I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 21 12:09:14 +14 2025 I: pbuilder-time-stamp: 1750457354 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [apophenia_1.0+ds-8.1.dsc] I: copying [./apophenia_1.0+ds.orig.tar.gz] I: copying [./apophenia_1.0+ds-8.1.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Feb 28 01:14:12 2024 gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D gpgv: issuer "vorlon@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./apophenia_1.0+ds-8.1.dsc: no acceptable signature found dpkg-source: info: extracting apophenia in apophenia-1.0+ds dpkg-source: info: unpacking apophenia_1.0+ds.orig.tar.gz dpkg-source: info: unpacking apophenia_1.0+ds-8.1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying upstream-fix-implicit-model-ols_log_likelihood.patch dpkg-source: info: applying upstream-mysql-8.0.patch dpkg-source: info: applying upstream-bug-793998-tests_distribution_tests-2.patch dpkg-source: info: applying upstream-fix-typo.patch dpkg-source: info: applying upstream-enhancement-eg_test_updating.patch dpkg-source: info: applying upstream-correction-spelling-error-in-source.patch dpkg-source: info: applying debianization.patch dpkg-source: info: applying debianization-help2man.patch dpkg-source: info: applying debianization-documentation.patch dpkg-source: info: applying debianization-bug-597187_757967_841636-mysql_config.patch dpkg-source: info: applying debianization-adhoc.patch dpkg-source: info: applying debianization-bug-gcc9-XXX.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/32104/tmp/hooks/D01_modify_environment starting debug: Running on infom08-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jun 20 22:09 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/32104/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/32104/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=e634aedf815f4219ab37d742ae7711d5 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=32104 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ad4IWpiH/pbuilderrc_2MmN --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ad4IWpiH/b2 --logfile b2/build.log apophenia_1.0+ds-8.1.dsc' SUDO_GID=111 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' I: uname -a Linux i-capture-the-hostname 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 19 21:18 /bin -> usr/bin I: user script /srv/workspace/pbuilder/32104/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), autoconf-archive, gnulib, libtool, pkg-config, help2man, zlib1g-dev, default-libmysqlclient-dev, libsqlite3-dev, libgsl-dev, bc, sqlite3, graphviz, doxygen, texlive-latex-recommended, texlive-fonts-recommended, ghostscript, rdfind, symlinks dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on autoconf-archive; however: Package autoconf-archive is not installed. pbuilder-satisfydepends-dummy depends on gnulib; however: Package gnulib is not installed. pbuilder-satisfydepends-dummy depends on libtool; however: Package libtool is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on default-libmysqlclient-dev; however: Package default-libmysqlclient-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on bc; however: Package bc is not installed. pbuilder-satisfydepends-dummy depends on sqlite3; however: Package sqlite3 is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. pbuilder-satisfydepends-dummy depends on rdfind; however: Package rdfind is not installed. pbuilder-satisfydepends-dummy depends on symlinks; however: Package symlinks is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} autoconf-archive{a} automake{a} autopoint{a} autotools-dev{a} bc{a} bsdextrautils{a} debhelper{a} default-libmysqlclient-dev{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} gnulib{a} graphviz{a} groff-base{a} help2man{a} intltool-debian{a} libabsl20230802{a} libaom3{a} libarchive-zip-perl{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang-cpp16t64{a} libclang1-16t64{a} libcom-err2{a} libcups2t64{a} libdata-optlist-perl{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libglib2.0-0t64{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgsl-dev{a} libgsl27{a} libgslcblas0{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu72{a} libidn12{a} libijs-0.35{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblcms2-2{a} liblerc4{a} libllvm16t64{a} liblocale-gettext-perl{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmariadb-dev{a} libmariadb-dev-compat{a} libmariadb3{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-util-perl{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libpotrace0{a} libptexenc1{a} librav1e0{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsqlite3-dev{a} libssl-dev{a} libsub-exporter-perl{a} libsub-install-perl{a} libsub-override-perl{a} libsub-prototype-perl{a} libsynctex2{a} libteckit0{a} libtexlua53-5{a} libthai-data{a} libthai0{a} libtiff6{a} libtool{a} libuchardet0{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} m4{a} man-db{a} mariadb-common{a} mysql-common{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} poppler-data{a} rdfind{a} readline-common{a} sensible-utils{a} sqlite3{a} symlinks{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-recommended{a} ucf{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bison curl dbus dvisvgm fonts-droid-fallback fonts-liberation2 gperf krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libltdl-dev libmail-sendmail-perl libnet-dbus-perl libx11-protocol-perl lmodern lynx shared-mime-info tex-gyre texinfo tipa wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 179 newly installed, 0 to remove and 0 not upgraded. Need to get 256 MB of archives. After unpacking 803 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 autoconf-archive all 20220903-3 [775 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 liblocale-gettext-perl i386 1.07-7 [15.1 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 poppler-data all 0.4.12-1 [1601 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-4 [69.3 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3 [42.9 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-4 [1194 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.1-1 [98.5 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 man-db i386 2.12.1-1 [1421 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 autoconf all 2.71-3 [332 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 autopoint all 0.21-14 [496 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-4 [171 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 bc i386 1.07.1-4 [105 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-7 [517 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libparams-util-perl i386 1.102-3 [24.4 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libsub-install-perl all 0.929-1 [10.5 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libdata-optlist-perl all 0.114-1 [10.6 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libsub-exporter-perl all 0.990-1 [50.6 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libsub-prototype-perl i386 0.03-2+b2 [9756 B] Get: 32 http://deb.debian.org/debian unstable/main i386 libsub-override-perl all 0.11-1 [10.4 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 35 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 debhelper all 13.15.3 [901 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 mysql-common all 5.8+1.1.0 [6636 B] Get: 44 http://deb.debian.org/debian unstable/main i386 mariadb-common all 1:10.11.8-1 [26.4 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libmariadb3 i386 1:10.11.8-1 [176 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libssl-dev i386 3.2.1-3 [2744 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1 [915 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 libmariadb-dev i386 1:10.11.8-1 [267 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 libmariadb-dev-compat i386 1:10.11.8-1 [25.2 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 default-libmysqlclient-dev i386 1.1.0+b1 [3392 B] Get: 51 http://deb.debian.org/debian unstable/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20230828-1+b1 [97.8 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.8.12-3.1+b2 [7989 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 libllvm16t64 i386 1:16.0.6-27 [26.9 MB] Get: 55 http://deb.debian.org/debian unstable/main i386 libclang-cpp16t64 i386 1:16.0.6-27 [13.6 MB] Get: 56 http://deb.debian.org/debian unstable/main i386 libclang1-16t64 i386 1:16.0.6-27 [7735 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libfmt9 i386 9.1.0+ds1-2 [119 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 doxygen i386 1.9.8+ds-2+b1 [5106 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.43-5 [286 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.2+dfsg-1+b4 [449 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1 [23.1 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+23 [252 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+6 [95.2 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 70 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libgs-common all 10.03.0~dfsg-1 [148 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libgs10-common all 10.03.0~dfsg-1 [474 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libavahi-common-data i386 0.8-13+b2 [112 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libavahi-common3 i386 0.8-13+b2 [45.3 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libdbus-1-3 i386 1.14.10-4+b1 [217 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libavahi-client3 i386 0.8-13+b2 [49.3 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.20.1-6+b1 [36.1 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.1~rc2-1 [22.8 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.20.1-6+b1 [83.2 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 84 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.20.1-6+b1 [360 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.20.1-6+b1 [145 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libcups2t64 i386 2.4.7-1.2+b1 [264 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libidn12 i386 1.42-2 [81.3 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libijs-0.35 i386 0.35-15.1+b1 [15.7 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libjbig2dec0 i386 0.20-1+b2 [66.5 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.14-2+b1 [165 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.0-2+b3 [197 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libpaper1 i386 1.1.29+b1 [13.0 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.4.0-0.1 [113 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.4.0-0.1 [318 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.5.1+git230720-4 [338 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-1 [148 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.0.10-1+b1 [58.6 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.3-1+b1 [33.9 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2 [193 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libgs10 i386 10.03.0~dfsg-1 [2649 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 ghostscript i386 10.03.0~dfsg-1 [50.2 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 gnulib all 20240412~dfb7117+stable202401.20240408~aa0aa87-3 [76.6 MB] Get: 111 http://deb.debian.org/debian unstable/main i386 libcdt5 i386 2.42.2-9+b1 [40.3 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libcgraph6 i386 2.42.2-9+b1 [67.5 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libaom3 i386 3.8.2-2 [1910 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.4.1-1 [330 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libabsl20230802 i386 20230802.1-4 [521 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libgav1-1 i386 0.19.0-2+b1 [325 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 librav1e0 i386 0.7.1-2 [650 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libyuv0 i386 0.0.1888.20240509-4 [108 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libavif16 i386 1.0.4-3 [113 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.17.6-1+b2 [10.2 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b1 [195 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.17.6-1+b2 [13.7 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.17.6-1+b2 [299 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b1 [57.8 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 libgd3 i386 2.3.3-9+b3 [129 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.80.2-1 [1555 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2 [158 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-1 [115 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-1 [105 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.10-1.1+b1 [28.8 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.0-3+b1 [588 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.4.7-7+b1 [395 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.13-3+b1 [71.8 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 8.3.0-2+b1 [2234 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.52.2+ds-1 [226 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.52.2+ds-1 [51.2 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.52.2+ds-1 [35.9 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libpathplan4 i386 2.42.2-9+b1 [42.4 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libgvc6 i386 2.42.2-9+b1 [712 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libgvpr2 i386 2.42.2-9+b1 [198 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 liblab-gamut1 i386 2.42.2-9+b1 [198 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b2 [60.5 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.14-1+b2 [208 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 graphviz i386 2.42.2-9+b1 [576 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 help2man i386 1.49.3 [198 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 libgslcblas0 i386 2.7.1+dfsg-6+b1 [97.7 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 libgsl27 i386 2.7.1+dfsg-6+b1 [920 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 libgsl-dev i386 2.7.1+dfsg-6+b1 [1169 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2023.20230311.66589-9+b2 [157 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 1.1.29+b1 [9280 B] Get: 157 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-1+b2 [38.5 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b1 [24.2 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2023.20230311.66589-9+b2 [48.3 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libsqlite3-dev i386 3.45.3-1 [1173 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2023.20230311.66589-9+b2 [64.9 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.12+ds1-1 [284 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2023.20230311.66589-9+b2 [128 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.1-1 [81.0 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 libzzip-0-13t64 i386 0.13.72+dfsg.1-1.2+b1 [58.1 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-1+b2 [30.2 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-1+b2 [26.2 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 pkg-config i386 1.8.1-1+b2 [14.0 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 rdfind i386 1.6.0-1+b1 [47.8 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 sqlite3 i386 3.45.3-1 [391 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 symlinks i386 1.4-4 [11.4 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 tex-common all 6.18 [32.5 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2023.20230311.66589-9+b2 [8273 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 texlive-base all 2023.20240207-1 [22.0 MB] Get: 177 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2023.20240207-1 [4990 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2023.20240207-1 [1255 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2023.20240207-1 [8843 kB] Fetched 256 MB in 6s (43.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package autoconf-archive. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../000-autoconf-archive_20220903-3_all.deb ... Unpacking autoconf-archive (20220903-3) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../001-liblocale-gettext-perl_1.07-7_i386.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package poppler-data. Preparing to unpack .../002-poppler-data_0.4.12-1_all.deb ... Unpacking poppler-data (0.4.12-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../003-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.45-3_i386.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../006-libmagic1t64_1%3a5.45-3_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.45-3_i386.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../009-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../010-groff-base_1.23.0-4_i386.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../011-bsdextrautils_2.40.1-1_i386.deb ... Unpacking bsdextrautils (2.40.1-1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../012-libpipeline1_1.5.7-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../013-man-db_2.12.1-1_i386.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../015-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../016-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../017-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../018-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../019-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../020-libreadline8t64_8.2-4_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-4) ... Selecting previously unselected package bc. Preparing to unpack .../021-bc_1.07.1-4_i386.deb ... Unpacking bc (1.07.1-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../022-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../023-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../024-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../025-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../026-libparams-util-perl_1.102-3_i386.deb ... Unpacking libparams-util-perl (1.102-3) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../027-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../028-libdata-optlist-perl_0.114-1_all.deb ... Unpacking libdata-optlist-perl (0.114-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../029-libsub-exporter-perl_0.990-1_all.deb ... Unpacking libsub-exporter-perl (0.990-1) ... Selecting previously unselected package libsub-prototype-perl. Preparing to unpack .../030-libsub-prototype-perl_0.03-2+b2_i386.deb ... Unpacking libsub-prototype-perl (0.03-2+b2) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../031-libsub-override-perl_0.11-1_all.deb ... Unpacking libsub-override-perl (0.11-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../032-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../033-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../034-libelf1t64_0.191-1+b1_i386.deb ... Unpacking libelf1t64:i386 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../035-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../036-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../037-libxml2_2.9.14+dfsg-1.3+b3_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../038-gettext_0.21-14+b1_i386.