I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 7 03:00:34 +14 2022 I: pbuilder-time-stamp: 1662469234 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [plastimatch_1.9.3+dfsg.1-1.dsc] I: copying [./plastimatch_1.9.3+dfsg.1.orig.tar.xz] I: copying [./plastimatch_1.9.3+dfsg.1-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.7FBFenca/trustedkeys.kbx': General error gpgv: Signature made Sat Jan 23 10:18:57 2021 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./plastimatch_1.9.3+dfsg.1-1.dsc dpkg-source: info: extracting plastimatch in plastimatch-1.9.3+dfsg.1 dpkg-source: info: unpacking plastimatch_1.9.3+dfsg.1.orig.tar.xz dpkg-source: info: unpacking plastimatch_1.9.3+dfsg.1-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/20695/tmp/hooks/D01_modify_environment starting debug: Running on ionos6-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/20695/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/20695/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=af8170af5c6e4b28b98dbd9c984c3b2c LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=20695 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.qba3XMFllb/pbuilderrc_BsRL --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.qba3XMFllb/b2 --logfile b2/build.log --extrapackages usrmerge plastimatch_1.9.3+dfsg.1-1.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Jun 22 2021 bash -rwxr-xr-x 3 root root 38280 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 23 2020 cat -rwxr-xr-x 1 root root 71624 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 23 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 23 2020 chown -rwxr-xr-x 1 root root 157960 Sep 23 2020 cp -rwxr-xr-x 1 root root 128724 Dec 11 2020 dash -rwxr-xr-x 1 root root 124904 Sep 23 2020 date -rwxr-xr-x 1 root root 92172 Sep 23 2020 dd -rwxr-xr-x 1 root root 100752 Sep 23 2020 df -rwxr-xr-x 1 root root 153964 Sep 23 2020 dir -rwxr-xr-x 1 root root 83644 Jul 29 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 71928 Jul 29 2021 findmnt -rwsr-xr-x 1 root root 30112 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 210488 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe -rwxr-xr-x 1 root root 100952 Mar 3 2021 gzip -rwxr-xr-x 1 root root 21916 Nov 8 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 23 2020 ln -rwxr-xr-x 1 root root 55572 Feb 8 2020 login -rwxr-xr-x 1 root root 153964 Sep 23 2020 ls -rwxr-xr-x 1 root root 153124 Jul 29 2021 lsblk -rwxr-xr-x 1 root root 96328 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 23 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 58920 Jul 29 2021 more -rwsr-xr-x 1 root root 50720 Jul 29 2021 mount -rwxr-xr-x 1 root root 13856 Jul 29 2021 mountpoint -rwxr-xr-x 1 root root 157996 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Jun 22 2021 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 23 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 23 2020 rm -rwxr-xr-x 1 root root 46984 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Sep 7 03:00 sh -> bash lrwxrwxrwx 1 root root 4 Sep 6 05:48 sh.distrib -> dash -rwxr-xr-x 1 root root 34696 Sep 23 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 23 2020 stty -rwsr-xr-x 1 root root 79396 Jul 29 2021 su -rwxr-xr-x 1 root root 34696 Sep 23 2020 sync -rwxr-xr-x 1 root root 602584 Feb 17 2021 tar -rwxr-xr-x 1 root root 13860 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 23 2020 touch -rwxr-xr-x 1 root root 34664 Sep 23 2020 true -rwxr-xr-x 1 root root 17768 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 30236 Jul 29 2021 umount -rwxr-xr-x 1 root root 34664 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress -rwxr-xr-x 1 root root 153964 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63024 Jul 29 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew I: user script /srv/workspace/pbuilder/20695/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), cmake, libblas-dev, libdcmtk-dev, libdlib-dev, libfftw3-dev, libgdcm-dev, libinsighttoolkit4-dev, liblapack-dev, libpng-dev, libsqlite3-dev, libtiff-dev, uuid-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on libdcmtk-dev; however: Package libdcmtk-dev is not installed. pbuilder-satisfydepends-dummy depends on libdlib-dev; however: Package libdlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgdcm-dev; however: Package libgdcm-dev is not installed. pbuilder-satisfydepends-dummy depends on libinsighttoolkit4-dev; however: Package libinsighttoolkit4-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libtiff-dev; however: Package libtiff-dev is not installed. pbuilder-satisfydepends-dummy depends on uuid-dev; however: Package uuid-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13{a} libblas-dev{a} libblas3{a} libbrotli1{a} libcharls-dev{a} libcharls2{a} libcurl3-gnutls{a} libcurl4{a} libcurl4-gnutls-dev{a} libdcmtk-dev{a} libdcmtk15{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdlib-data{a} libdlib-dev{a} libdlib19{a} libdouble-conversion-dev{a} libdouble-conversion3{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libgdcm-dev{a} libgdcm3.0{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu-dev{a} libicu67{a} libinsighttoolkit4-dev{a} libinsighttoolkit4.13{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjson-c5{a} libjsoncpp24{a} liblapack-dev{a} liblapack3{a} libldap-2.4-2{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libminc-dev{a} libminc2-5.2.0{a} libncurses6{a} libnetcdf-dev{a} libnetcdf18{a} libnghttp2-14{a} libnifti-dev{a} libnifti2-2{a} libnifti2-dev{a} libnifticdf-dev{a} libnifticdf2{a} libniftiio-dev{a} libniftiio2{a} libopenjp2-7{a} libpipeline1{a} libpng-dev{a} libpng16-16{a} libprocps8{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libsocket++1{a} libsqlite3-dev{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtiff-dev{a} libtiff5{a} libtiffxx5{a} libtool{a} libuchardet0{a} libuv1{a} libwebp6{a} libwrap0{a} libwrap0-dev{a} libxml2{a} libxml2-dev{a} libznz-dev{a} libznz3{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} uuid-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libpng-tools libsasl2-modules lynx pkg-config pkgconf psmisc publicsuffix wget 0 packages upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 152 MB of archives. After unpacking 489 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-8 [149 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 libcharls2 i386 2.2.0+dfsg-2 [82.1 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libcharls-dev i386 2.2.0+dfsg-2 [24.4 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 libncurses6 i386 6.2+20201114-2 [110 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 libprocps8 i386 2:3.3.17-5 [64.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 procps i386 2:3.3.17-5 [501 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 cmake-data all 3.18.4-2 [1725 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-7 [8775 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 libarchive13 i386 3.4.3-2+b1 [384 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 libsasl2-modules-db i386 2.1.27+dfsg-2.1 [70.0 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 libsasl2-2 i386 2.1.27+dfsg-2.1 [110 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 libldap-2.4-2 i386 2.4.57+dfsg-3 [244 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 libnghttp2-14 i386 1.43.0-1 [85.7 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 libpsl5 i386 0.21.0-1.2 [57.9 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 libssh2-1 i386 1.9.0-2 [164 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 libcurl4 i386 7.74.0-1.3+b1 [372 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libjsoncpp24 i386 1.9.4-4 [86.1 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 librhash0 i386 1.4.1-2 [144 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 libuv1 i386 1.40.0-2 [139 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 cmake i386 3.18.4-2 [7029 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 hdf5-helpers i386 1.10.6+repack-4 [40.4 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 icu-devtools i386 67.1-7 [209 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 libaec0 i386 1.0.4-1 [22.6 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 libsz2 i386 1.0.4-1 [6820 B] Get: 57 http://deb.debian.org/debian bullseye/main i386 libaec-dev i386 1.0.4-1 [21.5 kB] Get: 58 http://deb.debian.org/debian bullseye/main i386 libblas3 i386 3.9.0-3 [147 kB] Get: 59 http://deb.debian.org/debian bullseye/main i386 libblas-dev i386 3.9.0-3 [157 kB] Get: 60 http://deb.debian.org/debian bullseye/main i386 libcurl3-gnutls i386 7.74.0-1.3+b1 [368 kB] Get: 61 http://deb.debian.org/debian bullseye/main i386 libcurl4-gnutls-dev i386 7.74.0-1.3+b1 [471 kB] Get: 62 http://deb.debian.org/debian bullseye/main i386 libicu-dev i386 67.1-7 [9801 kB] Get: 63 http://deb.debian.org/debian bullseye/main i386 libxml2-dev i386 2.9.10+dfsg-6.7 [851 kB] Get: 64 http://deb.debian.org/debian bullseye/main i386 libssl-dev i386 1.1.1k-1 [1841 kB] Get: 65 http://deb.debian.org/debian bullseye/main i386 libpng16-16 i386 1.6.37-3 [303 kB] Get: 66 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] Get: 67 http://deb.debian.org/debian bullseye/main i386 libpng-dev i386 1.6.37-3 [307 kB] Get: 68 http://deb.debian.org/debian bullseye/main i386 libwrap0 i386 7.6.q-31 [60.0 kB] Get: 69 http://deb.debian.org/debian bullseye/main i386 libwrap0-dev i386 7.6.q-31 [23.4 kB] Get: 70 http://deb.debian.org/debian bullseye/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 71 http://deb.debian.org/debian bullseye/main i386 libjbig-dev i386 2.1-3.1+b2 [30.8 kB] Get: 72 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB] Get: 73 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo-dev i386 1:2.0.6-4 [299 kB] Get: 74 http://deb.debian.org/debian bullseye/main i386 libjpeg-dev i386 1:2.0.6-4 [67.8 kB] Get: 75 http://deb.debian.org/debian bullseye/main i386 liblzma-dev i386 5.2.5-2 [240 kB] Get: 76 http://deb.debian.org/debian bullseye/main i386 libdeflate0 i386 1.7-1 [48.4 kB] Get: 77 http://deb.debian.org/debian bullseye/main i386 libwebp6 i386 0.6.1-2.1 [269 kB] Get: 78 http://deb.debian.org/debian bullseye/main i386 libtiff5 i386 4.2.0-1 [305 kB] Get: 79 http://deb.debian.org/debian bullseye/main i386 libtiffxx5 i386 4.2.0-1 [129 kB] Get: 80 http://deb.debian.org/debian bullseye/main i386 libdeflate-dev i386 1.7-1 [44.4 kB] Get: 81 http://deb.debian.org/debian bullseye/main i386 libtiff-dev i386 4.2.0-1 [438 kB] Get: 82 http://deb.debian.org/debian bullseye/main i386 libdcmtk15 i386 3.6.5-1 [4919 kB] Get: 83 http://deb.debian.org/debian bullseye/main i386 libdcmtk-dev i386 3.6.5-1 [966 kB] Get: 84 http://deb.debian.org/debian bullseye/main i386 libdlib-data all 19.10-3.1 [63.4 MB] Get: 85 http://deb.debian.org/debian bullseye/main i386 libgfortran5 i386 10.2.1-6 [643 kB] Get: 86 http://deb.debian.org/debian bullseye/main i386 liblapack3 i386 3.9.0-3 [1960 kB] Get: 87 http://deb.debian.org/debian bullseye/main i386 libdlib19 i386 19.10-3.1 [3798 kB] Get: 88 http://deb.debian.org/debian bullseye/main i386 libdlib-dev i386 19.10-3.1 [1760 kB] Get: 89 http://deb.debian.org/debian bullseye/main i386 libdouble-conversion3 i386 3.1.5-6.1 [44.8 kB] Get: 90 http://deb.debian.org/debian bullseye/main i386 libdouble-conversion-dev i386 3.1.5-6.1 [64.0 kB] Get: 91 http://deb.debian.org/debian bullseye/main i386 libexpat1-dev i386 2.2.10-2 [147 kB] Get: 92 http://deb.debian.org/debian bullseye/main i386 libfftw3-double3 i386 3.3.8-2 [640 kB] Get: 93 http://deb.debian.org/debian bullseye/main i386 libfftw3-long3 i386 3.3.8-2 [326 kB] Get: 94 http://deb.debian.org/debian bullseye/main i386 libfftw3-quad3 i386 3.3.8-2 [1762 kB] Get: 95 http://deb.debian.org/debian bullseye/main i386 libfftw3-single3 i386 3.3.8-2 [652 kB] Get: 96 http://deb.debian.org/debian bullseye/main i386 libfftw3-bin i386 3.3.8-2 [53.5 kB] Get: 97 http://deb.debian.org/debian bullseye/main i386 libfftw3-dev i386 3.3.8-2 [3170 kB] Get: 98 http://deb.debian.org/debian bullseye/main i386 libjson-c5 i386 0.15-2 [45.2 kB] Get: 99 http://deb.debian.org/debian bullseye/main i386 libopenjp2-7 i386 2.4.0-3 [179 kB] Get: 100 http://deb.debian.org/debian bullseye/main i386 libsocket++1 i386 1.12.13-11 [83.8 kB] Get: 101 http://deb.debian.org/debian bullseye/main i386 libgdcm3.0 i386 3.0.8-1 [1901 kB] Get: 102 http://deb.debian.org/debian bullseye/main i386 libgdcm-dev i386 3.0.8-1 [269 kB] Get: 103 http://deb.debian.org/debian bullseye/main i386 libhdf5-103-1 i386 1.10.6+repack-4 [1156 kB] Get: 104 http://deb.debian.org/debian bullseye/main i386 libhdf5-cpp-103-1 i386 1.10.6+repack-4 [148 kB] Get: 105 http://deb.debian.org/debian bullseye/main i386 libhdf5-fortran-102 i386 1.10.6+repack-4 [114 kB] Get: 106 http://deb.debian.org/debian bullseye/main i386 libhdf5-hl-100 i386 1.10.6+repack-4 [93.2 kB] Get: 107 http://deb.debian.org/debian bullseye/main i386 libhdf5-hl-fortran-100 i386 1.10.6+repack-4 [58.3 kB] Get: 108 http://deb.debian.org/debian bullseye/main i386 libhdf5-hl-cpp-100 i386 1.10.6+repack-4 [38.1 kB] Get: 109 http://deb.debian.org/debian bullseye/main i386 libhdf5-dev i386 1.10.6+repack-4 [2586 kB] Get: 110 http://deb.debian.org/debian bullseye/main i386 libnetcdf18 i386 1:4.7.4-1 [436 kB] Get: 111 http://deb.debian.org/debian bullseye/main i386 libminc2-5.2.0 i386 2.4.03-3 [264 kB] Get: 112 http://deb.debian.org/debian bullseye/main i386 libznz3 i386 3.0.1-8 [14.0 kB] Get: 113 http://deb.debian.org/debian bullseye/main i386 libniftiio2 i386 3.0.1-8 [62.3 kB] Get: 114 http://deb.debian.org/debian bullseye/main i386 libinsighttoolkit4.13 i386 4.13.3withdata-dfsg1-4 [4820 kB] Get: 115 http://deb.debian.org/debian bullseye/main i386 libnifti2-2 i386 3.0.1-8 [79.6 kB] Get: 116 http://deb.debian.org/debian bullseye/main i386 libnifticdf2 i386 3.0.1-8 [51.8 kB] Get: 117 http://deb.debian.org/debian bullseye/main i386 libnifticdf-dev i386 3.0.1-8 [63.9 kB] Get: 118 http://deb.debian.org/debian bullseye/main i386 libniftiio-dev i386 3.0.1-8 [74.0 kB] Get: 119 http://deb.debian.org/debian bullseye/main i386 libznz-dev i386 3.0.1-8 [14.3 kB] Get: 120 http://deb.debian.org/debian bullseye/main i386 libnifti2-dev i386 3.0.1-8 [107 kB] Get: 121 http://deb.debian.org/debian bullseye/main i386 libnifti-dev all 3.0.1-8 [12.7 kB] Get: 122 http://deb.debian.org/debian bullseye/main i386 libnetcdf-dev i386 1:4.7.4-1 [93.6 kB] Get: 123 http://deb.debian.org/debian bullseye/main i386 libminc-dev i386 2.4.03-3 [73.8 kB] Get: 124 http://deb.debian.org/debian bullseye/main i386 libinsighttoolkit4-dev i386 4.13.3withdata-dfsg1-4 [2995 kB] Get: 125 http://deb.debian.org/debian bullseye/main i386 liblapack-dev i386 3.9.0-3 [3759 kB] Get: 126 http://deb.debian.org/debian bullseye/main i386 libsqlite3-dev i386 3.34.1-3 [1001 kB] Get: 127 http://deb.debian.org/debian bullseye/main i386 uuid-dev i386 2.36.1-8 [99.2 kB] Fetched 152 MB in 5s (33.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-8_i386.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../001-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_i386.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../003-libpipeline1_1.5.3-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_i386.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libcharls2:i386. Preparing to unpack .../005-libcharls2_2.2.0+dfsg-2_i386.deb ... Unpacking libcharls2:i386 (2.2.0+dfsg-2) ... Selecting previously unselected package libcharls-dev:i386. Preparing to unpack .../006-libcharls-dev_2.2.0+dfsg-2_i386.deb ... Unpacking libcharls-dev:i386 (2.2.0+dfsg-2) ... Selecting previously unselected package libncurses6:i386. Preparing to unpack .../007-libncurses6_6.2+20201114-2_i386.deb ... Unpacking libncurses6:i386 (6.2+20201114-2) ... Selecting previously unselected package libprocps8:i386. Preparing to unpack .../008-libprocps8_2%3a3.3.17-5_i386.deb ... Unpacking libprocps8:i386 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../009-procps_2%3a3.3.17-5_i386.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../010-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../011-libmagic-mgc_1%3a5.39-3_i386.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../012-libmagic1_1%3a5.39-3_i386.deb ... Unpacking libmagic1:i386 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../013-file_1%3a5.39-3_i386.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../014-gettext-base_0.21-4_i386.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../015-libsigsegv2_2.13-1_i386.deb ... Unpacking libsigsegv2:i386 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.18-5_i386.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package cmake-data. Preparing to unpack .../021-cmake-data_3.18.4-2_all.deb ... Unpacking cmake-data (3.18.4-2) ... Selecting previously unselected package libicu67:i386. Preparing to unpack .../022-libicu67_67.1-7_i386.deb ... Unpacking libicu67:i386 (67.1-7) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../023-libxml2_2.9.10+dfsg-6.7_i386.deb ... Unpacking libxml2:i386 (2.9.10+dfsg-6.7) ... Selecting previously unselected package libarchive13:i386. Preparing to unpack .../024-libarchive13_3.4.3-2+b1_i386.deb ... Unpacking libarchive13:i386 (3.4.3-2+b1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../025-libbrotli1_1.0.9-2+b2_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b2) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../026-libsasl2-modules-db_2.1.27+dfsg-2.1_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../027-libsasl2-2_2.1.27+dfsg-2.1_i386.deb ... Unpacking libsasl2-2:i386 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libldap-2.4-2:i386. Preparing to unpack .../028-libldap-2.4-2_2.4.57+dfsg-3_i386.deb ... Unpacking libldap-2.4-2:i386 (2.4.57+dfsg-3) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../029-libnghttp2-14_1.43.0-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.43.0-1) ... Selecting previously unselected package libpsl5:i386. Preparing to unpack .../030-libpsl5_0.21.0-1.2_i386.deb ... Unpacking libpsl5:i386 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../031-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:i386. Preparing to unpack .../032-libssh2-1_1.9.0-2_i386.deb ... Unpacking libssh2-1:i386 (1.9.0-2) ... Selecting previously unselected package libcurl4:i386. Preparing to unpack .../033-libcurl4_7.74.0-1.3+b1_i386.deb ... Unpacking libcurl4:i386 (7.74.0-1.3+b1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../034-libexpat1_2.2.10-2_i386.deb ... Unpacking libexpat1:i386 (2.2.10-2) ... Selecting previously unselected package libjsoncpp24:i386. Preparing to unpack .../035-libjsoncpp24_1.9.4-4_i386.deb ... Unpacking libjsoncpp24:i386 (1.9.4-4) ... Selecting previously unselected package librhash0:i386. Preparing to unpack .../036-librhash0_1.4.1-2_i386.deb ... Unpacking librhash0:i386 (1.4.1-2) ... Selecting previously unselected package libuv1:i386. Preparing to unpack .../037-libuv1_1.40.0-2_i386.deb ... Unpacking libuv1:i386 (1.40.0-2) ... Selecting previously unselected package cmake. Preparing to unpack .../038-cmake_3.18.4-2_i386.deb ... Unpacking cmake (3.18.4-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../039-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../040-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../041-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../042-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../043-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../044-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../045-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../046-libelf1_0.183-1_i386.deb ... Unpacking libelf1:i386 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../047-dwz_0.13+20210201-1_i386.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package gettext. Preparing to unpack .../048-gettext_0.21-4_i386.