I: pbuilder: network access will be disabled during build I: Current time: Fri Aug 20 02:37:11 +14 2021 I: pbuilder-time-stamp: 1629376631 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [mrbayes_3.2.7a-4.dsc] I: copying [./mrbayes_3.2.7a.orig.tar.gz] I: copying [./mrbayes_3.2.7a-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.SrSfE_F5/trustedkeys.kbx': General error gpgv: Signature made Mon Jul 20 21:57:10 2020 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mrbayes_3.2.7a-4.dsc dpkg-source: info: extracting mrbayes in mrbayes-3.2.7a dpkg-source: info: unpacking mrbayes_3.2.7a.orig.tar.gz dpkg-source: info: unpacking mrbayes_3.2.7a-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_rpath.patch dpkg-source: info: applying autoreconf.patch dpkg-source: info: applying no_baseline_violation.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/9988/tmp/hooks/D01_modify_environment starting debug: Running on codethink16-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/9988/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/9988/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/var/lib/jenkins HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=9988 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.RudVPBgPi8/pbuilderrc_lBlp --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.RudVPBgPi8/b2 --logfile b2/build.log mrbayes_3.2.7a-4.dsc' SUDO_GID=117 SUDO_UID=110 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root USERNAME=root _='I: set' http_proxy=http://192.168.101.16:3128 I: uname -a Linux i-capture-the-hostname 4.15.0-154-generic #161-Ubuntu SMP Fri Jul 30 13:01:15 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Aug 5 10:25 bash -rwxr-xr-x 3 root root 34808 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 23 2020 cat -rwxr-xr-x 1 root root 64512 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 23 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 23 2020 chown -rwxr-xr-x 1 root root 138896 Sep 23 2020 cp -rwxr-xr-x 1 root root 129544 Dec 11 2020 dash -rwxr-xr-x 1 root root 101384 Sep 23 2020 date -rwxr-xr-x 1 root root 80984 Sep 23 2020 dd -rwxr-xr-x 1 root root 89824 Sep 23 2020 df -rwxr-xr-x 1 root root 143088 Sep 23 2020 dir -rwxr-xr-x 1 root root 76152 Jul 29 09:09 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 64856 Jul 29 09:09 findmnt -rwsr-xr-x 1 root root 34824 Feb 27 06:12 fusermount -rwxr-xr-x 1 root root 178400 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe -rwxr-xr-x 1 root root 93744 Mar 3 13:30 gzip -rwxr-xr-x 1 root root 18440 Nov 8 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 23 2020 ln -rwxr-xr-x 1 root root 52720 Feb 8 2020 login -rwxr-xr-x 1 root root 143088 Sep 23 2020 ls -rwxr-xr-x 1 root root 161960 Jul 29 09:09 lsblk -rwxr-xr-x 1 root root 85200 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 23 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 51368 Jul 29 09:09 more -rwsr-xr-x 1 root root 51360 Jul 29 09:09 mount -rwxr-xr-x 1 root root 14496 Jul 29 09:09 mountpoint -rwxr-xr-x 1 root root 134808 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Aug 5 10:25 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 23 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 23 2020 rm -rwxr-xr-x 1 root root 43880 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Aug 20 02:37 sh -> bash lrwxrwxrwx 1 root root 4 Aug 16 23:24 sh.distrib -> dash -rwxr-xr-x 1 root root 35656 Sep 23 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 23 2020 stty -rwsr-xr-x 1 root root 67776 Jul 29 09:09 su -rwxr-xr-x 1 root root 35672 Sep 23 2020 sync -rwxr-xr-x 1 root root 535768 Feb 17 2021 tar -rwxr-xr-x 1 root root 10568 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 23 2020 touch -rwxr-xr-x 1 root root 31512 Sep 23 2020 true -rwxr-xr-x 1 root root 14264 Feb 27 06:12 ulockmgr_server -rwsr-xr-x 1 root root 30880 Jul 29 09:09 umount -rwxr-xr-x 1 root root 35640 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress -rwxr-xr-x 1 root root 143088 Sep 23 2020 vdir -rwxr-xr-x 1 