Sat Jun 3 05:57:18 UTC 2023 I: starting to build freecontact/bookworm/i386 on jenkins on '2023-06-03 05:57' Sat Jun 3 05:57:18 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_8/258/console.log Sat Jun 3 05:57:18 UTC 2023 I: Downloading source for bookworm/freecontact=1.0.21-13 --2023-06-03 05:57:18-- http://cdn-fastly.deb.debian.org/debian/pool/main/f/freecontact/freecontact_1.0.21-13.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2409 (2.4K) [text/prs.lines.tag] Saving to: ‘freecontact_1.0.21-13.dsc’ 0K .. 100% 174M=0s 2023-06-03 05:57:18 (174 MB/s) - ‘freecontact_1.0.21-13.dsc’ saved [2409/2409] Sat Jun 3 05:57:18 UTC 2023 I: freecontact_1.0.21-13.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: freecontact Binary: freecontact, libfreecontact0v5, libfreecontact-dev, libfreecontact-doc Architecture: any all Version: 1.0.21-13 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://rostlab.org/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/freecontact Vcs-Git: https://salsa.debian.org/med-team/freecontact.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), bash-completion, d-shlibs, gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx Build-Depends-Indep: doxygen Package-List: freecontact deb science optional arch=any libfreecontact-dev deb libdevel optional arch=any libfreecontact-doc deb doc optional arch=all libfreecontact0v5 deb libs optional arch=any Checksums-Sha1: 8e7170af9fe5319b896f5e334557e1d338d71264 410600 freecontact_1.0.21.orig.tar.xz f465ed9cde6d23ee3eb950fb718489f0afd4a27a 8644 freecontact_1.0.21-13.debian.tar.xz Checksums-Sha256: 513c503ace70abc3cbc12d1aff616ffd9b6564a73a584efd7435b804479bd2a8 410600 freecontact_1.0.21.orig.tar.xz 33e47aea6f9621addf5d16685fa9b61984beae1df0e742e425fd414166d6639b 8644 freecontact_1.0.21-13.debian.tar.xz Files: 3de56e35cadfb20990801f2557168262 410600 freecontact_1.0.21.orig.tar.xz eab607cf0e00fbdd26232c3a4e29ca45 8644 freecontact_1.0.21-13.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmRl+iAUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdpMAxAAjsZRFEpqozG7hdblpRUpVOFvHr0L YOlvVFLzFyIgF74F7+afKVSoVYJFlvQG1sOp81MLP1LEc6K+SKXy70NmJKqfBeSr +rBUn2ta9Z5vfdGszs1VJAPgwK8UTQa2zzpmskQW7SZFKJy8MWdWrLsi3inVk7N/ mcFgA8Dxen8ajmSJB5JjGuFwcqXdNBDGPjMrW/0X3aYjG4pQqqxJt9Ru0S5RbCc2 qin1SfyNKYBx73bJ4e11N/VaTMn3Eq9DJEm1e/nEygErLKJHSyVLqWhjnbEwb9rk /cgGdiXgrhRLinv4/BpJQtVMqrJ1sJW3lrVBUp4ph8TU7ftitLpOTyFZc510fygm iKTcQQTx4RHzCQamqgPvr6wnfVjqGmLw0y9vz7GELCji79ML4fK5F31wWl32pgTG B7UKBL4NZTimrXhwMKtd+FTPnN8iRPMmnESRSMKE32q8vpXLedI/0ebov2QZbnzF FbEsFRDh/Qnluj4h1IfR9mQBCbZRT1KF42ZfO8ku9g5z9EKsCN7hy4qgPSJOZAf+ NfoaJ11pIysH/BZCqjC48O5rHD342pbIwIATlk+CKbuop/YohbxWzmkJZaLpG3GR g+e7eXSsSl3UPXpBk0WdsvtA6oHRseGUMqHJck+jlZWBoKJaey7JGy3oetsVHvED 002ZD5Uzof827c4= =8o5J -----END PGP SIGNATURE----- Sat Jun 3 05:57:18 UTC 2023 I: Checking whether the package is not for us Sat Jun 3 05:57:18 UTC 2023 I: Starting 1st build on remote node ionos16-i386.debian.net. Sat Jun 3 05:57:18 UTC 2023 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Sat Jun 3 06:01:30 UTC 2023 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 5 00:20:19 -12 2024 I: pbuilder-time-stamp: 1720182019 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [freecontact_1.0.21-13.dsc] I: copying [./freecontact_1.0.21.orig.tar.xz] I: copying [./freecontact_1.0.21-13.debian.tar.xz] I: Extracting source gpgv: Signature made Wed May 17 22:12:48 2023 -12 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./freecontact_1.0.21-13.dsc: no acceptable signature found dpkg-source: info: extracting freecontact in freecontact-1.0.21 dpkg-source: info: unpacking freecontact_1.0.21.orig.tar.xz dpkg-source: info: unpacking freecontact_1.0.21-13.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying avoid_exception_specification.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/78256/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='fe54f15114104bc4a61e4f003ad77b3b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='78256' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.xDQDx8dm/pbuilderrc_BDsP --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.xDQDx8dm/b1 --logfile b1/build.log freecontact_1.0.21-13.