Mon May 15 13:34:25 UTC 2023 I: starting to build libbio-scf-perl/bookworm/arm64 on jenkins on '2023-05-15 13:34' Mon May 15 13:34:25 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_26/8472/console.log Mon May 15 13:34:25 UTC 2023 I: Downloading source for bookworm/libbio-scf-perl=1.03-6 --2023-05-15 13:34:25-- http://cdn-fastly.deb.debian.org/debian/pool/main/libb/libbio-scf-perl/libbio-scf-perl_1.03-6.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2097 (2.0K) [text/prs.lines.tag] Saving to: ‘libbio-scf-perl_1.03-6.dsc’ 0K .. 100% 88.6M=0s 2023-05-15 13:34:25 (88.6 MB/s) - ‘libbio-scf-perl_1.03-6.dsc’ saved [2097/2097] Mon May 15 13:34:25 UTC 2023 I: libbio-scf-perl_1.03-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbio-scf-perl Binary: libbio-scf-perl Architecture: any Version: 1.03-6 Maintainer: Debian Perl Group Uploaders: Charles Plessy Homepage: https://metacpan.org/release/Bio-SCF Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/perl-team/modules/packages/libbio-scf-perl Vcs-Git: https://salsa.debian.org/perl-team/modules/packages/libbio-scf-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 13), libstaden-read-dev, perl-xs-dev, perl:native, zlib1g-dev Package-List: libbio-scf-perl deb perl optional arch=any Checksums-Sha1: f14e50d13db69d0518606e18f5ac63da12cc7fe2 96549 libbio-scf-perl_1.03.orig.tar.gz 643d91c7b62a8953aaf81524f5d74d35d7db9f4a 7196 libbio-scf-perl_1.03-6.debian.tar.xz Checksums-Sha256: 519203098d7d5cf9aae32f65c52223d38b9c0dfbbfaeda10c1ea74ecd1d6295c 96549 libbio-scf-perl_1.03.orig.tar.gz 6467595f89abca6709bdc54292b8afadf6907bfe52444fc822885f3494749755 7196 libbio-scf-perl_1.03-6.debian.tar.xz Files: 8f5fcf889c958732a0bc1743a9c97fcc 96549 libbio-scf-perl_1.03.orig.tar.gz aa30f92c2646c20c40f2f8f5084a7e0c 7196 libbio-scf-perl_1.03-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEsjhixBXWVlpOhsvXV5wWDUyeI+gFAmNIJ88ACgkQV5wWDUye I+jXBQ/+O60yDoz6bJKKgkTfVaqC92tne6CKP+U5YnkTWsOmBMBcqSsmTaNgQQc4 rGQre2QpDA0aSiS4mfGIAgVmbiBWG63JfkZJqlTPimDGqze/K1js2X6e3YWa2pVU KJAOROKCaXMTTDbyim5vsQe0FoBEIqgKfWR6oricZ6NWLMY33AINzPEGYxTTXG7g jmKo2WR7mOeCxMUz0vn0XLGsbDkiH1t8HJHPldFPQmgu7iSJIgnrYzfI6No2OKUz mc8Ve7uy1wZ9xDCMRq3LaUeF1Jk6ITEDHfN3yB1pBWW/K4bv52cd6csDE2WqHHOJ inDbOf5kTFUHPlBytiOlljnVYFye8cOYZduAKB2lUaNwTGVJgWOM0C8q1atcZ1rp VPyf8NkdArQOuo80XW+BTsJVIYFV/A51g479VIuVNJuhpb9UdxgKwyXa1ye2pYRu zwa05/z8k3eCW80rlC1KEdbIhIZpa0+/Hzpo5TXNtrwiNbp0uZaB1EwSr+g9A9O7 ohGt6uXaavEpg2wsW7CSwnJDIfkZsIdUZYCoZZSSTpB6LyQXlQXArgU15Yhw1H/E M85pho08GFfSLKcecPrhhnZzl6mbACm3VFU/E5IvDwQzY9zsPpiMVEdqNaje1ZA8 gW/YIVyUOuxx7DzWi+D5025h7V94D/1mWHAa040lLE5RGL6lU2U= =e1GQ -----END PGP SIGNATURE----- Mon May 15 13:34:25 UTC 2023 I: Checking whether the package is not for us Mon May 15 13:34:25 UTC 2023 I: Starting 1st build on remote node codethink15-arm64.debian.net. Mon May 15 13:34:25 UTC 2023 I: Preparing to do remote build '1' on codethink15-arm64.debian.net. Mon May 15 13:35:12 UTC 2023 I: Deleting $TMPDIR on codethink15-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jun 16 07:57:27 -12 2024 I: pbuilder-time-stamp: 1718567847 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-scf-perl_1.03-6.dsc] I: copying [./libbio-scf-perl_1.03.orig.tar.gz] I: copying [./libbio-scf-perl_1.03-6.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Oct 13 02:59:27 2022 -12 gpgv: using RSA key B23862C415D6565A4E86CBD7579C160D4C9E23E8 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-scf-perl_1.03-6.dsc: no acceptable signature found dpkg-source: info: extracting libbio-scf-perl in libbio-scf-perl-1.03 dpkg-source: info: unpacking libbio-scf-perl_1.03.orig.tar.gz dpkg-source: info: unpacking libbio-scf-perl_1.03-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying 0001-Fix-overflowing-casts-from-pointer-to-integer.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/23124/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='23124' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.kSJPCa9U/pbuilderrc_UMZa --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.kSJPCa9U/b1 --logfile b1/build.log libbio-scf-perl_1.03-6.