root root 59584 Jul 29 09:09 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew I: user script /srv/workspace/pbuilder/9988/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libreadline-dev, mpi-default-dev, libhmsbeagle-dev, autoconf-archive, pkg-config dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libreadline-dev; however: Package libreadline-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libhmsbeagle-dev; however: Package libhmsbeagle-dev is not installed. pbuilder-satisfydepends-dummy depends on autoconf-archive; however: Package autoconf-archive is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} autoconf-archive{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-10{a} groff-base{a} ibverbs-providers{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcbor0{a} libclang-common-11-dev{a} libclang-cpp11{a} libclc-amdgcn{a} libclc-dev{a} libclc-r600{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1{a} libevent-2.1-7{a} libevent-core-2.1-7{a} libevent-dev{a} libevent-extra-2.1-7{a} libevent-openssl-2.1-7{a} libevent-pthreads-2.1-7{a} libexpat1{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libhmsbeagle-dev{a} libhmsbeagle1v5{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu67{a} libjs-jquery{a} libjs-jquery-ui{a} libllvm11{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libncurses-dev{a} libncurses6{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpipeline1{a} libpmix-dev{a} libpmix2{a} librdmacm1{a} libreadline-dev{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libucx0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} mesa-opencl-icd{a} mpi-default-dev{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} po-debconf{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common libarchive-cpio-perl libcoarrays-openmpi-dev libglib2.0-data libgpm2 libmail-sendmail-perl lynx shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 106 newly installed, 0 to remove and 0 not upgraded. Need to get 83.8 MB of archives. After unpacking 430 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-8 [142 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 autoconf-archive all 20190106-2.1 [746 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libmd0 arm64 1.0.3-3 [27.9 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 libbsd0 arm64 0.11.3-1 [106 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 libedit2 arm64 3.1-20191231-2+b1 [92.1 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 libcbor0 arm64 0.5.0+dfsg-2 [20.1 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 libfido2-1 arm64 1.6.0-2 [50.2 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 openssh-client arm64 1:8.4p1-5 [892 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libgfortran-10-dev arm64 10.2.1-6 [388 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 gfortran-10 arm64 10.2.1-6 [8654 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 libnl-3-200 arm64 3.4.0-1+b1 [60.6 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libnl-route-3-200 arm64 3.4.0-1+b1 [149 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 libibverbs1 arm64 33.2-1 [56.1 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 ibverbs-providers arm64 33.2-1 [235 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 libz3-4 arm64 4.8.10-1 [6117 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 libllvm11 arm64 1:11.0.1-2 [14.7 MB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 libclang-common-11-dev arm64 1:11.0.1-2 [3470 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libclang-cpp11 arm64 1:11.0.1-2 [7957 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libclc-dev all 0.2.0+git20190827-8 [26.4 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libclc-amdgcn all 0.2.0+git20190827-8 [2268 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 libclc-r600 all 0.2.0+git20190827-8 [1668 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libdrm-common all 2.4.104-1 [14.9 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libdrm2 arm64 2.4.104-1 [41.3 