Mon May 8 22:42:59 UTC 2023 I: starting to build adapterremoval/bookworm/amd64 on jenkins on '2023-05-08 22:42' Mon May 8 22:42:59 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_26/11817/console.log Mon May 8 22:42:59 UTC 2023 I: Downloading source for bookworm/adapterremoval=2.3.3-2 --2023-05-08 22:43:00-- http://cdn-fastly.deb.debian.org/debian/pool/main/a/adapterremoval/adapterremoval_2.3.3-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2205 (2.2K) [text/prs.lines.tag] Saving to: ‘adapterremoval_2.3.3-2.dsc’ 0K .. 100% 41.8M=0s 2023-05-08 22:43:00 (41.8 MB/s) - ‘adapterremoval_2.3.3-2.dsc’ saved [2205/2205] Mon May 8 22:43:00 UTC 2023 I: adapterremoval_2.3.3-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: adapterremoval Binary: adapterremoval, adapterremoval-examples Architecture: any all Version: 2.3.3-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Kevin Murray Homepage: https://github.com/MikkelSchubert/adapterremoval Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/adapterremoval Vcs-Git: https://salsa.debian.org/med-team/adapterremoval.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, libgtest-dev, markdown Package-List: adapterremoval deb science optional arch=any adapterremoval-examples deb science optional arch=all Checksums-Sha1: ab3364031b7e435188f80190e073da6edb5572e3 720928 adapterremoval_2.3.3.orig.tar.gz bd3cbf91df37951356c8c225ca4231c50bcd44a1 4912 adapterremoval_2.3.3-2.debian.tar.xz Checksums-Sha256: a1bdc054319ede085fc8a4e9867c23ffed7df5e97b99d52221b7c587d19418fc 720928 adapterremoval_2.3.3.orig.tar.gz c9797bc3a5b0e6b6d15459d4b790f0af2c963430250b24e01b17342f11ed7a54 4912 adapterremoval_2.3.3-2.debian.tar.xz Files: 3215a4a6e966200cf4bb8d1189b53ae0 720928 adapterremoval_2.3.3.orig.tar.gz 74dfb9efe05c35d3c40ca3c22bcc85be 4912 adapterremoval_2.3.3-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOBt9oRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGtdQ//RvReDarBKRgKDvYiY/U2lEXMGnIQtmsZ Tbs4fqNdt+yg3yliFLvZAcH8FfjpEYzdgB1jmsgsE9evl3mDo3d7ZDOUt3wooLXi 0EiLu6MLGXyOzlgW1bcwGMFXgsEJRfPY4VbpwIkZiKfrYeFBJEDtx7HOUYD4Ooi7 tlK0iPjcWowqgQMrrxRnjSl8e/9CEDPSD0N1ejFYje5yDo0ZFU/cuj14fRL81PDl yW+sgTzFYlakryJeFSH9NDOHJG/Xe7CKUESEeYN9XAapbnf5m3BMtJJYrmHUTfcN IttQbxJWxXfjFymbC/6RKI7+uSAxYVzD9qyCacpEb0umuPyWHtmSzvvt2tzF5hmq 7MxvgFHam3Gh2uVqV92KbADYjMy55P9++ZbcUoBOvP5lEDiA+oizKZSvlP2guE9d aYucjyUgpx00JmnjnV5GA+3zth0QN6jOdKjSD8XFIjhj6vk4+aGIiSwBRkjKw6eQ NugPGGbLjAIycoCuxY0CWiVodlQfKS9dvOci5/RVjTppisxy5Wo0M70HKvcb0BSN wTf5lqV56Z2x9PSQXae5LoHtCKckLZEC7oLTMRdnUtig1m1a4G1NTO/jmVkjIkAK A4Ua1JR/lTbqaln3ZT0l8AEg/UJ2nRI1rgRBewg7LFWVtuVQDh8mwJGhn2IlfBJO lyN+ll1mxPI= =WYSH -----END PGP SIGNATURE----- Mon May 8 22:43:00 UTC 2023 I: Checking whether the package is not for us Mon May 8 22:43:00 UTC 2023 I: Starting 1st build on remote node ionos5-amd64.debian.net. Mon May 8 22:43:00 UTC 2023 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Mon May 8 22:47:04 UTC 2023 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jun 9 17:06:05 -12 2024 I: pbuilder-time-stamp: 1717995965 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [adapterremoval_2.3.3-2.dsc] I: copying [./adapterremoval_2.3.3.orig.tar.gz] I: copying [./adapterremoval_2.3.3-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Nov 25 18:53:14 2022 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./adapterremoval_2.3.3-2.dsc: no acceptable signature found dpkg-source: info: extracting adapterremoval in adapterremoval-2.3.3 dpkg-source: info: unpacking adapterremoval_2.3.3.orig.tar.gz dpkg-source: info: unpacking adapterremoval_2.3.3-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2475243/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3d0ce107a02f4702b87fd5c718bc7ac3' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2475243' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lTDTRnDy/pbuilderrc_xHac --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lTDTRnDy/b1 --logfile b1/build.log adapterremoval_2.3.3-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos5-amd64 6.1.0-0.deb11.6-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.15-1~bpo11+1 (2023-03-16) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 2023 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 2023 more -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/2475243/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, libgtest-dev, markdown dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on markdown; however: Package markdown is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbz2-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgtest-dev{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} markdown{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 20.4 MB of archives. After unpacking 79.