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../049-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../050-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../051-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../052-hdf5-helpers_1.10.6+repack-4_i386.deb ... Unpacking hdf5-helpers (1.10.6+repack-4) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../053-icu-devtools_67.1-7_i386.deb ... Unpacking icu-devtools (67.1-7) ... Selecting previously unselected package libaec0:i386. Preparing to unpack .../054-libaec0_1.0.4-1_i386.deb ... Unpacking libaec0:i386 (1.0.4-1) ... Selecting previously unselected package libsz2:i386. Preparing to unpack .../055-libsz2_1.0.4-1_i386.deb ... Unpacking libsz2:i386 (1.0.4-1) ... Selecting previously unselected package libaec-dev:i386. Preparing to unpack .../056-libaec-dev_1.0.4-1_i386.deb ... Unpacking libaec-dev:i386 (1.0.4-1) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../057-libblas3_3.9.0-3_i386.deb ... Unpacking libblas3:i386 (3.9.0-3) ... Selecting previously unselected package libblas-dev:i386. Preparing to unpack .../058-libblas-dev_3.9.0-3_i386.deb ... Unpacking libblas-dev:i386 (3.9.0-3) ... Selecting previously unselected package libcurl3-gnutls:i386. Preparing to unpack .../059-libcurl3-gnutls_7.74.0-1.3+b1_i386.deb ... Unpacking libcurl3-gnutls:i386 (7.74.0-1.3+b1) ... Selecting previously unselected package libcurl4-gnutls-dev:i386. Preparing to unpack .../060-libcurl4-gnutls-dev_7.74.0-1.3+b1_i386.deb ... Unpacking libcurl4-gnutls-dev:i386 (7.74.0-1.3+b1) ... Selecting previously unselected package libicu-dev:i386. Preparing to unpack .../061-libicu-dev_67.1-7_i386.deb ... Unpacking libicu-dev:i386 (67.1-7) ... Selecting previously unselected package libxml2-dev:i386. Preparing to unpack .../062-libxml2-dev_2.9.10+dfsg-6.7_i386.deb ... Unpacking libxml2-dev:i386 (2.9.10+dfsg-6.7) ... Selecting previously unselected package libssl-dev:i386. Preparing to unpack .../063-libssl-dev_1.1.1k-1_i386.deb ... Unpacking libssl-dev:i386 (1.1.1k-1) ... Selecting previously unselected package libpng16-16:i386. Preparing to unpack .../064-libpng16-16_1.6.37-3_i386.deb ... Unpacking libpng16-16:i386 (1.6.37-3) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../065-zlib1g-dev_1%3a1.2.11.dfsg-2_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.2.11.dfsg-2) ... Selecting previously unselected package libpng-dev:i386. Preparing to unpack .../066-libpng-dev_1.6.37-3_i386.deb ... Unpacking libpng-dev:i386 (1.6.37-3) ... Selecting previously unselected package libwrap0:i386. Preparing to unpack .../067-libwrap0_7.6.q-31_i386.deb ... Unpacking libwrap0:i386 (7.6.q-31) ... Selecting previously unselected package libwrap0-dev:i386. Preparing to unpack .../068-libwrap0-dev_7.6.q-31_i386.deb ... Unpacking libwrap0-dev:i386 (7.6.q-31) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../069-libjbig0_2.1-3.1+b2_i386.deb ... Unpacking libjbig0:i386 (2.1-3.1+b2) ... Selecting previously unselected package libjbig-dev:i386. Preparing to unpack .../070-libjbig-dev_2.1-3.1+b2_i386.deb ... Unpacking libjbig-dev:i386 (2.1-3.1+b2) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../071-libjpeg62-turbo_1%3a2.0.6-4_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.0.6-4) ... Selecting previously unselected package libjpeg62-turbo-dev:i386. Preparing to unpack .../072-libjpeg62-turbo-dev_1%3a2.0.6-4_i386.deb ... Unpacking libjpeg62-turbo-dev:i386 (1:2.0.6-4) ... Selecting previously unselected package libjpeg-dev:i386. Preparing to unpack .../073-libjpeg-dev_1%3a2.0.6-4_i386.deb ... Unpacking libjpeg-dev:i386 (1:2.0.6-4) ... Selecting previously unselected package liblzma-dev:i386. Preparing to unpack .../074-liblzma-dev_5.2.5-2_i386.deb ... Unpacking liblzma-dev:i386 (5.2.5-2) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../075-libdeflate0_1.7-1_i386.deb ... Unpacking libdeflate0:i386 (1.7-1) ... Selecting previously unselected package libwebp6:i386. Preparing to unpack .../076-libwebp6_0.6.1-2.1_i386.deb ... Unpacking libwebp6:i386 (0.6.1-2.1) ... Selecting previously unselected package libtiff5:i386. Preparing to unpack .../077-libtiff5_4.2.0-1_i386.deb ... Unpacking libtiff5:i386 (4.2.0-1) ... Selecting previously unselected package libtiffxx5:i386. Preparing to unpack .../078-libtiffxx5_4.2.0-1_i386.deb ... Unpacking libtiffxx5:i386 (4.2.0-1) ... Selecting previously unselected package libdeflate-dev:i386. Preparing to unpack .../079-libdeflate-dev_1.7-1_i386.deb ... Unpacking libdeflate-dev:i386 (1.7-1) ... Selecting previously unselected package libtiff-dev:i386. Preparing to unpack .../080-libtiff-dev_4.2.0-1_i386.deb ... Unpacking libtiff-dev:i386 (4.2.0-1) ... Selecting previously unselected package libdcmtk15. Preparing to unpack .../081-libdcmtk15_3.6.5-1_i386.deb ... Unpacking libdcmtk15 (3.6.5-1) ... Selecting previously unselected package libdcmtk-dev. Preparing to unpack .../082-libdcmtk-dev_3.6.5-1_i386.deb ... Unpacking libdcmtk-dev (3.6.5-1) ... Selecting previously unselected package libdlib-data. Preparing to unpack .../083-libdlib-data_19.10-3.1_all.deb ... Unpacking libdlib-data (19.10-3.1) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../084-libgfortran5_10.2.1-6_i386.deb ... Unpacking libgfortran5:i386 (10.2.1-6) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../085-liblapack3_3.9.0-3_i386.deb ... Unpacking liblapack3:i386 (3.9.0-3) ... Selecting previously unselected package libdlib19:i386. Preparing to unpack .../086-libdlib19_19.10-3.1_i386.deb ... Unpacking libdlib19:i386 (19.10-3.1) ... Selecting previously unselected package libdlib-dev:i386. Preparing to unpack .../087-libdlib-dev_19.10-3.1_i386.deb ... Unpacking libdlib-dev:i386 (19.10-3.1) ... Selecting previously unselected package libdouble-conversion3:i386. Preparing to unpack .../088-libdouble-conversion3_3.1.5-6.1_i386.deb ... Unpacking libdouble-conversion3:i386 (3.1.5-6.1) ... Selecting previously unselected package libdouble-conversion-dev:i386. Preparing to unpack .../089-libdouble-conversion-dev_3.1.5-6.1_i386.deb ... Unpacking libdouble-conversion-dev:i386 (3.1.5-6.1) ... Selecting previously unselected package libexpat1-dev:i386. Preparing to unpack .../090-libexpat1-dev_2.2.10-2_i386.deb ... Unpacking libexpat1-dev:i386 (2.2.10-2) ... Selecting previously unselected package libfftw3-double3:i386. Preparing to unpack .../091-libfftw3-double3_3.3.8-2_i386.deb ... Unpacking libfftw3-double3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-long3:i386. Preparing to unpack .../092-libfftw3-long3_3.3.8-2_i386.deb ... Unpacking libfftw3-long3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-quad3:i386. Preparing to unpack .../093-libfftw3-quad3_3.3.8-2_i386.deb ... Unpacking libfftw3-quad3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-single3:i386. Preparing to unpack .../094-libfftw3-single3_3.3.8-2_i386.deb ... Unpacking libfftw3-single3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../095-libfftw3-bin_3.3.8-2_i386.deb ... Unpacking libfftw3-bin (3.3.8-2) ... Selecting previously unselected package libfftw3-dev:i386. Preparing to unpack .../096-libfftw3-dev_3.3.8-2_i386.deb ... Unpacking libfftw3-dev:i386 (3.3.8-2) ... Selecting previously unselected package libjson-c5:i386. Preparing to unpack .../097-libjson-c5_0.15-2_i386.deb ... Unpacking libjson-c5:i386 (0.15-2) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../098-libopenjp2-7_2.4.0-3_i386.deb ... Unpacking libopenjp2-7:i386 (2.4.0-3) ... Selecting previously unselected package libsocket++1:i386. Preparing to unpack .../099-libsocket++1_1.12.13-11_i386.deb ... Unpacking libsocket++1:i386 (1.12.13-11) ... Selecting previously unselected package libgdcm3.0:i386. Preparing to unpack .../100-libgdcm3.0_3.0.8-1_i386.deb ... Unpacking libgdcm3.0:i386 (3.0.8-1) ... Selecting previously unselected package libgdcm-dev. Preparing to unpack .../101-libgdcm-dev_3.0.8-1_i386.deb ... Unpacking libgdcm-dev (3.0.8-1) ... Selecting previously unselected package libhdf5-103-1:i386. Preparing to unpack .../102-libhdf5-103-1_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-103-1:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-cpp-103-1:i386. Preparing to unpack .../103-libhdf5-cpp-103-1_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-cpp-103-1:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-fortran-102:i386. Preparing to unpack .../104-libhdf5-fortran-102_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-fortran-102:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-100:i386. Preparing to unpack .../105-libhdf5-hl-100_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-hl-100:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-fortran-100:i386. Preparing to unpack .../106-libhdf5-hl-fortran-100_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-hl-fortran-100:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-cpp-100:i386. Preparing to unpack .../107-libhdf5-hl-cpp-100_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-hl-cpp-100:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../108-libhdf5-dev_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-dev (1.10.6+repack-4) ... Selecting previously unselected package libnetcdf18:i386. Preparing to unpack .../109-libnetcdf18_1%3a4.7.4-1_i386.deb ... Unpacking libnetcdf18:i386 (1:4.7.4-1) ... Selecting previously unselected package libminc2-5.2.0:i386. Preparing to unpack .../110-libminc2-5.2.0_2.4.03-3_i386.deb ... Unpacking libminc2-5.2.0:i386 (2.4.03-3) ... Selecting previously unselected package libznz3:i386. Preparing to unpack .../111-libznz3_3.0.1-8_i386.deb ... Unpacking libznz3:i386 (3.0.1-8) ... Selecting previously unselected package libniftiio2:i386. Preparing to unpack .../112-libniftiio2_3.0.1-8_i386.deb ... Unpacking libniftiio2:i386 (3.0.1-8) ... Selecting previously unselected package libinsighttoolkit4.13. Preparing to unpack .../113-libinsighttoolkit4.13_4.13.3withdata-dfsg1-4_i386.deb ... Unpacking libinsighttoolkit4.13 (4.13.3withdata-dfsg1-4) ... Selecting previously unselected package libnifti2-2:i386. Preparing to unpack .../114-libnifti2-2_3.0.1-8_i386.deb ... Unpacking libnifti2-2:i386 (3.0.1-8) ... Selecting previously unselected package libnifticdf2:i386. Preparing to unpack .../115-libnifticdf2_3.0.1-8_i386.deb ... Unpacking libnifticdf2:i386 (3.0.1-8) ... Selecting previously unselected package libnifticdf-dev:i386. Preparing to unpack .../116-libnifticdf-dev_3.0.1-8_i386.deb ... Unpacking libnifticdf-dev:i386 (3.0.1-8) ... Selecting previously unselected package libniftiio-dev:i386. Preparing to unpack .../117-libniftiio-dev_3.0.1-8_i386.deb ... Unpacking libniftiio-dev:i386 (3.0.1-8) ... Selecting previously unselected package libznz-dev:i386. Preparing to unpack .../118-libznz-dev_3.0.1-8_i386.deb ... Unpacking libznz-dev:i386 (3.0.1-8) ... Selecting previously unselected package libnifti2-dev. Preparing to unpack .../119-libnifti2-dev_3.0.1-8_i386.deb ... Unpacking libnifti2-dev (3.0.1-8) ... Selecting previously unselected package libnifti-dev. Preparing to unpack .../120-libnifti-dev_3.0.1-8_all.deb ... Unpacking libnifti-dev (3.0.1-8) ... Selecting previously unselected package libnetcdf-dev. Preparing to unpack .../121-libnetcdf-dev_1%3a4.7.4-1_i386.deb ... Unpacking libnetcdf-dev (1:4.7.4-1) ... Selecting previously unselected package libminc-dev. Preparing to unpack .../122-libminc-dev_2.4.03-3_i386.deb ... Unpacking libminc-dev (2.4.03-3) ... Selecting previously unselected package libinsighttoolkit4-dev. Preparing to unpack .../123-libinsighttoolkit4-dev_4.13.3withdata-dfsg1-4_i386.deb ... Unpacking libinsighttoolkit4-dev (4.13.3withdata-dfsg1-4) ... Selecting previously unselected package liblapack-dev:i386. Preparing to unpack .../124-liblapack-dev_3.9.0-3_i386.deb ... Unpacking liblapack-dev:i386 (3.9.0-3) ... Selecting previously unselected package libsqlite3-dev:i386. Preparing to unpack .../125-libsqlite3-dev_3.34.1-3_i386.deb ... Unpacking libsqlite3-dev:i386 (3.34.1-3) ... Selecting previously unselected package uuid-dev:i386. Preparing to unpack .../126-uuid-dev_2.36.1-8_i386.deb ... Unpacking uuid-dev:i386 (2.36.1-8) ... Setting up libexpat1:i386 (2.2.10-2) ... Setting up libpipeline1:i386 (1.5.3-1) ... Setting up libdouble-conversion3:i386 (3.1.5-6.1) ... Setting up libpsl5:i386 (0.21.0-1.2) ... Setting up libfftw3-single3:i386 (3.3.8-2) ... Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers (1.10.6+repack-4) ... Setting up libicu67:i386 (67.1-7) ... Setting up libnifticdf2:i386 (3.0.1-8) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libcharls2:i386 (2.2.0+dfsg-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:i386 (1.0.9-2+b2) ... Setting up libnghttp2-14:i386 (1.43.0-1) ... Setting up libmagic1:i386 (1:5.39-3) ... Setting up libdeflate0:i386 (1.7-1) ... Setting up libfftw3-long3:i386 (3.3.8-2) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libjbig0:i386 (2.1-3.1+b2) ... Setting up libaec0:i386 (1.0.4-1) ... Setting up libsasl2-modules-db:i386 (2.1.27+dfsg-2.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:i386 (3.9.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libuv1:i386 (1.40.0-2) ... Setting up libexpat1-dev:i386 (2.2.10-2) ... Setting up libjpeg62-turbo:i386 (1:2.0.6-4) ... Setting up libsqlite3-dev:i386 (3.34.1-3) ... Setting up libwrap0:i386 (7.6.q-31) ... Setting up libjpeg62-turbo-dev:i386 (1:2.0.6-4) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up uuid-dev:i386 (2.36.1-8) ... Setting up libncurses6:i386 (6.2+20201114-2) ... Setting up libsigsegv2:i386 (2.13-1) ... Setting up libfftw3-quad3:i386 (3.3.8-2) ... Setting up libssl-dev:i386 (1.1.1k-1) ... Setting up libpng16-16:i386 (1.6.37-3) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:i386 (0.6.1-2.1) ... Setting up icu-devtools (67.1-7) ... Setting up libsocket++1:i386 (1.12.13-11) ... Setting up libnifticdf-dev:i386 (3.0.1-8) ... Setting up libfftw3-double3:i386 (3.3.8-2) ... Setting up libsasl2-2:i386 (2.1.27+dfsg-2.1) ... Setting up libgfortran5:i386 (10.2.1-6) ... Setting up libdouble-conversion-dev:i386 (3.1.5-6.1) ... Setting up libjsoncpp24:i386 (1.9.4-4) ... Setting up liblzma-dev:i386 (5.2.5-2) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-2) ... Setting up sensible-utils (0.0.14) ... Setting up librhash0:i386 (1.4.1-2) ... Setting up libwrap0-dev:i386 (7.6.q-31) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libznz3:i386 (3.0.1-8) ... Setting up libopenjp2-7:i386 (2.4.0-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:i386 (1.9.0-2) ... Setting up cmake-data (3.18.4-2) ... Setting up libtiff5:i386 (4.2.0-1) ... Setting up libdeflate-dev:i386 (1.7-1) ... Setting up libelf1:i386 (0.183-1) ... Setting up libjson-c5:i386 (0.15-2) ... Setting up libicu-dev:i386 (67.1-7) ... Setting up libxml2:i386 (2.9.10+dfsg-6.7) ... Setting up libdlib-data (19.10-3.1) ... Setting up libprocps8:i386 (2:3.3.17-5) ... Setting up libblas-dev:i386 (3.9.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up libsz2:i386 (1.0.4-1) ... Setting up libtiffxx5:i386 (4.2.0-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libcharls-dev:i386 (2.2.0+dfsg-2) ... Setting up liblapack3:i386 (3.9.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.21-4) ... Setting up libdcmtk15 (3.6.5-1) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:i386 (3.4.3-2+b1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libpng-dev:i386 (1.6.37-3) ... Setting up libaec-dev:i386 (1.0.4-1) ... Setting up libjpeg-dev:i386 (1:2.0.6-4) ... Setting up libjbig-dev:i386 (2.1-3.1+b2) ... Setting up libldap-2.4-2:i386 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up libcurl3-gnutls:i386 (7.74.0-1.3+b1) ... Setting up libcurl4-gnutls-dev:i386 (7.74.0-1.3+b1) ... Setting up libniftiio2:i386 (3.0.1-8) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml2-dev:i386 (2.9.10+dfsg-6.7) ... Setting up libtiff-dev:i386 (4.2.0-1) ... Setting up libdlib19:i386 (19.10-3.1) ... Setting up libgdcm3.0:i386 (3.0.8-1) ... Setting up libznz-dev:i386 (3.0.1-8) ... Setting up libnifti2-2:i386 (3.0.1-8) ... Setting up liblapack-dev:i386 (3.9.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libhdf5-103-1:i386 (1.10.6+repack-4) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up libhdf5-cpp-103-1:i386 (1.10.6+repack-4) ... Setting up libcurl4:i386 (7.74.0-1.3+b1) ... Setting up libfftw3-dev:i386 (3.3.8-2) ... Setting up libhdf5-hl-100:i386 (1.10.6+repack-4) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgdcm-dev (3.0.8-1) ... Setting up libdcmtk-dev (3.6.5-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libniftiio-dev:i386 (3.0.1-8) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libdlib-dev:i386 (19.10-3.1) ... Setting up dh-autoreconf (20) ... Setting up libhdf5-hl-cpp-100:i386 (1.10.6+repack-4) ... Setting up libhdf5-fortran-102:i386 (1.10.6+repack-4) ... Setting up libnetcdf18:i386 (1:4.7.4-1) ... Setting up cmake (3.18.4-2) ... Setting up libhdf5-hl-fortran-100:i386 (1.10.6+repack-4) ... Setting up libnifti2-dev (3.0.1-8) ... Setting up libnifti-dev (3.0.1-8) ... Setting up libminc2-5.2.0:i386 (2.4.03-3) ... Setting up debhelper (13.3.4) ... Setting up libhdf5-dev (1.10.6+repack-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdf-dev (1:4.7.4-1) ... Setting up libminc-dev (2.4.03-3) ... Setting up libinsighttoolkit4.13 (4.13.3withdata-dfsg1-4) ... Setting up libinsighttoolkit4-dev (4.13.3withdata-dfsg1-4) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl The following NEW packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 59.5 kB of archives. After this operation, 157 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main i386 libnumber-compare-perl all 0.03-1.1 [6956 B] Get:2 http://deb.debian.org/debian bullseye/main i386 libtext-glob-perl all 0.11-1 [8888 B] Get:3 http://deb.debian.org/debian bullseye/main i386 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:4 http://deb.debian.org/debian bullseye/main i386 usrmerge all 25 [13.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 59.5 kB in 0s (3385 kB/s) Selecting previously unselected package libnumber-compare-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33100 files and directories currently installed.) Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... Unpacking libnumber-compare-perl (0.03-1.1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package usrmerge. Preparing to unpack .../archives/usrmerge_25_all.deb ... Unpacking usrmerge (25) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libnumber-compare-perl (0.03-1.1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up usrmerge (25) ... The system has been successfully converted. Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. I: Building the package I: Running cd /build/plastimatch-1.9.3+dfsg.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package plastimatch dpkg-buildpackage: info: source version 1.9.3+dfsg.1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Gregory C. Sharp dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/plastimatch-1.9.3+dfsg.1' dh_auto_configure -- -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test DCMTK_HAS_EC_INVALIDVALUE -- Performing Test DCMTK_HAS_EC_INVALIDVALUE - Success -- DCMTK version 3.6.5 found. -- Etags targets added. -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could NOT find libLBFGS (missing: libLBFGS_LIBRARY libLBFGS_INCLUDE_DIR) -- Could NOT find nlopt (missing: nlopt_LIBRARY nlopt_INCLUDE_DIR) -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - not found -- Looking for CL_VERSION_2_1 -- Looking for CL_VERSION_2_1 - not found -- Looking for CL_VERSION_2_0 -- Looking for CL_VERSION_2_0 - not found -- Looking for CL_VERSION_1_2 -- Looking for CL_VERSION_1_2 - not found -- Looking for CL_VERSION_1_1 -- Looking for CL_VERSION_1_1 - not found -- Looking for CL_VERSION_1_0 -- Looking for CL_VERSION_1_0 - not found -- Could NOT find OpenCL (missing: OpenCL_LIBRARY OpenCL_INCLUDE_DIR) -- Check for compiler OpenMP support... -- OpenMP flags "-fopenmp", OpenMP libraries "" -- SSE2_FLAGS "-msse2 -mfpmath=sse" -- Could NOT find wxWidgets (missing: wxWidgets_LIBRARIES wxWidgets_INCLUDE_DIRS) -- CUDA Not found -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Looking for wxWidgets - not found. -- Looking for Matlab - not found. -- Looking for Octave - not found. -- Plastimatch version is 1.9.3 -- The imported target "vtkgdcm" references the file "/usr/lib/i386-linux-gnu/libvtkgdcm.so.3.0.8" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmsharpglue" references the file "/usr/lib/i386-linux-gnu/libvtkgdcmsharpglue.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmJava" references the file "/usr/lib/i386-linux-gnu/jni/libvtkgdcmJava.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPython" references the file "/usr/lib/python/dist-packages/vtkgdcmPython.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPythonD" references the file "/usr/lib/i386-linux-gnu/libvtkgdcmPythonD.so.3.0.8" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdump" references the file "/usr/bin/gdcmdump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdiff" references the file "/usr/bin/gdcmdiff" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmraw" references the file "/usr/bin/gdcmraw" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscanner" references the file "/usr/bin/gdcmscanner" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmanon" references the file "/usr/bin/gdcmanon" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmgendir" references the file "/usr/bin/gdcmgendir" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmimg" references the file "/usr/bin/gdcmimg" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmconv" references the file "/usr/bin/gdcmconv" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmtar" references the file "/usr/bin/gdcmtar" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcminfo" references the file "/usr/bin/gdcminfo" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscu" references the file "/usr/bin/gdcmscu" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmxml" references the file "/usr/bin/gdcmxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpap3" references the file "/usr/bin/gdcmpap3" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpdf" references the file "/usr/bin/gdcmpdf" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/i386-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- ITK_VERSION = 4.13.3 found -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h - found -- ITK_BASE = /usr -- Looking for Qt4 - not found -- Looking for Qt5 - not found -- Could NOT find yaml (missing: yaml_LIBRARIES yaml_INCLUDE_DIR) -- Machine is 32-bit -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Checking host processor: x86_64 -- Checking target processor: x86_64 -- Checking epsilon: 2.22045E-16 2.22045E-16 2.22045E-16 -- Checking sign of char: char is signed -- Not appending /build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -- Appending /build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu make[1]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1' dh_auto_build cd obj-i686-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/plastimatch-1.9.3+dfsg.1 -B/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/CMakeFiles /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake --color= make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/devillard /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake --color= make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/specfun /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/depend.internal". Scanning dependencies of target devillard Scanning dependencies of target inih Scanning dependencies of target specfun make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/depend.internal". make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/depend.internal". make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend.internal". Scanning dependencies of target plmclp Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend.internal". Scanning dependencies of target lbfgs make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build Scanning dependencies of target nkidecompress make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 0%] Building CXX object libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o [ 1%] Building C object libs/inih-r29/CMakeFiles/inih.dir/ini.c.o [ 1%] Building CXX object libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard && /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++11 -o CMakeFiles/devillard.dir/wirth.cpp.o -c /build/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29 && /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++11 -o CMakeFiles/inih.dir/INIReader.cpp.o -c /build/plastimatch-1.9.3+dfsg.1/libs/inih-r29/INIReader.cpp cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29 && /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -o CMakeFiles/inih.dir/ini.c.o -c /build/plastimatch-1.9.3+dfsg.1/libs/inih-r29/ini.c [ 1%] Building C object libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o Scanning dependencies of target plmsys cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun && /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -o CMakeFiles/specfun.dir/mpbdv.c.o -c /build/plastimatch-1.9.3+dfsg.1/libs/specfun/mpbdv.c make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build [ 1%] Building CXX object src/plastimatch/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++11 -o CMakeFiles/plmclp.dir/plm_clp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp/plm_clp.cxx make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 1%] Building CXX object libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress && /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++11 -o CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress/nkidecompress.cxx [ 1%] Building C object libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cc -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -o CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -c /build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/lib/lbfgs.c [ 1%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/file_util.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/dlib_threads.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/dlib_threads.