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 libdrm-amdgpu1 arm64 2.4.104-1 [28.0 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 libdrm-nouveau2 arm64 2.4.104-1 [26.1 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 libdrm-radeon1 arm64 2.4.104-1 [29.3 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 libevent-2.1-7 arm64 2.1.12-stable-1 [176 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 libevent-core-2.1-7 arm64 2.1.12-stable-1 [132 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 libevent-extra-2.1-7 arm64 2.1.12-stable-1 [105 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-1 [57.2 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 libevent-openssl-2.1-7 arm64 2.1.12-stable-1 [63.1 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 libevent-dev arm64 2.1.12-stable-1 [309 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 librdmacm1 arm64 33.2-1 [65.3 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 libfabric1 arm64 1.11.0-2 [389 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 libglib2.0-0 arm64 2.66.8-1 [1286 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 ocl-icd-libopencl1 arm64 2.2.14-2 [41.5 kB] Get: 71 http://deb.debian.org/debian bullseye/main arm64 mesa-opencl-icd arm64 20.3.5-1 [4287 kB] Get: 72 http://deb.debian.org/debian bullseye/main arm64 libhmsbeagle1v5 arm64 3.1.2+dfsg-10 [150 kB] Get: 73 http://deb.debian.org/debian bullseye/main arm64 libhmsbeagle-dev arm64 3.1.2+dfsg-10 [280 kB] Get: 74 http://deb.debian.org/debian bullseye/main arm64 libhwloc15 arm64 2.4.1+dfsg-1 [131 kB] Get: 75 http://deb.debian.org/debian bullseye/main arm64 libnuma1 arm64 2.0.12-1+b1 [25.8 kB] Get: 76 http://deb.debian.org/debian bullseye/main arm64 libnuma-dev arm64 2.0.12-1+b1 [40.2 kB] Get: 77 http://deb.debian.org/debian bullseye/main arm64 libltdl7 arm64 2.4.6-15 [390 kB] Get: 78 http://deb.debian.org/debian bullseye/main arm64 libltdl-dev arm64 2.4.6-15 [162 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libhwloc-dev arm64 2.4.1+dfsg-1 [217 kB] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libpciaccess0 arm64 0.16-1 [52.9 kB] Get: 81 http://deb.debian.org/debian bullseye/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get: 82 http://deb.debian.org/debian bullseye/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 83 http://deb.debian.org/debian bullseye/main arm64 libxcb1 arm64 1.14-3 [138 kB] Get: 84 http://deb.debian.org/debian bullseye/main arm64 libx11-data all 2:1.7.2-1 [311 kB] Get: 85 http://deb.debian.org/debian bullseye/main arm64 libx11-6 arm64 2:1.7.2-1 [748 kB] Get: 86 http://deb.debian.org/debian bullseye/main arm64 libxext6 arm64 2:1.3.3-1.1 [51.6 kB] Get: 87 http://deb.debian.org/debian bullseye/main arm64 libxnvctrl0 arm64 460.91.03-1 [26.7 kB] Get: 88 http://deb.debian.org/debian bullseye/main arm64 libhwloc-plugins arm64 2.4.1+dfsg-1 [21.1 kB] Get: 89 http://deb.debian.org/debian bullseye/main arm64 libnl-3-dev arm64 3.4.0-1+b1 [104 kB] Get: 90 http://deb.debian.org/debian bullseye/main arm64 libnl-route-3-dev arm64 3.4.0-1+b1 [176 kB] Get: 91 http://deb.debian.org/debian bullseye/main arm64 libibverbs-dev arm64 33.2-1 [480 kB] Get: 92 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 93 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 94 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2 [93.2 kB] Get: 95 http://deb.debian.org/debian bullseye/main arm64 libncurses-dev arm64 6.2+20201114-2 [335 kB] Get: 96 http://deb.debian.org/debian bullseye/main arm64 libpmix2 arm64 4.0.0-4.1 [513 kB] Get: 97 http://deb.debian.org/debian bullseye/main arm64 libucx0 arm64 1.10.1~rc1+really.1.10.0-1 [567 kB] Get: 98 http://deb.debian.org/debian bullseye/main arm64 libopenmpi3 arm64 4.1.0-10 [2152 kB] Get: 99 http://deb.debian.org/debian bullseye/main arm64 openmpi-common all 4.1.0-10 [179 kB] Get: 100 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get: 101 http://deb.debian.org/debian bullseye/main arm64 libpmix-dev arm64 4.0.0-4.1 [667 kB] Get: 102 http://deb.debian.org/debian bullseye/main arm64 openmpi-bin arm64 4.1.0-10 [237 kB] Get: 103 http://deb.debian.org/debian bullseye/main arm64 libopenmpi-dev arm64 4.1.0-10 [1192 kB] Get: 104 http://deb.debian.org/debian bullseye/main arm64 libreadline-dev arm64 8.1-1 [153 kB] Get: 105 http://deb.debian.org/debian bullseye/main arm64 mpi-default-dev arm64 1.13 [5476 B] Get: 106 http://deb.debian.org/debian bullseye/main arm64 pkg-config arm64 0.29.2-1 [63.6 kB] Fetched 83.8 MB in 4s (18.