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../039-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../040-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../041-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package mysql-common. Preparing to unpack .../042-mysql-common_5.8+1.1.0_all.deb ... Unpacking mysql-common (5.8+1.1.0) ... Selecting previously unselected package mariadb-common. Preparing to unpack .../043-mariadb-common_1%3a10.11.8-1_all.deb ... Unpacking mariadb-common (1:10.11.8-1) ... Selecting previously unselected package libmariadb3:i386. Preparing to unpack .../044-libmariadb3_1%3a10.11.8-1_i386.deb ... Unpacking libmariadb3:i386 (1:10.11.8-1) ... Selecting previously unselected package libssl-dev:i386. Preparing to unpack .../045-libssl-dev_3.2.1-3_i386.deb ... Unpacking libssl-dev:i386 (3.2.1-3) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../046-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.3.dfsg+really1.3.1-1) ... 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Setting up xfonts-utils (1:7.7+6) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-27) ... Setting up libcairo2:i386 (1.18.0-3+b1) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up doxygen (1.9.8+ds-2+b1) ... Setting up libxt6t64:i386 (1:1.2.1-1.2) ... Setting up libsub-override-perl (0.11-1) ... Setting up libpangoft2-1.0-0:i386 (1.52.2+ds-1) ... Setting up libcups2t64:i386 (2.4.7-1.2+b1) ... Setting up libpangocairo-1.0-0:i386 (1.52.2+ds-1) ... Setting up default-libmysqlclient-dev:i386 (1.1.0+b1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b2) ... Setting up libxi6:i386 (2:1.8.1-1) ... Setting up libxaw7:i386 (2:1.0.14-1+b2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up texlive-binaries (2023.20230311.66589-9+b2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2023.20240207-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libgs10-common (10.03.0~dfsg-1) ... Setting up debhelper (13.15.3) ... Setting up texlive-latex-base (2023.20240207-1) ... Setting up texlive-latex-recommended (2023.20240207-1) ... Setting up texlive-fonts-recommended (2023.20240207-1) ... Setting up libgs10:i386 (10.03.0~dfsg-1) ... Setting up ghostscript (10.03.0~dfsg-1) ... Setting up libheif-plugin-dav1d:i386 (1.17.6-1+b2) ... Setting up libheif-plugin-libde265:i386 (1.17.6-1+b2) ... Setting up libheif1:i386 (1.17.6-1+b2) ... Setting up libgd3:i386 (2.3.3-9+b3) ... Setting up libgvc6 (2.42.2-9+b1) ... Setting up graphviz (2.42.2-9+b1) ... Processing triggers for libc-bin (2.38-11) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.34-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/32104/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/32104/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/apophenia-1.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../apophenia_1.0+ds-8.1_source.changes dpkg-buildpackage: info: source package apophenia dpkg-buildpackage: info: source version 1.0+ds-8.1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steve Langasek dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --builddirectory=_build dh_auto_clean -O--builddirectory=_build dh_autoreconf_clean -O--builddirectory=_build dh_clean -O--builddirectory=_build debian/rules build dh build --builddirectory=_build dh_update_autotools_config -O--builddirectory=_build dh_autoreconf -O--builddirectory=_build aclocal: warning: couldn't open directory 'm4': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:10: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:10: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:10: the top level configure.ac:27: warning: The macro `AC_PROG_CC_C99' is obsolete. configure.ac:27: You should run autoupdate. ./lib/autoconf/c.m4:1659: AC_PROG_CC_C99 is expanded from... configure.ac:27: the top level configure.ac:29: warning: The macro `ACX_PTHREAD' is obsolete. configure.ac:29: You should run autoupdate. aclocal.m4:491: ACX_PTHREAD is expanded from... configure.ac:29: the top level configure.ac:36: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:36: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... aclocal.m4:927: AX_PATH_GSL is expanded from... configure.ac:36: the top level configure.ac:36: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:36: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... aclocal.m4:927: AX_PATH_GSL is expanded from... configure.ac:36: the top level configure.ac:45: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:45: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:45: the top level configure.ac:19: installing 'build-aux/compile' configure.ac:19: installing 'build-aux/config.guess' configure.ac:19: installing 'build-aux/config.sub' configure.ac:12: installing 'build-aux/install-sh' configure.ac:12: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' cmd/Makefile.am:27: warning: '%'-style pattern rules are a GNU make extension docs/Makefile.am:84: warning: '%'-style pattern rules are a GNU make extension automake: warning: source file '$(top_builddir)/eg/apop_map_row.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/apop_map_row' automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. automake: warning: source file '$(top_builddir)/eg/binning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/binning' automake: warning: source file '$(top_builddir)/eg/boot_clt.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/boot_clt' automake: warning: source file '$(top_builddir)/eg/cross_models.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/cross_models' automake: warning: source file '$(top_builddir)/eg/data_fill.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/data_fill' automake: warning: source file '$(top_builddir)/eg/db_fns.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/db_fns' automake: warning: source file '$(top_builddir)/eg/dconstrain.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/dconstrain' automake: warning: source file '$(top_builddir)/eg/dot_products.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/dot_products' automake: warning: source file '$(top_builddir)/eg/draw_to_db.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/draw_to_db' automake: warning: source file '$(top_builddir)/eg/entropy_model.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/entropy_model' automake: warning: source file '$(top_builddir)/eg/entropy_vector.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/entropy_vector' automake: warning: source file '$(top_builddir)/eg/f_test.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/f_test' automake: warning: source file '$(top_builddir)/eg/fake_logit.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/fake_logit' automake: warning: source file '$(top_builddir)/eg/fix_params.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/fix_params' automake: warning: source file '$(top_builddir)/eg/hills2.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/hills2' automake: warning: source file '$(top_builddir)/eg/iv.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/iv' automake: warning: source file '$(top_builddir)/eg/jack.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/jack' automake: warning: source file '$(top_builddir)/eg/jacobian.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/jacobian' automake: warning: source file '$(top_builddir)/eg/ks_tests.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ks_tests' automake: warning: source file '$(top_builddir)/eg/logit.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/logit' automake: warning: source file '$(top_builddir)/eg/ml_imputation.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/ml_imputation' automake: warning: source file '$(top_builddir)/eg/normalization_demo.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/normalization_demo' automake: warning: source file '$(top_builddir)/eg/ols.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ols' automake: warning: source file '$(top_builddir)/eg/ols_oneliner.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ols_oneliner' automake: warning: source file '$(top_builddir)/eg/parameterization.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/parameterization' automake: warning: source file '$(top_builddir)/eg/pmf_test.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/pmf_test' automake: warning: source file '$(top_builddir)/eg/simple_subsets.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/simple_subsets' automake: warning: source file '$(top_builddir)/eg/some_cdfs.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/some_cdfs' automake: warning: source file '$(top_builddir)/eg/t_test_by_rows.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/t_test_by_rows' automake: warning: source file '$(top_builddir)/eg/test_distances.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_distances' automake: warning: source file '$(top_builddir)/eg/test_fisher.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_fisher' automake: warning: source file '$(top_builddir)/eg/test_harmonic.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_harmonic' automake: warning: source file '$(top_builddir)/eg/test_kl_divergence.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_kl_divergence' automake: warning: source file '$(top_builddir)/eg/test_pruning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_pruning' automake: warning: source file '$(top_builddir)/eg/test_ranks.