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 11 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 googletest all 1.12.1-0.2 [506 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libbz2-dev amd64 1.0.8-5+b1 [30.9 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libgtest-dev amd64 1.12.1-0.2 [240 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 markdown all 1.0.1-12 [17.7 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Fetched 20.4 MB in 0s (62.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../02-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_amd64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_amd64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_amd64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_amd64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../22-libelf1_0.188-2.1_amd64.deb ... Unpacking libelf1:amd64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_amd64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../24-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_amd64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package googletest. Preparing to unpack .../30-googletest_1.12.1-0.2_all.deb ... Unpacking googletest (1.12.1-0.2) ... Selecting previously unselected package libbz2-dev:amd64. Preparing to unpack .../31-libbz2-dev_1.0.8-5+b1_amd64.deb ... Unpacking libbz2-dev:amd64 (1.0.8-5+b1) ... Selecting previously unselected package libgtest-dev:amd64. Preparing to unpack .../32-libgtest-dev_1.12.1-0.2_amd64.deb ... Unpacking libgtest-dev:amd64 (1.12.1-0.2) ... Selecting previously unselected package markdown. Preparing to unpack .../33-markdown_1.0.1-12_all.deb ... Unpacking markdown (1.0.1-12) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../34-zlib1g-dev_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up libpipeline1:amd64 (1.5.7-1) ... Setting up libicu72:amd64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libmagic1:amd64 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up googletest (1.12.1-0.2) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up markdown (1.0.1-12) ... Setting up libbz2-dev:amd64 (1.0.8-5+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libgtest-dev:amd64 (1.12.1-0.2) ... Setting up libtool (2.4.7-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/adapterremoval-2.3.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../adapterremoval_2.3.3-2_source.changes dpkg-buildpackage: info: source package adapterremoval dpkg-buildpackage: info: source version 2.3.3-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j16 clean make[1]: Entering directory '/build/adapterremoval-2.3.3' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Cleaning tests ... Cleaning documentation ... Cleaning ... make[1]: Leaving directory '/build/adapterremoval-2.3.3' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/adapterremoval-2.3.3' dh_auto_build make -j16 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/adapterremoval-2.3.3' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Building build/main/adapterset.o from src/adapterset.cpp Building build/main/alignment.o from src/alignment.cpp Building build/main/alignment_tables.o from src/alignment_tables.cpp Building build/main/argparse.o from src/argparse.cpp Building build/main/barcode_table.o from src/barcode_table.cpp Building build/main/debug.o from src/debug.cpp Building build/main/demultiplex.o from src/demultiplex.cpp Building build/main/fastq.o from src/fastq.cpp Building build/main/fastq_enc.o from src/fastq_enc.cpp Building build/main/fastq_io.o from src/fastq_io.cpp Building build/main/linereader.o from src/linereader.cpp Building build/main/linereader_joined.o