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-8_arm64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../001-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../003-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package autoconf-archive. Preparing to unpack .../005-autoconf-archive_20190106-2.1_all.deb ... Unpacking autoconf-archive (20190106-2.1) ... Selecting previously unselected package readline-common. Preparing to unpack .../006-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../007-libreadline8_8.1-1_arm64.deb ... Unpacking libreadline8:arm64 (8.1-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../008-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../009-libmagic-mgc_1%3a5.39-3_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../010-libmagic1_1%3a5.39-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../011-file_1%3a5.39-3_arm64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../012-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libmd0:arm64. Preparing to unpack .../013-libmd0_1.0.3-3_arm64.deb ... Unpacking libmd0:arm64 (1.0.3-3) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../014-libbsd0_0.11.3-1_arm64.deb ... Unpacking libbsd0:arm64 (0.11.3-1) ... Selecting previously unselected package libedit2:arm64. Preparing to unpack .../015-libedit2_3.1-20191231-2+b1_arm64.deb ... Unpacking libedit2:arm64 (3.1-20191231-2+b1) ... Selecting previously unselected package libcbor0:arm64. Preparing to unpack .../016-libcbor0_0.5.0+dfsg-2_arm64.deb ... Unpacking libcbor0:arm64 (0.5.0+dfsg-2) ... Selecting previously unselected package libfido2-1:arm64. Preparing to unpack .../017-libfido2-1_1.6.0-2_arm64.deb ... Unpacking libfido2-1:arm64 (1.6.0-2) ... Selecting previously unselected package openssh-client. Preparing to unpack .../018-openssh-client_1%3a8.4p1-5_arm64.deb ... Unpacking openssh-client (1:8.4p1-5) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../019-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../020-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../021-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../022-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../023-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../024-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../025-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../026-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../027-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../028-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../029-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../030-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../031-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../032-libelf1_0.183-1_arm64.deb ... Unpacking libelf1:arm64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../033-dwz_0.13+20210201-1_arm64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:arm64. Preparing to unpack .../034-libicu67_67.1-7_arm64.deb ... Unpacking libicu67:arm64 (67.1-7) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../035-libxml2_2.9.10+dfsg-6.7_arm64.deb ... Unpacking libxml2:arm64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../036-gettext_0.21-4_arm64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../037-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../038-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../039-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../040-libgfortran5_10.2.1-6_arm64.deb ... Unpacking libgfortran5:arm64 (10.2.1-6) ... Selecting previously unselected package