Mon May 8 22:18:58 UTC 2023 I: starting to build paraclu/bookworm/armhf on jenkins on '2023-05-08 22:18' Mon May 8 22:18:58 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_20/5820/console.log Mon May 8 22:18:58 UTC 2023 I: Downloading source for bookworm/paraclu=10-1 --2023-05-08 22:18:59-- http://cdn-fastly.deb.debian.org/debian/pool/main/p/paraclu/paraclu_10-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1930 (1.9K) [text/prs.lines.tag] Saving to: ‘paraclu_10-1.dsc’ 0K . 100% 220M=0s 2023-05-08 22:18:59 (220 MB/s) - ‘paraclu_10-1.dsc’ saved [1930/1930] Mon May 8 22:18:59 UTC 2023 I: paraclu_10-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: paraclu Binary: paraclu Architecture: any Version: 10-1 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy Homepage: https://gitlab.com/mcfrith/paraclu Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/paraclu Vcs-Git: https://salsa.debian.org/med-team/paraclu.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: paraclu deb science optional arch=any Checksums-Sha1: ce778c740040bc3190b564201fb656b0e41d3c79 24819 paraclu_10.orig.tar.gz d23aa332116376f9a3a4b51ffb95c1347ca85273 4736 paraclu_10-1.debian.tar.xz Checksums-Sha256: 20c529f2b33992fed4b25052a2881acc92cfcae8e50d2e9ba8365b73770611c2 24819 paraclu_10.orig.tar.gz 76d66b09897dcbb3821cd2d335f8cb89e99d401d34fb622aecd6d2d4cc8988d4 4736 paraclu_10-1.debian.tar.xz Files: 04367fbb65032d883e6159e38ffedf87 24819 paraclu_10.orig.tar.gz 44a3a113414035966c2be3ad564ce4d1 4736 paraclu_10-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmEZUW0UHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafGTPRAAoxeDkfLsiuJaGjzCf+E119/M9ktn y191oEISwK96ahBCGeIC7+TNabx1p3da8r/9Y2pp7axkbbO5/KDaxOlaSVk7Zx0D PnHaGPJEXUZVadohJIiTcpvoUoFIk2zFzLm8ASvq4Qe5iuOgREE/GWFSAUd6KVnV wgB8yfyqXzAw1BzvFI4wXm0d+94AuCqaCu7tCWd+tAlOkrzfFNtmjDysfhtYHCXW ZUeunsPCC4KqcZDm04wOJ2ga3MmDQCJyXN7TayZTqlBImgoIm+Gsd3V+VBVZafuc TyOvh+PNcSNwigK0GLHIyMbUz63IuorjvL+NcWd69lJ+PYNr7hrCIRz/D7Uf0Ozi crlvazRtS3TXlVPIVWgRpIoglvdy0M95Yr0cvFSSZh6Ypu1d+CgvExgRZRNDxO2F w9ebP9d5H52z6lci3UDC5zWcWv/QnjxBBY0FjU2OmG8fOpArm8bLnAKQ20lQUTHH wPKmdetFTbKK1VZRN5DjPLLDJj88LkQ5eiVKHZe1hsPBJamTOY8gWGzwpFgYebjC vcBJ9wvtT/p66ROn1UG594Vvu+OvWO8HCiS7LjfJ8OfmKymLvMNrKXac6+hiV4o2 xyLs1LutJTRHr8lQB9jrlHkxOlFYsn2Y5sujw8Ujqhtqsk4PveL5m0HgWWATQV/n ZZwChBij5Ggi1Ng= =CjyE -----END PGP SIGNATURE----- Mon May 8 22:18:59 UTC 2023 I: Checking whether the package is not for us Mon May 8 22:18:59 UTC 2023 I: Starting 1st build on remote node cbxi4a-armhf-rb.debian.net. Mon May 8 22:18:59 UTC 2023 I: Preparing to do remote build '1' on cbxi4a-armhf-rb.debian.net. Mon May 8 22:28:52 UTC 2023 I: Deleting $TMPDIR on cbxi4a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon May 8 10:19:28 -12 2023 I: pbuilder-time-stamp: 1683584368 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [paraclu_10-1.dsc] I: copying [./paraclu_10.orig.tar.gz] I: copying [./paraclu_10-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Aug 15 05:39:57 2021 -12 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./paraclu_10-1.dsc: no acceptable signature found dpkg-source: info: extracting paraclu in paraclu-10 dpkg-source: info: unpacking paraclu_10.orig.tar.gz dpkg-source: info: unpacking paraclu_10-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying do-not-override-cxxflags.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/26788/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='db4bb8b9b63e4062ace402a9f1e9fcbb' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='26788' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4F272ipF/pbuilderrc_tkK0 --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4F272ipF/b1 --logfile b1/build.log paraclu_10-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux cbxi4a 5.10.0-22-armmp #1 SMP Debian 5.10.178-3 (2023-04-22) armv7l GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash -rwxr-xr-x 1 root root 133220 Sep 20 2022 date -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd -rwxr-xr-x 1 root root 68104 Sep 20 2022 df -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 67548 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch -rwxr-xr-x 1 root root 67548 Sep 20 2022 true -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/26788/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.0 MB of archives. After unpacking 67.