I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 18 10:50:55 +14 2022 I: pbuilder-time-stamp: 1655499055 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [toil_5.2.0-5.dsc] I: copying [./toil_5.2.0.orig.tar.gz] I: copying [./toil_5.2.0-5.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig._HRTHftn/trustedkeys.kbx': General error gpgv: Signature made Thu Feb 11 00:48:58 2021 +14 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./toil_5.2.0-5.dsc dpkg-source: info: extracting toil in toil-5.2.0 dpkg-source: info: unpacking toil_5.2.0.orig.tar.gz dpkg-source: info: unpacking toil_5.2.0-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying version.patch dpkg-source: info: applying setting_version.patch dpkg-source: info: applying no_galaxy_lib dpkg-source: info: applying debianize_docs dpkg-source: info: applying soften-mesos-deps dpkg-source: info: applying soften-pydocker-dep dpkg-source: info: applying python3 dpkg-source: info: applying proxy dpkg-source: info: applying ship_tests dpkg-source: info: applying test_with_less_memory I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/31046/tmp/hooks/D01_modify_environment starting debug: Running on ionos16-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/31046/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/31046/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=18' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=608cf4ecbe5344779631ee68e73b722b LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=31046 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.2mlf1s5524/pbuilderrc_wFt5 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.2mlf1s5524/b2 --logfile b2/build.log --extrapackages usrmerge toil_5.2.0-5.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 4.19.0-16-amd64 #1 SMP Debian 4.19.181-1 (2021-03-19) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Feb 25 2021 bash -rwxr-xr-x 3 root root 38280 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 23 2020 cat -rwxr-xr-x 1 root root 71624 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 23 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 23 2020 chown -rwxr-xr-x 1 root root 157960 Sep 23 2020 cp -rwxr-xr-x 1 root root 128724 Dec 11 2020 dash -rwxr-xr-x 1 root root 124904 Sep 23 2020 date -rwxr-xr-x 1 root root 92172 Sep 23 2020 dd -rwxr-xr-x 1 root root 100752 Sep 23 2020 df -rwxr-xr-x 1 root root 153964 Sep 23 2020 dir -rwxr-xr-x 1 root root 83644 Feb 8 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 8 2021 findmnt -rwsr-xr-x 1 root root 30112 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 210488 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe -rwxr-xr-x 1 root root 100952 Mar 3 2021 gzip -rwxr-xr-x 1 root root 21916 Nov 8 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 23 2020 ln -rwxr-xr-x 1 root root 55572 Feb 8 2020 login -rwxr-xr-x 1 root root 153964 Sep 23 2020 ls -rwxr-xr-x 1 root root 153124 Feb 8 2021 lsblk -rwxr-xr-x 1 root root 96328 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 23 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 8 2021 more -rwsr-xr-x 1 root root 50720 Feb 8 2021 mount -rwxr-xr-x 1 root root 13856 Feb 8 2021 mountpoint -rwxr-xr-x 1 root root 157996 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Feb 25 2021 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 23 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 23 2020 rm -rwxr-xr-x 1 root root 46984 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Jun 18 10:51 sh -> bash lrwxrwxrwx 1 root root 4 Jun 18 06:06 sh.distrib -> dash -rwxr-xr-x 1 root root 34696 Sep 23 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 23 2020 stty -rwsr-xr-x 1 root root 79396 Feb 8 2021 su -rwxr-xr-x 1 root root 34696 Sep 23 2020 sync -rwxr-xr-x 1 root root 602584 Feb 17 2021 tar -rwxr-xr-x 1 root root 13860 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 23 2020 touch -rwxr-xr-x 1 root root 34664 Sep 23 2020 true -rwxr-xr-x 1 root root 17768 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 8 2021 umount -rwxr-xr-x 1 root root 34664 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress -rwxr-xr-x 1 root root 153964 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 8 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew I: user script /srv/workspace/pbuilder/31046/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-docker, python3-dill, python3-future, cwltool (>= 3.0.20201203173111), python3-distutils, python3-enlighten, python3-wdlparse, python3-pytest, python3-mock, python3-boto3, python3-boto, python3-stubserver, rsync, python3-urllib3, python3-sphinx dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19674 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-docker; however: Package python3-docker is not installed. pbuilder-satisfydepends-dummy depends on python3-dill; however: Package python3-dill is not installed. pbuilder-satisfydepends-dummy depends on python3-future; however: Package python3-future is not installed. pbuilder-satisfydepends-dummy depends on cwltool (>= 3.0.20201203173111); however: Package cwltool is not installed. pbuilder-satisfydepends-dummy depends on python3-distutils; however: Package python3-distutils is not installed. pbuilder-satisfydepends-dummy depends on python3-enlighten; however: Package python3-enlighten is not installed. pbuilder-satisfydepends-dummy depends on python3-wdlparse; however: Package python3-wdlparse is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-mock; however: Package python3-mock is not installed. pbuilder-satisfydepends-dummy depends on python3-boto3; however: Package python3-boto3 is not installed. pbuilder-satisfydepends-dummy depends on python3-boto; however: Package python3-boto is not installed. pbuilder-satisfydepends-dummy depends on python3-stubserver; however: Package python3-stubserver is not installed. pbuilder-satisfydepends-dummy depends on rsync; however: Package rsync is not installed. pbuilder-satisfydepends-dummy depends on python3-urllib3; however: Package python3-urllib3 is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} cwltool{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-glyphicons-halflings{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgraph6{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgd3{a} libglib2.0-0{a} libgraphite2-3{a} libgts-0.7-5{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libice6{a} libicu67{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblab-gamut1{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmpdec3{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libpopt0{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsm6{a} libsub-override-perl{a} libthai-data{a} libthai0{a} libtiff5{a} libtool{a} libuchardet0{a} libwebp6{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxt6{a} m4{a} man-db{a} media-types{a} openssl{a} po-debconf{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-all{a} python3-antlr4{a} python3-arcp{a} python3-argcomplete{a} python3-attr{a} python3-babel{a} python3-blessed{a} python3-boto{a} python3-boto3{a} python3-botocore{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-coloredlogs{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-distutils{a} python3-docker{a} python3-docutils{a} python3-enlighten{a} python3-future{a} python3-humanfriendly{a} python3-idna{a} python3-imagesize{a} python3-importlib-metadata{a} python3-iniconfig{a} python3-isodate{a} python3-jinja2{a} python3-jmespath{a} python3-lib2to3{a} python3-lockfile{a} python3-lxml{a} python3-markupsafe{a} python3-minimal{a} python3-mistune{a} python3-mock{a} python3-more-itertools{a} python3-msgpack{a} python3-mypy-extensions{a} python3-networkx{a} python3-packaging{a} python3-pbr{a} python3-pkg-resources{a} python3-pluggy{a} python3-prov{a} python3-psutil{a} python3-py{a} python3-pydot{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-rdflib{a} python3-rdflib-jsonld{a} python3-requests{a} python3-roman{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-s3transfer{a} python3-schema-salad{a} python3-setuptools{a} python3-shellescape{a} python3-six{a} python3-snowballstemmer{a} python3-sphinx{a} python3-stubserver{a} python3-toml{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-wcwidth{a} python3-wdlparse{a} python3-websocket{a} python3-zipp{a} python3.9{a} python3.9-minimal{a} readline-common{a} rsync{a} sensible-utils{a} sgml-base{a} sphinx-common{a} ucf{a} x11-common{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation javascript-common libarchive-cpio-perl libglib2.0-data libgts-bin libltdl-dev libmail-sendmail-perl libpaper-utils lynx nodejs python3-bs4 python3-gdal python3-html5lib python3-matplotlib python3-numpy python3-pil python3-pygraphviz python3-scipy python3-sparqlwrapper python3-yaml shared-mime-info wget xdg-user-dirs 0 packages upgraded, 187 newly installed, 0 to remove and 0 not upgraded. Need to get 60.2 MB of archives. After unpacking 272 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 libpopt0 i386 1.18-2 [51.9 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 rsync i386 3.2.3-4 [344 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 sgml-base all 1.30 [15.1 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 openssl i386 1.1.1k-1 [860 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 ca-certificates all 20210119 [158 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 ucf all 3.0043 [74.0 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 python3-argcomplete all 1.8.1-1.5 [29.7 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 python3-humanfriendly all 9.1-1 [84.6 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 python3-coloredlogs all 7.3-2 [28.0 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 python3-mypy-extensions all 0.4.3-2 [5700 B] Get: 39 http://deb.debian.org/debian bullseye/main i386 python3-pkg-resources all 52.0.0-3 [189 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 python3-six all 1.15.0-2 [16.9 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 python3-dateutil all 2.8.1-5 [81.7 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-6 [8776 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.6 [727 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 libxslt1.1 i386 1.1.34-4 [251 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 python3-lxml i386 4.6.3-1 [1080 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 python3-decorator all 4.4.2-2 [15.8 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 python3-networkx all 2.5+ds-2 [900 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 python3-isodate all 0.6.0-2 [25.0 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 python3-pyparsing all 2.4.7-1 [109 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 python3-rdflib all 5.0.0-1.1 [196 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 python3-prov all 1.5.2-2 [94.5 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 python3-psutil i386 5.8.0-1 [185 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 libcdt5 i386 2.42.2-5 [62.6 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 libcgraph6 i386 2.42.2-5 [89.8 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 libpng16-16 i386 1.6.37-3 [303 kB] Get: 57 http://deb.debian.org/debian bullseye/main i386 libfreetype6 i386 2.10.4+dfsg-1 [429 kB] Get: 58 http://deb.debian.org/debian bullseye/main i386 fonts-dejavu-core all 2.37-2 [1069 kB] Get: 59 http://deb.debian.org/debian bullseye/main i386 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 60 http://deb.debian.org/debian bullseye/main i386 libfontconfig1 i386 2.13.1-4.2 [358 kB] Get: 61 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB] Get: 62 http://deb.debian.org/debian bullseye/main i386 libdeflate0 i386 1.7-1 [48.4 kB] Get: 63 http://deb.debian.org/debian bullseye/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 64 http://deb.debian.org/debian bullseye/main i386 libwebp6 i386 0.6.1-2+b1 [274 kB] Get: 65 http://deb.debian.org/debian bullseye/main i386 libtiff5 i386 4.2.0-1 [305 kB] Get: 66 http://deb.debian.org/debian bullseye/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB] Get: 67 http://deb.debian.org/debian bullseye/main i386 libmd0 i386 1.0.3-3 [28.9 kB] Get: 68 http://deb.debian.org/debian bullseye/main i386 libbsd0 i386 0.11.3-1 [111 kB] Get: 69 http://deb.debian.org/debian bullseye/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 70 http://deb.debian.org/debian bullseye/main i386 libxcb1 i386 1.14-3 [144 kB] Get: 71 http://deb.debian.org/debian bullseye/main i386 libx11-data all 2:1.7.0-2 [310 kB] Get: 72 http://deb.debian.org/debian bullseye/main i386 libx11-6 i386 2:1.7.0-2 [796 kB] Get: 73 http://deb.debian.org/debian bullseye/main i386 libxpm4 i386 1:3.5.12-1 [50.9 kB] Get: 74 http://deb.debian.org/debian bullseye/main i386 libgd3 i386 2.3.0-2 [142 kB] Get: 75 http://deb.debian.org/debian bullseye/main i386 libglib2.0-0 i386 2.66.8-1 [1437 kB] Get: 76 http://deb.debian.org/debian bullseye/main i386 libgts-0.7-5 i386 0.7.6+darcs121130-4+b1 [161 kB] Get: 77 http://deb.debian.org/debian bullseye/main i386 libpixman-1-0 i386 0.40.0-1 [545 kB] Get: 78 http://deb.debian.org/debian bullseye/main i386 libxcb-render0 i386 1.14-3 [112 kB] Get: 79 http://deb.debian.org/debian bullseye/main i386 libxcb-shm0 i386 1.14-3 [102 kB] Get: 80 http://deb.debian.org/debian bullseye/main i386 libxext6 i386 2:1.3.3-1.1 [55.2 kB] Get: 81 http://deb.debian.org/debian bullseye/main i386 libxrender1 i386 1:0.9.10-1 [34.1 kB] Get: 82 http://deb.debian.org/debian bullseye/main i386 libcairo2 i386 1.16.0-5 [746 kB] Get: 83 http://deb.debian.org/debian bullseye/main i386 libltdl7 i386 2.4.6-15 [392 kB] Get: 84 http://deb.debian.org/debian bullseye/main i386 fontconfig i386 2.13.1-4.2 [417 kB] Get: 85 http://deb.debian.org/debian bullseye/main i386 libfribidi0 i386 1.0.8-2 [65.4 kB] Get: 86 http://deb.debian.org/debian bullseye/main i386 libgraphite2-3 i386 1.3.14-1 [84.0 kB] Get: 87 http://deb.debian.org/debian