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_ranks' automake: warning: source file '$(top_builddir)/eg/test_regex.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_regex' automake: warning: source file '$(top_builddir)/eg/test_updating.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_updating' automake: warning: source file '$(top_builddir)/eg/transform.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/transform' parallel-tests: installing 'build-aux/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/apophenia-1.0+ds' dh_auto_configure -- --enable-maintainer-mode cd _build && ../configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-maintainer-mode checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if LD -Wl,--version-script works... yes checking for help2man... /usr/bin/help2man checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking how to run the C preprocessor... gcc -E checking whether gcc is Clang... no checking whether pthreads work with "-pthread" and "-lpthread"... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for gcc option to support OpenMP... -fopenmp checking for cos in -lm... yes checking for gsl-config... /usr/bin/gsl-config checking for GSL - version >= 1.12.0... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for mysqlclient... yes checking for SQLite3 library >= 3.0.0... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for egrep... (cached) /usr/bin/grep -E checking for float.h... yes checking for inttypes.h... (cached) yes checking for limits.h... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... (cached) yes checking whether struct tm is in sys/time.h or time.h... time.h checking for ptrdiff_t... yes checking for __attribute__... yes checking for GNU libc compatible malloc... yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for floor... no checking for memset... yes checking for pow... no checking for regcomp... yes checking for sqrt... no checking for strcasecmp... yes checking for asprintf... yes checking for bc... /usr/bin/bc checking for sqlite3... /usr/bin/sqlite3 checking whether to run extended tests... no dpkg-parsechangelog: error: cannot open file debian/changelog: No such file or directory checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating apophenia.pc config.status: creating apop.h config.status: creating Makefile config.status: creating transform/Makefile config.status: creating model/Makefile config.status: creating cmd/Makefile config.status: creating tests/Makefile config.status: creating docs/doxygen.conf config.status: creating docs/Makefile config.status: creating eg/Makefile config.status: creating tests/utilities_test config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/apophenia-1.0+ds' /usr/bin/make -C _build/docs doc make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' cat ../../model/apop_bernoulli.c ../../model/apop_beta.c ../../model/apop_dirichlet.c ../../model/apop_exponential.c ../../model/apop_gamma.c ../../model/apop_kerneld.c ../../model/apop_loess.c ../../model/apop_multinomial.c ../../model/apop_multivariate_normal.c ../../model/apop_normal.c ../../model/apop_ols.c ../../model/apop_pmf.c ../../model/apop_poisson.c ../../model/apop_probit.c ../../model/apop_t.c ../../model/apop_uniform.c ../../model/apop_wishart.c ../../model/apop_yule.c ../../model/apop_zipf.c ../../transform/apop_coordinate_transform.c ../../transform/apop_cross.c ../../transform/apop_dconstrain.c ../../transform/apop_fix_params.c ../../transform/apop_mixture.c | awk -f ../../docs/make_model_doc.awk > model_doc.h /usr/bin/dot -Tpng < ../../docs/structs.dot > structs.png Fontconfig error: No writable cache directories /usr/bin/mkdir -p include sed -e 's/__attribute.*;/;/;s/extern //' ../apop.h > include/apop.h doxygen doxygen.conf warning: Tag 'TCL_SUBST' at line 237 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1001 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1136 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1417 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1703 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1777 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 1875 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 2055 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2068 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 2077 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2119 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2126 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2339 of file 'doxygen.conf' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" for f in flake.gif search.gif right.png down.png tree.js ; do \ test -f ../../docs/$f && cp ../../docs/$f html/ ;\ done cp structs.png html/ sed -i -f ../../docs/edit_outline.sed html/index.html html/outline.html sed -i -f ../../docs/edit_group.sed html/group__models.html sed -i -f ../../docs/edit_width.sed html/*.html /build/reproducible-path/apophenia-1.0+ds/_build/../docs/adjust sed: can't read latex/Makefile: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/refman.tex: No such file or directory sed: can't read latex/Makefile: No such file or directory sed: couldn't open file edit_group.sed: No such file or directory sed: can't read latex/group__models.tex: No such file or directory grep: latex/group__all__public.tex: No such file or directory sed: -e expression #1, char 37: unexpected `,' sed: can't read latex/*tex: No such file or directory sed: can't read latex/*tex: No such file or directory sed: can't read latex/*tex: No such file or directory sed: can't read latex/doxygen.sty: No such file or directory sed: can't read latex/doxygen.sty: No such file or directory sed: can't read latex/doxygen.sty: No such file or directory rdfind -outputname /dev/null -makesymlinks true html Now scanning "html", found 225 files. Now have 225 files in total. Removed 0 files due to nonunique device and inode. Total size is 3847052 bytes or 4 MiB Removed 188 files due to unique sizes from list. 37 files left. Now eliminating candidates based on first bytes: removed 15 files from list. 22 files left. Now eliminating candidates based on last bytes: removed 0 files from list. 22 files left. Now eliminating candidates based on sha1 checksum: removed 16 files from list. 6 files left. It seems like you have 6 files that are not unique Totally, 856 B can be reduced. Now making results file /dev/null Now making symbolic links. creating Making 3 links. symlinks -r -c -s -v html absolute: /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/variables_7.js -> /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/all_9.js changed: /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/variables_7.js -> all_9.js absolute: /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/variables_8.js -> /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/all_a.js changed: /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/variables_8.js -> all_a.js absolute: /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/variables_13.js -> /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/all_17.js changed: /build/reproducible-path/apophenia-1.0+ds/_build/docs/html/search/variables_13.js -> all_17.js rm -f html/jquery.js rm -f html/formula.repository rm -f html/_formulas.tex html/_formulas.log make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[1]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds' dh_auto_build -O--builddirectory=_build -Napophenia-doc cd _build && make -j5 make[1]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' make all-recursive make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' Making all in transform make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_dconstrain.lo `test -f 'apop_dconstrain.c' || echo '../../transform/'`apop_dconstrain.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_fix_params.lo `test -f 'apop_fix_params.c' || echo '../../transform/'`apop_fix_params.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_coordinate_transform.lo `test -f 'apop_coordinate_transform.c' || echo '../../transform/'`apop_coordinate_transform.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_mixture.lo `test -f 'apop_mixture.c' || echo '../../transform/'`apop_mixture.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_cross.lo `test -f 'apop_cross.c' || echo '../../transform/'`apop_cross.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_fix_params.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_fix_params.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_dconstrain.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_dconstrain.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_coordinate_transform.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_coordinate_transform.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_cross.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_cross.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_mixture.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_mixture.