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos16-i386 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 23 2023 bash -rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 20 2022 cat -rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 20 2022 chown -rwxr-xr-x 1 root root 162024 Sep 20 2022 cp -rwxr-xr-x 1 root root 136916 Jan 5 2023 dash -rwxr-xr-x 1 root root 137160 Sep 20 2022 date -rwxr-xr-x 1 root root 100364 Sep 20 2022 dd -rwxr-xr-x 1 root root 108940 Sep 20 2022 df -rwxr-xr-x 1 root root 162152 Sep 20 2022 dir -rwxr-xr-x 1 root root 87760 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 34664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 84272 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 30240 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 218680 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 19 2022 hostname -rwxr-xr-x 1 root root 75756 Sep 20 2022 ln -rwxr-xr-x 1 root root 55600 Mar 22 2023 login -rwxr-xr-x 1 root root 162152 Sep 20 2022 ls -rwxr-xr-x 1 root root 214568 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 22 2023 more -rwsr-xr-x 1 root root 58912 Mar 22 2023 mount -rwxr-xr-x 1 root root 13856 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 157932 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 20 2022 rm -rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 20 2022 stty -rwsr-xr-x 1 root root 83492 Mar 22 2023 su -rwxr-xr-x 1 root root 38792 Sep 20 2022 sync -rwxr-xr-x 1 root root 598456 Apr 6 2023 tar -rwxr-xr-x 1 root root 13860 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 20 2022 touch -rwxr-xr-x 1 root root 34664 Sep 20 2022 true -rwxr-xr-x 1 root root 17892 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 22 2023 umount -rwxr-xr-x 1 root root 38760 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/78256/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), bash-completion, d-shlibs, gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx, doxygen dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev | libblas-3.so; however: Package libblas-dev is not installed. Package libblas-3.so is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev | liblapack-3.so; however: Package liblapack-dev is not installed. Package liblapack-3.so is not installed. pbuilder-satisfydepends-dummy depends on libtool; however: Package libtool is not installed. pbuilder-satisfydepends-dummy depends on libxerces-c-dev; however: Package libxerces-c-dev is not installed. pbuilder-satisfydepends-dummy depends on xsdcxx; however: Package xsdcxx is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} bsdextrautils{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libclang-cpp14{a} libclang1-14{a} libcurl3-gnutls{a} libdebhelper-perl{a} libedit2{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libicu-dev{a} libicu72{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} libllvm14{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxerces-c-dev{a} libxerces-c3.2{a} libxml2{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} xsdcxx{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 66 newly installed, 0 to remove and 0 not upgraded. Need to get 123 MB of archives. After unpacking 638 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 bash-completion all 1:2.11-6 [234 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 d-shlibs all 0.104 [18.6 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 23 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 25 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 libbsd0 i386 0.11.7-2 [121 kB] Get: 34 http://deb.debian.org/debian bookworm/main i386 libedit2 i386 3.1-20221030-2 [97.2 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 libz3-4 i386 4.8.12-3.1 [7853 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libllvm14 i386 1:14.0.6-12 [25.0 