bullseye/main i386 libharfbuzz0b i386 2.7.4-1 [1490 kB] Get: 88 http://deb.debian.org/debian bullseye/main i386 libthai-data all 0.1.28-3 [170 kB] Get: 89 http://deb.debian.org/debian bullseye/main i386 libdatrie1 i386 0.2.13-1 [44.5 kB] Get: 90 http://deb.debian.org/debian bullseye/main i386 libthai0 i386 0.1.28-3 [55.3 kB] Get: 91 http://deb.debian.org/debian bullseye/main i386 libpango-1.0-0 i386 1.46.2-3 [197 kB] Get: 92 http://deb.debian.org/debian bullseye/main i386 libpangoft2-1.0-0 i386 1.46.2-3 [65.1 kB] Get: 93 http://deb.debian.org/debian bullseye/main i386 libpangocairo-1.0-0 i386 1.46.2-3 [51.9 kB] Get: 94 http://deb.debian.org/debian bullseye/main i386 libpathplan4 i386 2.42.2-5 [64.5 kB] Get: 95 http://deb.debian.org/debian bullseye/main i386 libgvc6 i386 2.42.2-5 [728 kB] Get: 96 http://deb.debian.org/debian bullseye/main i386 libgvpr2 i386 2.42.2-5 [221 kB] Get: 97 http://deb.debian.org/debian bullseye/main i386 liblab-gamut1 i386 2.42.2-5 [221 kB] Get: 98 http://deb.debian.org/debian bullseye/main i386 x11-common all 1:7.7+22 [252 kB] Get: 99 http://deb.debian.org/debian bullseye/main i386 libice6 i386 2:1.0.10-1 [60.8 kB] Get: 100 http://deb.debian.org/debian bullseye/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB] Get: 101 http://deb.debian.org/debian bullseye/main i386 libxt6 i386 1:1.2.0-1 [195 kB] Get: 102 http://deb.debian.org/debian bullseye/main i386 libxmu6 i386 2:1.1.2-2+b3 [62.8 kB] Get: 103 http://deb.debian.org/debian bullseye/main i386 libxaw7 i386 2:1.0.13-1.1 [210 kB] Get: 104 http://deb.debian.org/debian bullseye/main i386 graphviz i386 2.42.2-5 [594 kB] Get: 105 http://deb.debian.org/debian bullseye/main i386 python3-pydot all 1.4.2-1 [32.7 kB] Get: 106 http://deb.debian.org/debian bullseye/main i386 python3-certifi all 2020.6.20-1 [151 kB] Get: 107 http://deb.debian.org/debian bullseye/main i386 python3-chardet all 4.0.0-1 [99.0 kB] Get: 108 http://deb.debian.org/debian bullseye/main i386 python3-idna all 2.10-1 [37.4 kB] Get: 109 http://deb.debian.org/debian bullseye/main i386 python3-urllib3 all 1.26.2-1 [113 kB] Get: 110 http://deb.debian.org/debian bullseye/main i386 python3-requests all 2.25.1+dfsg-2 [69.3 kB] Get: 111 http://deb.debian.org/debian bullseye/main i386 python3-ruamel.yaml.clib i386 0.2.2-1+b2 [122 kB] Get: 112 http://deb.debian.org/debian bullseye/main i386 python3-ruamel.yaml all 0.16.12-2 [110 kB] Get: 113 http://deb.debian.org/debian bullseye/main i386 python3-msgpack i386 1.0.0-6+b1 [71.7 kB] Get: 114 http://deb.debian.org/debian bullseye/main i386 python3-cachecontrol all 0.12.6-1 [16.4 kB] Get: 115 http://deb.debian.org/debian bullseye/main i386 python3-lockfile all 1:0.12.2-2.2 [17.3 kB] Get: 116 http://deb.debian.org/debian bullseye/main i386 python3-mistune all 0.8.4-4 [16.4 kB] Get: 117 http://deb.debian.org/debian bullseye/main i386 python3-rdflib-jsonld all 0.5.0-1 [13.5 kB] Get: 118 http://deb.debian.org/debian bullseye/main i386 python3-typing-extensions all 3.7.4.3-1 [29.8 kB] Get: 119 http://deb.debian.org/debian bullseye/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-2 [164 kB] Get: 120 http://deb.debian.org/debian bullseye/main i386 libjs-bootstrap all 3.4.1+dfsg-2 [173 kB] Get: 121 http://deb.debian.org/debian bullseye/main i386 python3-schema-salad all 7.0.20210124093443-1 [302 kB] Get: 122 http://deb.debian.org/debian bullseye/main i386 python3-shellescape all 3.4.1-4 [4884 B] Get: 123 http://deb.debian.org/debian bullseye/main i386 python3-arcp all 0.2.1-3 [13.5 kB] Get: 124 http://deb.debian.org/debian bullseye/main i386 cwltool all 3.0.20210124104916-3 [404 kB] Get: 125 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 126 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 127 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 128 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 129 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 130 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 131 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 132 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 133 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 134 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 135 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 136 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 137 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 138 http://deb.debian.org/debian bullseye/main i386 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 139 http://deb.debian.org/debian bullseye/main i386 python3-distutils all 3.9.2-1 [143 kB] Get: 140 http://deb.debian.org/debian bullseye/main i386 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 141 http://deb.debian.org/debian bullseye/main i386 xml-core all 0.18+nmu1 [23.8 kB] Get: 142 http://deb.debian.org/debian bullseye/main i386 docutils-common all 0.16+dfsg-4 [129 kB] Get: 143 http://deb.debian.org/debian bullseye/main i386 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 144 http://deb.debian.org/debian bullseye/main i386 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 145 http://deb.debian.org/debian bullseye/main i386 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 146 http://deb.debian.org/debian bullseye/main i386 python-babel-localedata all 2.8.0+dfsg.1-6 [4996 kB] Get: 147 http://deb.debian.org/debian bullseye/main i386 python3-alabaster all 0.7.8-1.1 [18.6 kB] Get: 148 http://deb.debian.org/debian bullseye/main i386 python3-all i386 3.9.2-3 [1060 B] Get: 149 http://deb.debian.org/debian bullseye/main i386 python3-antlr4 all 4.9.1-1 [137 kB] Get: 150 http://deb.debian.org/debian bullseye/main i386 python3-attr all 20.3.0-1 [52.9 kB] Get: 151 http://deb.debian.org/debian bullseye/main i386 python3-tz all 2021.1-1 [34.8 kB] Get: 152 http://deb.debian.org/debian bullseye/main i386 python3-babel all 2.8.0+dfsg.1-6 [100 kB] Get: 153 http://deb.debian.org/debian bullseye/main i386 python3-wcwidth all 0.1.9+dfsg1-2 [18.2 kB] Get: 154 http://deb.debian.org/debian bullseye/main i386 python3-blessed all 1.17.12-1 [50.7 kB] Get: 155 http://deb.debian.org/debian bullseye/main i386 python3-boto all 2.49.0-3 [735 kB] Get: 156 http://deb.debian.org/debian bullseye/main i386 python3-jmespath all 0.10.0-1 [21.7 kB] Get: 157 http://deb.debian.org/debian bullseye/main i386 python3-botocore all 1.20.0+repack-1 [3863 kB] Get: 158 http://deb.debian.org/debian bullseye/main i386 python3-s3transfer all 0.3.4-1 [48.0 kB] Get: 159 http://deb.debian.org/debian bullseye/main i386 python3-boto3 all 1.13.14-1 [81.5 kB] Get: 160 http://deb.debian.org/debian bullseye/main i386 python3-dill all 0.3.3-1 [57.3 kB] Get: 161 http://deb.debian.org/debian bullseye/main i386 python3-websocket all 0.57.0-1 [34.3 kB] Get: 162 http://deb.debian.org/debian bullseye/main i386 python3-docker all 4.1.0-1.2 [85.2 kB] Get: 163 http://deb.debian.org/debian bullseye/main i386 python3-roman all 2.0.0-5 [9064 B] Get: 164 http://deb.debian.org/debian bullseye/main i386 python3-docutils all 0.16+dfsg-4 [384 kB] Get: 165 http://deb.debian.org/debian bullseye/main i386 python3-enlighten i386 1.7.2-1 [34.5 kB] Get: 166 http://deb.debian.org/debian bullseye/main i386 python3-future all 0.18.2-5 [349 kB] Get: 167 http://deb.debian.org/debian bullseye/main i386 python3-imagesize all 1.2.0-2 [5824 B] Get: 168 http://deb.debian.org/debian bullseye/main i386 python3-more-itertools all 4.2.0-3 [42.7 kB] Get: 169 http://deb.debian.org/debian bullseye/main i386 python3-zipp all 1.0.0-3 [6060 B] Get: 170 http://deb.debian.org/debian bullseye/main i386 python3-importlib-metadata all 1.6.0-2 [10.3 kB] Get: 171 http://deb.debian.org/debian bullseye/main i386 python3-iniconfig all 1.1.1-1 [6308 B] Get: 172 http://deb.debian.org/debian bullseye/main i386 python3-markupsafe i386 1.1.1-1+b3 [15.3 kB] Get: 173 http://deb.debian.org/debian bullseye/main i386 python3-jinja2 all 2.11.3-1 [114 kB] Get: 174 http://deb.debian.org/debian bullseye/main i386 python3-setuptools all 52.0.0-3 [441 kB] Get: 175 http://deb.debian.org/debian bullseye/main i386 python3-pbr all 5.5.0-2 [60.4 kB] Get: 176 http://deb.debian.org/debian bullseye/main i386 python3-mock all 4.0.3-1 [34.6 kB] Get: 177 http://deb.debian.org/debian bullseye/main i386 python3-packaging all 20.9-2 [33.5 kB] Get: 178 http://deb.debian.org/debian bullseye/main i386 python3-pluggy all 0.13.0-6 [22.3 kB] Get: 179 http://deb.debian.org/debian bullseye/main i386 python3-py all 1.10.0-1 [94.2 kB] Get: 180 http://deb.debian.org/debian bullseye/main i386 python3-pygments all 2.7.1+dfsg-2 [656 kB] Get: 181 http://deb.debian.org/debian bullseye/main i386 python3-toml all 0.10.1-1 [15.9 kB] Get: 182 http://deb.debian.org/debian bullseye/main i386 python3-pytest all 6.0.2-2 [211 kB] Get: 183 http://deb.debian.org/debian bullseye/main i386 python3-snowballstemmer all 2.1.0-1 [58.7 kB] Get: 184 http://deb.debian.org/debian bullseye/main i386 sphinx-common all 3.4.3-2 [578 kB] Get: 185 http://deb.debian.org/debian bullseye/main i386 python3-sphinx all 3.4.3-2 [545 kB] Get: 186 http://deb.debian.org/debian bullseye/main i386 python3-stubserver all 1.1-2 [7436 B] Get: 187 http://deb.debian.org/debian bullseye/main i386 python3-wdlparse all 0.1.0-2 [66.0 kB] Fetched 60.2 MB in 2s (24.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19674 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../1-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_i386.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../3-libpipeline1_1.5.3-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_i386.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libpython3.9-minimal:i386. Preparing to unpack .../5-libpython3.9-minimal_3.9.2-1_i386.deb ... Unpacking libpython3.9-minimal:i386 (3.9.2-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../6-libexpat1_2.2.10-2_i386.deb ... Unpacking libexpat1:i386 (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../7-python3.9-minimal_3.9.2-1_i386.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:i386 (3.9.2-1) ... Setting up libexpat1:i386 (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20541 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_i386.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:i386. 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(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20962 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_i386.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package libpopt0:i386. Preparing to unpack .../001-libpopt0_1.18-2_i386.deb ... Unpacking libpopt0:i386 (1.18-2) ... Selecting previously unselected package rsync. Preparing to unpack .../002-rsync_3.2.3-4_i386.deb ... Unpacking rsync (3.2.3-4) ... 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Preparing to unpack .../170-python3-wdlparse_0.1.0-2_all.deb ... Unpacking python3-wdlparse (0.1.0-2) ... Setting up media-types (4.0.0) ... Setting up libpipeline1:i386 (1.5.3-1) ... Setting up libgraphite2-3:i386 (1.3.14-1) ... Setting up libpixman-1-0:i386 (0.40.0-1) ... Setting up libxau6:i386 (1:1.0.9-1) ... Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:i386 (67.1-6) ... Setting up libdatrie1:i386 (0.2.13-1) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:i386 (2.66.8-1) ... No schema files found: doing nothing. Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-2) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:i386 (1.0.9-2+b2) ... Setting up liblab-gamut1:i386 (2.42.2-5) ... Setting up x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libmagic1:i386 (1:5.39-3) ... Setting up libdeflate0:i386 (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libjbig0:i386 (2.1-3.1+b2) ... Setting up python-babel-localedata (2.8.0+dfsg.1-6) ... Setting up libgts-0.7-5:i386 (0.7.6+darcs121130-4+b1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libjpeg62-turbo:i386 (1:2.0.6-4) ... Setting up libx11-data (2:1.7.0-2) ... Setting up libpathplan4:i386 (2.42.2-5) ... Setting up libsigsegv2:i386 (2.13-1) ... Setting up libfribidi0:i386 (1.0.8-2) ... Setting up libpng16-16:i386 (1.6.37-3) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:i386 (0.6.1-2+b1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libltdl7:i386 (2.4.6-15) ... Setting up libmd0:i386 (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libmpdec3:i386 (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libthai-data (0.1.28-3) ... Setting up sgml-base (1.30) ... Setting up libcdt5:i386 (2.42.2-5) ... Setting up libcgraph6:i386 (2.42.2-5) ... Setting up libtiff5:i386 (4.2.0-1) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up openssl (1.1.1k-1) ... Setting up libbsd0:i386 (0.11.3-1) ... Setting up libelf1:i386 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:i386 (2.9.10+dfsg-6.6) ... Setting up libjs-bootstrap (3.4.1+dfsg-2) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libpopt0:i386 (1.18-2) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up libice6:i386 (2:1.0.10-1) ... Setting up libxdmcp6:i386 (1:1.1.2-3) ... Setting up libxcb1:i386 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:i386 (1.14-3) ... Setting up libreadline8:i386 (8.1-1) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:i386 (1.14-3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libthai0:i386 (0.1.28-3) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up libfreetype6:i386 (2.10.4+dfsg-1) ... Setting up ucf (3.0043) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up libgvpr2:i386 (2.42.2-5) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up xml-core (0.18+nmu1) ... Setting up libxslt1.1:i386 (1.1.34-4) ... Setting up libx11-6:i386 (2:1.7.0-2) ... Setting up libharfbuzz0b:i386 (2.7.4-1) ... Setting up libsm6:i386 (2:1.2.3-1) ... Setting up rsync (3.2.3-4) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libpython3.9-stdlib:i386 (3.9.2-1) ... Setting up libpython3-stdlib:i386 (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxpm4:i386 (1:3.5.12-1) ... Setting up libxrender1:i386 