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_coordinate_transform.c -o libapoptransform_la-apop_coordinate_transform.o >/dev/null 2>&1 ../../transform/apop_fix_params.c: In function 'apop_model_fix_params': ../../transform/apop_fix_params.c:266:39: warning: ', with some params fixed' directive output may be truncated writing 24 bytes into a region of size between 0 and 100 [-Wformat-truncation=] 266 | snprintf(model_out->name, 100, "%s, with some params fixed", model_in->name); | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:964, from /usr/include/gsl/gsl_errno.h:23, from /usr/include/gsl/gsl_rng.h:24, from ../apop.h:32, from ../../apop_internal.h:83, from ../../transform/apop_fix_params.c:8: In function 'snprintf', inlined from 'apop_model_fix_params' at ../../transform/apop_fix_params.c:266:5: /usr/include/i386-linux-gnu/bits/stdio2.h:54:10: note: '__builtin___snprintf_chk' output between 25 and 125 bytes into a destination of size 100 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_dconstrain.c -o libapoptransform_la-apop_dconstrain.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_cross.c -o libapoptransform_la-apop_cross.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_fix_params.c -o libapoptransform_la-apop_fix_params.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_mixture.c -o libapoptransform_la-apop_mixture.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=link gcc -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o libapoptransform.la libapoptransform_la-apop_dconstrain.lo libapoptransform_la-apop_fix_params.lo libapoptransform_la-apop_coordinate_transform.lo libapoptransform_la-apop_mixture.lo libapoptransform_la-apop_cross.lo libtool: link: ar cr .libs/libapoptransform.a .libs/libapoptransform_la-apop_dconstrain.o .libs/libapoptransform_la-apop_fix_params.o .libs/libapoptransform_la-apop_coordinate_transform.o .libs/libapoptransform_la-apop_mixture.o .libs/libapoptransform_la-apop_cross.o libtool: link: ranlib .libs/libapoptransform.a libtool: link: ( cd ".libs" && rm -f "libapoptransform.la" && ln -s "../libapoptransform.la" "libapoptransform.la" ) make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' Making all in model make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_bernoulli.lo `test -f 'apop_bernoulli.c' || echo '../../model/'`apop_bernoulli.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_beta.lo `test -f 'apop_beta.c' || echo '../../model/'`apop_beta.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_dirichlet.lo `test -f 'apop_dirichlet.c' || echo '../../model/'`apop_dirichlet.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_exponential.lo `test -f 'apop_exponential.c' || echo '../../model/'`apop_exponential.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_gamma.lo `test -f 'apop_gamma.c' || echo '../../model/'`apop_gamma.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_bernoulli.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_bernoulli.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_beta.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_beta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_dirichlet.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_dirichlet.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_exponential.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_exponential.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_gamma.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_gamma.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_dirichlet.c -o libapopmodel_la-apop_dirichlet.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_bernoulli.c -o libapopmodel_la-apop_bernoulli.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_exponential.c -o libapopmodel_la-apop_exponential.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_gamma.c -o libapopmodel_la-apop_gamma.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_beta.c -o libapopmodel_la-apop_beta.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_kerneld.lo `test -f 'apop_kerneld.c' || echo '../../model/'`apop_kerneld.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_loess.lo `test -f 'apop_loess.c' || echo '../../model/'`apop_loess.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_multinomial.lo `test -f 'apop_multinomial.c' || echo '../../model/'`apop_multinomial.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_kerneld.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_kerneld.o /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_multivariate_normal.lo `test -f 'apop_multivariate_normal.c' || echo '../../model/'`apop_multivariate_normal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_loess.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_loess.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multinomial.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multinomial.o /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_normal.lo `test -f 'apop_normal.c' || echo '../../model/'`apop_normal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multivariate_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multivariate_normal.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_normal.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multivariate_normal.c -o libapopmodel_la-apop_multivariate_normal.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_kerneld.c -o libapopmodel_la-apop_kerneld.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multinomial.c -o libapopmodel_la-apop_multinomial.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_ols.lo `test -f 'apop_ols.c' || echo '../../model/'`apop_ols.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_normal.c -o libapopmodel_la-apop_normal.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_ols.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_ols.o /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_pmf.lo `test -f 'apop_pmf.c' || echo '../../model/'`apop_pmf.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_poisson.lo `test -f 'apop_poisson.c' || echo '../../model/'`apop_poisson.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_pmf.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_pmf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_poisson.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_poisson.o /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_probit.lo `test -f 'apop_probit.c' || echo '../../model/'`apop_probit.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_poisson.c -o libapopmodel_la-apop_poisson.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_probit.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_probit.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_pmf.c -o libapopmodel_la-apop_pmf.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_t.lo `test -f 'apop_t.c' || echo '../../model/'`apop_t.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_ols.c -o libapopmodel_la-apop_ols.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_t.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_t.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_probit.c -o libapopmodel_la-apop_probit.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_t.c -o libapopmodel_la-apop_t.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_uniform.lo `test -f 'apop_uniform.c' || echo '../../model/'`apop_uniform.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_uniform.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_uniform.o /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_wishart.lo `test -f 'apop_wishart.c' || echo '../../model/'`apop_wishart.c /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_yule.lo `test -f 'apop_yule.c' || echo '../../model/'`apop_yule.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_wishart.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_wishart.o /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_zipf.lo `test -f 'apop_zipf.c' || echo '../../model/'`apop_zipf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_yule.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_yule.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_zipf.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_zipf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_uniform.c -o libapopmodel_la-apop_uniform.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_wishart.c -o libapopmodel_la-apop_wishart.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_yule.c -o libapopmodel_la-apop_yule.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_zipf.c -o libapopmodel_la-apop_zipf.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_loess.c -o libapopmodel_la-apop_loess.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=link gcc -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o libapopmodel.la libapopmodel_la-apop_bernoulli.lo libapopmodel_la-apop_beta.lo libapopmodel_la-apop_dirichlet.lo libapopmodel_la-apop_exponential.lo libapopmodel_la-apop_gamma.lo libapopmodel_la-apop_kerneld.lo libapopmodel_la-apop_loess.lo libapopmodel_la-apop_multinomial.lo libapopmodel_la-apop_multivariate_normal.lo libapopmodel_la-apop_normal.lo libapopmodel_la-apop_ols.lo libapopmodel_la-apop_pmf.lo libapopmodel_la-apop_poisson.lo libapopmodel_la-apop_probit.lo libapopmodel_la-apop_t.lo libapopmodel_la-apop_uniform.lo libapopmodel_la-apop_wishart.lo libapopmodel_la-apop_yule.lo libapopmodel_la-apop_zipf.lo libtool: link: ar cr .libs/libapopmodel.a .libs/libapopmodel_la-apop_bernoulli.o .libs/libapopmodel_la-apop_beta.o .libs/libapopmodel_la-apop_dirichlet.o .libs/libapopmodel_la-apop_exponential.o .libs/libapopmodel_la-apop_gamma.o .libs/libapopmodel_la-apop_kerneld.o .libs/libapopmodel_la-apop_loess.o .libs/libapopmodel_la-apop_multinomial.o .libs/libapopmodel_la-apop_multivariate_normal.o .libs/libapopmodel_la-apop_normal.o .libs/libapopmodel_la-apop_ols.o .libs/libapopmodel_la-apop_pmf.o .libs/libapopmodel_la-apop_poisson.o .libs/libapopmodel_la-apop_probit.o .libs/libapopmodel_la-apop_t.o .libs/libapopmodel_la-apop_uniform.o .libs/libapopmodel_la-apop_wishart.o .libs/libapopmodel_la-apop_yule.o .libs/libapopmodel_la-apop_zipf.o libtool: link: ranlib .libs/libapopmodel.a libtool: link: ( cd ".libs" && rm -f "libapopmodel.la" && ln -s "../libapopmodel.la" "libapopmodel.la" ) make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' Making all in . make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o asprintf.lo ../asprintf.