MB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libclang-cpp14 i386 1:14.0.6-12 [12.7 MB] Get: 38 http://deb.debian.org/debian bookworm/main i386 libclang1-14 i386 1:14.0.6-12 [7086 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 doxygen i386 1.9.4-4 [4836 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB] Get: 41 http://deb.debian.org/debian bookworm/main i386 libgfortran-12-dev i386 12.2.0-14 [761 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 gfortran-12 i386 12.2.0-14 [10.5 MB] Get: 43 http://deb.debian.org/debian bookworm/main i386 gfortran i386 4:12.2.0-3 [1432 B] Get: 44 http://deb.debian.org/debian bookworm/main i386 icu-devtools i386 72.1-3 [214 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 libblas3 i386 3.11.0-2 [139 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 libblas-dev i386 3.11.0-2 [151 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 libboost1.74-dev i386 1.74.0+ds1-21 [9508 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 libboost-dev i386 1.74.0.3 [4548 B] Get: 49 http://deb.debian.org/debian bookworm/main i386 libboost-program-options1.74.0 i386 1.74.0+ds1-21 [338 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 libboost-program-options1.74-dev i386 1.74.0+ds1-21 [369 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 libboost-program-options-dev i386 1.74.0.3 [4344 B] Get: 52 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 53 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 54 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 55 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 56 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get: 57 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 58 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 59 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 60 http://deb.debian.org/debian bookworm/main i386 libcurl3-gnutls i386 7.88.1-10 [413 kB] Get: 61 http://deb.debian.org/debian bookworm/main i386 libicu-dev i386 72.1-3 [10.6 MB] Get: 62 http://deb.debian.org/debian bookworm/main i386 liblapack3 i386 3.11.0-2 [2092 kB] Get: 63 http://deb.debian.org/debian bookworm/main i386 liblapack-dev i386 3.11.0-2 [4187 kB] Get: 64 http://deb.debian.org/debian bookworm/main i386 libxerces-c3.2 i386 3.2.4+debian-1 [942 kB] Get: 65 http://deb.debian.org/debian bookworm/main i386 libxerces-c-dev i386 3.2.4+debian-1 [1769 kB] Get: 66 http://deb.debian.org/debian bookworm/main i386 xsdcxx i386 4.0.0-9 [1911 kB] Fetched 123 MB in 1s (84.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package bash-completion. Preparing to unpack .../01-bash-completion_1%3a2.11-6_all.deb ... Unpacking bash-completion (1:2.11-6) ... Selecting previously unselected package libmagic-mgc. 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Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../09-libpipeline1_1.5.7-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.11.2-2_i386.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-3_i386.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../16-d-shlibs_0.104_all.deb ... Unpacking d-shlibs (0.104) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../17-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../18-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../19-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../20-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../21-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../23-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../24-libelf1_0.188-2.1_i386.deb ... Unpacking libelf1:i386 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../25-dwz_0.15-1_i386.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../26-libicu72_72.1-3_i386.deb ... Unpacking libicu72:i386 (72.1-3) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../27-libxml2_2.9.14+dfsg-1.2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../28-gettext_0.21-12_i386.