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:i386 (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up sphinx-common (3.4.3-2) ... Setting up libxt6:i386 (1:1.2.0-1) ... Setting up libfontconfig1:i386 (2.13.1-4.2) ... Setting up python3.9 (3.9.2-1) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libxmu6:i386 (2:1.1.2-2+b3) ... Setting up libpango-1.0-0:i386 (1.46.2-3) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up libxaw7:i386 (2:1.0.13-1.1) ... Setting up python3-markupsafe (1.1.1-1+b3) ... Setting up libcairo2:i386 (1.16.0-5) ... Setting up python3-psutil (5.8.0-1) ... Setting up python3-tz (2021.1-1) ... Setting up python3-stubserver (1.1-2) ... Setting up python3-six (1.15.0-2) ... Setting up python3-isodate (0.6.0-2) ... Setting up python3-roman (2.0.0-5) ... Setting up python3-decorator (4.4.2-2) ... Setting up python3-jinja2 (2.11.3-1) ... Setting up python3-wcwidth (0.1.9+dfsg1-2) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up python3-humanfriendly (9.1-1) ... Setting up python3-certifi (2020.6.20-1) ... Setting up python3-snowballstemmer (2.1.0-1) ... Setting up python3-jmespath (0.10.0-1) ... Setting up python3-dill (0.3.3-1) ... Setting up libgd3:i386 (2.3.0-2) ... Setting up python3-idna (2.10-1) ... Setting up python3-typing-extensions (3.7.4.3-1) ... Setting up python3-toml (0.10.1-1) ... Setting up python3-urllib3 (1.26.2-1) ... Setting up python3-lxml:i386 (4.6.3-1) ... Setting up python3-rdflib (5.0.0-1.1) ... Setting up python3-dateutil (2.8.1-5) ... Setting up python3-msgpack (1.0.0-6+b1) ... Setting up python3-shellescape (3.4.1-4) ... Setting up libpangoft2-1.0-0:i386 (1.46.2-3) ... Setting up python3-argcomplete (1.8.1-1.5) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-coloredlogs (7.3-2) ... Setting up python3-mistune (0.8.4-4) ... Setting up python3-websocket (0.57.0-1) ... update-alternatives: using /usr/bin/python3-wsdump to provide /usr/bin/wsdump (wsdump) in auto mode Setting up libpangocairo-1.0-0:i386 (1.46.2-3) ... Setting up python3-imagesize (1.2.0-2) ... Setting up python3-pkg-resources (52.0.0-3) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up python3-more-itertools (4.2.0-3) ... Setting up python3-arcp (0.2.1-3) ... Setting up python3-iniconfig (1.1.1-1) ... Setting up python3-antlr4 (4.9.1-1) ... Setting up python3-attr (20.3.0-1) ... Setting up python3-lockfile (1:0.12.2-2.2) ... Setting up python3-rdflib-jsonld (0.5.0-1) ... Setting up python3-setuptools (52.0.0-3) ... Setting up python3-py (1.10.0-1) ... Setting up python3-babel (2.8.0+dfsg.1-6) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-pbr (5.5.0-2) ... Setting up python3-alabaster (0.7.8-1.1) ... Setting up python3-mypy-extensions (0.4.3-2) ... Setting up python3-blessed (1.17.12-1) ... Setting up python3-ruamel.yaml.clib:i386 (0.2.2-1+b2) ... Setting up python3-all (3.9.2-3) ... Setting up python3-zipp (1.0.0-3) ... Setting up python3-networkx (2.5+ds-2) ... Setting up python3-prov (1.5.2-2) ... Setting up python3-mock (4.0.3-1) ... Setting up python3-enlighten (1.7.2-1) ... Setting up python3-pygments (2.7.1+dfsg-2) ... Setting up python3-packaging (20.9-2) ... Setting up python3-chardet (4.0.0-1) ... Setting up python3-requests (2.25.1+dfsg-2) ... Setting up libgvc6 (2.42.2-5) ... Setting up python3-ruamel.yaml (0.16.12-2) ... Setting up python3-cachecontrol (0.12.6-1) ... Setting up python3-future (0.18.2-5) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python3-wdlparse (0.1.0-2) ... Setting up python3-boto (2.49.0-3) ... Setting up graphviz (2.42.2-5) ... Setting up python3-importlib-metadata (1.6.0-2) ... Setting up python3-pydot (1.4.2-1) ... Setting up python3-docker (4.1.0-1.2) ... Setting up python3-schema-salad (7.0.20210124093443-1) ... Setting up cwltool (3.0.20210124104916-3) ... Setting up python3-botocore (1.20.0+repack-1) ... Setting up python3-pluggy (0.13.0-6) ... Setting up python3-pytest (6.0.2-2) ... Setting up python3-s3transfer (0.3.4-1) ... Setting up python3-boto3 (1.13.14-1) ... Processing triggers for libc-bin (2.31-11) ... Processing triggers for sgml-base (1.30) ... Setting up docutils-common (0.16+dfsg-4) ... Processing triggers for sgml-base (1.30) ... Setting up python3-docutils (0.16+dfsg-4) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python3-sphinx (3.4.3-2) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl The following NEW packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 59.4 kB of archives. After this operation, 156 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main i386 libnumber-compare-perl all 0.03-1.1 [6956 B] Get:2 http://deb.debian.org/debian bullseye/main i386 libtext-glob-perl all 0.11-1 [8888 B] Get:3 http://deb.debian.org/debian bullseye/main i386 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:4 http://deb.debian.org/debian bullseye/main i386 usrmerge all 24 [13.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 59.4 kB in 0s (4223 kB/s) Selecting previously unselected package libnumber-compare-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 32475 files and directories currently installed.) Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... Unpacking libnumber-compare-perl (0.03-1.1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package usrmerge. Preparing to unpack .../archives/usrmerge_24_all.deb ... Unpacking usrmerge (24) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libnumber-compare-perl (0.03-1.1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up usrmerge (24) ... The system has been successfully converted. Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. I: Building the package I: Running cd /build/toil-5.2.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package toil dpkg-buildpackage: info: source version 5.2.0-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 dpkg-source: info: using options from toil-5.2.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/toil-5.2.0' rm -rf .pybuild rm -rf docs/_build find . -name "*.pyc" -delete make[1]: Leaving directory '/build/toil-5.2.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config /build/toil-5.2.0/setup.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/toil-5.2.0' dh_auto_build I: pybuild base:232: /usr/bin/python3 setup.py build /build/toil-5.2.0/setup.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp running build running build_py creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/worker.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/resource.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/version.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/statsAndLogging.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/toilState.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/realtimeLogger.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/deferred.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/leader.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/job.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/serviceManager.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil copying src/toil/common.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/htcondor.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/singleMachine.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/parasol.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/registry.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/kubernetes.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/torque.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/abstractBatchSystem.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/lsfHelper.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/abstractGridEngineBatchSystem.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/options.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/slurm.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/gridengine.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems copying src/toil/batchSystems/lsf.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners copying src/toil/provisioners/clusterScaler.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners copying src/toil/provisioners/abstractProvisioner.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners copying src/toil/provisioners/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners copying src/toil/provisioners/gceProvisioner.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners copying src/toil/provisioners/node.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/generatedEC2Lists.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/expando.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/retry.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/context.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/exceptions.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/memoize.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/misc.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/resources.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/ec2nodes.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/threading.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/docker.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/bioio.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/ec2.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/compatibility.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/iterables.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/humanize.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/throttle.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib copying src/toil/lib/objects.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test copying src/toil/test/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl copying src/toil/wdl/wdl_analysis.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl copying src/toil/wdl/wdl_functions.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl copying src/toil/wdl/wdl_types.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl copying src/toil/wdl/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl copying src/toil/wdl/utils.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl copying src/toil/wdl/toilwdl.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl copying src/toil/wdl/wdl_synthesis.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilDebugFile.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilRsyncCluster.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilDestroyCluster.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilStats.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilSshCluster.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilKill.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilLaunchCluster.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilUpdateEC2Instances.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilClean.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilMain.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilStatus.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils copying src/toil/utils/toilDebugJob.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores copying src/toil/fileStores/nonCachingFileStore.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores copying src/toil/fileStores/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores copying src/toil/fileStores/abstractFileStore.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores copying src/toil/fileStores/cachingFileStore.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores copying src/toil/jobStores/abstractJobStore.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores copying src/toil/jobStores/googleJobStore.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores copying src/toil/jobStores/conftest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores copying src/toil/jobStores/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores copying src/toil/jobStores/utils.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores copying src/toil/jobStores/fileJobStore.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/cwl copying src/toil/cwl/cwltoil.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/cwl copying src/toil/cwl/conftest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/cwl copying src/toil/cwl/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/cwl creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/batchSystem.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/conftest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos copying src/toil/batchSystems/mesos/executor.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos/test copying src/toil/batchSystems/mesos/test/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos/test creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/aws copying src/toil/provisioners/aws/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/aws copying src/toil/provisioners/aws/awsProvisioner.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/aws creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption copying src/toil/lib/encryption/_dummy.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption copying src/toil/lib/encryption/_nacl.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption copying src/toil/lib/encryption/conftest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption copying src/toil/lib/encryption/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/batchSystems copying src/toil/test/batchSystems/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/batchSystems copying src/toil/test/batchSystems/parasolTestSupport.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/batchSystems copying src/toil/test/batchSystems/batchSystemTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/batchSystems creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos copying src/toil/test/mesos/stress.