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink15-arm64 4.15.0-210-generic #221-Ubuntu SMP Tue Apr 18 08:32:48 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 14 04:48 /bin -> usr/bin I: user script /srv/workspace/pbuilder/23124/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libstaden-read-dev, perl-xs-dev, perl:native, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libstaden-read-dev; however: Package libstaden-read-dev is not installed. pbuilder-satisfydepends-dummy depends on perl-xs-dev; however: Package perl-xs-dev is not installed. pbuilder-satisfydepends-dummy depends on perl:native. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libbz2-dev{a} libcurl3-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libhtscodecs-dev{a} libhtscodecs2{a} libicu72{a} libldap-2.5-0{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libperl-dev{a} libpipeline1{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libstaden-read-dev{a} libstaden-read14{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 25.7 MB of archives. After unpacking 93.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 libbz2-dev arm64 1.0.8-5+b1 [31.5 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 libcurl3-gnutls arm64 7.88.1-9 [357 kB] Get: 41 http://deb.debian.org/debian bookworm/main arm64 libcurl4-gnutls-dev arm64 7.88.1-9 [466 kB] Get: 42 http://deb.debian.org/debian bookworm/main arm64 libhtscodecs2 arm64 1.3.0-4 [70.5 kB] Get: 43 http://deb.debian.org/debian bookworm/main arm64 libhtscodecs-dev arm64 1.3.0-4 [2850 kB] Get: 44 http://deb.debian.org/debian bookworm/main arm64 liblzma-dev arm64 5.4.1-0.2 [255 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 libperl-dev arm64 5.36.0-7 [957 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 libstaden-read14 arm64 1.14.15-1 [247 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1 [913 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 libstaden-read-dev arm64 1.14.15-1 [331 kB] Fetched 25.7 MB in 1s (25.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../02-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../22-libelf1_0.188-2.1_arm64.deb ... Unpacking libelf1:arm64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_arm64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../30-libbrotli1_1.0.9-2+b6_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b6) ... Selecting previously unselected package libbz2-dev:arm64. Preparing to unpack .../31-libbz2-dev_1.0.8-5+b1_arm64.deb ... Unpacking libbz2-dev:arm64 (1.0.8-5+b1) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../32-libsasl2-modules-db_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../33-libsasl2-2_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../34-libldap-2.5-0_2.5.13+dfsg-5_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../35-libnghttp2-14_1.52.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.52.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../36-libpsl5_0.21.2-1_arm64.deb ... Unpacking libpsl5:arm64 (0.21.2-1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../37-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../38-libssh2-1_1.10.0-3+b1_arm64.deb ... Unpacking libssh2-1:arm64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl3-gnutls:arm64. 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Selecting previously unselected package libstaden-read14:arm64. Preparing to unpack .../45-libstaden-read14_1.14.15-1_arm64.deb ... Unpacking libstaden-read14:arm64 (1.14.15-1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../46-zlib1g-dev_1%3a1.2.13.dfsg-1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.13.dfsg-1) ... Selecting previously unselected package libstaden-read-dev. Preparing to unpack .../47-libstaden-read-dev_1.14.15-1_arm64.deb ... Unpacking libstaden-read-dev (1.14.15-1) ... Setting up libhtscodecs2:arm64 (1.3.0-4) ... Setting up libpipeline1:arm64 (1.5.7-1) ... Setting up libpsl5:arm64 (0.21.2-1) ... Setting up