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 11 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Fetched 18.0 MB in 4s (5051 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_armhf.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../02-libmagic1_1%3a5.44-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_armhf.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_armhf.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_armhf.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_armhf.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_armhf.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_armhf.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../22-libelf1_0.188-2.1_armhf.deb ... Unpacking libelf1:armhf (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_armhf.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-3_armhf.deb ... Unpacking libicu72:armhf (72.1-3) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_armhf.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Setting up libpipeline1:armhf (1.5.7-1) ... Setting up libicu72:armhf (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libmagic1:armhf (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libelf1:armhf (0.188-2.1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/paraclu-10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../paraclu_10-1_source.changes dpkg-buildpackage: info: source package paraclu dpkg-buildpackage: info: source version 10-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/paraclu-10' rm -f paraclu make[1]: Leaving directory '/build/paraclu-10' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/paraclu.substvars debian/files rm -fr -- debian/paraclu/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/paraclu-10' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/paraclu-10=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o paraclu paraclu.cc paraclu.cc: In function 'void weakestPrefix(Ci, Ci)': paraclu.cc:46:6: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 46 | void weakestPrefix(Ci beg, Ci end) { | ^~~~~~~~~~~~~ paraclu.cc:46:6: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 paraclu.cc: In function 'void weakestSuffix(Ci, Ci)': paraclu.cc:65:6: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 65 | void weakestSuffix(Ci beg, Ci end) { | ^~~~~~~~~~~~~ paraclu.cc:65:6: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 paraclu.cc: In function 'void writeClusters(Ci, Ci, double)': paraclu.cc:84:6: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 84 | void writeClusters(Ci beg, Ci end, double minDensity) { | ^~~~~~~~~~~~~ paraclu.cc:84:6: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 paraclu.cc:86:16: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 86 | weakestPrefix(beg, end); | ~~~~~~~~~~~~~^~~~~~~~~~ paraclu.cc:88:16: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 88 | weakestSuffix(beg, end); | ~~~~~~~~~~~~~^~~~~~~~~~ paraclu.cc:104:18: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 104 | writeClusters(beg, mid, newMinDensity); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ paraclu.cc:105:18: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 105 | writeClusters(mid, end, newMinDensity); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/vector:70, from paraclu.cc:18: /usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {Site}; _Tp = Site; _Alloc = std::allocator]': /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {Site}; _Tp = Site; _Alloc = std::allocator]': /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ paraclu.cc: In function 'void processOneStream(std::istream&)': paraclu.cc:123:20: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 123 | writeClusters(sites.begin(), sites.end(), -infinity); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ paraclu.cc:131:16: note: parameter passing for argument of type 'Ci' {aka 'std::vector::const_iterator'} changed in GCC 7.1 131 | writeClusters(sites.begin(), sites.end(), -infinity); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/build/paraclu-10' dh_auto_test rm -fr -- /tmp/dh-xdg-rundir-HDSoKvsl create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/paraclu.substvars rm -fr -- debian/.debhelper/generated/paraclu/ debian/paraclu/ debian/tmp/ dh_auto_install --destdir=debian/paraclu/ install -m0755 -d /build/paraclu-10/debian/paraclu dh_install install -m0755 -d debian/paraclu//usr/bin cp --reflink=auto -a ./paraclu ./paraclu-cut.sh debian/paraclu//usr/bin/ dh_installdocs install -m0755 -d debian/paraclu/usr/share/doc/paraclu install -m0755 -d debian/paraclu/usr/share/doc/paraclu cp --reflink=auto -a ./README.txt debian/paraclu/usr/share/doc/paraclu cp --reflink=auto -a ./debian/README.test debian/paraclu/usr/share/doc/paraclu cp --reflink=auto -a ./debian/tests/run-unit-test debian/paraclu/usr/share/doc/paraclu chmod -R u\+rw,go=rX debian/paraclu/usr/share/doc install -p -m0644 debian/copyright debian/paraclu/usr/share/doc/paraclu/copyright dh_installchangelogs install -m0755 -d debian/paraclu/usr/share/doc/paraclu install -p -m0644 debian/.debhelper/generated/paraclu/dh_installchangelogs.dch.trimmed debian/paraclu/usr/share/doc/paraclu/changelog.Debian dh_installexamples install -m0755 -d debian/paraclu/usr/share/doc/paraclu/examples cp --reflink=auto -a ./debian/tests/data/input.fa debian/paraclu/usr/share/doc/paraclu/examples debian/rules override_dh_installman make[1]: Entering directory '/build/paraclu-10' # dh_installman is messing up .sh extension as language extension dh_install debian/*.1 usr/share/man/man1 install -m0755 -d debian/paraclu//usr/bin cp --reflink=auto -a ./paraclu ./paraclu-cut.sh debian/paraclu//usr/bin/ install -m0755 -d debian/paraclu/usr/share/man/man1 cp --reflink=auto -a ./debian/paraclu-cut.sh.1 debian/paraclu/usr/share/man/man1/ make[1]: Leaving directory '/build/paraclu-10' dh_lintian install -m0755 -d debian/paraclu/usr/share/lintian/overrides install -p -m0644 debian/lintian-overrides debian/paraclu/usr/share/lintian/overrides/paraclu dh_perl dh_link dh_strip_nondeterminism dh_compress cd debian/paraclu chmod a-x usr/share/doc/paraclu/README.txt usr/share/doc/paraclu/changelog.Debian usr/share/man/man1/paraclu-cut.sh.1 gzip -9nf usr/share/doc/paraclu/README.txt usr/share/doc/paraclu/changelog.Debian usr/share/man/man1/paraclu-cut.sh.1 cd '/build/paraclu-10' dh_fixperms find debian/paraclu ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/paraclu/usr/share/doc -type f -a -true -a ! -regex 'debian/paraclu/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/paraclu/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/paraclu/usr/share/man debian/paraclu/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/paraclu -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/paraclu/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a dwz -- debian/paraclu/usr/bin/paraclu dh_strip -a install -m0755 -d debian/.debhelper/paraclu/dbgsym-root/usr/lib/debug/.build-id/cd objcopy --only-keep-debug --compress-debug-sections debian/paraclu/usr/bin/paraclu debian/.debhelper/paraclu/dbgsym-root/usr/lib/debug/.build-id/cd/d701eed76dcd7be5782baf9140895502109149.debug chmod 0644 -- debian/.debhelper/paraclu/dbgsym-root/usr/lib/debug/.build-id/cd/d701eed76dcd7be5782baf9140895502109149.debug strip --remove-section=.comment --remove-section=.note debian/paraclu/usr/bin/paraclu objcopy --add-gnu-debuglink debian/.debhelper/paraclu/dbgsym-root/usr/lib/debug/.build-id/cd/d701eed76dcd7be5782baf9140895502109149.debug debian/paraclu/usr/bin/paraclu install -m0755 -d debian/.debhelper/paraclu/dbgsym-root/usr/share/doc ln -s paraclu debian/.debhelper/paraclu/dbgsym-root/usr/share/doc/paraclu-dbgsym install -m0755 -d debian/.debhelper/paraclu dh_makeshlibs -a rm -f debian/paraclu/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/paraclu/DEBIAN dpkg-shlibdeps -Tdebian/paraclu.substvars debian/paraclu/usr/bin/paraclu dpkg-shlibdeps: warning: debian/paraclu/usr/bin/paraclu contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb install -m0755 -d debian/paraclu/DEBIAN dh_gencontrol install -m0755 -d debian/paraclu/DEBIAN echo misc:Depends= >> debian/paraclu.substvars echo misc:Pre-Depends= >> debian/paraclu.substvars install -m0755 -d debian/.debhelper/paraclu/dbgsym-root/DEBIAN dpkg-gencontrol -pparaclu -ldebian/changelog -Tdebian/paraclu.substvars -Pdebian/.debhelper/paraclu/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=paraclu-dbgsym "-DDepends=paraclu (= \${binary:Version})" "-DDescription=debug symbols