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos copying src/toil/test/mesos/MesosDataStructuresTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos copying src/toil/test/mesos/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos copying src/toil/test/mesos/helloWorld.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners copying src/toil/test/provisioners/restartScript.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners copying src/toil/test/provisioners/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners copying src/toil/test/provisioners/gceProvisionerTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners copying src/toil/test/provisioners/clusterScalerTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/lib copying src/toil/test/lib/dockerTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/lib copying src/toil/test/lib/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/lib creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/resumabilityTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/realtimeLoggerTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/jobDescriptionTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/systemTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/promisesTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/jobServiceTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/jobFileStoreTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/checkpointTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/workerTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/helloWorldTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/autoDeploymentTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/regularLogTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/fileStoreTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/resourceTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/deferredFunctionTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/jobEncapsulationTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/miscTests.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/userDefinedJobArgTypeTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/jobTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/restartDAGTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/dockerCheckTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/promisedRequirementTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/importExportFileTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/threadingTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/retainTempDirTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src copying src/toil/test/src/toilContextManagerTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl copying src/toil/test/wdl/builtinTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl copying src/toil/test/wdl/conftest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl copying src/toil/test/wdl/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl copying src/toil/test/wdl/toilwdlTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/utils copying src/toil/test/utils/utilsTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/utils copying src/toil/test/utils/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/utils copying src/toil/test/utils/toilDebugTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/utils creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort copying src/toil/test/sort/sort.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort copying src/toil/test/sort/sortTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort copying src/toil/test/sort/restart_sort.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort copying src/toil/test/sort/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/docs copying src/toil/test/docs/scriptsTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/docs copying src/toil/test/docs/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/docs creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/jobStores copying src/toil/test/jobStores/jobStoreTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/jobStores copying src/toil/test/jobStores/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/jobStores creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/cwlTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/conftest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/aws copying src/toil/test/provisioners/aws/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/aws copying src/toil/test/provisioners/aws/awsProvisionerTest.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/aws creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/versions copying src/toil/wdl/versions/draft2.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/versions copying src/toil/wdl/versions/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/versions creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/aws copying src/toil/jobStores/aws/__init__.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/aws copying src/toil/jobStores/aws/utils.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/aws copying src/toil/jobStores/aws/jobStore.py -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/aws copying src/toil/test/cwl/s3_secondary_file.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/revtool2.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/revsort2.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/revsort.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/sorttool.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/seqtk_seq.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/download.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/revtool.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl copying src/toil/test/cwl/alwaysfails.cwl -> /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl PYTHONPATH=/build/toil-5.2.0/src /usr/bin/make -C docs man make[2]: Entering directory '/build/toil-5.2.0/docs' sphinx-build -b man -d _build/doctrees . _build/man Running Sphinx v3.4.3 making output directory... done loading intersphinx inventory from https://docs.python.org/2/objects.inv... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://docs.python.org/2/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.python.org', port=443): Max retries exceeded with url: /2/objects.inv (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')) building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: [new config] 29 added, 0 changed, 0 removed reading sources... [ 3%] appendices/architecture reading sources... [ 6%] appendices/aws_min_permissions reading sources... [ 10%] appendices/deploy reading sources... [ 13%] appendices/environment_vars reading sources... [ 17%] contributing/contributing reading sources... [ 20%] developingWorkflows/developing reading sources... [ 24%] developingWorkflows/toilAPI reading sources... [ 27%] developingWorkflows/toilAPIBatchsystem reading sources... [ 31%] developingWorkflows/toilAPIExceptions reading sources... [ 34%] developingWorkflows/toilAPIFilestore reading sources... [ 37%] developingWorkflows/toilAPIJobFunctions reading sources... [ 41%] developingWorkflows/toilAPIJobstore reading sources... [ 44%] developingWorkflows/toilAPIMethods reading sources... [ 48%] developingWorkflows/toilAPIRunner reading sources... [ 51%] developingWorkflows/toilAPIService reading sources... [ 55%] gettingStarted/install reading sources... [ 58%] gettingStarted/quickStart reading sources... [ 62%] index reading sources... [ 65%] running/cliOptions reading sources... [ 68%] running/cloud/amazon reading sources... [ 72%] running/cloud/cloud reading sources... [ 75%] running/cloud/clusterUtils reading sources... [ 79%] running/cloud/gce reading sources... [ 82%] running/cloud/kubernetes reading sources... [ 86%] running/cwl reading sources... [ 89%] running/debugging reading sources... [ 93%] running/hpcEnvironments reading sources... [ 96%] running/introduction reading sources... [100%] running/wdl /build/toil-5.2.0/docs/appendices/environment_vars.rst:160: WARNING: Blank line required after table. /build/toil-5.2.0/src/toil/job.py:docstring of toil.job.Job.getRootJobs:2: WARNING: Field list ends without a blank line; unexpected unindent. looking for now-outdated files... none found pickling environment... done checking consistency... /build/toil-5.2.0/docs/gettingStarted/install.rst: WARNING: document isn't included in any toctree done writing... toil.1 { gettingStarted/quickStart running/introduction running/cliOptions running/debugging running/cloud/cloud running/cloud/kubernetes running/cloud/amazon running/cloud/gce running/cloud/clusterUtils running/hpcEnvironments running/cwl running/wdl developingWorkflows/developing developingWorkflows/toilAPI developingWorkflows/toilAPIJobstore developingWorkflows/toilAPIJobFunctions developingWorkflows/toilAPIMethods developingWorkflows/toilAPIRunner developingWorkflows/toilAPIFilestore developingWorkflows/toilAPIBatchsystem developingWorkflows/toilAPIService developingWorkflows/toilAPIExceptions contributing/contributing appendices/architecture appendices/aws_min_permissions appendices/deploy appendices/environment_vars } /build/toil-5.2.0/docs/gettingStarted/quickStart.rst:: WARNING: "table row spanning" not supported done build succeeded, 5 warnings. The manual pages are in _build/man. Build finished. The manual pages are in _build/man. make[2]: Leaving directory '/build/toil-5.2.0/docs' make[1]: Leaving directory '/build/toil-5.2.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/toil-5.2.0' PYBUILD_SYSTEM=custom \ PYBUILD_TEST_ARGS='HOME={home_dir} {interpreter} setup.py develop --user && PYTHONPATH={dir}/src:$PYTHONPATH PATH={home_dir}/.local/bin/:$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True {interpreter} -m pytest -vv -W ignore --ignore src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore src/toil/test/wdl/toilwdlTest.py --ignore src/toil/test/cwl/cwlTest.py -k "not test_bioconda and not test_run_conformance and not testImportFtpFile and not ToilWdlIntegrationTest and not SortTest and not testCwlexample" {dir}/src/toil/test' \ dh_auto_test I: pybuild base:232: HOME=/build/toil-5.2.0/.pybuild/cpython3_3.9_toil python3.9 setup.py develop --user && PYTHONPATH=/build/toil-5.2.0/src:$PYTHONPATH PATH=/build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin/:$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True python3.9 -m pytest -vv -W ignore --ignore src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore src/toil/test/wdl/toilwdlTest.py --ignore src/toil/test/cwl/cwlTest.py -k "not test_bioconda and not test_run_conformance and not testImportFtpFile and not ToilWdlIntegrationTest and not SortTest and not testCwlexample" /build/toil-5.2.0/src/toil/test /build/toil-5.2.0/setup.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp running develop running egg_info creating src/toil.egg-info writing src/toil.egg-info/PKG-INFO writing dependency_links to src/toil.egg-info/dependency_links.txt writing entry points to src/toil.egg-info/entry_points.txt writing requirements to src/toil.egg-info/requires.txt writing top-level names to src/toil.egg-info/top_level.txt writing manifest file 'src/toil.egg-info/SOURCES.txt' reading manifest file 'src/toil.egg-info/SOURCES.txt' writing manifest file 'src/toil.egg-info/SOURCES.txt' running build_ext Creating /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/lib/python3.9/site-packages/toil.egg-link (link to src) Adding toil 5.2.0 to easy-install.pth file Installing _toil_kubernetes_executor script to /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin Installing _toil_mesos_executor script to /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin Installing _toil_worker script to /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin Installing cwltoil script to /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin Installing toil script to /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin Installing toil-cwl-runner script to /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin Installing toil-wdl-runner script to /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/.local/bin Installed /build/toil-5.2.0/src Processing dependencies for toil==5.2.0 Searching for requests==2.25.1 Best match: requests 2.25.1 Adding requests 2.25.1 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for pytz==2021.1 Best match: pytz 2021.1 Adding pytz 2021.1 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for python-dateutil==2.8.1 Best match: python-dateutil 2.8.1 Adding python-dateutil 2.8.1 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for psutil==5.8.0 Best match: psutil 5.8.0 Adding psutil 5.8.0 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for enlighten==1.7.2 Best match: enlighten 1.7.2 Adding enlighten 1.7.2 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for docker==4.1.0 Best match: docker 4.1.0 Adding docker 4.1.0 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for dill==0.3.3 Best match: dill 0.3.3 Adding dill 0.3.3 to easy-install.pth file Using /usr/lib/python3/dist-packages Finished processing dependencies for toil==5.2.0 ============================= test session starts ============================== platform linux -- Python 3.9.2, pytest-6.0.2, py-1.10.0, pluggy-0.13.0 -- /usr/bin/python3.9 cachedir: .pytest_cache rootdir: /build/toil-5.2.0, configfile: setup.cfg collecting ... /usr/lib/python3/dist-packages/wdlparse/__init__.py collected 569 items / 21 deselected / 548 selected src/toil/test/__init__.py::toil.test.make_tests PASSED [ 0%] src/toil/test/__init__.py::toil.test.timeLimit PASSED [ 0%] src/toil/test/batchSystems/batchSystemTest.py::KubernetesBatchSystemTest::testAvailableCores SKIPPED [ 0%] src/toil/test/batchSystems/batchSystemTest.py::KubernetesBatchSystemTest::testCheckResourceRequest SKIPPED [ 0%] src/toil/test/batchSystems/batchSystemTest.py::KubernetesBatchSystemTest::testRunJobs SKIPPED [ 0%] src/toil/test/batchSystems/batchSystemTest.py::KubernetesBatchSystemTest::testScalableBatchSystem