libicu72:arm64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b6) ... Setting up libnghttp2-14:arm64 (1.52.0-1) ... Setting up libmagic1:arm64 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up libperl-dev:arm64 (5.36.0-7) ... Setting up file (1:5.44-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Setting up libhtscodecs-dev:arm64 (1.3.0-4) ... Setting up autotools-dev (20220109.1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up autopoint (0.21-12) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg-10) ... Setting up autoconf (2.71-3) ... Setting up liblzma-dev:arm64 (5.4.1-0.2) ... Setting up zlib1g-dev:arm64 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:arm64 (1.10.0-3+b1) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.2) ... Setting up libbz2-dev:arm64 (1.0.8-5+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3-gnutls:arm64 (7.88.1-9) ... Setting up libcurl4-gnutls-dev:arm64 (7.88.1-9) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libstaden-read14:arm64 (1.14.15-1) ... Setting up libstaden-read-dev (1.14.15-1) ... Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/libbio-scf-perl-1.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-scf-perl_1.03-6_source.changes dpkg-buildpackage: info: source package libbio-scf-perl dpkg-buildpackage: info: source version 1.03-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Jelmer Vernooij dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -ffile-prefix-map=/build/libbio-scf-perl-1.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/libbio-scf-perl-1.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::SCF Writing MYMETA.yml and MYMETA.json dh_auto_build make -j8 make[1]: Entering directory '/build/libbio-scf-perl-1.03' Running Mkbootstrap for SCF () "/usr/bin/perl" "/usr/share/perl/5.36/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.36/ExtUtils/typemap' SCF.xs > SCF.xsc chmod 644 "SCF.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- SCF.bs blib/arch/auto/Bio/SCF/SCF.bs 644 cp SCF/Arrays.pm blib/lib/Bio/SCF/Arrays.pm cp SCF.pm blib/lib/Bio/SCF.pm Please specify prototyping behavior for SCF.xs (see perlxs manual) mv SCF.xsc SCF.c aarch64-linux-gnu-gcc -c -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -ffile-prefix-map=/build/libbio-scf-perl-1.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"1.03\" -DXS_VERSION=\"1.03\" -fPIC "-I/usr/lib/aarch64-linux-gnu/perl/5.36/CORE" -DLITTLE_ENDIAN SCF.c rm -f blib/arch/auto/Bio/SCF/SCF.so aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/libbio-scf-perl-1.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -shared -L/usr/local/lib -fstack-protector-strong SCF.o -o blib/arch/auto/Bio/SCF/SCF.so \ -lstaden-read -lz \ chmod 755 blib/arch/auto/Bio/SCF/SCF.so Manifying 1 pod document make[1]: Leaving directory '/build/libbio-scf-perl-1.03' dh_auto_test make -j8 test TEST_VERBOSE=1 make[1]: Entering directory '/build/libbio-scf-perl-1.03' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- SCF.bs blib/arch/auto/Bio/SCF/SCF.bs 644 PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/scf.t .. 1..18 # Running under perl version 5.036000 for linux # Current time local: Sun Jun 16 07:58:00 2024 # Current time GMT: Sun Jun 16 19:58:00 2024 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok All tests successful. Files=1, Tests=18, 0 wallclock secs ( 0.06 usr 0.00 sys + 0.28 cusr 0.03 csys = 0.37 CPU) Result: PASS make[1]: Leaving directory '/build/libbio-scf-perl-1.03' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbio-scf-perl/ make -j8 install DESTDIR=/build/libbio-scf-perl-1.03/debian/libbio-scf-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/libbio-scf-perl-1.03' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- SCF.bs blib/arch/auto/Bio/SCF/SCF.bs 644 Manifying 1 pod document Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /build/libbio-scf-perl-1.03/debian/libbio-scf-perl/usr/lib/aarch64-linux-gnu/perl5/5.36/auto/Bio/SCF/SCF.so Installing /build/libbio-scf-perl-1.03/debian/libbio-scf-perl/usr/lib/aarch64-linux-gnu/perl5/5.36/Bio/SCF.pm