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/file_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/file_util.cxx [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/dir_list.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/dir_list.cxx [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/logfile.cxx.o [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/logfile.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/logfile.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/option_range.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/option_range.cxx [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_fwrite.cxx [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/path_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/path_util.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_endian.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_endian.cxx [ 3%] Linking CXX static library ../../libdevillard.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard && /usr/bin/cmake -P CMakeFiles/devillard.dir/cmake_clean_target.cmake cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libdevillard.a CMakeFiles/devillard.dir/wirth.cpp.o /usr/bin/ranlib ../../libdevillard.a make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 3%] Built target devillard [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_sleep.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_timer.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_timer.cxx [ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/print_and_exit.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/print_and_exit.cxx [ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/string_util.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/string_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/string_util.cxx [ 4%] Building C object src/plastimatch/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/cc -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/usr/include/gdcm-3.0 -I/usr/include/ITK-4.13 -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -o CMakeFiles/plmsys.dir/delayload_legacy.c.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/delayload_legacy.c [ 4%] Linking C static library ../../libspecfun.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake [ 4%] Linking CXX static library ../../libnkidecompress.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress && /usr/bin/cmake -P CMakeFiles/nkidecompress.dir/cmake_clean_target.cmake cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libspecfun.a CMakeFiles/specfun.dir/mpbdv.c.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress && /usr/bin/cmake -E cmake_link_script CMakeFiles/nkidecompress.dir/link.txt --verbose=1 /usr/bin/ranlib ../../libspecfun.a make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' /usr/bin/ar qc ../../libnkidecompress.a CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o [ 4%] Built target specfun /usr/bin/ranlib ../../libnkidecompress.a make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 4%] Built target nkidecompress [ 4%] Linking C static library ../../liblbfgs.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -P CMakeFiles/lbfgs.dir/cmake_clean_target.cmake cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -E cmake_link_script CMakeFiles/lbfgs.dir/link.txt --verbose=1 /usr/bin/ar qc ../../liblbfgs.a CMakeFiles/lbfgs.dir/lib/lbfgs.c.o /usr/bin/ranlib ../../liblbfgs.a make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 4%] Built target lbfgs [ 4%] Linking CXX static library ../../libinih.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29 && /usr/bin/cmake -P CMakeFiles/inih.dir/cmake_clean_target.cmake cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29 && /usr/bin/cmake -E cmake_link_script CMakeFiles/inih.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libinih.a CMakeFiles/inih.dir/ini.c.o CMakeFiles/inih.dir/INIReader.cpp.o /usr/bin/ranlib ../../libinih.a make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 4%] Built target inih [ 4%] Linking CXX shared library ../../../libplmsys.so cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsys.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmsys.so.1.9 -o ../../../libplmsys.so.1.9 CMakeFiles/plmsys.dir/dir_list.cxx.o CMakeFiles/plmsys.dir/dlib_threads.cxx.o CMakeFiles/plmsys.dir/file_util.cxx.o CMakeFiles/plmsys.dir/logfile.cxx.o CMakeFiles/plmsys.dir/option_range.cxx.o CMakeFiles/plmsys.dir/path_util.cxx.o CMakeFiles/plmsys.dir/plm_endian.cxx.o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o CMakeFiles/plmsys.dir/plm_sleep.cxx.o CMakeFiles/plmsys.dir/plm_timer.cxx.o CMakeFiles/plmsys.dir/print_and_exit.cxx.o CMakeFiles/plmsys.dir/string_util.cxx.o CMakeFiles/plmsys.dir/delayload_legacy.c.o -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -ldl -lpthread -lpthread -lnsl -lpng -lz -ljpeg -lblas -llapack -lsqlite3 cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsys.so.1.9 ../../../libplmsys.so.1.9 ../../../libplmsys.so make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 4%] Built target plmsys make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base/CMakeFiles/plmbase.dir/DependInfo.cmake --color= Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base/CMakeFiles/plmbase.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base/CMakeFiles/plmbase.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base/CMakeFiles/plmbase.dir/depend.internal". Scanning dependencies of target plmbase make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 5%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o [ 5%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_interpolate.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmbase.dir/bspline_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_warp.cxx [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/aperture.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/astroid_dose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/astroid_dose.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/aperture.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/aperture.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/beam_geometry.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/beam_geometry.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_header.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_header.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_xform_legacy.cxx [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_xform.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_xform.cxx [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/cxt_extract.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/cxt_extract.cxx [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/cxt_io.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/cxt_io.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dicom_probe.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dicom_probe.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dicom_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dicom_util.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/direction_cosines.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/direction_cosines.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/direction_matrices.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/direction_matrices.cxx [ 8%] Linking CXX static library libplmclp.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 /usr/bin/ar qc libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o /usr/bin/ranlib libplmclp.a make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 8%] Built target plmclp [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/exchkeys.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/exchkeys.cxx [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/float_pair_list.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/float_pair_list.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/float_pair_list.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/gaussian.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/gaussian.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/hnd_io.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/hnd_io.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/image_stats.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/image_stats.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/image_stats.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/interpolate.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/interpolate.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_bbox.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_bbox.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_bbox.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_directions.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_directions.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_accumulate.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_cast.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_cast.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_clone.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_create.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_create.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int64.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint64.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_vec.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_origin.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_region.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_region.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_save.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_save.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_shift_scale.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_stats.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_stats.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_stats.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_metadata.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_metadata.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_metadata.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_pointset.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_pointset.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_pointset.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_resample.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_resample.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_resample.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_volume_header.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_warp.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mc_dose.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/mc_dose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/mc_dose.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/metadata.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/metadata.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/metadata.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mha_io.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/mha_io.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/mha_io.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/nki_io.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/nki_io.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/nki_io.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/parameter_parser.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/parameter_parser.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/parameter_parser.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_file_format.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_file_format.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_file_format.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_file_format.cxx: In function 'Plm_file_format plm_file_format_deduce(const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_file_format.cxx:97:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fgets (line, MAX_LINE, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_image.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_convert.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_image_header.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_header.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_image_set.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_set.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_type.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_image_type.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_type.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_warp.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/pointset.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/pointset_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset_warp.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Labeled_point]': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx:65:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 65 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Point]': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx:65:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_image.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx: In function 'void pfm_load(Proj_image*, const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx:175:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 175 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx:183:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 183 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx:190:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 190 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image_dir.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_image_dir.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image_dir.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_matrix.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_matrix.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_matrix.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_volume.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_volume.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_volume.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/pwlut.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pwlut.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rasterize_slice.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rasterizer.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rasterizer.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_fcsv(const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx:81:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 81 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_txt(const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx:135:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 135 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ray_trace_probe.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ray_trace_uniform.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rpl_volume.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rpl_volume.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rpl_volume_lut.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtds_dcmtk.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rt_study.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rt_study.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rt_study_metadata.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtog_io.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtog_io.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtss.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtss.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtss_contour.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtss_roi.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtss_roi.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtplan.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtplan_beam.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtplan_control_pt.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/segmentation.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/segmentation.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/segmentation.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_extract.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/slice_extract.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/slice_extract.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_list.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/slice_list.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/slice_list.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_img_extract.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/ss_img_extract.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ss_img_extract.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_list_io.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/ss_list_io.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ss_list_io.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/threading.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/threading.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/threading.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/thumbnail.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/thumbnail.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/thumbnail.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_convolve.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf_convolve.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf_convolve.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_jacobian.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf_jacobian.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf_jacobian.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf_stats.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf_stats.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_boundary_behavior.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmbase.dir/volume_conv.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_conv.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_fill.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_fill.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_fill.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_gaussian.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_gaussian.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_gaussian.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_grad.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_grad.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_grad.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_header.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_header.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_header.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_limit.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_limit.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_resample.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_resample.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_stats.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_stats.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xform.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_convert.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xform_convert.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_convert.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xform_legacy.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_point.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xform_point.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_point.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_ct.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_ct.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_ct_transform.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_demographic.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_demographic.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_dir.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dir.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dose.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_dose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:230:33: warning: format '%d' expects argument of type 'int', but argument 2 has type 'itk::Transform::NumberOfParametersType' {aka 'long unsigned int'} [-Wformat=] 230 | printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int itk::Transform::NumberOfParametersType {aka long unsigned int} | %ld [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_patient.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_patient.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_plan.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_plan.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_structures.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_load(Xform*, FILE*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:37:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 37 | fgets (buf,1024,fp); | ~~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:99:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:100:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 100 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:103:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:141:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 141 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:150:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 150 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:156:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 156 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:168:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 168 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_studyset.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_studyset.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_studyset.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xpm.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xpm.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xpm.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_file.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_file.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_file.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_image.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx: In function 'void xio_dose_load_header(Xio_dose_header*, const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:73:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:82:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 82 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:86:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 86 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:90:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 90 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:101:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:106:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 106 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:117:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 117 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:120:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 120 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:135:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 135 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_metadata.