libgfortran-10-dev:arm64. Preparing to unpack .../041-libgfortran-10-dev_10.2.1-6_arm64.deb ... Unpacking libgfortran-10-dev:arm64 (10.2.1-6) ... Selecting previously unselected package gfortran-10. Preparing to unpack .../042-gfortran-10_10.2.1-6_arm64.deb ... Unpacking gfortran-10 (10.2.1-6) ... Selecting previously unselected package libnl-3-200:arm64. Preparing to unpack .../043-libnl-3-200_3.4.0-1+b1_arm64.deb ... Unpacking libnl-3-200:arm64 (3.4.0-1+b1) ... Selecting previously unselected package libnl-route-3-200:arm64. Preparing to unpack .../044-libnl-route-3-200_3.4.0-1+b1_arm64.deb ... Unpacking libnl-route-3-200:arm64 (3.4.0-1+b1) ... Selecting previously unselected package libibverbs1:arm64. Preparing to unpack .../045-libibverbs1_33.2-1_arm64.deb ... Unpacking libibverbs1:arm64 (33.2-1) ... Selecting previously unselected package ibverbs-providers:arm64. Preparing to unpack .../046-ibverbs-providers_33.2-1_arm64.deb ... Unpacking ibverbs-providers:arm64 (33.2-1) ... Selecting previously unselected package libz3-4:arm64. Preparing to unpack .../047-libz3-4_4.8.10-1_arm64.deb ... Unpacking libz3-4:arm64 (4.8.10-1) ... Selecting previously unselected package libllvm11:arm64. Preparing to unpack .../048-libllvm11_1%3a11.0.1-2_arm64.deb ... Unpacking libllvm11:arm64 (1:11.0.1-2) ... Selecting previously unselected package libclang-common-11-dev. Preparing to unpack .../049-libclang-common-11-dev_1%3a11.0.1-2_arm64.deb ... Unpacking libclang-common-11-dev (1:11.0.1-2) ... Selecting previously unselected package libclang-cpp11. Preparing to unpack .../050-libclang-cpp11_1%3a11.0.1-2_arm64.deb ... Unpacking libclang-cpp11 (1:11.0.1-2) ... Selecting previously unselected package libclc-dev. Preparing to unpack .../051-libclc-dev_0.2.0+git20190827-8_all.deb ... Unpacking libclc-dev (0.2.0+git20190827-8) ... Selecting previously unselected package libclc-amdgcn. Preparing to unpack .../052-libclc-amdgcn_0.2.0+git20190827-8_all.deb ... Unpacking libclc-amdgcn (0.2.0+git20190827-8) ... Selecting previously unselected package libclc-r600. Preparing to unpack .../053-libclc-r600_0.2.0+git20190827-8_all.deb ... Unpacking libclc-r600 (0.2.0+git20190827-8) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../054-libdrm-common_2.4.104-1_all.deb ... Unpacking libdrm-common (2.4.104-1) ... Selecting previously unselected package libdrm2:arm64. Preparing to unpack .../055-libdrm2_2.4.104-1_arm64.deb ... Unpacking libdrm2:arm64 (2.4.104-1) ... Selecting previously unselected package libdrm-amdgpu1:arm64. Preparing to unpack .../056-libdrm-amdgpu1_2.4.104-1_arm64.deb ... Unpacking libdrm-amdgpu1:arm64 (2.4.104-1) ... Selecting previously unselected package libdrm-nouveau2:arm64. Preparing to unpack .../057-libdrm-nouveau2_2.4.104-1_arm64.deb ... Unpacking libdrm-nouveau2:arm64 (2.4.104-1) ... Selecting previously unselected package libdrm-radeon1:arm64. Preparing to unpack .../058-libdrm-radeon1_2.4.104-1_arm64.deb ... Unpacking libdrm-radeon1:arm64 (2.4.104-1) ... Selecting previously unselected package libevent-2.1-7:arm64. Preparing to unpack .../059-libevent-2.1-7_2.1.12-stable-1_arm64.deb ... Unpacking libevent-2.1-7:arm64 (2.1.12-stable-1) ... Selecting previously unselected package libevent-core-2.1-7:arm64. Preparing to unpack .../060-libevent-core-2.1-7_2.1.12-stable-1_arm64.deb ... Unpacking libevent-core-2.1-7:arm64 (2.1.12-stable-1) ... Selecting previously unselected package libevent-extra-2.1-7:arm64. Preparing to unpack .../061-libevent-extra-2.1-7_2.1.12-stable-1_arm64.deb ... Unpacking libevent-extra-2.1-7:arm64 (2.1.12-stable-1) ... Selecting previously unselected package libevent-pthreads-2.1-7:arm64. Preparing to unpack .../062-libevent-pthreads-2.1-7_2.1.12-stable-1_arm64.deb ... Unpacking libevent-pthreads-2.1-7:arm64 (2.1.12-stable-1) ... Selecting previously unselected package libevent-openssl-2.1-7:arm64. Preparing to unpack .../063-libevent-openssl-2.1-7_2.1.12-stable-1_arm64.deb ... Unpacking libevent-openssl-2.1-7:arm64 (2.1.12-stable-1) ... Selecting previously unselected