m4 ./m4/libtool.m4 ./m4/pkg.m4 ./m4/ax_openmp.m4 ./m4/ax_gcc_x86_cpuid.m4 ./m4/ax_gcc_archflag.m4 ./m4/ax_cxx_maxopt.m4 ./m4/ax_compiler_vendor.m4 ./m4/ax_check_compiler_flags.m4 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./COPYRIGHT ./AUTHORS ./.travis.yml ./.mailmap ./.gitignore ./.gitattributes ./.clang-format rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyc rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyo rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.a rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.la rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyc rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyo rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.a rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.la rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/__pycache__/ rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/adjoint/__pycache__/ make[1]: Leaving directory '/build/meep-openmpi-1.17.1' dh_install dh_installdocs dh_installchangelogs dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/lib/aarch64-linux-gnu/libmeep.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libmeep-openmpi-dev (4), libmeep-openmpi23 (3), meep-openmpi (1), python3-meep-openmpi (1) * dh_installdocs: libmeep-openmpi-dev (0), libmeep-openmpi23 (0), meep-openmpi (1), python3-meep-openmpi (0) * dh_installman: libmeep-openmpi-dev (0), libmeep-openmpi23 (0), meep-openmpi (1), python3-meep-openmpi (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "aarch64-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: debian/python3-meep-openmpi/usr/lib/python3/dist-packages/meep/_meep.so.23.0.1 contains an unresolvable reference to symbol PySlice_GetIndices: it's probably a plugin dpkg-shlibdeps: warning: 108 other similar warnings have been skipped (use -v to see them all) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'meep-openmpi' in '../meep-openmpi_1.17.1-2_arm64.deb'. dpkg-deb: building package 'python3-meep-openmpi-dbgsym' in '../python3-meep-openmpi-dbgsym_1.17.1-2_arm64.deb'. dpkg-deb: building package 'meep-openmpi-dbgsym' in '../meep-openmpi-dbgsym_1.17.1-2_arm64.deb'. dpkg-deb: building package 'libmeep-openmpi23' in '../libmeep-openmpi23_1.17.1-2_arm64.deb'. dpkg-deb: building package 'libmeep-openmpi23-dbgsym' in '../libmeep-openmpi23-dbgsym_1.17.1-2_arm64.deb'. dpkg-deb: building package 'libmeep-openmpi-dev' in '../libmeep-openmpi-dev_1.17.1-2_arm64.deb'. dpkg-deb: building package 'python3-meep-openmpi' in '../python3-meep-openmpi_1.17.1-2_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../meep-openmpi_1.17.1-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/31785/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/31785/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/31785 and its subdirectories I: Current time: Tue Sep 7 17:01:48 +14 2021 I: pbuilder-time-stamp: 1630983708