SKIPPED [ 1%] 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src/toil/test/batchSystems/batchSystemTest.py::SingleMachineBatchSystemTest::testRunJobs SKIPPED [ 2%] src/toil/test/batchSystems/batchSystemTest.py::SingleMachineBatchSystemTest::testScalableBatchSystem SKIPPED [ 3%] src/toil/test/batchSystems/batchSystemTest.py::SingleMachineBatchSystemTest::testSetEnv SKIPPED [ 3%] src/toil/test/batchSystems/batchSystemTest.py::MaxCoresSingleMachineBatchSystemTest::test SKIPPED [ 3%] src/toil/test/batchSystems/batchSystemTest.py::MaxCoresSingleMachineBatchSystemTest::testServices SKIPPED [ 3%] src/toil/test/batchSystems/batchSystemTest.py::ParasolBatchSystemTest::testAvailableCores SKIPPED [ 3%] src/toil/test/batchSystems/batchSystemTest.py::ParasolBatchSystemTest::testBatchResourceLimits SKIPPED [ 4%] src/toil/test/batchSystems/batchSystemTest.py::ParasolBatchSystemTest::testCheckResourceRequest SKIPPED [ 4%] src/toil/test/batchSystems/batchSystemTest.py::ParasolBatchSystemTest::testRunJobs SKIPPED [ 4%] src/toil/test/batchSystems/batchSystemTest.py::ParasolBatchSystemTest::testScalableBatchSystem SKIPPED [ 4%] src/toil/test/batchSystems/batchSystemTest.py::ParasolBatchSystemTest::testSetEnv SKIPPED [ 4%] src/toil/test/batchSystems/batchSystemTest.py::GridEngineBatchSystemTest::testAvailableCores SKIPPED [ 4%] src/toil/test/batchSystems/batchSystemTest.py::GridEngineBatchSystemTest::testCheckResourceRequest SKIPPED [ 5%] src/toil/test/batchSystems/batchSystemTest.py::GridEngineBatchSystemTest::testRunJobs SKIPPED [ 5%] src/toil/test/batchSystems/batchSystemTest.py::GridEngineBatchSystemTest::testScalableBatchSystem SKIPPED [ 5%] src/toil/test/batchSystems/batchSystemTest.py::GridEngineBatchSystemTest::testSetEnv SKIPPED [ 5%] src/toil/test/batchSystems/batchSystemTest.py::SlurmBatchSystemTest::testAvailableCores SKIPPED [ 5%] src/toil/test/batchSystems/batchSystemTest.py::SlurmBatchSystemTest::testCheckResourceRequest SKIPPED [ 6%] src/toil/test/batchSystems/batchSystemTest.py::SlurmBatchSystemTest::testRunJobs SKIPPED [ 6%] src/toil/test/batchSystems/batchSystemTest.py::SlurmBatchSystemTest::testScalableBatchSystem SKIPPED [ 6%] src/toil/test/batchSystems/batchSystemTest.py::SlurmBatchSystemTest::testSetEnv SKIPPED [ 6%] src/toil/test/batchSystems/batchSystemTest.py::LSFBatchSystemTest::testAvailableCores SKIPPED [ 6%] src/toil/test/batchSystems/batchSystemTest.py::LSFBatchSystemTest::testCheckResourceRequest SKIPPED [ 6%] src/toil/test/batchSystems/batchSystemTest.py::LSFBatchSystemTest::testRunJobs SKIPPED [ 7%] src/toil/test/batchSystems/batchSystemTest.py::LSFBatchSystemTest::testScalableBatchSystem SKIPPED [ 7%] src/toil/test/batchSystems/batchSystemTest.py::LSFBatchSystemTest::testSetEnv SKIPPED [ 7%] src/toil/test/batchSystems/batchSystemTest.py::TorqueBatchSystemTest::testAvailableCores SKIPPED [ 7%] src/toil/test/batchSystems/batchSystemTest.py::TorqueBatchSystemTest::testCheckResourceRequest SKIPPED [ 7%] src/toil/test/batchSystems/batchSystemTest.py::TorqueBatchSystemTest::testRunJobs SKIPPED [ 8%] src/toil/test/batchSystems/batchSystemTest.py::TorqueBatchSystemTest::testScalableBatchSystem SKIPPED [ 8%] src/toil/test/batchSystems/batchSystemTest.py::TorqueBatchSystemTest::testSetEnv SKIPPED [ 8%] src/toil/test/batchSystems/batchSystemTest.py::HTCondorBatchSystemTest::testAvailableCores SKIPPED [ 8%] src/toil/test/batchSystems/batchSystemTest.py::HTCondorBatchSystemTest::testCheckResourceRequest SKIPPED [ 8%] src/toil/test/batchSystems/batchSystemTest.py::HTCondorBatchSystemTest::testRunJobs SKIPPED [ 8%] src/toil/test/batchSystems/batchSystemTest.py::HTCondorBatchSystemTest::testScalableBatchSystem SKIPPED [ 9%] src/toil/test/batchSystems/batchSystemTest.py::HTCondorBatchSystemTest::testSetEnv SKIPPED [ 9%] src/toil/test/batchSystems/batchSystemTest.py::SingleMachineBatchSystemJobTest::testConcurrencyWithDisk SKIPPED [ 9%] src/toil/test/batchSystems/batchSystemTest.py::SingleMachineBatchSystemJobTest::testJobConcurrency SKIPPED [ 9%] src/toil/test/batchSystems/batchSystemTest.py::SingleMachineBatchSystemJobTest::testNestedResourcesDoNotBlock SKIPPED [ 9%] src/toil/test/batchSystems/batchSystemTest.py::MesosBatchSystemJobTest::testJobConcurrency SKIPPED [ 10%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testArguments SKIPPED [ 10%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDiscoverfiles SKIPPED [ 10%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDocker SKIPPED [ 10%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testDynamic SKIPPED [ 10%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation SKIPPED [ 10%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testEncapsulation2 SKIPPED [ 11%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testHelloworld SKIPPED [ 11%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow SKIPPED [ 11%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testInvokeworkflow2 SKIPPED [ 11%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testJobFunctions SKIPPED [ 11%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging SKIPPED [ 12%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testManaging2 SKIPPED [ 12%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testMultiplejobs SKIPPED [ 12%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testMultiplejobs2 SKIPPED [ 12%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testMultiplejobs3 SKIPPED [ 12%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises SKIPPED [ 12%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testPromises2 SKIPPED [ 13%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testQuickstart SKIPPED [ 13%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testRequirements SKIPPED [ 13%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testServices SKIPPED [ 13%] src/toil/test/docs/scriptsTest.py::ToilDocumentationTest::testWdlexample SKIPPED [ 13%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testBatchCreate SKIPPED [ 14%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testChildLoadingEquality SKIPPED [ 14%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testCleanCache SKIPPED [ 14%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testConfigEquality SKIPPED [ 14%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionIdempotence SKIPPED [ 14%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testDestructionOfCorruptedJobStore SKIPPED [ 14%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testEmptyFileStoreIDIsReadable SKIPPED [ 15%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testFileDeletion SKIPPED [ 15%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testGrowingAndShrinkingJob SKIPPED [ 15%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testImportHttpFile SKIPPED [ 15%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testInitialState SKIPPED [ 15%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobCreation SKIPPED [ 16%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobDeletions SKIPPED [ 16%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testJobLoadEquality SKIPPED [ 16%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testLargeFile SKIPPED [ 16%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testMultipartUploads SKIPPED [ 16%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPartialReadFromStream SKIPPED [ 16%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPerJobFiles SKIPPED [ 17%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPersistantFilesToDelete SKIPPED [ 17%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testPreserveFileName SKIPPED [ 17%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testSharedFiles SKIPPED [ 17%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testStatsAndLogging SKIPPED [ 17%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testUpdateBehavior SKIPPED [ 18%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testWriteLogFiles SKIPPED [ 18%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::testZeroLengthFiles SKIPPED [ 18%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_jobstore_init_preserves_symlink_path PASSED [ 18%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- src/toil/test/__init__.py PASSED [ 18%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- src/toil/test/__init__.py PASSED [ 18%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- src/toil/test/__init__.py PASSED [ 19%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- src/toil/test/__init__.py PASSED [ 19%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py PASSED [ 19%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py PASSED [ 19%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- src/toil/test/__init__.py PASSED [ 19%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- src/toil/test/__init__.py PASSED [ 20%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- src/toil/test/__init__.py PASSED [ 20%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- src/toil/test/__init__.py PASSED [ 20%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py PASSED [ 20%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py PASSED [ 20%] src/toil/test/jobStores/jobStoreTest.py::FileJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- src/toil/test/__init__.py PASSED [ 20%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testBatchCreate SKIPPED [ 21%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testChildLoadingEquality SKIPPED [ 21%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testCleanCache SKIPPED [ 21%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testConfigEquality SKIPPED [ 21%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testDestructionIdempotence SKIPPED [ 21%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testDestructionOfCorruptedJobStore SKIPPED [ 22%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testEmptyFileStoreIDIsReadable SKIPPED [ 22%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testFileDeletion SKIPPED [ 22%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testGrowingAndShrinkingJob SKIPPED [ 22%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testImportHttpFile SKIPPED [ 22%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testInitialState SKIPPED [ 22%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobCreation SKIPPED [ 23%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobDeletions SKIPPED [ 23%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testJobLoadEquality SKIPPED [ 23%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testLargeFile SKIPPED [ 23%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testMultipartUploads SKIPPED [ 23%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPartialReadFromStream SKIPPED [ 24%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPerJobFiles SKIPPED [ 24%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testPersistantFilesToDelete SKIPPED [ 24%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testSharedFiles SKIPPED [ 24%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testStatsAndLogging SKIPPED [ 24%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testUpdateBehavior SKIPPED [ 25%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testWriteLogFiles SKIPPED [ 25%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::testZeroLengthFiles SKIPPED [ 25%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- src/toil/test/__init__.py SKIPPED [ 25%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- src/toil/test/__init__.py SKIPPED [ 25%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- src/toil/test/__init__.py SKIPPED [ 25%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- src/toil/test/__init__.py SKIPPED [ 26%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py SKIPPED [ 26%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py SKIPPED [ 26%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- src/toil/test/__init__.py SKIPPED [ 26%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- src/toil/test/__init__.py SKIPPED [ 26%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- src/toil/test/__init__.py SKIPPED [ 27%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- src/toil/test/__init__.py SKIPPED [ 27%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py SKIPPED [ 27%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py SKIPPED [ 27%] src/toil/test/jobStores/jobStoreTest.py::GoogleJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- src/toil/test/__init__.py SKIPPED [ 27%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testBatchCreate SKIPPED [ 27%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testChildLoadingEquality SKIPPED [ 28%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testCleanCache SKIPPED [ 28%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testConfigEquality SKIPPED [ 28%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testDestructionIdempotence SKIPPED [ 28%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testDestructionOfCorruptedJobStore SKIPPED [ 28%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testEmptyFileStoreIDIsReadable SKIPPED [ 29%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testFileDeletion SKIPPED [ 29%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testGrowingAndShrinkingJob SKIPPED [ 29%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testImportHttpFile SKIPPED [ 29%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testInitialState SKIPPED [ 29%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testInlinedFiles SKIPPED [ 29%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobCreation SKIPPED [ 30%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobDeletions SKIPPED [ 30%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testJobLoadEquality SKIPPED [ 30%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testLargeFile SKIPPED [ 30%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testMultipartUploads SKIPPED [ 