for paraclu" -DBuild-Ids=cdd701eed76dcd7be5782baf9140895502109149 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/paraclu/dbgsym-root/DEBIAN/control dpkg-gencontrol -pparaclu -ldebian/changelog -Tdebian/paraclu.substvars -Pdebian/paraclu chmod 0644 -- debian/paraclu/DEBIAN/control dh_md5sums install -m0755 -d debian/paraclu/DEBIAN cd debian/paraclu >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/paraclu/DEBIAN/md5sums install -m0755 -d debian/.debhelper/paraclu/dbgsym-root/DEBIAN cd debian/.debhelper/paraclu/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/paraclu/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/paraclu .. dpkg-deb --root-owner-group --build debian/.debhelper/paraclu/dbgsym-root .. dpkg-deb: building package 'paraclu' in '../paraclu_10-1_armhf.deb'. dpkg-deb: building package 'paraclu-dbgsym' in '../paraclu-dbgsym_10-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../paraclu_10-1_armhf.buildinfo dpkg-genchanges --build=binary -O../paraclu_10-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/26788 and its subdirectories I: Current time: Mon May 8 10:28:47 -12 2023 I: pbuilder-time-stamp: 1683584927 Mon May 8 22:28:54 UTC 2023 I: 1st build successful. Starting 2nd build on remote node jtx1b-armhf-rb.debian.net. Mon May 8 22:28:54 UTC 2023 I: Preparing to do remote build '2' on jtx1b-armhf-rb.debian.net. Mon May 8 22:30:07 UTC 2023 I: Deleting $TMPDIR on jtx1b-armhf-rb.debian.net. Mon May 8 22:30:09 UTC 2023 I: paraclu_10-1_armhf.changes: Format: 1.8 Date: Sun, 15 Aug 2021 23:07:40 +0530 Source: paraclu Binary: paraclu paraclu-dbgsym Architecture: armhf Version: 10-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: paraclu - Parametric clustering of genomic and transcriptomic features Changes: paraclu (10-1) unstable; urgency=medium . [ Nilesh Patra ] * Team Upload. * Fix fetch URL - paraclu has moved to gitlab * New upstream version 10 * d/control: Fix homepage * Remove lintian override * d/copyright: Fix Source URL, migrate to https * Update upstream/metadata * d/p/do-not-override-cxxflags.patch: Do not override CXXFLAGS * Declare compliance with policy 4.5.1 . [ Shruti Sridhar ] * Team Upload. * Add Autopkgtests * Add test data and examples * Install docs * Update copyright Checksums-Sha1: d768521f0a6a8b553011a2bdb689fe93587a14ce 58912 paraclu-dbgsym_10-1_armhf.deb 307dd59ea86c68b82e0a01222955d4fc4e74dcbe 4930 paraclu_10-1_armhf.buildinfo 1f8281cba7cbc6409d20da29dedece16a07e8d8d 13004 paraclu_10-1_armhf.deb Checksums-Sha256: ea9a3b466945dcf1b9bc96955d1b044744cd4c920abef993146176841bb1f672 58912 paraclu-dbgsym_10-1_armhf.deb 9657e837dead4383a432889b7b71d956433a49eb62801cf0a43f8501a2ed58b3 4930 paraclu_10-1_armhf.buildinfo b769d3afe096228a0c1293d9a1bf79bc4b7ef58eedead0eddf6db8fddb141b5e 13004 paraclu_10-1_armhf.deb Files: 04ad1a1816fb11711fe3bde1fd3a7022 58912 debug optional paraclu-dbgsym_10-1_armhf.deb 3104a8499b8026ffd8488eed16397884 4930 science optional paraclu_10-1_armhf.buildinfo ef19924175ce5520e92a700962641903 13004 science optional paraclu_10-1_armhf.deb Mon May 8 22:30:11 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.4F272ipF/paraclu_10-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.4F272ipF/paraclu_10-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.4F272ipF/paraclu_10-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.4F272ipF/b1/paraclu_10-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.4F272ipF/b2/paraclu_10-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.342s) 0.341s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon May 8 22:32:01 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Mon May 8 22:32:01 UTC 2023 I: paraclu from bookworm built successfully and reproducibly on armhf. Mon May 8 22:32:06 UTC 2023 I: Submitting .buildinfo files to external archives: Mon May 8 22:32:06 UTC 2023 I: Submitting 8.0K b1/paraclu_10-1_armhf.buildinfo.asc Mon May 8 22:32:08 UTC 2023 I: Submitting 8.0K b2/paraclu_10-1_armhf.buildinfo.asc Mon May 8 22:32:12 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 8 22:32:12 UTC 2023 I: Done submitting .buildinfo files. Mon May 8 22:32:12 UTC 2023 I: Removing signed paraclu_10-1_armhf.buildinfo.asc files: removed './b1/paraclu_10-1_armhf.buildinfo.asc' removed './b2/paraclu_10-1_armhf.buildinfo.asc'