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_module.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rdd.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtdose.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtss.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx: In function 'void add_cms_structure(Rtss*, const Xio_studyset&, const char*, float)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:120:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 120 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:121:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 121 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:122:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 122 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:123:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 123 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:124:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 124 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:134:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 134 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:141:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 141 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:180:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 180 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rt_study.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_series.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_sro.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_uid.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx: In member function 'void Dcmtk_rt_study::rt_ion_plan_load()': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:101:30: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=] 101 | printf (">> Num beams = %d\n", num_beams); | ~^ ~~~~~~~~~ | | | | int long unsigned int | %ld /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:142:35: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=] 142 | printf (">> Adding beam (%d cp)\n", num_cp); | ~^ ~~~~~~ | | | | int long unsigned int | %ld /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:208:37: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] 208 | printf (">> Adding cp (%d spots)\n", num_spots); | ~^ ~~~~~~~~~ | | | | int long int | %ld [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_util.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_util.cxx [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ray_trace_exact.cxx [ 40%] Linking CXX shared library ../../../libplmbase.so cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmbase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmbase.so.1.9 -o ../../../libplmbase.so.1.9 CMakeFiles/plmbase.dir/aperture.cxx.o CMakeFiles/plmbase.dir/astroid_dose.cxx.o CMakeFiles/plmbase.dir/beam_geometry.cxx.o CMakeFiles/plmbase.dir/bspline_header.cxx.o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o CMakeFiles/plmbase.dir/bspline_warp.cxx.o CMakeFiles/plmbase.dir/bspline_xform.cxx.o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o CMakeFiles/plmbase.dir/cxt_extract.cxx.o CMakeFiles/plmbase.dir/cxt_io.cxx.o CMakeFiles/plmbase.dir/dicom_probe.cxx.o CMakeFiles/plmbase.dir/dicom_util.cxx.o CMakeFiles/plmbase.dir/direction_cosines.cxx.o CMakeFiles/plmbase.dir/direction_matrices.cxx.o CMakeFiles/plmbase.dir/exchkeys.cxx.o CMakeFiles/plmbase.dir/float_pair_list.cxx.o CMakeFiles/plmbase.dir/gaussian.cxx.o CMakeFiles/plmbase.dir/hnd_io.cxx.o CMakeFiles/plmbase.dir/image_stats.cxx.o CMakeFiles/plmbase.dir/interpolate.cxx.o CMakeFiles/plmbase.dir/itk_bbox.cxx.o CMakeFiles/plmbase.dir/itk_directions.cxx.o CMakeFiles/plmbase.dir/itk_image.cxx.o CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o CMakeFiles/plmbase.dir/itk_image_cast.cxx.o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o CMakeFiles/plmbase.dir/itk_image_create.cxx.o CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o CMakeFiles/plmbase.dir/itk_image_region.cxx.o CMakeFiles/plmbase.dir/itk_image_save.cxx.o CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o CMakeFiles/plmbase.dir/itk_image_stats.cxx.o CMakeFiles/plmbase.dir/itk_metadata.cxx.o CMakeFiles/plmbase.dir/itk_pointset.cxx.o CMakeFiles/plmbase.dir/itk_resample.cxx.o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o CMakeFiles/plmbase.dir/itk_warp.cxx.o CMakeFiles/plmbase.dir/mc_dose.cxx.o CMakeFiles/plmbase.dir/metadata.cxx.o CMakeFiles/plmbase.dir/mha_io.cxx.o CMakeFiles/plmbase.dir/nki_io.cxx.o CMakeFiles/plmbase.dir/parameter_parser.cxx.o CMakeFiles/plmbase.dir/plm_file_format.cxx.o CMakeFiles/plmbase.dir/plm_image.cxx.o CMakeFiles/plmbase.dir/plm_image_convert.cxx.o CMakeFiles/plmbase.dir/plm_image_header.cxx.o CMakeFiles/plmbase.dir/plm_image_set.cxx.o CMakeFiles/plmbase.dir/plm_image_type.cxx.o CMakeFiles/plmbase.dir/plm_warp.cxx.o CMakeFiles/plmbase.dir/pointset.cxx.o CMakeFiles/plmbase.dir/pointset_warp.cxx.o CMakeFiles/plmbase.dir/proj_image.cxx.o CMakeFiles/plmbase.dir/proj_image_dir.cxx.o CMakeFiles/plmbase.dir/proj_matrix.cxx.o CMakeFiles/plmbase.dir/proj_volume.cxx.o CMakeFiles/plmbase.dir/pwlut.cxx.o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o CMakeFiles/plmbase.dir/rasterizer.cxx.o CMakeFiles/plmbase.dir/raw_pointset.cxx.o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o CMakeFiles/plmbase.dir/rpl_volume.cxx.o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o CMakeFiles/plmbase.dir/rt_study.cxx.o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o CMakeFiles/plmbase.dir/rtog_io.cxx.o CMakeFiles/plmbase.dir/rtss.cxx.o CMakeFiles/plmbase.dir/rtss_contour.cxx.o CMakeFiles/plmbase.dir/rtss_roi.cxx.o CMakeFiles/plmbase.dir/rtplan.cxx.o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o CMakeFiles/plmbase.dir/segmentation.cxx.o CMakeFiles/plmbase.dir/slice_extract.cxx.o CMakeFiles/plmbase.dir/slice_list.cxx.o CMakeFiles/plmbase.dir/ss_img_extract.cxx.o CMakeFiles/plmbase.dir/ss_list_io.cxx.o CMakeFiles/plmbase.dir/threading.cxx.o CMakeFiles/plmbase.dir/thumbnail.cxx.o CMakeFiles/plmbase.dir/vf.cxx.o CMakeFiles/plmbase.dir/vf_convolve.cxx.o CMakeFiles/plmbase.dir/vf_jacobian.cxx.o CMakeFiles/plmbase.dir/vf_stats.cxx.o CMakeFiles/plmbase.dir/volume.cxx.o CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o CMakeFiles/plmbase.dir/volume_conv.cxx.o CMakeFiles/plmbase.dir/volume_fill.cxx.o CMakeFiles/plmbase.dir/volume_gaussian.cxx.o CMakeFiles/plmbase.dir/volume_grad.cxx.o CMakeFiles/plmbase.dir/volume_header.cxx.o CMakeFiles/plmbase.dir/volume_limit.cxx.o CMakeFiles/plmbase.dir/volume_resample.cxx.o CMakeFiles/plmbase.dir/volume_stats.cxx.o CMakeFiles/plmbase.dir/xform.cxx.o CMakeFiles/plmbase.dir/xform_convert.cxx.o CMakeFiles/plmbase.dir/xform_legacy.cxx.o CMakeFiles/plmbase.dir/xform_point.cxx.o CMakeFiles/plmbase.dir/xio_ct.cxx.o CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o CMakeFiles/plmbase.dir/xio_demographic.cxx.o CMakeFiles/plmbase.dir/xio_dir.cxx.o CMakeFiles/plmbase.dir/xio_dose.cxx.o CMakeFiles/plmbase.dir/xio_patient.cxx.o CMakeFiles/plmbase.dir/xio_plan.cxx.o CMakeFiles/plmbase.dir/xio_structures.cxx.o CMakeFiles/plmbase.dir/xio_studyset.cxx.o CMakeFiles/plmbase.dir/xpm.cxx.o CMakeFiles/plmbase.dir/dcmtk_file.cxx.o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o CMakeFiles/plmbase.dir/dcmtk_series.cxx.o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o CMakeFiles/plmbase.dir/dcmtk_util.cxx.o CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libnkidecompress.a ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -lm -lpthread -ldl /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base && /usr/bin/cmake -E cmake_symlink_library ../../../libplmbase.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmbase.so make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 40%] Built target plmbase make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util/CMakeFiles/plmutil.dir/DependInfo.cmake --color= Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util/CMakeFiles/plmutil.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util/CMakeFiles/plmutil.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util/CMakeFiles/plmutil.dir/depend.internal". Scanning dependencies of target plmutil make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/bspline_correspond.cxx [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dvh.cxx.o [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/dvh.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/dvh.cxx [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx [ 42%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o [ 42%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmutil.dir/dice_statistics.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/dice_statistics.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/dicom_sro_save.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmutil.dir/distance_map.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/distance_map.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/diff.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/diff.cxx [ 42%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/geometry_chooser.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmutil.dir/image_center.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/image_center.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/image_boundary.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/image_boundary.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_crop.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_crop.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_adjust.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_adjust.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_distance_map.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_gabor.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_histogram_matching.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_intersect.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_intersect.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_intersect.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_local_intensity_correction.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_mask.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_mask.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_scale.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_scale.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_scale.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_threshold.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_threshold.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_threshold.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_union.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_union.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_union.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/landmark_diff.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/landmark_diff.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/proj_image_filter.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/proj_image_filter.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_series.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/plm_series.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/plm_series.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_study.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/plm_study.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/plm_study.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/rt_study_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/rt_study_warp.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/sift.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/sift.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/simplify_points.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/simplify_points.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/ss_img_stats.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_mha.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/synthetic_mha.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_vf.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/synthetic_vf.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/threshbox.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/threshbox.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_adjust.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/volume_adjust.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/volume_adjust.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/volume_boundary_type.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/xf_invert.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/xf_invert.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/xf_invert.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/zcrop.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/zcrop.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/zcrop.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx: In function 'void do_overlap_fraction(Threshbox_parms*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:257:8: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 257 | fscanf(fp1, "%s", tmpbuf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:258:8: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 258 | fscanf(fp1, "%f %f %f", &phys_max1[0], &phys_max1[1], &phys_max1[2]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:266:8: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 266 | fscanf(fp2, "%s", tmpbuf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:267:8: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 267 | fscanf(fp2, "%f %f %f", &phys_max2[0], &phys_max2[1], &phys_max2[2]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gabor.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/gabor.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/gabor.cxx [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/ramp_filter.cxx [ 51%] Linking CXX shared library ../../../libplmutil.so cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmutil.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmutil.so.1.9 -o ../../../libplmutil.so.1.9 CMakeFiles/plmutil.dir/bspline_correspond.cxx.o CMakeFiles/plmutil.dir/dice_statistics.cxx.o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o CMakeFiles/plmutil.dir/distance_map.cxx.o CMakeFiles/plmutil.dir/diff.cxx.o CMakeFiles/plmutil.dir/dvh.cxx.o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o CMakeFiles/plmutil.dir/image_boundary.cxx.o CMakeFiles/plmutil.dir/image_center.cxx.o CMakeFiles/plmutil.dir/itk_adjust.cxx.o CMakeFiles/plmutil.dir/itk_crop.cxx.o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o CMakeFiles/plmutil.dir/itk_gabor.cxx.o CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o CMakeFiles/plmutil.dir/itk_intersect.cxx.o CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o CMakeFiles/plmutil.dir/itk_mask.cxx.o CMakeFiles/plmutil.dir/itk_scale.cxx.o CMakeFiles/plmutil.dir/itk_threshold.cxx.o CMakeFiles/plmutil.dir/itk_union.cxx.o CMakeFiles/plmutil.dir/landmark_diff.cxx.o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o CMakeFiles/plmutil.dir/plm_series.cxx.o CMakeFiles/plmutil.dir/plm_study.cxx.o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o CMakeFiles/plmutil.dir/sift.cxx.o CMakeFiles/plmutil.dir/simplify_points.cxx.o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o CMakeFiles/plmutil.dir/threshbox.cxx.o CMakeFiles/plmutil.dir/volume_adjust.cxx.o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o CMakeFiles/plmutil.dir/xf_invert.cxx.o CMakeFiles/plmutil.dir/zcrop.cxx.o CMakeFiles/plmutil.dir/gabor.cxx.o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include -lfftw3f -lfftw3 ../../../libdevillard.a ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lnsl -lblas -llapack -lsqlite3 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ljpeg -lpng -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 -lz /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -ldl /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -lpthread -lm ../../../libnkidecompress.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util && /usr/bin/cmake -E cmake_symlink_library ../../../libplmutil.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmutil.so make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 51%] Built target plmutil make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/depend make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/depend make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/depend.internal". Scanning dependencies of target plmreconstruct make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 51%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/bowtie_correction.cxx [ 51%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmreconstruct.dir/drr.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/drr.cxx [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/drr_options.cxx [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/drr_trilin.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmreconstruct.dir/fdk.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/fdk.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/fdk_util.cxx Scanning dependencies of target plmdose make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 53%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/beam_calc.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_calc.cxx [ 53%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/compute_dose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/compute_dose.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/beam_map.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_map.cxx [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/bragg_curve.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/bragg_curve.cxx [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/particle_type.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/particle_type.cxx [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_beam_model.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_dij.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_dij.cxx [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_lut.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_lut.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load(const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:64:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 64 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load_xio(const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:86:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 86 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:90:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 90 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:103:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:114:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 114 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:125:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_spot_map.cxx Scanning dependencies of target plmregister make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_mebs.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_parms.cxx [ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/plan_calc.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline.cxx [ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_sigma.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_landmarks.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline_gm.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_gm.cxx [ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline_mi.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_mi.cxx [ 58%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/wed_parms.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_calc.cxx: In member function 'bool Beam_calc::load(const char*)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_calc.cxx:194:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 194 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_mse.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_mi.cxx: In function 'void bspline_mi_hist_lookup(long int*, long int*, long int*, float*, Joint_histogram*, float, float)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_mi.cxx:210:20: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'plm_long' {aka 'int'} [-Wformat=] 210 | "Bin %ld from val %g parms [off=%g, delt=%g, (%ld bins)]\n", | ~~^ | | | long int | %d 211 | fl, f_val, mi_hist->fixed.offset, mi_hist->fixed.delta, | ~~ | | | plm_long {aka int} /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_mi.cxx:210:61: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'plm_long' {aka 'int'} [-Wformat=] 210 | "Bin %ld from val %g parms [off=%g, delt=%g, (%ld bins)]\n", | ~~^ | | | long int | %d 211 | fl, f_val, mi_hist->fixed.offset, mi_hist->fixed.delta, 212 | mi_hist->fixed.bins); | ~~~~~~~~~~~~~~~~~~~ | | | plm_long {aka int} [ 59%] Linking CXX shared library ../../../libplmreconstruct.so cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmreconstruct.dir/link.txt --verbose=1 [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize.cxx [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_lbfgsb.cxx /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmreconstruct.so.1.9 -o ../../../libplmreconstruct.so.1.9 CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o CMakeFiles/plmreconstruct.dir/drr.cxx.o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o CMakeFiles/plmreconstruct.dir/fdk.cxx.o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -lm ../../../libnkidecompress.a -lpthread -ldl /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 ../../../libdevillard.a [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_liblbfgs.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_nlopt.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_steepest.cxx [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_parms.cxx [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_score.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../../libplmreconstruct.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmreconstruct.so make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 61%] Built target plmreconstruct [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_stage.cxx [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_state.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize_analytic.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize_numeric.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize_semi_analytic.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/demons.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/demons.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/demons_cpu.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/demons_cpu.