from src/linereader_joined.cpp Building build/main/main_adapter_id.o from src/main_adapter_id.cpp Building build/main/main_adapter_rm.o from src/main_adapter_rm.cpp Building build/main/main_demultiplex.o from src/main_demultiplex.cpp Building build/main/managed_writer.o from src/managed_writer.cpp Building build/main/scheduler.o from src/scheduler.cpp Building build/main/strutils.o from src/strutils.cpp Building build/main/threads.o from src/threads.cpp Building build/main/timer.o from src/timer.cpp Building build/main/trimmed_reads.o from src/trimmed_reads.cpp Building build/main/userconfig.o from src/userconfig.cpp Building build/main/main.o from src/main.cpp Linking executable build/AdapterRemoval make[2]: Leaving directory '/build/adapterremoval-2.3.3' markdown README.md > README.html make[1]: Leaving directory '/build/adapterremoval-2.3.3' debian/rules override_dh_auto_test make[1]: Entering directory '/build/adapterremoval-2.3.3' # dh_auto_test make test make[2]: Entering directory '/build/adapterremoval-2.3.3' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Building build/tests/main_test.o from tests/unit/main_test.cpp Building build/tests/debug.o from src/debug.cpp Building build/tests/alignment.o from src/alignment.cpp Building build/tests/alignment_tables.o from src/alignment_tables.cpp Building build/tests/alignment_test.o from tests/unit/alignment_test.cpp Building build/tests/argparse.o from src/argparse.cpp Building build/tests/argparse_test.o from tests/unit/argparse_test.cpp Building build/tests/barcodes_test.o from tests/unit/barcodes_test.cpp Building build/tests/barcode_table.o from src/barcode_table.cpp Building build/tests/fastq.o from src/fastq.cpp Building build/tests/fastq_test.o from tests/unit/fastq_test.cpp Building build/tests/fastq_enc.o from src/fastq_enc.cpp Building build/tests/fastq_enc_test.o from tests/unit/fastq_enc_test.cpp Building build/tests/strutils.o from src/strutils.cpp Building build/tests/strutils_test.o from tests/unit/strutils_test.cpp Linking executable build/tests/main Running unit tests =============================================================================== All tests passed (827 assertions in 268 test cases) make[2]: Leaving directory '/build/adapterremoval-2.3.3' make clean_tests make[2]: Entering directory '/build/adapterremoval-2.3.3' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Cleaning tests ... removed 'build/tests/main' removed 'build/tests/strutils_test.deps' removed 'build/tests/strutils_test.o' removed 'build/tests/strutils.deps' removed 'build/tests/strutils.o' removed 'build/tests/fastq_enc_test.deps' removed 'build/tests/fastq_enc_test.o' removed 'build/tests/fastq_enc.deps' removed 'build/tests/fastq_enc.o' removed 'build/tests/fastq_test.deps' removed 'build/tests/fastq_test.o' removed 'build/tests/fastq.deps' removed 'build/tests/fastq.o' removed 'build/tests/barcode_table.deps' removed 'build/tests/barcode_table.o' removed 'build/tests/barcodes_test.deps' removed 'build/tests/barcodes_test.o' removed 'build/tests/argparse_test.deps' removed 'build/tests/argparse_test.o' removed 'build/tests/argparse.deps' removed 'build/tests/argparse.o' removed 'build/tests/alignment_test.deps' removed 'build/tests/alignment_test.o' removed 'build/tests/alignment_tables.deps' removed 'build/tests/alignment_tables.o' removed 'build/tests/alignment.deps' removed 'build/tests/alignment.o' removed 'build/tests/debug.deps' removed 'build/tests/debug.o' removed 'build/tests/main_test.deps' removed 'build/tests/main_test.o' removed directory 'build/tests' make[2]: Leaving directory '/build/adapterremoval-2.3.3' make[1]: Leaving directory '/build/adapterremoval-2.3.3' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/adapterremoval-2.3.3' make PREFIX=/build/adapterremoval-2.3.3/debian/adapterremoval/usr make[2]: Entering directory '/build/adapterremoval-2.3.3' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/adapterremoval-2.3.3' # Hmmm, this does nothing ... make[1]: Leaving directory '/build/adapterremoval-2.3.3' dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/adapterremoval-2.3.3' dh_installchangelogs CHANGES.md make[1]: Leaving directory '/build/adapterremoval-2.3.3' dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/adapterremoval-2.3.3' dh_fixperms find debian -name benchmark.