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_arms.lo `test -f 'apop_arms.c' || echo '../'`apop_arms.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_asst.lo `test -f 'apop_asst.c' || echo '../'`apop_asst.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_bootstrap.lo `test -f 'apop_bootstrap.c' || echo '../'`apop_bootstrap.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_conversions.lo `test -f 'apop_conversions.c' || echo '../'`apop_conversions.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../asprintf.c -fPIC -DPIC -o .libs/asprintf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_arms.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_arms.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_bootstrap.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_bootstrap.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_conversions.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_conversions.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_asst.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_asst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../asprintf.c -o asprintf.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_data.lo `test -f 'apop_data.c' || echo '../'`apop_data.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_bootstrap.c -o libapopkernel_la-apop_bootstrap.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_asst.c -o libapopkernel_la-apop_asst.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_arms.c -o libapopkernel_la-apop_arms.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_db.lo `test -f 'apop_db.c' || echo '../'`apop_db.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_db.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_db.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_fexact.lo `test -f 'apop_fexact.c' || echo '../'`apop_fexact.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_fexact.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_fexact.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_hist.lo `test -f 'apop_hist.c' || echo '../'`apop_hist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_conversions.c -o libapopkernel_la-apop_conversions.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_hist.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_hist.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_data.c -o libapopkernel_la-apop_data.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_hist.c -o libapopkernel_la-apop_hist.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_db.c -o libapopkernel_la-apop_db.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_linear_algebra.lo `test -f 'apop_linear_algebra.c' || echo '../'`apop_linear_algebra.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_linear_constraint.lo `test -f 'apop_linear_constraint.c' || echo '../'`apop_linear_constraint.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_fexact.c -o libapopkernel_la-apop_fexact.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_algebra.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_algebra.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_constraint.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_constraint.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_constraint.c -o libapopkernel_la-apop_linear_constraint.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mapply.lo `test -f 'apop_mapply.c' || echo '../'`apop_mapply.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mapply.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mapply.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_algebra.c -o libapopkernel_la-apop_linear_algebra.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mcmc.lo `test -f 'apop_mcmc.c' || echo '../'`apop_mcmc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mcmc.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mcmc.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_missing_data.lo `test -f 'apop_missing_data.c' || echo '../'`apop_missing_data.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_missing_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_missing_data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mcmc.c -o libapopkernel_la-apop_mcmc.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mapply.c -o libapopkernel_la-apop_mapply.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_missing_data.c -o libapopkernel_la-apop_missing_data.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mle.lo `test -f 'apop_mle.c' || echo '../'`apop_mle.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mle.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mle.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_model.lo `test -f 'apop_model.c' || echo '../'`apop_model.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_model.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_model.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_name.lo `test -f 'apop_name.c' || echo '../'`apop_name.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_name.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_name.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_output.lo `test -f 'apop_output.c' || echo '../'`apop_output.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_output.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_output.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_rake.lo `test -f 'apop_rake.c' || echo '../'`apop_rake.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_name.c -o libapopkernel_la-apop_name.o >/dev/null 2>&1 ../apop_output.c: In function 'apop_data_print_core': ../apop_output.c:260:18: warning: argument 1 null where non-null expected [-Wnonnull] 260 | !strcmp(apop_opts.db_name_column, "row_names")) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ./apop.h:31, from ../apop_internal.h:83, from ../apop_output.c:7: /usr/include/string.h:156:12: note: in a call to function 'strcmp' declared 'nonnull' 156 | extern int strcmp (const char *__s1, const char *__s2) | ^~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mle.c -o libapopkernel_la-apop_mle.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_rake.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_rake.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_model.c -o libapopkernel_la-apop_model.o >/dev/null 2>&1 /bin/sh ./libtool 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-Werror=format-security -fopenmp -c ../apop_settings.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_settings.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_sort.lo `test -f 'apop_sort.c' || echo '../'`apop_sort.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_sort.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_sort.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_rake.c -o libapopkernel_la-apop_rake.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_stats.lo `test -f 'apop_stats.c' || echo '../'`apop_stats.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_settings.c -o libapopkernel_la-apop_settings.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_regression.c -o libapopkernel_la-apop_regression.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_stats.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_stats.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_tests.lo `test -f 'apop_tests.c' || echo '../'`apop_tests.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_tests.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_tests.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_sort.c -o libapopkernel_la-apop_sort.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_update.lo `test -f 'apop_update.c' || echo '../'`apop_update.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_update.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_update.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_vtables.lo `test -f 'apop_vtables.c' || echo '../'`apop_vtables.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_vtables.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_vtables.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_update.c -o libapopkernel_la-apop_update.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_tests.c -o libapopkernel_la-apop_tests.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_vtables.c -o libapopkernel_la-apop_vtables.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_stats.c -o libapopkernel_la-apop_stats.