package libevent-dev. Preparing to unpack .../064-libevent-dev_2.1.12-stable-1_arm64.deb ... Unpacking libevent-dev (2.1.12-stable-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../065-libexpat1_2.2.10-2_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-2) ... Selecting previously unselected package librdmacm1:arm64. Preparing to unpack .../066-librdmacm1_33.2-1_arm64.deb ... Unpacking librdmacm1:arm64 (33.2-1) ... Selecting previously unselected package libfabric1. Preparing to unpack .../067-libfabric1_1.11.0-2_arm64.deb ... Unpacking libfabric1 (1.11.0-2) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../068-libglib2.0-0_2.66.8-1_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.66.8-1) ... Selecting previously unselected package ocl-icd-libopencl1:arm64. Preparing to unpack .../069-ocl-icd-libopencl1_2.2.14-2_arm64.deb ... Unpacking ocl-icd-libopencl1:arm64 (2.2.14-2) ... Selecting previously unselected package mesa-opencl-icd:arm64. Preparing to unpack .../070-mesa-opencl-icd_20.3.5-1_arm64.deb ... Unpacking mesa-opencl-icd:arm64 (20.3.5-1) ... Selecting previously unselected package libhmsbeagle1v5. Preparing to unpack .../071-libhmsbeagle1v5_3.1.2+dfsg-10_arm64.deb ... Unpacking libhmsbeagle1v5 (3.1.2+dfsg-10) ... Selecting previously unselected package libhmsbeagle-dev. Preparing to unpack .../072-libhmsbeagle-dev_3.1.2+dfsg-10_arm64.deb ... Unpacking libhmsbeagle-dev (3.1.2+dfsg-10) ... Selecting previously unselected package libhwloc15:arm64. Preparing to unpack .../073-libhwloc15_2.4.1+dfsg-1_arm64.deb ... Unpacking libhwloc15:arm64 (2.4.1+dfsg-1) ... Selecting previously unselected package libnuma1:arm64. Preparing to unpack .../074-libnuma1_2.0.12-1+b1_arm64.deb ... Unpacking libnuma1:arm64 (2.0.12-1+b1) ... Selecting previously unselected package libnuma-dev:arm64. Preparing to unpack .../075-libnuma-dev_2.0.12-1+b1_arm64.deb ... Unpacking libnuma-dev:arm64 (2.0.12-1+b1) ... Selecting previously unselected package libltdl7:arm64. Preparing to unpack .../076-libltdl7_2.4.6-15_arm64.deb ... Unpacking libltdl7:arm64 (2.4.6-15) ... Selecting previously unselected package libltdl-dev:arm64. Preparing to unpack .../077-libltdl-dev_2.4.6-15_arm64.deb ... Unpacking libltdl-dev:arm64 (2.4.6-15) ... Selecting previously unselected package libhwloc-dev:arm64. Preparing to unpack .../078-libhwloc-dev_2.4.1+dfsg-1_arm64.deb ... Unpacking libhwloc-dev:arm64 (2.4.1+dfsg-1) ... Selecting previously unselected package libpciaccess0:arm64. Preparing to unpack .../079-libpciaccess0_0.16-1_arm64.deb ... Unpacking libpciaccess0:arm64 (0.16-1) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../080-libxau6_1%3a1.0.9-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.9-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../081-libxdmcp6_1%3a1.1.2-3_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../082-libxcb1_1.14-3_arm64.deb ... Unpacking libxcb1:arm64 (1.14-3) ... Selecting previously unselected package libx11-data. Preparing to unpack .../083-libx11-data_2%3a1.7.2-1_all.deb ... Unpacking libx11-data (2:1.7.2-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../084-libx11-6_2%3a1.7.2-1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.7.2-1) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../085-libxext6_2%3a1.3.3-1.1_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.3-1.1) ... Selecting previously unselected package libxnvctrl0:arm64. Preparing to unpack .../086-libxnvctrl0_460.91.03-1_arm64.deb ... Unpacking libxnvctrl0:arm64 (460.91.03-1) ... Selecting previously unselected package libhwloc-plugins:arm64. Preparing to unpack .../087-libhwloc-plugins_2.4.1+dfsg-1_arm64.deb ... Unpacking libhwloc-plugins:arm64 (2.4.1+dfsg-1) ... Selecting previously unselected package libnl-3-dev:arm64. Preparing to unpack .../088-libnl-3-dev_3.4.0-1+b1_arm64.deb ... Unpacking libnl-3-dev:arm64 (3.4.0-1+b1) ... Selecting previously unselected package libnl-route-3-dev:arm64. Preparing to unpack .../089-libnl-route-3-dev_3.4.0-1+b1_arm64.deb ... Unpacking libnl-route-3-dev:arm64 (3.4.0-1+b1) ... Selecting previously unselected package libibverbs-dev:arm64. 