30%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testOverlargeJob SKIPPED [ 31%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPartialReadFromStream SKIPPED [ 31%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPerJobFiles SKIPPED [ 31%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testPersistantFilesToDelete SKIPPED [ 31%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSDBDomainsDeletedOnFailedJobstoreBucketCreation SKIPPED [ 31%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testSharedFiles SKIPPED [ 31%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testStatsAndLogging SKIPPED [ 32%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testUpdateBehavior SKIPPED [ 32%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testWriteLogFiles SKIPPED [ 32%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::testZeroLengthFiles SKIPPED [ 32%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_one <- src/toil/test/__init__.py SKIPPED [ 32%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_onemib <- src/toil/test/__init__.py SKIPPED [ 33%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsize <- src/toil/test/__init__.py SKIPPED [ 33%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeminusone <- src/toil/test/__init__.py SKIPPED [ 33%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py SKIPPED [ 33%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py SKIPPED [ 33%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- src/toil/test/__init__.py SKIPPED [ 33%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- src/toil/test/__init__.py SKIPPED [ 34%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- src/toil/test/__init__.py SKIPPED [ 34%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- src/toil/test/__init__.py SKIPPED [ 34%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py SKIPPED [ 34%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py SKIPPED [ 34%] src/toil/test/jobStores/jobStoreTest.py::AWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- src/toil/test/__init__.py SKIPPED [ 35%] src/toil/test/jobStores/jobStoreTest.py::InvalidAWSJobStoreTest::testInvalidJobStoreName SKIPPED [ 35%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testBatchCreate SKIPPED [ 35%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testChildLoadingEquality SKIPPED [ 35%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testCleanCache SKIPPED [ 35%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testConfigEquality SKIPPED [ 35%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testDestructionIdempotence SKIPPED [ 36%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testDestructionOfCorruptedJobStore SKIPPED [ 36%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testEmptyFileStoreIDIsReadable SKIPPED [ 36%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testEncrypted SKIPPED [ 36%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testFileDeletion SKIPPED [ 36%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testGrowingAndShrinkingJob SKIPPED [ 37%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testImportHttpFile SKIPPED [ 37%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testInitialState SKIPPED [ 37%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testInlinedFiles SKIPPED [ 37%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testJobCreation SKIPPED [ 37%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testJobDeletions SKIPPED [ 37%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testJobLoadEquality SKIPPED [ 38%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testLargeFile SKIPPED [ 38%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testMultipartUploads SKIPPED [ 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src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py SKIPPED [ 41%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_activated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py SKIPPED [ 41%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_one <- src/toil/test/__init__.py SKIPPED [ 41%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_onemib <- src/toil/test/__init__.py SKIPPED [ 41%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsize <- src/toil/test/__init__.py SKIPPED [ 41%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeminusone <- src/toil/test/__init__.py SKIPPED [ 42%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_partsizeplusone <- src/toil/test/__init__.py SKIPPED [ 42%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportExportFile__moveExports_deactivated__otherCls_filejobstoretest__size_zero <- src/toil/test/__init__.py SKIPPED [ 42%] src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::test_testImportSharedFile__otherCls_filejobstoretest <- src/toil/test/__init__.py SKIPPED [ 42%] src/toil/test/lib/dockerTest.py::DockerTest::testDockerClean SKIPPED [ 42%] src/toil/test/lib/dockerTest.py::DockerTest::testDockerClean_CRx_FORGO SKIPPED [ 43%] 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[ 57%] src/toil/test/src/dockerCheckTest.py::DockerCheckTest::testToilQuayRepo SKIPPED [ 58%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testFileStoreLogging SKIPPED [ 58%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testFileStoreOperations SKIPPED [ 58%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testImportReadFileCompatibility PASSED [ 58%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testToilIsNotBroken SKIPPED [ 58%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteExportFileCompatibility PASSED [ 58%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions PASSED [ 59%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testAsyncWriteWithCaching SKIPPED [ 59%] 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src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteNonLocalFileToJobStore SKIPPED [ 63%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithFileJobStore::testWriteReadGlobalFilePermissions PASSED [ 63%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testFileStoreLogging SKIPPED [ 64%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testFileStoreOperations SKIPPED [ 64%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testImportReadFileCompatibility SKIPPED [ 64%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testToilIsNotBroken SKIPPED [ 64%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteExportFileCompatibility SKIPPED [ 64%] src/toil/test/src/fileStoreTest.py::NonCachingFileStoreTestWithAwsJobStore::testWriteReadGlobalFilePermissions SKIPPED [ 64%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testAsyncWriteWithCaching SKIPPED [ 65%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testCacheEvictionFailCase SKIPPED [ 65%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testCacheEvictionPartialEvict SKIPPED [ 65%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testCacheEvictionTotalEvict SKIPPED [ 65%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testControlledFailedWorkerRetry SKIPPED [ 65%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testDeleteLocalFile SKIPPED [ 66%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testExtremeCacheSetup SKIPPED [ 66%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testFileStoreExportFile SKIPPED [ 66%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testFileStoreLogging SKIPPED [ 66%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testFileStoreOperations SKIPPED [ 66%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testImportReadFileCompatibility SKIPPED [ 66%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testMultipleJobsReadSameCacheHitGlobalFile SKIPPED [ 67%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testMultipleJobsReadSameCacheMissGlobalFile SKIPPED [ 67%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testReadCachHitFileFromJobStore SKIPPED [ 67%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testReadCacheMissFileFromJobStoreWithCachingReadFile SKIPPED [ 67%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testReadCacheMissFileFromJobStoreWithoutCachingReadFile SKIPPED [ 67%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testRemoveLocalImmutablyReadFile SKIPPED [ 68%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testRemoveLocalMutablyReadFile SKIPPED [ 68%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testReturnFileSizes SKIPPED [ 68%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testReturnFileSizesWithBadWorker SKIPPED [ 68%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testSimultaneousReadsUncachedStream SKIPPED [ 68%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testToilIsNotBroken SKIPPED [ 68%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testWriteExportFileCompatibility SKIPPED [ 69%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithAwsJobStore::testWriteLocalFileToJobStore SKIPPED [ 69%] 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src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testAsyncWriteWithCaching SKIPPED [ 70%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testCacheEvictionFailCase SKIPPED [ 71%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testCacheEvictionPartialEvict SKIPPED [ 71%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testCacheEvictionTotalEvict SKIPPED [ 71%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testControlledFailedWorkerRetry SKIPPED [ 71%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testDeleteLocalFile SKIPPED [ 71%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testExtremeCacheSetup SKIPPED [ 72%] src/toil/test/src/fileStoreTest.py::CachingFileStoreTestWithGoogleJobStore::testFileStoreExportFile SKIPPED [ 72%] 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src/toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testConcurrencyDynamic SKIPPED [ 83%] src/toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testConcurrencyStatic SKIPPED [ 83%] src/toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testJobConcurrency SKIPPED [ 83%] src/toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromiseRequirementRaceStatic SKIPPED [ 83%] src/toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithJobStoreFileObjects SKIPPED [ 83%] src/toil/test/src/promisedRequirementTest.py::SingleMachinePromisedRequirementsTest::testPromisesWithNonCachingFileStore SKIPPED [ 83%] src/toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testConcurrencyDynamic SKIPPED [ 84%] src/toil/test/src/promisedRequirementTest.py::MesosPromisedRequirementsTest::testConcurrencyStatic SKIPPED [ 84%] 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src/toil/test/src/resumabilityTest.py::ResumabilityTest::test SKIPPED [ 88%] src/toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testAlways SKIPPED [ 88%] src/toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testNever SKIPPED [ 88%] src/toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithError SKIPPED [ 88%] src/toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnErrorWithNoError SKIPPED [ 89%] src/toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithError SKIPPED [ 89%] src/toil/test/src/retainTempDirTest.py::CleanWorkDirTest::testOnSuccessWithSuccess SKIPPED [ 89%] src/toil/test/src/systemTest.py::SystemTest::testAtomicityOfNonEmptyDirectoryRenames SKIPPED [ 89%] src/toil/test/src/threadingTest.py::ThreadingTest::testGlobalMutexOrdering SKIPPED [ 89%] src/toil/test/src/threadingTest.py::ThreadingTest::testLastProcessStanding SKIPPED [ 89%] src/toil/test/src/toilContextManagerTest.py::ToilContextManagerTest::testContextManger SKIPPED [ 90%] src/toil/test/src/toilContextManagerTest.py::ToilContextManagerTest::testExportAfterFailedExport SKIPPED [ 90%] src/toil/test/src/toilContextManagerTest.py::ToilContextManagerTest::testNoContextManger SKIPPED [ 90%] src/toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClass SKIPPED [ 90%] src/toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobClassFromMain SKIPPED [ 90%] src/toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunction SKIPPED [ 91%] src/toil/test/src/userDefinedJobArgTypeTest.py::UserDefinedJobArgTypeTest::testJobFunctionFromMain SKIPPED [ 91%] src/toil/test/src/workerTest.py::WorkerTests::testNextChainable SKIPPED [ 91%] src/toil/test/utils/toilDebugTest.py::ToilDebugFileTest::testFetchJobStoreFiles SKIPPED [ 91%] src/toil/test/utils/toilDebugTest.py::ToilDebugFileTest::testFetchJobStoreFilesWSymlinks SKIPPED [ 91%] src/toil/test/utils/toilDebugTest.py::ToilDebugFileTest::testJobStoreContents SKIPPED [ 91%] src/toil/test/utils/utilsTest.py::UtilsTest::testAWSProvisionerUtils SKIPPED [ 92%] src/toil/test/utils/utilsTest.py::UtilsTest::testGetPIDStatus SKIPPED [ 92%] src/toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedCWLWF SKIPPED [ 92%] src/toil/test/utils/utilsTest.py::UtilsTest::testGetStatusFailedToilWF SKIPPED [ 92%] src/toil/test/utils/utilsTest.py::UtilsTest::testGetStatusSuccessfulCWLWF SKIPPED [ 92%] src/toil/test/utils/utilsTest.py::UtilsTest::testMultipleJobsPerWorkerStats SKIPPED [ 93%] src/toil/test/utils/utilsTest.py::UtilsTest::testPrintJobLog PASSED [ 93%] src/toil/test/utils/utilsTest.py::UtilsTest::testRestartAttribute PASSED [ 93%] src/toil/test/utils/utilsTest.py::UtilsTest::testUnicodeSupport SKIPPED [ 93%] src/toil/test/utils/utilsTest.py::UtilsTest::testUtilsSort SKIPPED [ 93%] src/toil/test/utils/utilsTest.py::UtilsTest::testUtilsStatsSort SKIPPED [ 93%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_Ceil PASSED [ 94%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_Cross PASSED [ 94%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_Floor PASSED [ 94%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_Length PASSED [ 94%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadBoolean PASSED [ 94%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadFloat PASSED [ 95%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadInt PASSED [ 95%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadJson PASSED [ 95%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadLines PASSED [ 95%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadMap PASSED [ 95%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadString PASSED [ 95%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_ReadTsv PASSED [ 96%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_Sub PASSED [ 96%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_Transpose PASSED [ 96%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_WriteJson PASSED [ 96%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_WriteLines PASSED [ 96%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_WriteMap PASSED [ 97%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_WriteTsv PASSED [ 97%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryFunctionsTest::testFn_Zip PASSED [ 97%] src/toil/test/wdl/builtinTest.py::WdlLanguageSpecWorkflowsTest::test_type_pair PASSED [ 97%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_ceil PASSED [ 97%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_cross PASSED [ 97%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_floor PASSED [ 98%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_length PASSED [ 98%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_range PASSED [ 98%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_read PASSED [ 98%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_round PASSED [ 98%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_size PASSED [ 99%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_stdout PASSED [ 99%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_sub PASSED [ 99%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_transpose PASSED [ 99%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_write PASSED [ 99%] src/toil/test/wdl/builtinTest.py::WdlStandardLibraryWorkflowsTest::test_zip PASSED [100%] ========== 64 passed, 484 skipped, 21 deselected in 314.23s (0:05:14) ========== make[1]: Leaving directory '/build/toil-5.2.