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_state.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/demons_state.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/demons_state.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/gpuit_demons.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/groupwise_parms.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_align_center.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/histogram.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/histogram.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/histogram.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_demons.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_util.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_optimizer.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_registration.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_registration.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_registration_observer.cxx [ 67%] Linking CXX shared library ../../../libplmdose.so cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmdose.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmdose.so.1.9 -o ../../../libplmdose.so.1.9 CMakeFiles/plmdose.dir/beam_calc.cxx.o CMakeFiles/plmdose.dir/beam_map.cxx.o CMakeFiles/plmdose.dir/bragg_curve.cxx.o CMakeFiles/plmdose.dir/compute_dose.cxx.o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o CMakeFiles/plmdose.dir/particle_type.cxx.o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o CMakeFiles/plmdose.dir/rt_dij.cxx.o CMakeFiles/plmdose.dir/rt_lut.cxx.o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o CMakeFiles/plmdose.dir/rt_mebs.cxx.o CMakeFiles/plmdose.dir/rt_parms.cxx.o CMakeFiles/plmdose.dir/plan_calc.cxx.o CMakeFiles/plmdose.dir/rt_sigma.cxx.o CMakeFiles/plmdose.dir/wed_parms.cxx.o -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../../../libplmutil.so.1.9 ../../../libspecfun.a ../../../libplmbase.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -lm ../../../libnkidecompress.a ../../../libplmsys.so.1.9 -lpthread -ldl /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 ../../../libdevillard.a [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_tps.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_tps.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_tps.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_symlink_library ../../../libplmdose.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmdose.so make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 67%] Built target plmdose [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/joint_histogram.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/joint_histogram.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/landmark_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/landmark_warp.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/metric_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/metric_parms.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_state.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/metric_state.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/metric_state.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/process_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/process_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/process_parms.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/rbf_cluster.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/rbf_gauss.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/rbf_wendland.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_data.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_data.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_data.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_parms.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_resample.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_resample.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_util.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_util.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_util.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/shared_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/shared_parms.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/similarity_metric_type.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/stage_parms.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/stage_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/stage_parms.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/translation_grid_search.cxx [ 72%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mi.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/translation_mi.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/translation_mi.cxx [ 72%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mse.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/translation_mse.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/translation_mse.cxx [ 72%] Linking CXX shared library ../../../libplmregister.so cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmregister.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmregister.so.1.9 -o ../../../libplmregister.so.1.9 CMakeFiles/plmregister.dir/bspline.cxx.o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o CMakeFiles/plmregister.dir/bspline_gm.cxx.o CMakeFiles/plmregister.dir/bspline_mi.cxx.o CMakeFiles/plmregister.dir/bspline_mse.cxx.o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o CMakeFiles/plmregister.dir/bspline_parms.cxx.o CMakeFiles/plmregister.dir/bspline_score.cxx.o CMakeFiles/plmregister.dir/bspline_stage.cxx.o CMakeFiles/plmregister.dir/bspline_state.cxx.o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o CMakeFiles/plmregister.dir/demons.cxx.o CMakeFiles/plmregister.dir/demons_cpu.cxx.o CMakeFiles/plmregister.dir/demons_state.cxx.o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o CMakeFiles/plmregister.dir/histogram.cxx.o CMakeFiles/plmregister.dir/itk_align_center.cxx.o CMakeFiles/plmregister.dir/itk_demons.cxx.o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o CMakeFiles/plmregister.dir/itk_registration.cxx.o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o CMakeFiles/plmregister.dir/itk_tps.cxx.o CMakeFiles/plmregister.dir/joint_histogram.cxx.o CMakeFiles/plmregister.dir/landmark_warp.cxx.o CMakeFiles/plmregister.dir/metric_parms.cxx.o CMakeFiles/plmregister.dir/metric_state.cxx.o CMakeFiles/plmregister.dir/process_parms.cxx.o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o CMakeFiles/plmregister.dir/registration.cxx.o CMakeFiles/plmregister.dir/registration_data.cxx.o CMakeFiles/plmregister.dir/registration_parms.cxx.o CMakeFiles/plmregister.dir/registration_resample.cxx.o CMakeFiles/plmregister.dir/registration_util.cxx.o CMakeFiles/plmregister.dir/shared_parms.cxx.o CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o CMakeFiles/plmregister.dir/stage_parms.cxx.o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o CMakeFiles/plmregister.dir/translation_mi.cxx.o CMakeFiles/plmregister.dir/translation_mse.cxx.o -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../../../liblbfgs.a ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -lm ../../../libnkidecompress.a ../../../libplmsys.so.1.9 -lpthread -ldl /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 ../../../libdevillard.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register && /usr/bin/cmake -E cmake_symlink_library ../../../libplmregister.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmregister.so make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 72%] Built target plmregister make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment/CMakeFiles/plmsegment.dir/DependInfo.cmake --color= Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment/CMakeFiles/plmsegment.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend.internal". Scanning dependencies of target plmsegment make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_feature.cxx [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_parms.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_task.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_thumbnailer.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/dlib_trainer.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_staple.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_parms.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_seg_weights.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_stats.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_vote.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/ml_convert.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/ml_convert.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/segment_body.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/segment_body.cxx [ 77%] Linking CXX shared library ../../../libplmsegment.so cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsegment.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmsegment.so.1.9 -o ../../../libplmsegment.so.1.9 CMakeFiles/plmsegment.dir/autolabel.cxx.o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o CMakeFiles/plmsegment.dir/mabs.cxx.o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o CMakeFiles/plmsegment.dir/ml_convert.cxx.o CMakeFiles/plmsegment.dir/segment_body.cxx.o -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../../../libplmregister.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 -lfftw3f -lfftw3 ../../../libdevillard.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -lm ../../../libnkidecompress.a -ldl /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 ../../../liblbfgs.a cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsegment.so.1.9 ../../../libplmsegment.so.1.9 ../../../libplmsegment.so make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 77%] Built target plmsegment make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend.internal". Scanning dependencies of target landmark_diff Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend.internal". make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend.internal". Scanning dependencies of target dlib_train Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/depend.internal". Dependee "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/depend.internal". make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Scanning dependencies of target hnd_to_pfm make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build Scanning dependencies of target bragg_curve Scanning dependencies of target demons make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/landmark_diff_main.cxx [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/dlib_train.dir/dlib_train.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/dlib_train.cxx cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/hnd_to_pfm.cxx [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/bragg_curve_main.cxx [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_main.cxx.o Scanning dependencies of target dicom_uid cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/demons.dir/demons_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/demons_main.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Scanning dependencies of target dicom_info make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o Scanning dependencies of target shuffle_mha cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/dicom_uid_main.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build Scanning dependencies of target wed make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build Scanning dependencies of target check_grad Scanning dependencies of target sobp make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Scanning dependencies of target merge_vfs make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Scanning dependencies of target xvi_archive make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/dicom_info.dir/dicom_info.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/dicom_info.cxx make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/wed.dir/wed_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/wed_main.cxx [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o Scanning dependencies of target compute_distance cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build [ 79%] Building CXX object src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/sobp_main.cxx [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/check_grad.dir/check_grad.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/check_grad.cxx [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/compute_distance.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/compute_distance.cxx [ 81%] Linking CXX executable ../../../landmark_diff cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -o ../../../landmark_diff -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/bragg_curve_opts.cxx [ 81%] Linking CXX executable ../../../hnd_to_pfm cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -o ../../../hnd_to_pfm -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 81%] Linking CXX executable ../../../bragg_curve cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bragg_curve.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../../bragg_curve -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 Scanning dependencies of target plastimatch make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 81%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_add.cxx [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/demons.dir/demons_opts.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/demons_opts.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 81%] Built target landmark_diff [ 82%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_adjust.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 82%] Built target bragg_curve [ 82%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_autolabel_train.cxx [ 83%] Linking CXX executable ../../../demons cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/demons.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/demons.dir/demons_main.cxx.o CMakeFiles/demons.dir/demons_opts.cxx.o -o ../../../demons -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 83%] Built target hnd_to_pfm [ 83%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_autolabel.cxx [ 83%] Linking CXX executable ../../../dicom_uid cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_uid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../../dicom_uid -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 83%] Linking CXX executable ../../../sobp cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/sobp.dir/sobp_main.cxx.o -o ../../../sobp -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 83%] Linking CXX executable ../../../wed cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/wed.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/wed.dir/wed_main.cxx.o -o ../../../wed -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 83%] Built target demons [ 83%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_bbox.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 83%] Built target dicom_uid [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_benchmark.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 84%] Built target sobp [ 84%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/closest_point.cxx [ 85%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/read_obj.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 85%] Built target wed [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_boundary.cxx [ 85%] Linking CXX executable ../../../shuffle_mha cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../../shuffle_mha -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 85%] Built target shuffle_mha [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_compare.cxx [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx [ 85%] Linking CXX executable ../../../compute_distance cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/compute_distance.dir/compute_distance.cxx.o CMakeFiles/compute_distance.dir/closest_point.cxx.o CMakeFiles/compute_distance.dir/read_obj.cxx.o -o ../../../compute_distance -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 85%] Built target compute_distance [ 86%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_crop.cxx [ 86%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dice.cxx [ 86%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_diff.cxx [ 87%] Linking CXX executable ../../../dicom_info cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../../dicom_info -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 87%] Linking CXX executable ../../../check_grad cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../../check_grad -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 88%] Linking CXX executable ../../../xvi_archive cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../../xvi_archive -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../libinih.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dose.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 89%] Built target dicom_info [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_drr.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 89%] Built target check_grad [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dvh.cxx [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_fdk.cxx [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_filter.cxx [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_gamma.cxx [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_header.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 90%] Built target xvi_archive [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_intersect.cxx [ 92%] Linking CXX executable ../../../merge_vfs cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../../merge_vfs -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_lm_warp.cxx make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 92%] Built target merge_vfs [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_mabs.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_mask.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_ml_convert.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_multiply.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_probe.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_register.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_register.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_resample.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_sift.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_stats.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_synth.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_synth_vf.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_threshold.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_thumbnail.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_union.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_warp_pointset.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_wed.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xf_convert.cxx /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx: In function 'void do_command_xio_dvh(int, char**)': /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:46:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 46 | fgets(buf, 200, fp); //XiO Dose Volume Histogram | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:49:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 49 | fgets(patientid, 200, fp); // patient ID, abcde1234 | ~~~~~^~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:50:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 50 | fgets(buf, 200, fp); // plan | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:51:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 51 | fgets(structurename, 200, fp); // structure name | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:52:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 52 | fgets(buf, 200, fp); // N.NN mm resolution | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:54:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 54 | fgets(buf, 200, fp); // number of bins | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:59:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 59 | fgets(buf, 200, fp); // date | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:60:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 60 | fgets(buf, 200, fp); // table header: min bin dose (cGy), bin volume (cc) | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:78:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 78 | fgets(buf, 200, fp); | ~~~~~^~~~~~~~~~~~~~ [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xf_invert.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/plastimatch_main.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -I/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/nifti -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-4.13 -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -c /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/plastimatch_startup.cxx [100%] Linking CXX executable ../../../dlib_train cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlib_train.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dlib_train.dir/dlib_train.cxx.o -o ../../../dlib_train -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [100%] Built target dlib_train [100%] Linking CXX executable ../../../plastimatch cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/plastimatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/plastimatch.dir/pcmd_add.cxx.o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -o ../../../plastimatch -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun -L/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/i386-linux-gnu/libdouble-conversion.so.3.1 -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.13.so.1 /usr/lib/libITKIOLSM-4.13.so.1 -lexpat /usr/lib/libITKIOMesh-4.13.so.1 /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOBruker-4.13.so.1 /usr/lib/libITKIOCSV-4.13.so.1 /usr/lib/libITKIOHDF5-4.13.so.1 -lminc2 -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-4.13.so.1 /usr/lib/libITKIOMRC-4.13.so.1 /usr/lib/libITKOptimizersv4-4.13.so.1 /usr/lib/libITKReview-4.13.so.1 /usr/lib/libITKVideoIO-4.13.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/i386-linux-gnu/libi2d.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpeg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg8.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg12.so.15.3.6.5 /usr/lib/i386-linux-gnu/libijg16.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmjpls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcharls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libcmr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmwlm.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpstat.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmrt.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmseg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmtract.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmpmap.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a /usr/lib/i386-linux-gnu/libdcmtls.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmsr.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmimage.so.15.3.6.5 -ltiff -lxml2 /usr/lib/i386-linux-gnu/libdcmdsig.so.15.3.6.5 -lssl -lcrypto /usr/lib/i386-linux-gnu/libdcmqrdb.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmnet.so.15.3.6.5 -lwrap /usr/lib/i386-linux-gnu/libdcmimgle.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmfg.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmiod.so.15.3.6.5 /usr/lib/i386-linux-gnu/libdcmdata.so.15.3.6.5 /usr/lib/i386-linux-gnu/liboflog.so.15.3.6.5 /usr/lib/i386-linux-gnu/libofstd.so.15.3.6.5 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.13.so.1 /usr/lib/libITKgiftiio-4.13.so.1 -lznz -lniftiio -lexpat /usr/lib/libitklbfgs-4.13.so.1 /usr/lib/libITKIOBMP-4.13.so.1 /usr/lib/libITKIOGDCM-4.13.so.1 /usr/lib/i386-linux-gnu/libgdcmMSFF.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDICT.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmIOD.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmDSED.so.3.0.8 /usr/lib/i386-linux-gnu/libgdcmCommon.so.3.0.8 /usr/lib/libITKIOGIPL-4.13.so.1 /usr/lib/libITKIOJPEG-4.13.so.1 /usr/lib/libITKIOMeta-4.13.so.1 /usr/lib/libITKIONIFTI-4.13.so.1 /usr/lib/libITKIONRRD-4.13.so.1 /usr/lib/libITKNrrdIO-4.13.so.1 /usr/lib/libITKIOPNG-4.13.so.1 /usr/lib/libITKIOTIFF-4.13.so.1 /usr/lib/libITKIOVTK-4.13.so.1 /usr/lib/libITKLabelMap-4.13.so.1 /usr/lib/libITKQuadEdgeMesh-4.13.so.1 /usr/lib/libITKPolynomials-4.13.so.1 /usr/lib/libITKBiasCorrection-4.13.so.1 /usr/lib/libITKBioCell-4.13.so.1 /usr/lib/libITKIOBioRad-4.13.so.1 /usr/lib/libITKIOStimulate-4.13.so.1 /usr/lib/libITKIOSpatialObjects-4.13.so.1 /usr/lib/libITKIOXML-4.13.so.1 /usr/lib/libITKFEM-4.13.so.1 /usr/lib/libITKMetaIO-4.13.so.1 /usr/lib/libITKOptimizers-4.13.so.1 /usr/lib/libITKIOGE-4.13.so.1 /usr/lib/libITKIOSiemens-4.13.so.1 /usr/lib/libITKIOIPL-4.13.so.1 /usr/lib/libITKIOTransformHDF5-4.13.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.13.so.1 /usr/lib/libITKIOTransformMatlab-4.13.so.1 /usr/lib/libITKIOTransformBase-4.13.so.1 /usr/lib/libITKTransformFactory-4.13.so.1 /usr/lib/libITKKLMRegionGrowing-4.13.so.1 /usr/lib/libITKVTK-4.13.so.1 /usr/lib/libITKWatersheds-4.13.so.1 /usr/lib/libITKStatistics-4.13.so.1 /usr/lib/libitkNetlibSlatec-4.13.so.1 /usr/lib/libITKSpatialObjects-4.13.so.1 /usr/lib/libITKMesh-4.13.so.1 /usr/lib/libITKTransform-4.13.so.1 /usr/lib/libITKPath-4.13.so.1 /usr/lib/libitkopenjpeg-4.13.so.1 /usr/lib/libITKIOImageBase-4.13.so.1 /usr/lib/libITKVideoCore-4.13.so.1 /usr/lib/libITKCommon-4.13.so.1 /usr/lib/libitksys-4.13.so.1 -lm /usr/lib/libITKVNLInstantiation-4.13.so.1 /usr/lib/libitkvnl_algo-4.13.so.1 /usr/lib/libitkvnl-4.13.so.1 /usr/lib/libitkv3p_netlib-4.13.so.1 /usr/lib/libitknetlib-4.13.so.1 /usr/lib/libitkvcl-4.13.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [100%] Built target plastimatch make[2]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/plastimatch-1.9.3+dfsg.1' dh_auto_test cd obj-i686-linux-gnu && make -j15 test ARGS\+=-j15 make[2]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process -j15 Test project /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu Start 10: gauss-1 Start 11: gauss-2 Start 12: gauss-3 Start 14: gauss-5 Start 28: rect-1 Start 1: black-1 Start 2: cyl-1 Start 3: cyl-mask-2 Start 5: cyl-mask-3 Start 7: donut-1 Start 8: donut-2 Start 9: gabor-01 Start 13: gauss-4 Start 15: gauss-6 Start 17: gauss-double-1 1/571 Test #12: gauss-3 ............................... Passed 0.12 sec Start 18: gauss-double-2 2/571 Test #10: gauss-1 ............................... Passed 0.15 sec Start 19: gauss-ushort-1 3/571 Test #11: gauss-2 ............................... Passed 0.15 sec Start 20: gauss-ushort-2 4/571 Test #14: gauss-5 ............................... Passed 0.15 sec Start 21: lung-1 5/571 Test #1: black-1 ............................... Passed 0.15 sec Start 26: ptv-1 6/571 Test #9: gabor-01 .............................. Passed 0.15 sec Start 27: ptv-2 7/571 Test #3: cyl-mask-2 ............................ Passed 0.16 sec Start 29: rect-2 8/571 Test #2: cyl-1 ................................. Passed 0.16 sec Start 30: rect-2s 9/571 Test #8: donut-2 ............................... Passed 0.16 sec Start 31: rect-3 10/571 Test #5: cyl-mask-3 ............................ Passed 0.17 sec Start 32: rect-4 11/571 Test #13: gauss-4 ............................... Passed 0.16 sec Start 33: rect-5 12/571 Test #17: gauss-double-1 ........................ Passed 0.16 sec Start 39: rect-10-roi-1 13/571 Test #15: gauss-6 ............................... Passed 0.17 sec Start 42: rect-11-roi 14/571 Test #18: gauss-double-2 ........................ Passed 0.14 sec Start 43: rect-12 15/571 Test #19: gauss-ushort-1 ........................ Passed 0.12 sec Start 44: rect-13 16/571 Test #20: gauss-ushort-2 ........................ Passed 0.13 sec Start 45: rect-14 17/571 Test #30: rect-2s ............................... Passed 0.14 sec Start 46: rect-15 18/571 Test #33: rect-5 ................................ Passed 0.13 sec Start 47: rect-16 19/571 Test #27: ptv-2 ................................. Passed 0.16 sec Start 48: rect-17 20/571 Test #39: rect-10-roi-1 ......................... Passed 0.14 sec Start 56: rectarr-03-a 21/571 Test #26: ptv-1 ................................. Passed 0.17 sec Start 61: sphere-1 22/571 Test #32: rect-4 ................................ Passed 0.15 sec Start 62: sphere-2 23/571 Test #42: rect-11-roi ........................... Passed 0.15 sec Start 63: sphere-3 24/571 Test #28: rect-1 ................................ Passed 0.34 sec Start 65: sphere-5 25/571 Test #7: donut-1 ............................... Passed 0.34 sec Start 71: vf-zero 26/571 Test #43: rect-12 ............................... Passed 0.14 sec Start 72: vf-trans-1 27/571 Test #44: rect-13 ............................... Passed 0.14 sec Start 73: vf-trans-2 28/571 Test #45: rect-14 ............................... Passed 0.13 sec Start 98: drr-a 29/571 Test #47: rect-16 ............................... Passed 0.12 sec Start 186: plm-convert-dicom-a 30/571 Test #46: rect-15 ............................... Passed 0.15 sec Start 281: plm-reg-itk-translation 31/571 Test #61: sphere-1 .............................. Passed 0.13 sec Start 313: plm-bsp-mse-h 32/571 Test #48: rect-17 ............................... Passed 0.15 sec Start 336: plm-bsp-mi-c-2 33/571 Test #56: rectarr-03-a .......................... Passed 0.15 sec Start 439: plm-reg-compose 34/571 Test #62: sphere-2 .............................. Passed 0.15 sec Start 526: plm-xf-convert-d 35/571 Test #65: sphere-5 .............................. Passed 0.13 sec Start 4: cyl-2 36/571 Test #29: rect-2 ................................ Passed 0.33 sec Start 6: cyl-3 37/571 Test #63: sphere-3 .............................. Passed 0.16 sec Start 22: lung-2 38/571 Test #71: vf-zero ............................... Passed 0.15 sec Start 36: rect-8 39/571 Test #31: rect-3 ................................ Passed 0.37 sec Start 37: rect-9 40/571 Test #72: vf-trans-1 ............................ Passed 0.14 sec Start 51: rectarr-01-a 41/571 Test #73: vf-trans-2 ............................ Passed 0.13 sec Start 57: rectarr-03 42/571 Test #36: rect-8 ................................ Passed 0.16 sec Start 58: rectarr-04 43/571 Test #526: plm-xf-convert-d ...................... Passed 0.19 sec Start 66: sphere-6 44/571 Test #51: rectarr-01-a .......................... Passed 0.14 sec Start 67: sphere-7 45/571 Test #186: plm-convert-dicom-a ................... Passed 0.26 sec Start 74: vf-radial-1 46/571 Test #4: cyl-2 ................................. Passed 0.22 sec Start 90: plm-diff-a 47/571 Test #37: rect-9 ................................ Passed 0.18 sec Start 93: plm-diff-b 48/571 Test #6: cyl-3 ................................. Passed 0.27 sec Start 101: drr-b 49/571 Test #57: rectarr-03 ............................ Passed 0.23 sec Start 104: drr-c 50/571 Test #313: plm-bsp-mse-h ......................... Passed 0.35 sec Start 113: landmark-warp-a 51/571 Test #98: drr-a ................................. Passed 0.43 sec Start 107: fdk-cpu-a 52/571 Test #74: vf-radial-1 ........................... Passed 0.17 sec Start 110: fdk-cpu-d 53/571 Test #281: plm-reg-itk-translation ............... Passed 0.41 sec Start 118: landmark-warp-b 54/571 Test #67: sphere-7 .............................. Passed 0.19 sec Start 123: landmark-warp-c 55/571 Test #58: rectarr-04 ............................ Passed 0.22 sec Start 129: plm-add-a 56/571 Test #66: sphere-6 .............................. Passed 0.23 sec Start 132: plm-add-b 57/571 Test #90: plm-diff-a ............................ Passed 0.23 sec Start 135: plm-add-vf-a 58/571 Test #439: plm-reg-compose ....................... Passed 0.47 sec Start 138: plm-add-vf-b 59/571 Test #93: plm-diff-b ............................ Passed 0.24 sec Start 141: plm-adjust-a 60/571 Test #113: landmark-warp-a ....................... Passed 0.30 sec Start 144: plm-adjust-b 61/571 Test #123: landmark-warp-c ....................... Passed 0.26 sec Start 147: plm-adjust-c 62/571 Test #129: plm-add-a ............................. Passed 0.26 sec Start 150: plm-adjust-d 63/571 Test #138: plm-add-vf-b .......................... Passed 0.26 sec Start 153: plm-adjust-e 64/571 Test #135: plm-add-vf-a .......................... Passed 0.28 sec Start 156: plm-adjust-f 65/571 Test #118: landmark-warp-b ....................... Passed 0.38 sec Start 159: plm-adjust-g 66/571 Test #132: plm-add-b ............................. Passed 0.41 sec Start 162: plm-adjust-h 67/571 Test #141: plm-adjust-a .......................... Passed 0.40 sec Start 165: plm-adjust-i 68/571 Test #147: plm-adjust-c .......................... Passed 0.24 sec Start 168: plm-adjust-j 69/571 Test #144: plm-adjust-b .......................... Passed 0.34 sec Start 171: plm-boundary-a 70/571 Test #150: plm-adjust-d .......................... Passed 0.33 sec Start 174: plm-boundary-b 71/571 Test #101: drr-b ................................. Passed 0.74 sec Start 177: plm-boundary-c 72/571 Test #104: drr-c ................................. Passed 0.74 sec Start 180: plm-boundary-d 73/571 Test #159: plm-adjust-g .......................... Passed 0.29 sec Start 183: plm-boundary-e 74/571 Test #156: plm-adjust-f .......................... Passed 0.36 sec Start 189: plm-convert-dicom-b 75/571 Test #153: plm-adjust-e .......................... Passed 0.38 sec Start 198: plm-convert-dicom-donut-a 76/571 Test #171: plm-boundary-a ........................ Passed 0.18 sec Start 201: plm-convert-dicom-donut-b 77/571 Test #162: plm-adjust-h .......................... Passed 0.32 sec Start 205: plm-convert-cxt 78/571 Test #174: plm-boundary-b ........................ Passed 0.19 sec Start 209: plm-convert-dose-scale 79/571 Test #177: plm-boundary-c ........................ Passed 0.19 sec Start 212: plm-crop-a 80/571 Test #180: plm-boundary-d ........................ Passed 0.19 sec Start 215: plm-crop-b 81/571 Test #183: plm-boundary-e ........................ Passed 0.19 sec Start 218: plm-crop-c 82/571 Test #165: plm-adjust-i .......................... Passed 0.38 sec Start 252: plm-fill-a 83/571 Test #168: plm-adjust-j .......................... Passed 0.40 sec Start 255: plm-mask-a 84/571 Test #198: plm-convert-dicom-donut-a ............. Passed 0.20 sec Start 258: plm-gamma-a 85/571 Test #189: plm-convert-dicom-b ................... Passed 0.23 sec Start 261: plm-gamma-b 86/571 Test #205: plm-convert-cxt ....................... Passed 0.21 sec Start 268: plm-maximum-a 87/571 Test #201: plm-convert-dicom-donut-b ............. Passed 0.23 sec Start 271: plm-multiply-a 88/571 Test #209: plm-convert-dose-scale ................ Passed 0.19 sec Start 274: plm-multiply-vf-a 89/571 Test #336: plm-bsp-mi-c-2 ........................ Passed 1.45 sec Start 278: plm-reg-align-center 90/571 Test #107: fdk-cpu-a ............................. Passed 1.08 sec Start 284: plm-reg-itk-rigid-a 91/571 Test #215: plm-crop-b ............................ Passed 0.22 sec Start 289: plm-reg-itk-similarity 92/571 Test #212: plm-crop-a ............................ Passed 0.23 sec Start 294: plm-reg-itk-bspline 93/571 Test #252: plm-fill-a ............................ Passed 0.23 sec Start 297: plm-reg-itk-demons 94/571 Test #218: plm-crop-c ............................ Passed 0.25 sec Start 307: plm-bsp-mse-c 95/571 Test #255: plm-mask-a ............................ Passed 0.21 sec Start 310: plm-bsp-mse-g 96/571 Test #261: plm-gamma-b ........................... Passed 0.21 sec Start 316: plm-bsp-mse-i 97/571 Test #268: plm-maximum-a ......................... Passed 0.20 sec Start 319: plm-bsp-mse-k 98/571 Test #271: plm-multiply-a ........................ Passed 0.19 sec Start 322: plm-bsp-mse-l 99/571 Test #274: plm-multiply-vf-a ..................... Passed 0.20 sec Start 333: plm-bsp-mi-c 100/571 Test #278: plm-reg-align-center .................. Passed 0.19 sec Start 339: plm-bsp-mi-k 101/571 Test #258: plm-gamma-a ........................... Passed 0.36 sec Start 342: plm-bsp-gm-k 102/571 Test #307: plm-bsp-mse-c ......................... Passed 0.30 sec Start 347: plm-bsp-openmp 103/571 Test #310: plm-bsp-mse-g ......................... Passed 0.39 sec Start 354: plm-bsp-ushort 104/571 Test #284: plm-reg-itk-rigid-a ................... Passed 0.46 sec Start 357: plm-bsp-double 105/571 Test #319: plm-bsp-mse-k ......................... Passed 0.35 sec Start 361: plm-bsp-char-output 106/571 Test #322: plm-bsp-mse-l ......................... Passed 0.35 sec Start 365: plm-bsp-regularize-none 107/571 Test #316: plm-bsp-mse-i ......................... Passed 0.40 sec Start 368: plm-bsp-regularize-analytic 108/571 Test #289: plm-reg-itk-similarity ................ Passed 0.52 sec Start 371: plm-bsp-regularize-numeric 109/571 Test #333: plm-bsp-mi-c .......................... Passed 0.44 sec Start 375: plm-bsp-landmark-b 110/571 Test #339: plm-bsp-mi-k .......................... Passed 0.48 sec Start 378: plm-bsp-landmark-c 111/571 Test #342: plm-bsp-gm-k .......................... Passed 0.51 sec Start 381: plm-bsp-landmark-d 112/571 Test #347: plm-bsp-openmp ........................ Passed 0.48 sec Start 384: plm-bsp-landmark-e 113/571 Test #361: plm-bsp-char-output ................... Passed 0.39 sec Start 387: plm-bsp-dcos-a 114/571 Test #297: plm-reg-itk-demons .................... Passed 0.84 sec Start 390: plm-bsp-dcos-b 115/571 Test #354: plm-bsp-ushort ........................ Passed 0.50 sec Start 393: plm-bsp-dcos-c 116/571 Test #357: plm-bsp-double ........................ Passed 0.49 sec Start 396: plm-bsp-dcos-d 117/571 Test #375: plm-bsp-landmark-b .................... Passed 0.44 sec Start 399: plm-bsp-dcos-e 118/571 Test #365: plm-bsp-regularize-none ............... Passed 0.67 sec Start 402: plm-bsp-dcos-f 119/571 Test #294: plm-reg-itk-bspline ................... Passed 1.16 sec Start 405: plm-reg-multi-a 120/571 Test #381: plm-bsp-landmark-d .................... Passed 0.46 sec Start 408: plm-reg-multi-b 121/571 Test #378: plm-bsp-landmark-c .................... Passed 0.58 sec Start 411: plm-reg-dv-itk-translation 122/571 Test #384: plm-bsp-landmark-e .................... Passed 0.47 sec Start 420: plm-reg-process-a 123/571 Test #393: plm-bsp-dcos-c ........................ Passed 0.56 sec Start 423: plm-reg-trans-a 124/571 Test #396: plm-bsp-dcos-d ........................ Passed 0.59 sec Start 426: plm-reg-trans-b 125/571 Test #387: plm-bsp-dcos-a ........................ Passed 0.69 sec Start 429: plm-reg-trans-mi-a 126/571 Test #368: plm-bsp-regularize-analytic ........... Passed 1.08 sec Start 432: plm-reg-autores-a 127/571 Test #399: plm-bsp-dcos-e ........................ Passed 0.56 sec Start 435: plm-reg-autores-b 128/571 Test #420: plm-reg-process-a ..................... Passed 0.28 sec Start 440: plm-compose-a 129/571 Test #402: plm-bsp-dcos-f ........................ Passed 0.46 sec Start 444: plm-compose-b 130/571 Test #390: plm-bsp-dcos-b ........................ Passed 0.72 sec Start 448: plm-compose-c 131/571 Test #440: plm-compose-a ......................... Passed 0.19 sec Start 452: plm-resample-a 132/571 Test #444: plm-compose-b ......................... Passed 0.18 sec Start 455: plm-resample-b 133/571 Test #411: plm-reg-dv-itk-translation ............ Passed 0.58 sec Start 458: plm-resample-c 134/571 Test #448: plm-compose-c ......................... Passed 0.30 sec Start 461: plm-scale-a 135/571 Test #432: plm-reg-autores-a ..................... Passed 0.40 sec Start 464: plm-scale-vf-a 136/571 Test #452: plm-resample-a ........................ Passed 0.22 sec Start 470: plm-thumbnail-a 137/571 Test #455: plm-resample-b ........................ Passed 0.28 sec Start 473: plm-thumbnail-b 138/571 Test #21: lung-1 ................................ Passed 3.86 sec Start 192: plm-convert-dicom-c 139/571 Test #435: plm-reg-autores-b ..................... Passed 0.52 sec Start 476: plm-thumbnail-c 140/571 Test #458: plm-resample-c ........................ Passed 0.32 sec Start 479: plm-intersect 141/571 Test #461: plm-scale-a ........................... Passed 0.24 sec Start 482: plm-union 142/571 Test #405: plm-reg-multi-a ....................... Passed 0.99 sec Start 485: plm-threshold-a 143/571 Test #408: plm-reg-multi-b ....................... Passed 0.98 sec Start 488: plm-threshold-b 144/571 Test #464: plm-scale-vf-a ........................ Passed 0.24 sec Start 491: plm-threshold-c 145/571 Test #470: plm-thumbnail-a ....................... Passed 0.22 sec Start 497: plm-warp-a 146/571 Test #473: plm-thumbnail-b ....................... Passed 0.20 sec Start 500: plm-warp-b 147/571 Test #476: plm-thumbnail-c ....................... Passed 0.17 sec Start 505: plm-warp-c 148/571 Test #482: plm-union ............................. Passed 0.18 sec Start 508: plm-warp-d 149/571 Test #479: plm-intersect ......................... Passed 0.20 sec Start 511: plm-warp-f 150/571 Test #485: plm-threshold-a ....................... Passed 0.18 sec Start 514: plm-warp-g 151/571 Test #488: plm-threshold-b ....................... Passed 0.19 sec Start 517: plm-warp-h 152/571 Test #491: plm-threshold-c ....................... Passed 0.20 sec Start 520: plm-warp-i 153/571 Test #500: plm-warp-b ............................ Passed 0.23 sec Start 523: plm-xf-convert-a 154/571 Test #192: plm-convert-dicom-c ................... Passed 0.44 sec Start 527: plm-xf-convert-d-warp-1 155/571 Test #511: plm-warp-f ............................ Passed 0.20 sec Start 530: plm-xf-convert-d-warp-2 156/571 Test #497: plm-warp-a ............................ Passed 0.32 sec Start 536: plm-xf-convert-h 157/571 Test #508: plm-warp-d ............................ Passed 0.23 sec Start 539: xf-invert-vf-zero-1 158/571 Test #514: plm-warp-g ............................ Passed 0.22 sec Start 542: xf-invert-vf-trans-1 159/571 Test #517: plm-warp-h ............................ Passed 0.20 sec Start 549: proton-dose-1 160/571 Test #22: lung-2 ................................ Passed 4.02 sec Start 552: proton-dose-4a 161/571 Test #505: plm-warp-c ............................ Passed 0.35 sec Start 555: proton-dose-4d 162/571 Test #523: plm-xf-convert-a ...................... Passed 0.14 sec Start 558: proton-dose-5a 163/571 Test #520: plm-warp-i ............................ Passed 0.24 sec Start 561: proton-dose-5d 164/571 Test #527: plm-xf-convert-d-warp-1 ............... Passed 0.21 sec Start 564: proton-dose-6a 165/571 Test #536: plm-xf-convert-h ...................... Passed 0.20 sec Start 38: rect-10 166/571 Test #542: xf-invert-vf-trans-1 .................. Passed 0.23 sec Start 41: rect-11 167/571 Test #539: xf-invert-vf-zero-1 ................... Passed 0.31 sec Start 50: rect-19 168/571 Test #38: rect-10 ............................... Passed 0.15 sec Start 52: rectarr-01 169/571 Test #530: plm-xf-convert-d-warp-2 ............... Passed 0.39 sec Start 53: rectarr-02 170/571 Test #41: rect-11 ............................... Passed 0.14 sec Start 54: rectarr-m-01 171/571 Test #50: rect-19 ............................... Passed 0.14 sec Start 55: rectarr-m-02 172/571 Test #54: rectarr-m-01 .......................... Passed 0.15 sec Start 60: roi-1 173/571 Test #371: plm-bsp-regularize-numeric ............ Passed 2.57 sec Start 64: sphere-4 174/571 Test #52: rectarr-01 ............................ Passed 0.20 sec Start 76: vf-zero-stats 175/571 Test #53: rectarr-02 ............................ Passed 0.19 sec Start 78: vf-trans-1-stats 176/571 Test #423: plm-reg-trans-a ....................... Passed 1.63 sec Start 80: vf-trans-2-stats 177/571 Test #55: rectarr-m-02 .......................... Passed 0.18 sec Start 82: vf-radial-1-stats 178/571 Test #60: roi-1 ................................. Passed 0.13 sec Start 84: plm-compare-a 179/571 Test #426: plm-reg-trans-b ....................... Passed 1.69 sec Start 86: plm-compare-b 180/571 Test #64: sphere-4 .............................. Passed 0.14 sec Start 88: plm-compare-c 181/571 Test #78: vf-trans-1-stats ...................... Passed 0.16 sec Start 91: plm-diff-a-stats 182/571 Test #76: vf-zero-stats ......................... Passed 0.18 sec Start 94: plm-diff-b-stats 183/571 Test #80: vf-trans-2-stats ...................... Passed 0.20 sec Start 96: demons-a 184/571 Test #82: vf-radial-1-stats ..................... Passed 0.19 sec Start 99: drr-a-stats 185/571 Test #91: plm-diff-a-stats ...................... Passed 0.13 sec Start 102: drr-b-stats 186/571 Test #86: plm-compare-b ......................... Passed 0.17 sec Start 105: drr-c-stats 187/571 Test #84: plm-compare-a ......................... Passed 0.19 sec Start 108: fdk-cpu-a-stats 188/571 Test #88: plm-compare-c ......................... Passed 0.19 sec Start 114: landmark-warp-a-stats-1 189/571 Test #94: plm-diff-b-stats ...................... Passed 0.18 sec Start 116: landmark-warp-a-stats-2 190/571 Test #99: drr-a-stats ........................... Passed 0.10 sec Start 119: landmark-warp-b-stats-1 191/571 Test #102: drr-b-stats ........................... Passed 0.12 sec Start 121: landmark-warp-b-stats-2 192/571 Test #105: drr-c-stats ........................... Passed 0.13 sec Start 124: landmark-warp-c-stats-1 193/571 Test #114: landmark-warp-a-stats-1 ............... Passed 0.13 sec Start 126: landmark-warp-c-stats-2 194/571 Test #119: landmark-warp-b-stats-1 ............... Passed 0.13 sec Start 130: plm-add-a-stats 195/571 Test #110: fdk-cpu-d ............................. Passed 4.68 sec Start 111: fdk-cpu-d-stats 196/571 Test #116: landmark-warp-a-stats-2 ............... Passed 0.19 sec Start 133: plm-add-b-stats 197/571 Test #108: fdk-cpu-a-stats ....................... Passed 0.26 sec Start 136: plm-add-vf-a-stats 198/571 Test #121: landmark-warp-b-stats-2 ............... Passed 0.19 sec Start 139: plm-add-vf-b-stats 199/571 Test #124: landmark-warp-c-stats-1 ............... Passed 0.18 sec Start 142: plm-adjust-a-stats 200/571 Test #126: landmark-warp-c-stats-2 ............... Passed 0.15 sec Start 145: plm-adjust-b-stats 201/571 Test #130: plm-add-a-stats ....................... Passed 0.16 sec Start 148: plm-adjust-c-stats 202/571 Test #111: fdk-cpu-d-stats ....................... Passed 0.20 sec Start 151: plm-adjust-d-stats 203/571 Test #133: plm-add-b-stats ....................... Passed 0.19 sec Start 154: plm-adjust-e-stats 204/571 Test #136: plm-add-vf-a-stats .................... Passed 0.17 sec Start 157: plm-adjust-f-stats 205/571 Test #96: demons-a .............................. Passed 0.52 sec Start 160: plm-adjust-g-stats 206/571 Test #139: plm-add-vf-b-stats .................... Passed 0.18 sec Start 163: plm-adjust-h-stats 207/571 Test #142: plm-adjust-a-stats .................... Passed 0.18 sec Start 166: plm-adjust-i-stats 208/571 Test #145: plm-adjust-b-stats .................... Passed 0.18 sec Start 169: plm-adjust-j-stats 209/571 Test #148: plm-adjust-c-stats .................... Passed 0.19 sec Start 172: plm-boundary-a-stats 210/571 Test #163: plm-adjust-h-stats .................... Passed 0.12 sec Start 175: plm-boundary-b-stats 211/571 Test #151: plm-adjust-d-stats .................... Passed 0.19 sec Start 178: plm-boundary-c-stats 212/571 Test #166: plm-adjust-i-stats .................... Passed 0.13 sec Start 181: plm-boundary-d-stats 213/571 Test #157: plm-adjust-f-stats .................... Passed 0.18 sec Start 184: plm-boundary-e-stats 214/571 Test #154: plm-adjust-e-stats .................... Passed 0.20 sec Start 187: plm-convert-dicom-a-stats 215/571 Test #160: plm-adjust-g-stats .................... Passed 0.19 sec Start 190: plm-convert-dicom-b-stats 216/571 Test #169: plm-adjust-j-stats .................... Passed 0.16 sec Start 193: plm-convert-dicom-c-stats 217/571 Test #549: proton-dose-1 ......................... Passed 1.55 sec Start 199: plm-convert-dicom-donut-a-stats 218/571 Test #172: plm-boundary-a-stats .................. Passed 0.17 sec Start 202: plm-convert-dicom-donut-b-stats 219/571 Test #190: plm-convert-dicom-b-stats ............. Passed 0.08 sec Start 206: plm-convert-cxt-stats 220/571 Test #181: plm-boundary-d-stats .................. Passed 0.13 sec Start 208: plm-convert-prefix-fcsv 221/571 Test #184: plm-boundary-e-stats .................. Passed 0.17 sec Start 210: plm-convert-dose-scale-stats 222/571 Test #175: plm-boundary-b-stats .................. Passed 0.20 sec Start 213: plm-crop-a-stats 223/571 Test #178: plm-boundary-c-stats .................. Passed 0.20 sec Start 216: plm-crop-b-stats 224/571 Test #202: plm-convert-dicom-donut-b-stats ....... Passed 0.13 sec Start 219: plm-crop-c-stats 225/571 Test #187: plm-convert-dicom-a-stats ............. Passed 0.22 sec Start 221: plm-dice-a 226/571 Test #193: plm-convert-dicom-c-stats ............. Passed 0.21 sec Start 223: plm-dice-b 227/571 Test #199: plm-convert-dicom-donut-a-stats ....... Passed 0.18 sec Start 225: plm-dice-c 228/571 Test #206: plm-convert-cxt-stats ................. Passed 0.21 sec Start 231: plm-dice-d 229/571 Test #213: plm-crop-a-stats ...................... Passed 0.18 sec Start 237: plm-dice-e 230/571 Test #221: plm-dice-a ............................ Passed 0.13 sec Start 240: plm-dice-f 231/571 Test #219: plm-crop-c-stats ...................... Passed 0.14 sec Start 244: plm-dmap-b 232/571 Test #210: plm-convert-dose-scale-stats .......... Passed 0.20 sec Start 246: plm-dvh-a 233/571 Test #216: plm-crop-b-stats ...................... Passed 0.20 sec Start 249: plm-dvh-b 234/571 Test #223: plm-dice-b ............................ Passed 0.17 sec Start 253: plm-fill-a-stats 235/571 Test #225: plm-dice-c ............................ Passed 0.15 sec Start 256: plm-mask-a-stats 236/571 Test #208: plm-convert-prefix-fcsv ............... Passed 0.33 sec Start 259: plm-gamma-a-stats 237/571 Test #231: plm-dice-d ............................ Passed 0.15 sec Start 262: plm-gamma-b-stats 238/571 Test #240: plm-dice-f ............................ Passed 0.18 sec Start 264: plm-gamma-c 239/571 Test #249: plm-dvh-b ............................. Passed 0.19 sec Start 266: plm-gamma-d 240/571 Test #237: plm-dice-e ............................ Passed 0.22 sec Start 269: plm-maximum-a-stats 241/571 Test #253: plm-fill-a-stats ...................... Passed 0.17 sec Start 272: plm-multiply-a-stats 242/571 Test #244: plm-dmap-b ............................ Passed 0.21 sec Start 275: plm-multiply-vf-a-stats 243/571 Test #246: plm-dvh-a ............................. Passed 0.21 sec Start 279: plm-reg-align-center-stats 244/571 Test #256: plm-mask-a-stats ...................... Passed 0.17 sec Start 282: plm-reg-itk-translation-stats 245/571 Test #262: plm-gamma-b-stats ..................... Passed 0.18 sec Start 285: plm-reg-itk-rigid-a-stats-1 246/571 Test #259: plm-gamma-a-stats ..................... Passed 0.18 sec Start 287: plm-reg-itk-rigid-a-stats-2 247/571 Test #269: plm-maximum-a-stats ................... Passed 0.14 sec Start 290: plm-reg-itk-similarity-stats-1 248/571 Test #266: plm-gamma-d ........................... Passed 0.18 sec Start 292: plm-reg-itk-similarity-stats-2 249/571 Test #279: plm-reg-align-center-stats ............ Passed 0.18 sec Start 295: plm-reg-itk-bspline-stats-1 250/571 Test #282: plm-reg-itk-translation-stats ......... Passed 0.18 sec Start 299: plm-reg-itk-demons-stats-2 251/571 Test #272: plm-multiply-a-stats .................. Passed 0.20 sec Start 301: plm-reg-itk-demons-diff 252/571 Test #275: plm-multiply-vf-a-stats ............... Passed 0.20 sec Start 303: plm-reg-itk-demons-logd 253/571 Test #287: plm-reg-itk-rigid-a-stats-2 ........... Passed 0.17 sec Start 305: plm-reg-itk-demons-sym-logd 254/571 Test #264: plm-gamma-c ........................... Passed 0.27 sec Start 308: plm-bsp-mse-c-stats 255/571 Test #285: plm-reg-itk-rigid-a-stats-1 ........... Passed 0.19 sec Start 311: plm-bsp-mse-g-stats 256/571 Test #290: plm-reg-itk-similarity-stats-1 ........ Passed 0.16 sec Start 314: plm-bsp-mse-h-stats 257/571 Test #295: plm-reg-itk-bspline-stats-1 ........... Passed 0.14 sec Start 317: plm-bsp-mse-i-stats 258/571 Test #292: plm-reg-itk-similarity-stats-2 ........ Passed 0.17 sec Start 320: plm-bsp-mse-k-stats 259/571 Test #299: plm-reg-itk-demons-stats-2 ............ Passed 0.18 sec Start 323: plm-bsp-mse-l-stats 260/571 Test #308: plm-bsp-mse-c-stats ................... Passed 0.18 sec Start 325: plm-bsp-mse-o 261/571 Test #311: plm-bsp-mse-g-stats ................... Passed 0.18 sec Start 327: plm-bsp-mse-p 262/571 Test #314: plm-bsp-mse-h-stats ................... Passed 0.19 sec Start 329: plm-bsp-mse-q 263/571 Test #317: plm-bsp-mse-i-stats ................... Passed 0.19 sec Start 331: plm-bsp-mse-r 264/571 Test #320: plm-bsp-mse-k-stats ................... Passed 0.19 sec Start 334: plm-bsp-mi-c-stats 265/571 Test #323: plm-bsp-mse-l-stats ................... Passed 0.18 sec Start 337: plm-bsp-mi-c-2-stats 266/571 Test #552: proton-dose-4a ........................ Passed 2.71 sec Start 340: plm-bsp-mi-k-stats 267/571 Test #334: plm-bsp-mi-c-stats .................... Passed 0.20 sec Start 343: plm-bsp-gm-k-stats 268/571 Test #325: plm-bsp-mse-o ......................... Passed 0.33 sec Start 345: plm-bsp-sm-multi-a 269/571 Test #327: plm-bsp-mse-p ......................... Passed 0.39 sec Start 348: plm-bsp-openmp-stats 270/571 Test #337: plm-bsp-mi-c-2-stats .................. Passed 0.26 sec Start 350: plm-bsp-resume 271/571 Test #329: plm-bsp-mse-q ......................... Passed 0.34 sec Start 352: plm-bsp-logfile 272/571 Test #331: plm-bsp-mse-r ......................... Passed 0.37 sec Start 355: plm-bsp-ushort-stats 273/571 Test #340: plm-bsp-mi-k-stats .................... Passed 0.23 sec Start 358: plm-bsp-double-stats 274/571 Test #343: plm-bsp-gm-k-stats .................... Passed 0.22 sec Start 362: plm-bsp-char-output-stats 275/571 Test #348: plm-bsp-openmp-stats .................. Passed 0.20 sec Start 364: plm-bsp-rect 276/571 Test #303: plm-reg-itk-demons-logd ............... Passed 0.81 sec Start 366: plm-bsp-regularize-none-stats 277/571 Test #355: plm-bsp-ushort-stats .................. Passed 0.22 sec Start 369: plm-bsp-regularize-analytic-stats 278/571 Test #358: plm-bsp-double-stats .................. Passed 0.22 sec Start 372: plm-bsp-regularize-numeric-stats 279/571 Test #429: plm-reg-trans-mi-a .................... Passed 4.22 sec Start 376: plm-bsp-landmark-b-stats 280/571 Test #345: plm-bsp-sm-multi-a .................... Passed 0.42 sec Start 379: plm-bsp-landmark-c-stats 281/571 Test #362: plm-bsp-char-output-stats ............. Passed 0.21 sec Start 382: plm-bsp-landmark-d-stats 282/571 Test #350: plm-bsp-resume ........................ Passed 0.35 sec Start 385: plm-bsp-landmark-e-stats 283/571 Test #366: plm-bsp-regularize-none-stats ......... Passed 0.22 sec Start 388: plm-bsp-dcos-a-stats 284/571 Test #301: plm-reg-itk-demons-diff ............... Passed 1.05 sec Start 391: plm-bsp-dcos-b-stats 285/571 Test #352: plm-bsp-logfile ....................... Passed 0.42 sec Start 394: plm-bsp-dcos-c-stats 286/571 Test #369: plm-bsp-regularize-analytic-stats ..... Passed 0.21 sec Start 397: plm-bsp-dcos-d-stats 287/571 Test #372: plm-bsp-regularize-numeric-stats ...... Passed 0.19 sec Start 400: plm-bsp-dcos-e-stats 288/571 Test #382: plm-bsp-landmark-d-stats .............. Passed 0.18 sec Start 403: plm-bsp-dcos-f-stats 289/571 Test #379: plm-bsp-landmark-c-stats .............. Passed 0.19 sec Start 406: plm-reg-multi-a-stats 290/571 Test #376: plm-bsp-landmark-b-stats .............. Passed 0.21 sec Start 409: plm-reg-multi-b-stats 291/571 Test #385: plm-bsp-landmark-e-stats .............. Passed 0.20 sec Start 412: plm-reg-dv-itk-translation-stats 292/571 Test #364: plm-bsp-rect .......................... Passed 0.39 sec Start 421: plm-reg-process-a-stats 293/571 Test #388: plm-bsp-dcos-a-stats .................. Passed 0.17 sec Start 424: plm-reg-trans-a-stats 294/571 Test #394: plm-bsp-dcos-c-stats .................. Passed 0.19 sec Start 427: plm-reg-trans-b-stats 295/571 Test #391: plm-bsp-dcos-b-stats .................. Passed 0.23 sec Start 430: plm-reg-trans-mi-a-stats 296/571 Test #397: plm-bsp-dcos-d-stats .................. Passed 0.19 sec Start 433: plm-reg-autores-a-stats 297/571 Test #305: plm-reg-itk-demons-sym-logd ........... Passed 1.28 sec Start 436: plm-reg-autores-b-stats 298/571 Test #412: plm-reg-dv-itk-translation-stats ...... Passed 0.16 sec Start 442: plm-compose-a-stats 299/571 Test #406: plm-reg-multi-a-stats ................. Passed 0.18 sec Start 446: plm-compose-b-stats 300/571 Test #400: plm-bsp-dcos-e-stats .................. Passed 0.21 sec Start 450: plm-compose-c-stats 301/571 Test #403: plm-bsp-dcos-f-stats .................. Passed 0.20 sec Start 453: plm-resample-a-stats 302/571 Test #409: plm-reg-multi-b-stats ................. Passed 0.20 sec Start 456: plm-resample-b-stats 303/571 Test #424: plm-reg-trans-a-stats ................. Passed 0.17 sec Start 459: plm-resample-c-stats 304/571 Test #421: plm-reg-process-a-stats ............... Passed 0.20 sec Start 462: plm-scale-a-stats 305/571 Test #427: plm-reg-trans-b-stats ................. Passed 0.20 sec Start 465: plm-scale-vf-a-stats 306/571 Test #430: plm-reg-trans-mi-a-stats .............. Passed 0.18 sec Start 467: plm-sift-a 307/571 Test #446: plm-compose-b-stats ................... Passed 0.13 sec Start 471: plm-thumbnail-a-stats 308/571 Test #433: plm-reg-autores-a-stats ............... Passed 0.18 sec Start 474: plm-thumbnail-b-stats 309/571 Test #436: plm-reg-autores-b-stats ............... Passed 0.18 sec Start 477: plm-thumbnail-c-stats 310/571 Test #450: plm-compose-c-stats ................... Passed 0.17 sec Start 480: plm-intersect-stats 311/571 Test #442: plm-compose-a-stats ................... Passed 0.18 sec Start 483: plm-union-stats 312/571 Test #459: plm-resample-c-stats .................. Passed 0.14 sec Start 486: plm-threshold-a-stats 313/571 Test #453: plm-resample-a-stats .................. Passed 0.18 sec Start 489: plm-threshold-b-stats 314/571 Test #456: plm-resample-b-stats .................. Passed 0.18 sec Start 492: plm-threshold-c-stats 315/571 Test #462: plm-scale-a-stats ..................... Passed 0.17 sec Start 498: plm-warp-a-stats 316/571 Test #555: proton-dose-4d ........................ Passed 3.77 sec Start 501: plm-warp-b-stats-1 317/571 Test #465: plm-scale-vf-a-stats .................. Passed 0.19 sec Start 503: plm-warp-b-stats-2 318/571 Test #471: plm-thumbnail-a-stats ................. Passed 0.17 sec Start 506: plm-warp-c-stats 319/571 Test #474: plm-thumbnail-b-stats ................. Passed 0.17 sec Start 509: plm-warp-d-stats 320/571 Test #477: plm-thumbnail-c-stats ................. Passed 0.18 sec Start 512: plm-warp-f-stats-1 321/571 Test #483: plm-union-stats ....................... Passed 0.19 sec Start 515: plm-warp-g-stats-1 322/571 Test #489: plm-threshold-b-stats ................. Passed 0.19 sec Start 518: plm-warp-h-stats-1 323/571 Test #480: plm-intersect-stats ................... Passed 0.20 sec Start 521: plm-warp-i-stats-1 324/571 Test #486: plm-threshold-a-stats ................. Passed 0.20 sec Start 524: plm-xf-convert-b 325/571 Test #498: plm-warp-a-stats ...................... Passed 0.19 sec Start 528: plm-xf-convert-d-warp-1-stats 326/571 Test #492: plm-threshold-c-stats ................. Passed 0.22 sec Start 531: plm-xf-convert-d-warp-2-stats 327/571 Test #501: plm-warp-b-stats-1 .................... Passed 0.18 sec Start 537: plm-xf-convert-h-stats 328/571 Test #503: plm-warp-b-stats-2 .................... Passed 0.16 sec Start 540: xf-invert-vf-zero-1-stats 329/571 Test #506: plm-warp-c-stats ...................... Passed 0.20 sec Start 543: xf-invert-vf-trans-1-stats 330/571 Test #512: plm-warp-f-stats-1 .................... Passed 0.19 sec Start 545: xf-invert-vrs-a 331/571 Test #509: plm-warp-d-stats ...................... Passed 0.20 sec Start 547: xf-invert-vrs-b 332/571 Test #524: plm-xf-convert-b ...................... Passed 0.14 sec Start 550: proton-dose-1-stats 333/571 Test #515: plm-warp-g-stats-1 .................... Passed 0.18 sec Start 553: proton-dose-4a-stats 334/571 Test #518: plm-warp-h-stats-1 .................... Passed 0.18 sec Start 556: proton-dose-4d-stats 335/571 Test #564: proton-dose-6a ........................ Passed 3.97 sec Start 565: proton-dose-6a-stats 336/571 Test #521: plm-warp-i-stats-1 .................... Passed 0.19 sec Start 569: wed-a 337/571 Test #528: plm-xf-convert-d-warp-1-stats ......... Passed 0.15 sec Start 16: gauss-7 338/571 Test #531: plm-xf-convert-d-warp-2-stats ......... Passed 0.15 sec Start 23: gw-lung-a 339/571 Test #537: plm-xf-convert-h-stats ................ Passed 0.20 sec Start 24: gw-lung-b 340/571 Test #545: xf-invert-vrs-a ....................... Passed 0.12 sec Start 25: gw-lung-c 341/571 Test #540: xf-invert-vf-zero-1-stats ............. Passed 0.19 sec Start 34: rect-6 342/571 Test #547: xf-invert-vrs-b ....................... Passed 0.14 sec Start 35: rect-7 343/571 Test #558: proton-dose-5a ........................ Passed 4.19 sec Start 559: proton-dose-5a-stats 344/571 Test #550: proton-dose-1-stats ................... Passed 0.17 sec Start 40: rect-10-roi-2 345/571 Test #543: xf-invert-vf-trans-1-stats ............ Passed 0.19 sec Start 49: rect-18 346/571 Test #16: gauss-7 ............................... Passed 0.14 sec Start 59: rgc-1 347/571 Test #556: proton-dose-4d-stats .................. Passed 0.18 sec Start 68: xramp-1 348/571 Test #553: proton-dose-4a-stats .................. Passed 0.21 sec Start 69: yramp-1 349/571 Test #565: proton-dose-6a-stats .................. Passed 0.21 sec Start 70: zramp-1 350/571 Test #23: gw-lung-a ............................. Passed 0.20 sec Start 75: vf-gaussian-1 351/571 Test #34: rect-6 ................................ Passed 0.15 sec Start 77: vf-zero-check 352/571 Test #35: rect-7 ................................ Passed 0.14 sec Start 79: vf-trans-1-check 353/571 Test #24: gw-lung-b ............................. Passed 0.18 sec Start 81: vf-trans-2-check 354/571 Test #77: vf-zero-check ......................... Passed 0.02 sec Start 83: vf-radial-1-check 355/571 Test #40: rect-10-roi-2 ......................... Passed 0.13 sec Start 85: plm-compare-a-check 356/571 Test #79: vf-trans-1-check ...................... Passed 0.02 sec Start 87: plm-compare-b-check 357/571 Test #81: vf-trans-2-check ...................... Passed 0.01 sec Start 89: plm-compare-c-check 358/571 Test #25: gw-lung-c ............................. Passed 0.19 sec Start 92: plm-diff-a-check 359/571 Test #83: vf-radial-1-check ..................... Passed 0.02 sec Start 95: plm-diff-b-check 360/571 Test #85: plm-compare-a-check ................... Passed 0.02 sec Start 97: demons-a-check 361/571 Test #87: plm-compare-b-check ................... Passed 0.02 sec Start 100: drr-a-check 362/571 Test #49: rect-18 ............................... Passed 0.13 sec Start 103: drr-b-check 363/571 Test #89: plm-compare-c-check ................... Passed 0.02 sec Start 106: drr-c-check 364/571 Test #92: plm-diff-a-check ...................... Passed 0.01 sec Start 109: fdk-cpu-a-check 365/571 Test #95: plm-diff-b-check ...................... Passed 0.01 sec Start 112: fdk-cpu-d-check 366/571 Test #97: demons-a-check ........................ Passed 0.01 sec Start 115: landmark-warp-a-check-1 367/571 Test #100: drr-a-check ........................... Passed 0.02 sec Start 117: landmark-warp-a-check-2 368/571 Test #559: proton-dose-5a-stats .................. Passed 0.17 sec Start 120: landmark-warp-b-check-1 369/571 Test #103: drr-b-check ........................... Passed 0.02 sec Start 122: landmark-warp-b-check-2 370/571 Test #106: drr-c-check ........................... Passed 0.02 sec Start 125: landmark-warp-c-check-1 371/571 Test #109: fdk-cpu-a-check ....................... Passed 0.02 sec Start 127: landmark-warp-c-check-2 372/571 Test #112: fdk-cpu-d-check ....................... Passed 0.02 sec Start 128: landmark-warp-d 373/571 Test #115: landmark-warp-a-check-1 ............... Passed 0.02 sec Start 131: plm-add-a-check 374/571 Test #117: landmark-warp-a-check-2 ............... Passed 0.02 sec Start 134: plm-add-b-check 375/571 Test #59: rgc-1 ................................. Passed 0.16 sec Start 137: plm-add-vf-a-check 376/571 Test #120: landmark-warp-b-check-1 ............... Passed 0.02 sec Start 140: plm-add-vf-b-check 377/571 Test #68: xramp-1 ............................... Passed 0.14 sec Start 143: plm-adjust-a-check 378/571 Test #122: landmark-warp-b-check-2 ............... Passed 0.02 sec Start 146: plm-adjust-b-check 379/571 Test #125: landmark-warp-c-check-1 ............... Passed 0.02 sec Start 149: plm-adjust-c-check 380/571 Test #127: landmark-warp-c-check-2 ............... Passed 0.02 sec Start 152: plm-adjust-d-check 381/571 Test #131: plm-add-a-check ....................... Passed 0.02 sec Start 155: plm-adjust-e-check 382/571 Test #134: plm-add-b-check ....................... Passed 0.02 sec Start 158: plm-adjust-f-check 383/571 Test #137: plm-add-vf-a-check .................... Passed 0.02 sec Start 161: plm-adjust-g-check 384/571 Test #140: plm-add-vf-b-check .................... Passed 0.02 sec Start 164: plm-adjust-h-check 385/571 Test #143: plm-adjust-a-check .................... Passed 0.02 sec Start 167: plm-adjust-i-check 386/571 Test #146: plm-adjust-b-check .................... Passed 0.02 sec Start 170: plm-adjust-j-check 387/571 Test #149: plm-adjust-c-check .................... Passed 0.02 sec Start 173: plm-boundary-a-check 388/571 Test #152: plm-adjust-d-check .................... Passed 0.02 sec Start 176: plm-boundary-b-check 389/571 Test #155: plm-adjust-e-check .................... Passed 0.02 sec Start 179: plm-boundary-c-check 390/571 Test #158: plm-adjust-f-check .................... Passed 0.02 sec Start 182: plm-boundary-d-check 391/571 Test #161: plm-adjust-g-check .................... Passed 0.02 sec Start 185: plm-boundary-e-check 392/571 Test #69: yramp-1 ............................... Passed 0.15 sec Start 188: plm-convert-dicom-a-check 393/571 Test #164: plm-adjust-h-check .................... Passed 0.02 sec Start 191: plm-convert-dicom-b-check 394/571 Test #70: zramp-1 ............................... Passed 0.15 sec Start 194: plm-convert-dicom-c-check 395/571 Test #167: plm-adjust-i-check .................... Passed 0.02 sec Start 195: plm-convert-dicom-d 396/571 Test #170: plm-adjust-j-check .................... Passed 0.02 sec Start 196: plm-convert-dicom-e 397/571 Test #173: plm-boundary-a-check .................. Passed 0.02 sec Start 197: plm-convert-dicom-f 398/571 Test #176: plm-boundary-b-check .................. Passed 0.02 sec Start 200: plm-convert-dicom-donut-a-check 399/571 Test #179: plm-boundary-c-check .................. Passed 0.02 sec Start 203: plm-convert-dicom-donut-b-check 400/571 Test #75: vf-gaussian-1 ......................... Passed 0.15 sec Start 204: plm-convert-dicom-donut-c 401/571 Test #182: plm-boundary-d-check .................. Passed 0.02 sec Start 207: plm-convert-cxt-check 402/571 Test #185: plm-boundary-e-check .................. Passed 0.02 sec Start 211: plm-convert-dose-scale-check 403/571 Test #188: plm-convert-dicom-a-check ............. Passed 0.02 sec Start 214: plm-crop-a-check-1 404/571 Test #191: plm-convert-dicom-b-check ............. Passed 0.02 sec Start 217: plm-crop-b-check-1 405/571 Test #194: plm-convert-dicom-c-check ............. Passed 0.02 sec Start 220: plm-crop-c-check-1 406/571 Test #200: plm-convert-dicom-donut-a-check ....... Passed 0.02 sec Start 222: plm-dice-a-check-1 407/571 Test #203: plm-convert-dicom-donut-b-check ....... Passed 0.02 sec Start 224: plm-dice-b-check-1 408/571 Test #207: plm-convert-cxt-check ................. Passed 0.02 sec Start 226: plm-dice-c-check-1 409/571 Test #211: plm-convert-dose-scale-check .......... Passed 0.02 sec Start 227: plm-dice-c-check-2 410/571 Test #214: plm-crop-a-check-1 .................... Passed 0.02 sec Start 228: plm-dice-c-check-3 411/571 Test #217: plm-crop-b-check-1 .................... Passed 0.01 sec Start 229: plm-dice-c-check-4 412/571 Test #220: plm-crop-c-check-1 .................... Passed 0.02 sec Start 230: plm-dice-c-check-5 413/571 Test #222: plm-dice-a-check-1 .................... Passed 0.01 sec Start 232: plm-dice-d-check-1 414/571 Test #224: plm-dice-b-check-1 .................... Passed 0.01 sec Start 233: plm-dice-d-check-2 415/571 Test #226: plm-dice-c-check-1 .................... Passed 0.01 sec Start 234: plm-dice-d-check-3 416/571 Test #227: plm-dice-c-check-2 .................... Passed 0.02 sec Start 235: plm-dice-d-check-4 417/571 Test #228: plm-dice-c-check-3 .................... Passed 0.02 sec Start 236: plm-dice-d-check-5 418/571 Test #229: plm-dice-c-check-4 .................... Passed 0.02 sec Start 238: plm-dice-e-check-1 419/571 Test #232: plm-dice-d-check-1 .................... Passed 0.01 sec Start 239: plm-dice-e-check-2 420/571 Test #230: plm-dice-c-check-5 .................... Passed 0.02 sec Start 241: plm-dice-f-check-1 421/571 Test #233: plm-dice-d-check-2 .................... Passed 0.02 sec Start 242: plm-dice-f-check-2 422/571 Test #234: plm-dice-d-check-3 .................... Passed 0.02 sec Start 243: plm-dmap-a 423/571 Test #235: plm-dice-d-check-4 .................... Passed 0.02 sec Start 245: plm-dmap-c 424/571 Test #236: plm-dice-d-check-5 .................... Passed 0.02 sec Start 247: plm-dvh-a-check-1 425/571 Test #238: plm-dice-e-check-1 .................... Passed 0.02 sec Start 248: plm-dvh-a-check-2 426/571 Test #239: plm-dice-e-check-2 .................... Passed 0.02 sec Start 250: plm-dvh-b-check-1 427/571 Test #241: plm-dice-f-check-1 .................... Passed 0.01 sec Start 251: plm-dvh-b-check-2 428/571 Test #242: plm-dice-f-check-2 .................... Passed 0.01 sec Start 254: plm-fill-a-check 429/571 Test #247: plm-dvh-a-check-1 ..................... Passed 0.01 sec Start 257: plm-mask-a-check 430/571 Test #248: plm-dvh-a-check-2 ..................... Passed 0.02 sec Start 260: plm-gamma-a-check 431/571 Test #250: plm-dvh-b-check-1 ..................... Passed 0.01 sec Start 263: plm-gamma-b-check 432/571 Test #251: plm-dvh-b-check-2 ..................... Passed 0.02 sec Start 265: plm-gamma-c-check 433/571 Test #254: plm-fill-a-check ...................... Passed 0.02 sec Start 267: plm-gamma-d-check 434/571 Test #257: plm-mask-a-check ...................... Passed 0.02 sec Start 270: plm-maximum-a-check 435/571 Test #260: plm-gamma-a-check ..................... Passed 0.02 sec Start 273: plm-multiply-a-check 436/571 Test #263: plm-gamma-b-check ..................... Passed 0.02 sec Start 276: plm-multiply-vf-a-check 437/571 Test #265: plm-gamma-c-check ..................... Passed 0.02 sec Start 277: plm-usage 438/571 Test #267: plm-gamma-d-check ..................... Passed 0.02 sec Start 280: plm-reg-align-center-check 439/571 Test #270: plm-maximum-a-check ................... Passed 0.02 sec Start 283: plm-reg-itk-translation-check 440/571 Test #128: landmark-warp-d ....................... Passed 0.18 sec Start 286: plm-reg-itk-rigid-a-check-1 441/571 Test #273: plm-multiply-a-check .................. Passed 0.02 sec Start 288: plm-reg-itk-rigid-a-check-2 442/571 Test #276: plm-multiply-vf-a-check ............... Passed 0.02 sec Start 291: plm-reg-itk-similarity-check-1 443/571 Test #280: plm-reg-align-center-check ............ Passed 0.02 sec Start 293: plm-reg-itk-similarity-check-2 444/571 Test #195: plm-convert-dicom-d ................... Passed 0.13 sec Start 296: plm-reg-itk-bspline-check-1 445/571 Test #283: plm-reg-itk-translation-check ......... Passed 0.02 sec Start 298: plm-reg-itk-demons-check-1 446/571 Test #286: plm-reg-itk-rigid-a-check-1 ........... Passed 0.02 sec Start 300: plm-reg-itk-demons-check-2 447/571 Test #288: plm-reg-itk-rigid-a-check-2 ........... Passed 0.02 sec Start 302: plm-reg-itk-demons-diff-check-1 448/571 Test #291: plm-reg-itk-similarity-check-1 ........ Passed 0.02 sec Start 304: plm-reg-itk-demons-logd-check-1 449/571 Test #293: plm-reg-itk-similarity-check-2 ........ Passed 0.01 sec Start 306: plm-reg-itk-demons-sym-logd-check-1 450/571 Test #296: plm-reg-itk-bspline-check-1 ........... Passed 0.01 sec Start 309: plm-bsp-mse-c-check 451/571 Test #298: plm-reg-itk-demons-check-1 ............ Passed 0.02 sec Start 312: plm-bsp-mse-g-check 452/571 Test #300: plm-reg-itk-demons-check-2 ............ Passed 0.01 sec Start 315: plm-bsp-mse-h-check 453/571 Test #302: plm-reg-itk-demons-diff-check-1 ....... Passed 0.01 sec Start 318: plm-bsp-mse-i-check 454/571 Test #304: plm-reg-itk-demons-logd-check-1 ....... Passed 0.01 sec Start 321: plm-bsp-mse-k-check 455/571 Test #306: plm-reg-itk-demons-sym-logd-check-1 ... Passed 0.02 sec Start 324: plm-bsp-mse-l-check 456/571 Test #309: plm-bsp-mse-c-check ................... Passed 0.02 sec Start 326: plm-bsp-mse-o-stats 457/571 Test #312: plm-bsp-mse-g-check ................... Passed 0.02 sec Start 328: plm-bsp-mse-p-stats 458/571 Test #315: plm-bsp-mse-h-check ................... Passed 0.01 sec Start 330: plm-bsp-mse-q-stats 459/571 Test #318: plm-bsp-mse-i-check ................... Passed 0.01 sec Start 332: plm-bsp-mse-r-stats 460/571 Test #321: plm-bsp-mse-k-check ................... Passed 0.01 sec Start 335: plm-bsp-mi-c-check 461/571 Test #324: plm-bsp-mse-l-check ................... Passed 0.01 sec Start 338: plm-bsp-mi-c-2-check 462/571 Test #197: plm-convert-dicom-f ................... Passed 0.18 sec Start 341: plm-bsp-mi-k-check 463/571 Test #335: plm-bsp-mi-c-check .................... Passed 0.02 sec Start 344: plm-bsp-gm-k-check 464/571 Test #338: plm-bsp-mi-c-2-check .................. Passed 0.02 sec Start 346: plm-bsp-sm-multi-a-stats 465/571 Test #196: plm-convert-dicom-e ................... Passed 0.19 sec Start 349: plm-bsp-openmp-check 466/571 Test #341: plm-bsp-mi-k-check .................... Passed 0.02 sec Start 351: plm-bsp-resume-stats 467/571 Test #344: plm-bsp-gm-k-check .................... Passed 0.01 sec Start 353: plm-bsp-logfile-check 468/571 Test #349: plm-bsp-openmp-check .................. Passed 0.02 sec Start 356: plm-bsp-ushort-check 469/571 Test #353: plm-bsp-logfile-check ................. Passed 0.01 sec Start 359: plm-bsp-double-check 470/571 Test #356: plm-bsp-ushort-check .................. Passed 0.02 sec Start 360: plm-bsp-itk-output 471/571 Test #359: plm-bsp-double-check .................. Passed 0.02 sec Start 363: plm-bsp-char-output-check 472/571 Test #277: plm-usage ............................. Passed 0.14 sec Start 367: plm-bsp-regularize-none-check 473/571 Test #363: plm-bsp-char-output-check ............. Passed 0.02 sec Start 370: plm-bsp-regularize-analytic-check 474/571 Test #367: plm-bsp-regularize-none-check ......... Passed 0.01 sec Start 373: plm-bsp-regularize-numeric-check 475/571 Test #370: plm-bsp-regularize-analytic-check ..... Passed 0.02 sec Start 374: plm-bsp-landmark-a 476/571 Test #373: plm-bsp-regularize-numeric-check ...... Passed 0.03 sec Start 377: plm-bsp-landmark-b-check 477/571 Test #377: plm-bsp-landmark-b-check .............. Passed 0.02 sec Start 380: plm-bsp-landmark-c-check 478/571 Test #380: plm-bsp-landmark-c-check .............. Passed 0.02 sec Start 383: plm-bsp-landmark-d-check 479/571 Test #245: plm-dmap-c ............................ Passed 0.27 sec Start 386: plm-bsp-landmark-e-check 480/571 Test #243: plm-dmap-a ............................ Passed 0.27 sec Start 389: plm-bsp-dcos-a-check 481/571 Test #383: plm-bsp-landmark-d-check .............. Passed 0.01 sec Start 392: plm-bsp-dcos-b-check 482/571 Test #386: plm-bsp-landmark-e-check .............. Passed 0.02 sec Start 395: plm-bsp-dcos-c-check 483/571 Test #328: plm-bsp-mse-p-stats ................... Passed 0.19 sec Start 398: plm-bsp-dcos-d-check 484/571 Test #326: plm-bsp-mse-o-stats ................... Passed 0.19 sec Start 401: plm-bsp-dcos-e-check 485/571 Test #389: plm-bsp-dcos-a-check .................. Passed 0.02 sec Start 404: plm-bsp-dcos-f-check 486/571 Test #392: plm-bsp-dcos-b-check .................. Passed 0.02 sec Start 407: plm-reg-multi-a-check 487/571 Test #395: plm-bsp-dcos-c-check .................. Passed 0.01 sec Start 410: plm-reg-multi-b-check 488/571 Test #398: plm-bsp-dcos-d-check .................. Passed 0.01 sec Start 413: plm-reg-dv-itk-translation-check 489/571 Test #332: plm-bsp-mse-r-stats ................... Passed 0.20 sec Start 414: plm-reg-roi-a 490/571 Test #401: plm-bsp-dcos-e-check .................. Passed 0.02 sec Start 415: plm-reg-roi-b 491/571 Test #346: plm-bsp-sm-multi-a-stats .............. Passed 0.18 sec Start 416: plm-reg-roi-c 492/571 Test #404: plm-bsp-dcos-f-check .................. Passed 0.02 sec Start 417: plm-reg-roi-d 493/571 Test #407: plm-reg-multi-a-check ................. Passed 0.02 sec Start 418: plm-reg-roi-e 494/571 Test #330: plm-bsp-mse-q-stats ................... Passed 0.21 sec Start 419: plm-reg-stiffness-a 495/571 Test #351: plm-bsp-resume-stats .................. Passed 0.19 sec Start 422: plm-reg-process-a-check 496/571 Test #410: plm-reg-multi-b-check ................. Passed 0.03 sec Start 425: plm-reg-trans-a-check 497/571 Test #413: plm-reg-dv-itk-translation-check ...... Passed 0.03 sec Start 428: plm-reg-trans-b-check 498/571 Test #422: plm-reg-process-a-check ............... Passed 0.01 sec Start 431: plm-reg-trans-mi-a-check 499/571 Test #204: plm-convert-dicom-donut-c ............. Passed 0.39 sec Start 434: plm-reg-autores-a-check 500/571 Test #425: plm-reg-trans-a-check ................. Passed 0.02 sec Start 437: plm-reg-autores-b-check 501/571 Test #428: plm-reg-trans-b-check ................. Passed 0.02 sec Start 438: plm-reg-point-dmap-a 502/571 Test #431: plm-reg-trans-mi-a-check .............. Passed 0.02 sec Start 441: plm-compose-a-warp 503/571 Test #434: plm-reg-autores-a-check ............... Passed 0.02 sec Start 443: plm-compose-a-check 504/571 Test #437: plm-reg-autores-b-check ............... Passed 0.02 sec Start 445: plm-compose-b-warp 505/571 Test #443: plm-compose-a-check ................... Passed 0.01 sec Start 447: plm-compose-b-check 506/571 Test #447: plm-compose-b-check ................... Passed 0.02 sec Start 449: plm-compose-c-warp 507/571 Test #360: plm-bsp-itk-output .................... Passed 0.25 sec Start 451: plm-compose-c-check 508/571 Test #451: plm-compose-c-check ................... Passed 0.01 sec Start 454: plm-resample-a-check 509/571 Test #454: plm-resample-a-check .................. Passed 0.01 sec Start 457: plm-resample-b-check 510/571 Test #457: plm-resample-b-check .................. Passed 0.02 sec Start 460: plm-resample-c-check 511/571 Test #460: plm-resample-c-check .................. Passed 0.02 sec Start 463: plm-scale-a-check 512/571 Test #463: plm-scale-a-check ..................... Passed 0.01 sec Start 466: plm-scale-vf-a-check 513/571 Test #466: plm-scale-vf-a-check .................. Passed 0.02 sec Start 472: plm-thumbnail-a-check 514/571 Test #374: plm-bsp-landmark-a .................... Passed 0.31 sec Start 475: plm-thumbnail-b-check 515/571 Test #472: plm-thumbnail-a-check ................. Passed 0.01 sec Start 478: plm-thumbnail-c-check 516/571 Test #475: plm-thumbnail-b-check ................. Passed 0.01 sec Start 481: plm-intersect-check 517/571 Test #478: plm-thumbnail-c-check ................. Passed 0.02 sec Start 484: plm-union-check 518/571 Test #481: plm-intersect-check ................... Passed 0.02 sec Start 487: plm-threshold-a-check 519/571 Test #484: plm-union-check ....................... Passed 0.02 sec Start 490: plm-threshold-b-check 520/571 Test #487: plm-threshold-a-check ................. Passed 0.02 sec Start 493: plm-threshold-c-check 521/571 Test #490: plm-threshold-b-check ................. Passed 0.02 sec Start 494: plm-warp-pointset-a 522/571 Test #493: plm-threshold-c-check ................. Passed 0.03 sec Start 495: plm-warp-pointset-b 523/571 Test #445: plm-compose-b-warp .................... Passed 0.25 sec Start 496: plm-warp-pointset-c 524/571 Test #441: plm-compose-a-warp .................... Passed 0.29 sec Start 499: plm-warp-a-check 525/571 Test #449: plm-compose-c-warp .................... Passed 0.26 sec Start 502: plm-warp-b-check-1 526/571 Test #416: plm-reg-roi-c ......................... Passed 0.35 sec Start 504: plm-warp-b-check-2 527/571 Test #499: plm-warp-a-check ...................... Passed 0.03 sec Start 507: plm-warp-c-check 528/571 Test #502: plm-warp-b-check-1 .................... Passed 0.03 sec Start 510: plm-warp-d-check 529/571 Test #504: plm-warp-b-check-2 .................... Passed 0.04 sec Start 513: plm-warp-f-check-1 530/571 Test #507: plm-warp-c-check ...................... Passed 0.02 sec Start 516: plm-warp-g-check-1 531/571 Test #510: plm-warp-d-check ...................... Passed 0.03 sec Start 519: plm-warp-h-check-1 532/571 Test #513: plm-warp-f-check-1 .................... Passed 0.03 sec Start 522: plm-warp-i-check-1 533/571 Test #516: plm-warp-g-check-1 .................... Passed 0.04 sec Start 525: plm-xf-convert-c 534/571 Test #519: plm-warp-h-check-1 .................... Passed 0.03 sec Start 529: plm-xf-convert-d-warp-1-check 535/571 Test #522: plm-warp-i-check-1 .................... Passed 0.03 sec Start 532: plm-xf-convert-d-warp-2-check 536/571 Test #494: plm-warp-pointset-a ................... Passed 0.19 sec Start 533: plm-xf-convert-e 537/571 Test #496: plm-warp-pointset-c ................... Passed 0.17 sec Start 534: plm-xf-convert-f 538/571 Test #532: plm-xf-convert-d-warp-2-check ......... Passed 0.04 sec Start 535: plm-xf-convert-g 539/571 Test #529: plm-xf-convert-d-warp-1-check ......... Passed 0.05 sec Start 538: plm-xf-convert-h-check 540/571 Test #495: plm-warp-pointset-b ................... Passed 0.22 sec Start 541: xf-invert-vf-zero-1-check 541/571 Test #538: plm-xf-convert-h-check ................ Passed 0.04 sec Start 544: xf-invert-vf-trans-1-check 542/571 Test #541: xf-invert-vf-zero-1-check ............. Passed 0.04 sec Start 546: xf-invert-vrs-a-check 543/571 Test #546: xf-invert-vrs-a-check ................. Passed 0.02 sec Start 548: xf-invert-vrs-b-check 544/571 Test #544: xf-invert-vf-trans-1-check ............ Passed 0.05 sec Start 551: proton-dose-1-check 545/571 Test #548: xf-invert-vrs-b-check ................. Passed 0.02 sec Start 554: proton-dose-4a-check 546/571 Test #415: plm-reg-roi-b ......................... Passed 0.61 sec Start 557: proton-dose-4d-check 547/571 Test #551: proton-dose-1-check ................... Passed 0.04 sec Start 560: proton-dose-5a-check 548/571 Test #525: plm-xf-convert-c ...................... Passed 0.20 sec Start 566: proton-dose-6a-check 549/571 Test #554: proton-dose-4a-check .................. Passed 0.04 sec 550/571 Test #557: proton-dose-4d-check .................. Passed 0.03 sec 551/571 Test #560: proton-dose-5a-check .................. Passed 0.03 sec 552/571 Test #566: proton-dose-6a-check .................. Passed 0.02 sec 553/571 Test #438: plm-reg-point-dmap-a .................. Passed 0.63 sec 554/571 Test #414: plm-reg-roi-a ......................... Passed 0.68 sec 555/571 Test #417: plm-reg-roi-d ......................... Passed 0.74 sec 556/571 Test #535: plm-xf-convert-g ...................... Passed 0.27 sec 557/571 Test #533: plm-xf-convert-e ...................... Passed 0.29 sec 558/571 Test #534: plm-xf-convert-f ...................... Passed 0.35 sec 559/571 Test #419: plm-reg-stiffness-a ................... Passed 0.86 sec 560/571 Test #561: proton-dose-5d ........................ Passed 5.73 sec Start 562: proton-dose-5d-stats Start 567: proton-dose-8d 561/571 Test #418: plm-reg-roi-e ......................... Passed 0.95 sec 562/571 Test #562: proton-dose-5d-stats .................. Passed 0.14 sec Start 563: proton-dose-5d-check 563/571 Test #563: proton-dose-5d-check .................. Passed 0.01 sec 564/571 Test #567: proton-dose-8d ........................ Passed 0.27 sec Start 568: proton-dose-8d-stats 565/571 Test #568: proton-dose-8d-stats .................. Passed 0.12 sec 566/571 Test #569: wed-a ................................. Passed 3.07 sec Start 570: wed-b Start 571: wed-c 567/571 Test #571: wed-c ................................. Passed 0.78 sec 568/571 Test #570: wed-b ................................. Passed 1.77 sec 569/571 Test #467: plm-sift-a ............................ Passed 16.22 sec Start 468: plm-sift-a-check-1 Start 469: plm-sift-a-check-2 570/571 Test #468: plm-sift-a-check-1 .................... Passed 0.01 sec 571/571 Test #469: plm-sift-a-check-2 .................... Passed 0.01 sec 100% tests passed, 0 tests failed out of 571 Total Test time (real) = 24.46 sec make[2]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[1]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/plastimatch-1.9.3+dfsg.1' dh_auto_install cd obj-i686-linux-gnu && make -j15 install DESTDIR=/build/plastimatch-1.9.3\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/plastimatch-1.9.3+dfsg.1 -B/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/CMakeFiles /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake --color= make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/devillard /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/inih-r29 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29 /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake --color= make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/specfun /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/libs/nkidecompress /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/inih-r29/CMakeFiles/inih.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/devillard/CMakeFiles/devillard.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/specfun/CMakeFiles/specfun.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/nkidecompress/CMakeFiles/nkidecompress.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/clp/CMakeFiles/plmclp.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/sys/CMakeFiles/plmsys.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 0%] Built target lbfgs [ 1%] Built target inih [ 1%] Built target devillard [ 1%] Built target specfun [ 1%] Built target nkidecompress [ 1%] Built target plmclp [ 4%] Built target plmsys make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/base /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/base/CMakeFiles/plmbase.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/base/CMakeFiles/plmbase.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 40%] Built target plmbase make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/util /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/util/CMakeFiles/plmutil.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/util/CMakeFiles/plmutil.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 51%] Built target plmutil make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/depend make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/depend make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build [ 53%] Built target plmreconstruct make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/dose/CMakeFiles/plmdose.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/register /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= [ 58%] Built target plmdose make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/register/CMakeFiles/plmregister.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 72%] Built target plmregister make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/segment/CMakeFiles/plmsegment.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/segment/CMakeFiles/plmsegment.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 77%] Built target plmsegment make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/wed.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/demons.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/check_grad.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/sobp.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [ 78%] Built target dlib_train [ 79%] Built target landmark_diff [ 79%] Built target dicom_uid [ 80%] Built target wed [ 80%] Built target shuffle_mha [ 81%] Built target dicom_info [ 82%] Built target compute_distance [ 83%] Built target demons [ 83%] Built target hnd_to_pfm [ 84%] Built target xvi_archive [ 85%] Built target check_grad [ 85%] Built target bragg_curve [ 86%] Built target sobp [ 87%] Built target merge_vfs make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' cd /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.9.3+dfsg.1 /build/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build make[4]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/cli/CMakeFiles/plastimatch.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' [100%] Built target plastimatch make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RELEASE" -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/README.TXT -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/COPYRIGHT.TXT -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libinih.a -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so.1.9 -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmbase_config.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/beam_geometry.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_bbox.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_header_compare.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so.1.9 -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmsys_config.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload_legacy.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so.1.9 -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_adjust.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_adjust.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/bin/plastimatch -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so.1.9 -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so.1.9 -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so.1.9 -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so.1.9 -- Installing: /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so make[2]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1/obj-i686-linux-gnu' rm -rfv /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/*.a removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libinih.a' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a' rm -rfv /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake' removed directory '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch' removed directory '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake' rm -rfv /build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmsys_config.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmbase_config.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_adjust.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_header_compare.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/beam_geometry.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload_legacy.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_bbox.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_adjust.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h' removed '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h' removed directory '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch' removed directory '/build/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include' make[1]: Leaving directory '/build/plastimatch-1.9.3+dfsg.1' dh_installdocs dh_installchangelogs dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'plastimatch' in '../plastimatch_1.9.3+dfsg.1-1_i386.deb'. dpkg-deb: building package 'plastimatch-dbgsym' in '../plastimatch-dbgsym_1.9.3+dfsg.1-1_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../plastimatch_1.9.3+dfsg.1-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: user script /srv/workspace/pbuilder/20695/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/20695/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/20695 and its subdirectories I: Current time: Wed Sep 7 03:05:56 +14 2022 I: pbuilder-time-stamp: 1662469556