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Unpacking openmpi-bin (4.1.0-10) ... Selecting previously unselected package libopenmpi-dev:arm64. Preparing to unpack .../102-libopenmpi-dev_4.1.0-10_arm64.deb ... Unpacking libopenmpi-dev:arm64 (4.1.0-10) ... Selecting previously unselected package libreadline-dev:arm64. Preparing to unpack .../103-libreadline-dev_8.1-1_arm64.deb ... Unpacking libreadline-dev:arm64 (8.1-1) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../104-mpi-default-dev_1.13_arm64.deb ... Unpacking mpi-default-dev (1.13) ... Selecting previously unselected package pkg-config. Preparing to unpack .../105-pkg-config_0.29.2-1_arm64.deb ... Unpacking pkg-config (0.29.2-1) ... Setting up libexpat1:arm64 (2.2.10-2) ... Setting up libpipeline1:arm64 (1.5.3-1) ... Setting up libpciaccess0:arm64 (0.16-1) ... Setting up libxau6:arm64 (1:1.0.9-1) ... Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:arm64 (2.66.8-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.3.4) ... Setting up libcbor0:arm64 (0.5.0+dfsg-2) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up autoconf-archive (20190106-2.1) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libz3-4:arm64 (4.8.10-1) ... Setting up libx11-data (2:1.7.2-1) ... Setting up libncurses6:arm64 (6.2+20201114-2) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up libhwloc15:arm64 (2.4.1+dfsg-1) ... Setting up libevent-core-2.1-7:arm64 (2.1.12-stable-1) ... Setting up libevent-2.1-7:arm64 (2.1.12-stable-1) ... Setting up autopoint (0.21-4) ... 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Setting up dwz (0.13+20210201-1) ... Setting up libnl-3-dev:arm64 (3.4.0-1+b1) ... Setting up groff-base (1.22.4-6) ... Setting up libclang-common-11-dev (1:11.0.1-2) ... Setting up libx11-6:arm64 (2:1.7.2-1) ... Setting up libdrm-amdgpu1:arm64 (2.4.104-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libclc-amdgcn (0.2.0+git20190827-8) ... Setting up libibverbs1:arm64 (33.2-1) ... Setting up libdrm-nouveau2:arm64 (2.4.104-1) ... Setting up ibverbs-providers:arm64 (33.2-1) ... Setting up libdrm-radeon1:arm64 (2.4.104-1) ... Setting up openssh-client (1:8.4p1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:arm64 (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxnvctrl0:arm64 (460.91.03-1) ... Setting up libclang-cpp11 (1:11.0.1-2) ... Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:arm64 (3.4.0-1+b1) ... Setting up libltdl-dev:arm64 (2.4.6-15) ... Setting up libclc-r600 (0.2.0+git20190827-8) ... Setting up libhwloc-dev:arm64 (2.4.1+dfsg-1) ... Setting up mesa-opencl-icd:arm64 (20.3.5-1) ... Setting up librdmacm1:arm64 (33.2-1) ... Setting up libucx0:arm64 (1.10.1~rc1+really.1.10.0-1) ... Setting up libhmsbeagle1v5 (3.1.2+dfsg-10) ... Setting up debhelper (13.3.4) ... Setting up libibverbs-dev:arm64 (33.2-1) ... Setting up libhwloc-plugins:arm64 (2.4.1+dfsg-1) ... Setting up libfabric1 (1.11.0-2) ... Setting up libhmsbeagle-dev (3.1.2+dfsg-10) ... Setting up libpmix2:arm64 (4.0.0-4.1) ... Setting up libopenmpi3:arm64 (4.1.0-10) ... Setting up libpmix-dev:arm64 (4.0.0-4.1) ... Setting up openmpi-bin (4.1.0-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:arm64 (4.1.0-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up mpi-default-dev (1.13) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package hostname: Temporary failure in name resolution I: Running cd /build/mrbayes-3.2.7a/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../mrbayes_3.2.7a-4_source.changes dpkg-buildpackage: info: source package mrbayes dpkg-buildpackage: info: source version 3.2.7a-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/mrbayes-3.2.7a' dh_auto_configure -- --with-beagle=/usr --enable-mpi=yes --enable-debug=yes ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-beagle=/usr --enable-mpi=yes --enable-debug=yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for pdflatex... no checking for bibtex... no configure: WARNING: pdflatex or bibtex is missing, documentation will not be rebuilt checking whether make supports the include directive... yes (GNU style) checking whether to compile using MPI... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for sqrt in -lm... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes configure: Trying to locate Beagle (hmsbeagle-1) in '/usr' checking libhmsbeagle/beagle.h usability... yes checking libhmsbeagle/beagle.h presence... yes checking for libhmsbeagle/beagle.h... yes checking for beagleCreateInstance in -lhmsbeagle... yes configure: Found Beagle in '/usr' checking for beagleSetCPUThreadCount in -lhmsbeagle... yes configure: Using BEAGLE_CFLAGS="-I/usr/include/libhmsbeagle-1 -pthread" configure: Using BEAGLE_LIBS="-L/usr/lib -lhmsbeagle" checking for a readline compatible library... -lreadline checking readline.h usability... no checking readline.h presence... no checking for readline.h... no checking readline/readline.h usability... yes checking readline/readline.h presence... yes checking for readline/readline.h... yes checking whether readline supports history... yes checking history.h usability... no checking history.h presence... no checking for history.h... no checking readline/history.h usability... yes checking readline/history.h presence... yes checking for readline/history.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for memory.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for size_t... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for C compiler vendor... gnu checking for a sed that does not truncate output... /bin/sed checking for C compiler version... 10.2.1 checking CFLAGS for maximum warnings... -Wall checking for floor... yes checking for memset... yes checking for pow... yes checking for sqrt... yes checking for strchr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/manual/Makefile config.status: creating doc/tutorial/Makefile config.status: creating examples/Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: executing depfiles commands make[1]: Leaving directory '/build/mrbayes-3.2.7a' debian/rules override_dh_auto_build make[1]: Entering directory '/build/mrbayes-3.2.7a' # build mb-mpi (from initial config) LIBS="-Wl,--as-needed" dh_auto_build make -j8 make[2]: Entering directory '/build/mrbayes-3.2.7a' Making all in src make[3]: Entering directory '/build/mrbayes-3.2.7a/src' make all-am make[4]: Entering directory '/build/mrbayes-3.2.7a/src' gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-bayes.o `test -f 'bayes.c' || echo './'`bayes.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-best.o `test -f 'best.c' || echo './'`best.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-command.o `test -f 'command.c' || echo './'`command.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-likelihood.o `test -f 'likelihood.c' || echo './'`likelihood.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-mbbeagle.o `test -f 'mbbeagle.c' || echo './'`mbbeagle.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-mcmc.o `test -f 'mcmc.c' || echo './'`mcmc.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-model.o `test -f 'model.c' || echo './'`model.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-proposal.o `test -f 'proposal.c' || echo './'`proposal.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/libhmsbeagle-1 -pthread -g -std=c99 -pedantic -g -O2 -fdebug-prefix-map=/build/mrbayes-3.2.7a=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o mb-sumpt.o `test -f 'sumpt.c' || echo './'`sumpt.c mbbeagle.c: In function 'TreeLikelihood_BeagleMultiPartition': mbbeagle.c:2962:25: warning: 'nStates' may be used uninitialized in this function [-Wmaybe-uninitialized] 2962 | for (j=0; j../mrbayes_3.2.7a-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/9988/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/9988/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/9988 and its subdirectories I: Current time: Fri Aug 20 02:44:03 +14 2021 I: pbuilder-time-stamp: 1629377043