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild debian/rules override_dh_auto_install make[1]: Entering directory '/build/toil-5.2.0' dh_auto_install I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/toil-5.2.0/debian/toil /build/toil-5.2.0/setup.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp running install running build running build_py running install_lib creating /build/toil-5.2.0/debian/toil/usr creating /build/toil-5.2.0/debian/toil/usr/lib creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9 creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos/batchSystem.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos/test copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos/test/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos/test copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos/conftest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/mesos/executor.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/htcondor.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/singleMachine.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/parasol.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/registry.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/kubernetes.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/torque.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/abstractBatchSystem.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/lsfHelper.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/abstractGridEngineBatchSystem.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/options.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/slurm.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/gridengine.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/batchSystems/lsf.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/worker.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/clusterScaler.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/abstractProvisioner.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/gceProvisioner.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/node.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/aws/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/provisioners/aws/awsProvisioner.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/aws creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/generatedEC2Lists.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/expando.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/retry.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/context.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/exceptions.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/memoize.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/misc.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/resources.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/ec2nodes.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/threading.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/docker.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/bioio.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/ec2.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/compatibility.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/iterables.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/humanize.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption/_dummy.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption/_nacl.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption/conftest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/encryption/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/throttle.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/lib/objects.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/resource.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/version.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/statsAndLogging.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/toilState.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/realtimeLogger.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/batchSystems/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/batchSystems/parasolTestSupport.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/batchSystems copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/batchSystems/batchSystemTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/batchSystems creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos/stress.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos/MesosDataStructuresTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/mesos/helloWorld.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/restartScript.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/gceProvisionerTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/clusterScalerTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/aws/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/provisioners/aws/awsProvisionerTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/aws creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/lib/dockerTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/lib copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/lib/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/lib creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/resumabilityTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/realtimeLoggerTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/jobDescriptionTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/systemTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/promisesTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/jobServiceTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/jobFileStoreTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/checkpointTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/workerTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/helloWorldTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/autoDeploymentTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/regularLogTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/fileStoreTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/resourceTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/deferredFunctionTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/jobEncapsulationTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/miscTests.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/userDefinedJobArgTypeTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/jobTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/restartDAGTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/dockerCheckTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/promisedRequirementTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/importExportFileTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/threadingTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/retainTempDirTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/src/toilContextManagerTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl/builtinTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl/conftest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/wdl/toilwdlTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/utils/utilsTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/utils/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/utils/toilDebugTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/utils creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort/sort.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort/sortTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort/restart_sort.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/sort/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/docs copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/docs/scriptsTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/docs copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/docs/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/docs creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/jobStores/jobStoreTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/jobStores/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/jobStores creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/cwlTest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/s3_secondary_file.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/revtool2.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/revsort2.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/conftest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/revsort.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/sorttool.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/seqtk_seq.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/download.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/revtool.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/test/cwl/alwaysfails.cwl -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/deferred.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/leader.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/job.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/wdl_analysis.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/wdl_functions.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/wdl_types.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/utils.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/versions copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/versions/draft2.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/versions copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/versions/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/versions copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/toilwdl.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/wdl/wdl_synthesis.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilDebugFile.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilRsyncCluster.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilDestroyCluster.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilStats.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilSshCluster.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilKill.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilLaunchCluster.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilUpdateEC2Instances.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilClean.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilMain.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilStatus.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/utils/toilDebugJob.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/serviceManager.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores/nonCachingFileStore.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores/abstractFileStore.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/fileStores/cachingFileStore.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/abstractJobStore.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/googleJobStore.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/conftest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/utils.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/fileJobStore.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/aws/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/aws/utils.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/jobStores/aws/jobStore.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/aws copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/common.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil creating /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/cwl/cwltoil.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/cwl/conftest.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/cwl copying /build/toil-5.2.0/.pybuild/cpython3_3.9_toil/build/toil/cwl/__init__.py -> /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/cwl byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos/batchSystem.py to batchSystem.