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=link gcc -pthread -fopenmp -I/usr/include/mariadb/ -I/usr/include -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o libapopkernel.la libapopkernel_la-apop_arms.lo libapopkernel_la-apop_asst.lo libapopkernel_la-apop_bootstrap.lo libapopkernel_la-apop_conversions.lo libapopkernel_la-apop_data.lo 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.libs/libapopkernel_la-apop_linear_algebra.o .libs/libapopkernel_la-apop_linear_constraint.o .libs/libapopkernel_la-apop_mapply.o .libs/libapopkernel_la-apop_mcmc.o .libs/libapopkernel_la-apop_missing_data.o .libs/libapopkernel_la-apop_mle.o .libs/libapopkernel_la-apop_model.o .libs/libapopkernel_la-apop_name.o .libs/libapopkernel_la-apop_output.o .libs/libapopkernel_la-apop_rake.o .libs/libapopkernel_la-apop_regression.o .libs/libapopkernel_la-apop_settings.o .libs/libapopkernel_la-apop_sort.o .libs/libapopkernel_la-apop_stats.o .libs/libapopkernel_la-apop_tests.o .libs/libapopkernel_la-apop_update.o .libs/libapopkernel_la-apop_vtables.o libtool: link: ranlib .libs/libapopkernel.a libtool: link: ( cd ".libs" && rm -f "libapopkernel.la" && ln -s "../libapopkernel.la" "libapopkernel.la" ) /bin/sh ./libtool --tag=CC --mode=link gcc -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -version-info 2:0:0 -Wl,--version-script=../apophenia.map -Wl,-z,relro -Wl,-z,now -o libapophenia.la -rpath /usr/lib/i386-linux-gnu asprintf.lo libapopkernel.la transform/libapoptransform.la model/libapopmodel.la -L/usr/lib/i386-linux-gnu/ -lmariadb -L/usr/lib -lsqlite3 -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -lpthread -lm libtool: link: gcc -shared -fPIC -DPIC .libs/asprintf.o -Wl,--whole-archive ./.libs/libapopkernel.a transform/.libs/libapoptransform.a model/.libs/libapopmodel.a -Wl,--no-whole-archive -L/usr/lib/i386-linux-gnu/ -lmariadb -L/usr/lib -lsqlite3 -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lpthread -lm -g -O3 -fstack-protector-strong -fopenmp -Wl,--version-script=../apophenia.map -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -pthread -Wl,-soname -Wl,libapophenia.so.2 -o .libs/libapophenia.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libapophenia.so.2" && ln -s "libapophenia.so.2.0.0" "libapophenia.so.2") libtool: link: (cd ".libs" && rm -f "libapophenia.so" && ln -s "libapophenia.so.2.0.0" "libapophenia.so") libtool: link: (cd .libs/libapophenia.lax/libapopkernel.a && ar x "/build/reproducible-path/apophenia-1.0+ds/_build/./.libs/libapopkernel.a") libtool: link: (cd .libs/libapophenia.lax/libapoptransform.a && ar x "/build/reproducible-path/apophenia-1.0+ds/_build/transform/.libs/libapoptransform.a") libtool: link: (cd .libs/libapophenia.lax/libapopmodel.a && ar x "/build/reproducible-path/apophenia-1.0+ds/_build/model/.libs/libapopmodel.a") libtool: link: ar cr .libs/libapophenia.a asprintf.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_arms.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_asst.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_bootstrap.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_conversions.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_data.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_db.o 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.libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_yule.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_zipf.o libtool: link: ranlib .libs/libapophenia.a libtool: link: rm -fr .libs/libapophenia.lax libtool: link: ( cd ".libs" && rm -f "libapophenia.la" && ln -s "../libapophenia.la" "libapophenia.la" ) make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' Making all in cmd make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_text_to_db.o ../../cmd/apop_text_to_db.c gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_db_to_crosstab.o ../../cmd/apop_db_to_crosstab.c gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_plot_query.o ../../cmd/apop_plot_query.c /bin/sh ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o apop_db_to_crosstab apop_db_to_crosstab.o ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm /bin/sh ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o apop_text_to_db apop_text_to_db.o ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm /bin/sh ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o apop_plot_query apop_plot_query.o ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm libtool: link: gcc -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_db_to_crosstab apop_db_to_crosstab.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_text_to_db apop_text_to_db.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -I ../.. -I/usr/include -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_plot_query apop_plot_query.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_db_to_crosstab.h2m \ -n "command line utility to convert a three-column table to a crosstab" \ -o apop_db_to_crosstab.1 \ ../cmd/apop_db_to_crosstab /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_text_to_db.h2m \ -n "command line utility to convert a text file into a database table" \ -o apop_text_to_db.1 \ ../cmd/apop_text_to_db /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_plot_query.h2m \ -n "command line utility to take in a query and put out a Gnuplot table file" \ -o apop_plot_query.1 \ ../cmd/apop_plot_query make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' Making all in eg make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' Making all in tests make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' Making all in docs make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' make[1]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' dh_auto_test -O--builddirectory=_build -Napophenia-doc cd _build && make -j5 check "TESTSUITEFLAGS=-j5 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' Making check in transform make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' Making check in model make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' Making check in . make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' Making check in cmd make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' Making check in eg make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' Making check in tests make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make db_tests error_test factors nist_tests sort_example test_apop ../eg/apop_map_row ../eg/binning ../eg/boot_clt ../eg/data_fill ../eg/draw_to_db ../eg/db_fns ../eg/dot_products ../eg/entropy_vector ../eg/iv ../eg/ks_tests ../eg/logit ../eg/fake_logit ../eg/normalization_demo ../eg/ols ../eg/ols_oneliner ../eg/parameterization ../eg/simple_subsets ../eg/t_test_by_rows ../eg/test_distances ../eg/test_fisher ../eg/test_harmonic ../eg/test_pruning ../eg/test_regex make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o db_tests.o ../../tests/db_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o error_test.o ../../tests/error_test.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o factors.o ../../tests/factors.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o nist_tests.o ../../tests/nist_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o sort_example.o ../../tests/sort_example.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_apop.o ../../tests/test_apop.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_map_row.o `test -f '../eg/apop_map_row.c' || echo '../../tests/'`../eg/apop_map_row.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o binning.o `test -f '../eg/binning.c' || echo '../../tests/'`../eg/binning.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o boot_clt.o `test -f '../eg/boot_clt.c' || echo '../../tests/'`../eg/boot_clt.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o data_fill.o `test -f '../eg/data_fill.c' || echo '../../tests/'`../eg/data_fill.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o draw_to_db.o `test -f '../eg/draw_to_db.c' || echo '../../tests/'`../eg/draw_to_db.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o db_fns.o `test -f '../eg/db_fns.c' || echo '../../tests/'`../eg/db_fns.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o dot_products.o `test -f '../eg/dot_products.c' || echo '../../tests/'`../eg/dot_products.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o entropy_vector.o `test -f '../eg/entropy_vector.c' || echo '../../tests/'`../eg/entropy_vector.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o iv.o `test -f '../eg/iv.c' || echo '../../tests/'`../eg/iv.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ks_tests.o `test -f '../eg/ks_tests.c' || echo '../../tests/'`../eg/ks_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o logit.o `test -f '../eg/logit.c' || echo '../../tests/'`../eg/logit.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fake_logit.o `test -f '../eg/fake_logit.c' || echo '../../tests/'`../eg/fake_logit.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o normalization_demo.o `test -f '../eg/normalization_demo.c' || echo '../../tests/'`../eg/normalization_demo.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ols.o `test -f '../eg/ols.c' || echo '../../tests/'`../eg/ols.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ols_oneliner.o `test -f '../eg/ols_oneliner.c' || echo '../../tests/'`../eg/ols_oneliner.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o parameterization.o `test -f '../eg/parameterization.c' || echo '../../tests/'`../eg/parameterization.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o simple_subsets.o `test -f '../eg/simple_subsets.c' || echo '../../tests/'`../eg/simple_subsets.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o t_test_by_rows.o `test -f '../eg/t_test_by_rows.c' || echo '../../tests/'`../eg/t_test_by_rows.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_distances.o `test -f '../eg/test_distances.c' || echo '../../tests/'`../eg/test_distances.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_fisher.o `test -f '../eg/test_fisher.c' || echo '../../tests/'`../eg/test_fisher.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration 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-lm -Wl,-z,relro -Wl,-z,now -o ../eg/normalization_demo normalization_demo.o /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/ols ols.o /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/ols_oneliner ols_oneliner.