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/build/adapterremoval-2.3.3' dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'adapterremoval' in '../adapterremoval_2.3.3-2_amd64.deb'. dpkg-deb: building package 'adapterremoval-dbgsym' in '../adapterremoval-dbgsym_2.3.3-2_amd64.deb'. dpkg-deb: building package 'adapterremoval-examples' in '../adapterremoval-examples_2.3.3-2_all.deb'. dpkg-genbuildinfo --build=binary -O../adapterremoval_2.3.3-2_amd64.buildinfo dpkg-genchanges --build=binary -O../adapterremoval_2.3.3-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2475243 and its subdirectories I: Current time: Sun Jun 9 17:10:06 -12 2024 I: pbuilder-time-stamp: 1717996206 Mon May 8 22:47:04 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Mon May 8 22:47:04 UTC 2023 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Mon May 8 22:55:25 UTC 2023 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Mon May 8 22:55:26 UTC 2023 I: adapterremoval_2.3.3-2_amd64.changes: Format: 1.8 Date: Sat, 26 Nov 2022 07:50:58 +0100 Source: adapterremoval Binary: adapterremoval adapterremoval-dbgsym adapterremoval-examples Architecture: amd64 all Version: 2.3.3-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: adapterremoval - rapid adapter trimming, identification, and read merging of gene adapterremoval-examples - rapid adapter trimming, identification, and read merging (example Changes: adapterremoval (2.3.3-2) unstable; urgency=medium . * Fix watch file * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: 21726440b484a1a8dfa7856cef20e89d809694ef 2898968 adapterremoval-dbgsym_2.3.3-2_amd64.deb c0780a3bee9d31b189608cf8b582090c645dd0fc 379692 adapterremoval-examples_2.3.3-2_all.deb 8b0f9e161e356c62bda3626fe98d3d0c43279863 5641 adapterremoval_2.3.3-2_amd64.buildinfo fc8848d4363c9d41efda76c361eac3070d743aac 190764 adapterremoval_2.3.3-2_amd64.deb Checksums-Sha256: d775759c970fabdaffae9758f862639cc16c9f73c60646b2d8052070144fe7e1 2898968 adapterremoval-dbgsym_2.3.3-2_amd64.deb bdb83632d186b1b78b0defb1196d43681f69b5413f368f9b58f495f20996ef58 379692 adapterremoval-examples_2.3.3-2_all.deb ad3e212260127f475643c4ea4ab996163a228c9344259c0c0a1433ccae5509da 5641 adapterremoval_2.3.3-2_amd64.buildinfo 24b37fb5c16da45273338b4498c07e1e5639a1e2b8b1a67d59c9b951b1c23b5e 190764 adapterremoval_2.3.3-2_amd64.deb Files: 27270fab52186aac80056e0eb8901518 2898968 debug optional adapterremoval-dbgsym_2.3.3-2_amd64.deb 6b64cf655a2d991dbca4e2c7023f39b7 379692 science optional adapterremoval-examples_2.3.3-2_all.deb 7b92a0b208d576bb3cd8a3caea24d77f 5641 science optional adapterremoval_2.3.3-2_amd64.buildinfo e23775d05ce359426187696573d476cd 190764 science optional adapterremoval_2.3.3-2_amd64.deb Mon May 8 22:55:27 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.lTDTRnDy/adapterremoval_2.3.3-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.lTDTRnDy/adapterremoval_2.3.3-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.lTDTRnDy/adapterremoval_2.3.3-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.lTDTRnDy/b1/adapterremoval_2.3.3-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.lTDTRnDy/b2/adapterremoval_2.3.3-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.390s) 0.390s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.092s) 0.091s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon May 8 22:56:45 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Mon May 8 22:56:45 UTC 2023 I: adapterremoval from bookworm built successfully and reproducibly on amd64. Mon May 8 22:56:48 UTC 2023 I: Submitting .buildinfo files to external archives: Mon May 8 22:56:48 UTC 2023 I: Submitting 8.0K b1/adapterremoval_2.3.3-2_amd64.buildinfo.asc Mon May 8 22:56:50 UTC 2023 I: Submitting 8.0K b2/adapterremoval_2.3.3-2_amd64.buildinfo.asc Mon May 8 22:56:51 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 8 22:56:51 UTC 2023 I: Done submitting .buildinfo files. Mon May 8 22:56:51 UTC 2023 I: Removing signed adapterremoval_2.3.3-2_amd64.buildinfo.asc files: removed './b1/adapterremoval_2.3.3-2_amd64.buildinfo.asc' removed './b2/adapterremoval_2.3.3-2_amd64.buildinfo.asc'