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos/test/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos/conftest.py to conftest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/mesos/executor.py to executor.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/htcondor.py to htcondor.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/singleMachine.py to singleMachine.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/parasol.py to parasol.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/registry.py to registry.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/kubernetes.py to kubernetes.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/torque.py to torque.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/abstractBatchSystem.py to abstractBatchSystem.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/lsfHelper.py to lsfHelper.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/abstractGridEngineBatchSystem.py to abstractGridEngineBatchSystem.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/options.py to options.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/slurm.py to slurm.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/gridengine.py to gridengine.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/batchSystems/lsf.py to lsf.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/worker.py to worker.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/clusterScaler.py to clusterScaler.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/abstractProvisioner.py to abstractProvisioner.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/gceProvisioner.py to gceProvisioner.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/node.py to node.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/aws/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/provisioners/aws/awsProvisioner.py to awsProvisioner.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/generatedEC2Lists.py to generatedEC2Lists.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/expando.py to expando.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/retry.py to retry.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/context.py to context.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/exceptions.py to exceptions.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/memoize.py to memoize.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/misc.py to misc.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/resources.py to resources.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/ec2nodes.py to ec2nodes.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/threading.py to threading.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/docker.py to docker.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/bioio.py to bioio.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/ec2.py to ec2.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/compatibility.py to compatibility.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/iterables.py to iterables.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/humanize.py to humanize.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption/_dummy.py to _dummy.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption/_nacl.py to _nacl.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption/conftest.py to conftest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/encryption/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/throttle.py to throttle.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/lib/objects.py to objects.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/resource.py to resource.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/version.py to version.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/statsAndLogging.py to statsAndLogging.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/toilState.py to toilState.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/realtimeLogger.py to realtimeLogger.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/batchSystems/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/batchSystems/parasolTestSupport.py to parasolTestSupport.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/batchSystems/batchSystemTest.py to batchSystemTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos/stress.py to stress.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos/MesosDataStructuresTest.py to MesosDataStructuresTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/mesos/helloWorld.py to helloWorld.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/restartScript.py to restartScript.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/gceProvisionerTest.py to gceProvisionerTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/clusterScalerTest.py to clusterScalerTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/aws/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/provisioners/aws/awsProvisionerTest.py to awsProvisionerTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/lib/dockerTest.py to dockerTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/lib/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/resumabilityTest.py to resumabilityTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/realtimeLoggerTest.py to realtimeLoggerTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/jobDescriptionTest.py to jobDescriptionTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/systemTest.py to systemTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/promisesTest.py to promisesTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/jobServiceTest.py to jobServiceTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/jobFileStoreTest.py to jobFileStoreTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/checkpointTest.py to checkpointTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/workerTest.py to workerTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/helloWorldTest.py to helloWorldTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/autoDeploymentTest.py to autoDeploymentTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/regularLogTest.py to regularLogTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/fileStoreTest.py to fileStoreTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/resourceTest.py to resourceTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/deferredFunctionTest.py to deferredFunctionTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/jobEncapsulationTest.py to jobEncapsulationTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/miscTests.py to miscTests.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/userDefinedJobArgTypeTest.py to userDefinedJobArgTypeTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/jobTest.py to jobTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/restartDAGTest.py to restartDAGTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/dockerCheckTest.py to dockerCheckTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/promisedRequirementTest.py to promisedRequirementTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/importExportFileTest.py to importExportFileTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/threadingTest.py to threadingTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/retainTempDirTest.py to retainTempDirTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/src/toilContextManagerTest.py to toilContextManagerTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl/builtinTest.py to builtinTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl/conftest.py to conftest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/wdl/toilwdlTest.py to toilwdlTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/utils/utilsTest.py to utilsTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/utils/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/utils/toilDebugTest.py to toilDebugTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort/sort.py to sort.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort/sortTest.py to sortTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort/restart_sort.py to restart_sort.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/sort/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/docs/scriptsTest.py to scriptsTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/docs/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/jobStores/jobStoreTest.py to jobStoreTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/jobStores/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl/cwlTest.py to cwlTest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl/conftest.py to conftest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/test/cwl/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/deferred.py to deferred.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/leader.py to leader.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/job.py to job.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/wdl_analysis.py to wdl_analysis.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/wdl_functions.py to wdl_functions.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/wdl_types.py to wdl_types.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/utils.py to utils.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/versions/draft2.py to draft2.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/versions/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/toilwdl.py to toilwdl.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/wdl/wdl_synthesis.py to wdl_synthesis.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilDebugFile.py to toilDebugFile.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilRsyncCluster.py to toilRsyncCluster.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilDestroyCluster.py to toilDestroyCluster.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilStats.py to toilStats.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilSshCluster.py to toilSshCluster.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilKill.py to toilKill.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilLaunchCluster.py to toilLaunchCluster.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilUpdateEC2Instances.py to toilUpdateEC2Instances.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilClean.py to toilClean.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilMain.py to toilMain.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilStatus.py to toilStatus.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/utils/toilDebugJob.py to toilDebugJob.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/serviceManager.py to serviceManager.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores/nonCachingFileStore.py to nonCachingFileStore.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores/abstractFileStore.py to abstractFileStore.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/fileStores/cachingFileStore.py to cachingFileStore.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/abstractJobStore.py to abstractJobStore.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/googleJobStore.py to googleJobStore.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/conftest.py to conftest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/utils.py to utils.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/fileJobStore.py to fileJobStore.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/aws/__init__.py to __init__.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/aws/utils.py to utils.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/jobStores/aws/jobStore.py to jobStore.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/common.py to common.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/cwl/cwltoil.py to cwltoil.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/cwl/conftest.py to conftest.cpython-39.pyc byte-compiling /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil/cwl/__init__.py to __init__.cpython-39.pyc running install_egg_info running egg_info writing src/toil.egg-info/PKG-INFO writing dependency_links to src/toil.egg-info/dependency_links.txt writing entry points to src/toil.egg-info/entry_points.txt writing requirements to src/toil.egg-info/requires.txt writing top-level names to src/toil.egg-info/top_level.txt reading manifest file 'src/toil.egg-info/SOURCES.txt' writing manifest file 'src/toil.egg-info/SOURCES.txt' Copying src/toil.egg-info to /build/toil-5.2.0/debian/toil/usr/lib/python3.9/dist-packages/toil-5.2.0.egg-info Skipping SOURCES.txt running install_scripts Installing _toil_kubernetes_executor script to /build/toil-5.2.0/debian/toil/usr/bin Installing _toil_mesos_executor script to /build/toil-5.2.0/debian/toil/usr/bin Installing _toil_worker script to /build/toil-5.2.0/debian/toil/usr/bin Installing cwltoil script to /build/toil-5.2.0/debian/toil/usr/bin Installing toil script to /build/toil-5.2.0/debian/toil/usr/bin Installing toil-cwl-runner script to /build/toil-5.2.0/debian/toil/usr/bin Installing toil-wdl-runner script to /build/toil-5.2.0/debian/toil/usr/bin find /build/toil-5.2.0/debian -name cwltoil -delete # remove the below once mesos is packaged and tested find /build/toil-5.2.0/debian -name _toil_mesos_executor -delete make[1]: Leaving directory '/build/toil-5.2.0' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'toil' in '../toil_5.2.0-5_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../toil_5.2.0-5_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from toil-5.2.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: user script /srv/workspace/pbuilder/31046/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/31046/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/31046 and its subdirectories I: Current time: Sat Jun 18 10:57:16 +14 2022 I: pbuilder-time-stamp: 1655499436