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/fake_logit fake_logit.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/parameterization parameterization.o /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/simple_subsets simple_subsets.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/normalization_demo normalization_demo.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/ols ols.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/ols_oneliner ols_oneliner.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/parameterization parameterization.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/t_test_by_rows t_test_by_rows.o /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_distances test_distances.o /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_fisher test_fisher.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/simple_subsets simple_subsets.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_harmonic test_harmonic.o /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_pruning test_pruning.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/t_test_by_rows t_test_by_rows.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_distances test_distances.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_fisher test_fisher.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_harmonic test_harmonic.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_regex test_regex.o /bin/sh ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o test_apop test_apop.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_pruning test_pruning.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_regex test_regex.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/test_apop test_apop.o ../.libs/libapophenia.so -L/usr/lib/i386-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make check-TESTS make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make[4]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' PASS: error_test PASS: nist_tests PASS: factors PASS: sort_example PASS: db_tests PASS: ../eg/binning PASS: ../eg/apop_map_row PASS: ../eg/data_fill PASS: ../eg/draw_to_db PASS: utilities_test PASS: ../eg/dot_products PASS: ../eg/entropy_vector PASS: ../eg/iv PASS: ../eg/ks_tests PASS: ../eg/db_fns PASS: ../eg/normalization_demo PASS: ../eg/ols PASS: ../eg/ols_oneliner PASS: ../eg/parameterization PASS: ../eg/simple_subsets PASS: ../eg/t_test_by_rows PASS: ../eg/test_distances PASS: ../eg/test_fisher PASS: ../eg/test_harmonic PASS: ../eg/test_pruning PASS: ../eg/test_regex PASS: ../eg/fake_logit PASS: ../eg/boot_clt PASS: ../eg/logit PASS: test_apop ============================================================================ Testsuite summary for apophenia 1.0 ============================================================================ # TOTAL: 30 # PASS: 30 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' Making check in docs make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[1]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --builddirectory=_build dh_testroot -O--builddirectory=_build dh_prep -O--builddirectory=_build dh_auto_install -O--builddirectory=_build -Napophenia-doc cd _build && make -j1 install DESTDIR=/build/reproducible-path/apophenia-1.0\+ds/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' Making install in transform make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/transform' Making install in model make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/model' Making install in . make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build' /usr/bin/mkdir -p '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu' /bin/sh ./libtool --mode=install /usr/bin/install -c libapophenia.la '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/libapophenia.so.2.0.0 /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu/libapophenia.so.2.0.0 libtool: install: (cd /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libapophenia.so.2.0.0 libapophenia.so.2 || { rm -f libapophenia.so.2 && ln -s libapophenia.so.2.0.0 libapophenia.so.2; }; }) libtool: install: (cd /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libapophenia.so.2.0.0 libapophenia.so || { rm -f libapophenia.so && ln -s libapophenia.so.2.0.0 libapophenia.so; }; }) libtool: install: /usr/bin/install -c .libs/libapophenia.lai /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu/libapophenia.la libtool: install: /usr/bin/install -c .libs/libapophenia.a /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu/libapophenia.a libtool: install: chmod 644 /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu/libapophenia.a libtool: install: ranlib /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu/libapophenia.a libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/include' /usr/bin/install -c -m 644 apop.h '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/include' /usr/bin/mkdir -p '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 apophenia.pc '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' Making install in cmd make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' /usr/bin/mkdir -p '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/bin' /bin/sh ../libtool --mode=install /usr/bin/install -c apop_text_to_db apop_db_to_crosstab apop_plot_query '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/bin' libtool: warning: '../libapophenia.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/apop_text_to_db /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/bin/apop_text_to_db libtool: warning: '../libapophenia.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/apop_db_to_crosstab /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/bin/apop_db_to_crosstab libtool: warning: '../libapophenia.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/apop_plot_query /build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/bin/apop_plot_query /usr/bin/mkdir -p '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 apop_text_to_db.1 apop_db_to_crosstab.1 apop_plot_query.1 '/build/reproducible-path/apophenia-1.0+ds/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/cmd' Making install in eg make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/eg' Making install in tests make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/tests' Making install in docs make[2]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[3]: Entering directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[2]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build/docs' make[1]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds/_build' dh_install -O--builddirectory=_build dh_installdocs -O--builddirectory=_build dh_installdocs: warning: Cannot auto-detect main package for apophenia-doc. If the default is wrong, please use --doc-main-package dh_installchangelogs -O--builddirectory=_build dh_installexamples -O--builddirectory=_build dh_installexamples: warning: Cannot auto-detect main package for apophenia-doc. If the default is wrong, please use --doc-main-package dh_installman -O--builddirectory=_build dh_installinit -O--builddirectory=_build dh_installsystemduser -O--builddirectory=_build dh_lintian -O--builddirectory=_build dh_perl -O--builddirectory=_build dh_link -O--builddirectory=_build dh_strip_nondeterminism -O--builddirectory=_build debian/rules override_dh_compress-indep make[1]: Entering directory '/build/reproducible-path/apophenia-1.0+ds' dh_compress -X.pdf -Xexamples make[1]: Leaving directory '/build/reproducible-path/apophenia-1.0+ds' dh_compress -O--builddirectory=_build -Napophenia-doc dh_fixperms -O--builddirectory=_build dh_missing -O--builddirectory=_build dh_missing: warning: usr/lib/i386-linux-gnu/libapophenia.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: apophenia-bin (3), apophenia-doc (0), libapophenia2-dev (4), libapophenia2t64 (2) * dh_installdocs: apophenia-bin (0), apophenia-doc (1), libapophenia2-dev (0), libapophenia2t64 (0) * dh_installexamples: apophenia-bin (0), apophenia-doc (49), libapophenia2-dev (0), libapophenia2t64 (0) * dh_installman: apophenia-bin (3), apophenia-doc (0), libapophenia2-dev (0), libapophenia2t64 (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "i386-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz -O--builddirectory=_build dh_strip -O--builddirectory=_build dh_makeshlibs -O--builddirectory=_build dh_shlibdeps -O--builddirectory=_build dh_installdeb -O--builddirectory=_build dh_gencontrol -O--builddirectory=_build dh_md5sums -O--builddirectory=_build dh_builddeb -O--builddirectory=_build dpkg-deb: building package 'libapophenia2t64' in '../libapophenia2t64_1.0+ds-8.1_i386.deb'. dpkg-deb: building package 'libapophenia2-dev' in '../libapophenia2-dev_1.0+ds-8.1_i386.deb'. dpkg-deb: building package 'apophenia-bin-dbgsym' in '../apophenia-bin-dbgsym_1.0+ds-8.1_i386.deb'. dpkg-deb: building package 'apophenia-doc' in '../apophenia-doc_1.0+ds-8.1_all.deb'. dpkg-deb: building package 'libapophenia2t64-dbgsym' in '../libapophenia2t64-dbgsym_1.0+ds-8.1_i386.deb'. dpkg-deb: building package 'apophenia-bin' in '../apophenia-bin_1.0+ds-8.1_i386.deb'. dpkg-genbuildinfo --build=binary -O../apophenia_1.0+ds-8.1_i386.buildinfo dpkg-genchanges --build=binary -O../apophenia_1.0+ds-8.1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/32104/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/32104/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/32104 and its subdirectories I: Current time: Sat Jun 21 12:13:32 +14 2025 I: pbuilder-time-stamp: 1750457612