Installing /build/libbio-scf-perl-1.03/debian/libbio-scf-perl/usr/lib/aarch64-linux-gnu/perl5/5.36/Bio/SCF/Arrays.pm Installing /build/libbio-scf-perl-1.03/debian/libbio-scf-perl/usr/share/man/man3/Bio::SCF.3pm make[1]: Leaving directory '/build/libbio-scf-perl-1.03' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-scf-perl' in '../libbio-scf-perl_1.03-6_arm64.deb'. dpkg-deb: building package 'libbio-scf-perl-dbgsym' in '../libbio-scf-perl-dbgsym_1.03-6_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libbio-scf-perl_1.03-6_arm64.buildinfo dpkg-genchanges --build=binary -O../libbio-scf-perl_1.03-6_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/23124 and its subdirectories I: Current time: Sun Jun 16 07:58:10 -12 2024 I: pbuilder-time-stamp: 1718567890 Mon May 15 13:35:13 UTC 2023 I: 1st build successful. Starting 2nd build on remote node codethink12-arm64.debian.net. Mon May 15 13:35:13 UTC 2023 I: Preparing to do remote build '2' on codethink12-arm64.debian.net. Mon May 15 13:36:16 UTC 2023 I: Deleting $TMPDIR on codethink12-arm64.debian.net. Mon May 15 13:36:16 UTC 2023 I: libbio-scf-perl_1.03-6_arm64.changes: Format: 1.8 Date: Thu, 13 Oct 2022 15:58:57 +0100 Source: libbio-scf-perl Binary: libbio-scf-perl libbio-scf-perl-dbgsym Architecture: arm64 Version: 1.03-6 Distribution: unstable Urgency: medium Maintainer: Debian Perl Group Changed-By: Jelmer Vernooij Description: libbio-scf-perl - Perl extension for reading and writing SCF sequence files Changes: libbio-scf-perl (1.03-6) unstable; urgency=medium . [ Debian Janitor ] * Update standards version to 4.5.1, no changes needed. * Update standards version to 4.6.0, no changes needed. * Apply multi-arch hints. + libbio-scf-perl: Drop Multi-Arch: same. Checksums-Sha1: 5592e57c1f9580a956244d31eebaeceb31dfdce0 33376 libbio-scf-perl-dbgsym_1.03-6_arm64.deb 2cf4583ca9da163a334da741bd03422bfc52fbe5 5933 libbio-scf-perl_1.03-6_arm64.buildinfo 8dcd29cbc3d17524646690c8dca2166f5b9edc9a 19968 libbio-scf-perl_1.03-6_arm64.deb Checksums-Sha256: 04c595711bf8d51ae70066d53997b33beebdc8fb08d9f0f62a3f03828079b14c 33376 libbio-scf-perl-dbgsym_1.03-6_arm64.deb 5fa3a07f407a060c1854816a67a6804b991ea762825b6d57a19ed4a0771ebcd2 5933 libbio-scf-perl_1.03-6_arm64.buildinfo e7cafd236a4f40eaac056eb185e59cbeede3f2ddde412e72a8031788c8311d6e 19968 libbio-scf-perl_1.03-6_arm64.deb Files: 0a0853d3bdc9dbf33e61517297e2a181 33376 debug optional libbio-scf-perl-dbgsym_1.03-6_arm64.deb bad885c715bd248609cc5250c6a06036 5933 perl optional libbio-scf-perl_1.03-6_arm64.buildinfo cf9c389d00631561ec955876dcf2584f 19968 perl optional libbio-scf-perl_1.03-6_arm64.deb Mon May 15 13:36:18 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.kSJPCa9U/libbio-scf-perl_1.03-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.kSJPCa9U/libbio-scf-perl_1.03-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.kSJPCa9U/libbio-scf-perl_1.03-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.kSJPCa9U/b1/libbio-scf-perl_1.03-6_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.kSJPCa9U/b2/libbio-scf-perl_1.03-6_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.603s) 0.603s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.020s) 0.020s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon May 15 13:36:20 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Mon May 15 13:36:20 UTC 2023 I: libbio-scf-perl from bookworm built successfully and reproducibly on arm64. Mon May 15 13:36:23 UTC 2023 I: Submitting .buildinfo files to external archives: Mon May 15 13:36:23 UTC 2023 I: Submitting 8.0K b1/libbio-scf-perl_1.03-6_arm64.buildinfo.asc Mon May 15 13:36:23 UTC 2023 I: Submitting 8.0K b2/libbio-scf-perl_1.03-6_arm64.buildinfo.asc Mon May 15 13:36:24 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 15 13:36:24 UTC 2023 I: Done submitting .buildinfo files. Mon May 15 13:36:24 UTC 2023 I: Removing signed libbio-scf-perl_1.03-6_arm64.buildinfo.asc files: removed './b1/libbio-scf-perl_1.03-6_arm64.buildinfo.asc' removed './b2/libbio-scf-perl_1.03-6_arm64.buildinfo.asc'