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../29-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../30-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../32-libbsd0_0.11.7-2_i386.deb ... Unpacking libbsd0:i386 (0.11.7-2) ... Selecting previously unselected package libedit2:i386. Preparing to unpack .../33-libedit2_3.1-20221030-2_i386.deb ... Unpacking libedit2:i386 (3.1-20221030-2) ... Selecting previously unselected package libz3-4:i386. Preparing to unpack .../34-libz3-4_4.8.12-3.1_i386.deb ... Unpacking libz3-4:i386 (4.8.12-3.1) ... Selecting previously unselected package libllvm14:i386. Preparing to unpack .../35-libllvm14_1%3a14.0.6-12_i386.deb ... Unpacking libllvm14:i386 (1:14.0.6-12) ... Selecting previously unselected package libclang-cpp14. Preparing to unpack .../36-libclang-cpp14_1%3a14.0.6-12_i386.deb ... Unpacking libclang-cpp14 (1:14.0.6-12) ... Selecting previously unselected package libclang1-14. Preparing to unpack .../37-libclang1-14_1%3a14.0.6-12_i386.deb ... Unpacking libclang1-14 (1:14.0.6-12) ... Selecting previously unselected package doxygen. Preparing to unpack .../38-doxygen_1.9.4-4_i386.deb ... Unpacking doxygen (1.9.4-4) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../39-libgfortran5_12.2.0-14_i386.deb ... Unpacking libgfortran5:i386 (12.2.0-14) ... 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Selecting previously unselected package libboost1.74-dev:i386. Preparing to unpack .../46-libboost1.74-dev_1.74.0+ds1-21_i386.deb ... Unpacking libboost1.74-dev:i386 (1.74.0+ds1-21) ... Selecting previously unselected package libboost-dev:i386. Preparing to unpack .../47-libboost-dev_1.74.0.3_i386.deb ... Unpacking libboost-dev:i386 (1.74.0.3) ... Selecting previously unselected package libboost-program-options1.74.0:i386. Preparing to unpack .../48-libboost-program-options1.74.0_1.74.0+ds1-21_i386.deb ... Unpacking libboost-program-options1.74.0:i386 (1.74.0+ds1-21) ... Selecting previously unselected package libboost-program-options1.74-dev:i386. Preparing to unpack .../49-libboost-program-options1.74-dev_1.74.0+ds1-21_i386.deb ... Unpacking libboost-program-options1.74-dev:i386 (1.74.0+ds1-21) ... Selecting previously unselected package libboost-program-options-dev:i386. Preparing to unpack .../50-libboost-program-options-dev_1.74.0.3_i386.deb ... Unpacking libboost-program-options-dev:i386 (1.74.0.3) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../51-libbrotli1_1.0.9-2+b6_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../52-libsasl2-modules-db_2.1.28+dfsg-10_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../53-libsasl2-2_2.1.28+dfsg-10_i386.deb ... Unpacking libsasl2-2:i386 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:i386. Preparing to unpack .../54-libldap-2.5-0_2.5.13+dfsg-5_i386.deb ... Unpacking libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../55-libnghttp2-14_1.52.0-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.52.0-1) ... Selecting previously unselected package libpsl5:i386. Preparing to unpack .../56-libpsl5_0.21.2-1_i386.deb ... Unpacking libpsl5:i386 (0.21.2-1) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../57-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:i386. Preparing to unpack .../58-libssh2-1_1.10.0-3+b1_i386.deb ... Unpacking libssh2-1:i386 (1.10.0-3+b1) ... Selecting previously unselected package libcurl3-gnutls:i386. Preparing to unpack .../59-libcurl3-gnutls_7.88.1-10_i386.deb ... Unpacking libcurl3-gnutls:i386 (7.88.1-10) ... Selecting previously unselected package libicu-dev:i386. Preparing to unpack .../60-libicu-dev_72.1-3_i386.deb ... Unpacking libicu-dev:i386 (72.1-3) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../61-liblapack3_3.11.0-2_i386.deb ... Unpacking liblapack3:i386 (3.11.0-2) ... Selecting previously unselected package liblapack-dev:i386. Preparing to unpack .../62-liblapack-dev_3.11.0-2_i386.deb ... Unpacking liblapack-dev:i386 (3.11.0-2) ... Selecting previously unselected package libxerces-c3.2:i386. Preparing to unpack .../63-libxerces-c3.2_3.2.4+debian-1_i386.deb ... Unpacking libxerces-c3.2:i386 (3.2.4+debian-1) ... Selecting previously unselected package libxerces-c-dev:i386. Preparing to unpack .../64-libxerces-c-dev_3.2.4+debian-1_i386.deb ... Unpacking libxerces-c-dev:i386 (3.2.4+debian-1) ... Selecting previously unselected package xsdcxx. Preparing to unpack .../65-xsdcxx_4.0.0-9_i386.deb ... Unpacking xsdcxx (4.0.0-9) ... Setting up libpipeline1:i386 (1.5.7-1) ... Setting up libpsl5:i386 (0.21.2-1) ... Setting up libboost1.74-dev:i386 (1.74.0+ds1-21) ... Setting up libicu72:i386 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-program-options1.74.0:i386 (1.74.0+ds1-21) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:i386 (1.0.9-2+b6) ... Setting up libnghttp2-14:i386 (1.52.0-1) ... Setting up libmagic1:i386 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libboost-program-options1.74-dev:i386 (1.74.0+ds1-21) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg-10) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:i386 (4.8.12-3.1) ... Setting up libblas3:i386 (3.11.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libboost-program-options-dev:i386 (1.74.0.3) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up bash-completion (1:2.11-6) ... Setting up autopoint (0.21-12) ... Setting up icu-devtools (72.1-3) ... Setting up d-shlibs (0.104) ... Setting up libsasl2-2:i386 (2.1.28+dfsg-10) ... Setting up libgfortran5:i386 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:i386 (1.10.0-3+b1) ... Setting up libboost-dev:i386 (1.74.0.3) ... Setting up libbsd0:i386 (0.11.7-2) ... Setting up libelf1:i386 (0.188-2.1) ... Setting up libicu-dev:i386 (72.1-3) ... Setting up libxml2:i386 (2.9.14+dfsg-1.2) ... Setting up libblas-dev:i386 (3.11.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblapack3:i386 (3.11.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libedit2:i386 (3.1-20221030-2) ... Setting up libgfortran-12-dev:i386 (12.2.0-14) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up gfortran-12 (12.2.0-14) ... Setting up liblapack-dev:i386 (3.11.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libllvm14:i386 (1:14.0.6-12) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libclang1-14 (1:14.0.6-12) ... Setting up libcurl3-gnutls:i386 (7.88.1-10) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libclang-cpp14 (1:14.0.6-12) ... Setting up libxerces-c3.2:i386 (3.2.4+debian-1) ... Setting up xsdcxx (4.0.0-9) ... Setting up debhelper (13.11.4) ... Setting up doxygen (1.9.4-4) ... Setting up libxerces-c-dev:i386 (3.2.4+debian-1) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/freecontact-1.0.21/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../freecontact_1.0.21-13_source.changes dpkg-buildpackage: info: source package freecontact dpkg-buildpackage: info: source version 1.0.21-13 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with bash-completion debian/rules override_dh_auto_clean make[1]: Entering directory '/build/freecontact-1.0.21' rm -f build-indep-stamp dh_auto_clean make[1]: Leaving directory '/build/freecontact-1.0.21' dh_clean debian/rules binary dh binary --with bash-completion dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:29: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:29: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:29: the top level configure.ac:29: installing './compile' configure.ac:22: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/freecontact-1.0.21' dh_auto_configure -- --with-boost-libdir=/usr/lib/i386-linux-gnu ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-boost-libdir=/usr/lib/i386-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for g77... no checking for xlf... no checking for f77... f77 checking whether the compiler supports GNU Fortran 77... yes checking whether f77 accepts -g... yes checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/i686-linux-gnu/12 -L/usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/12/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/12/../../.. -lgfortran -lm -lquadmath checking how to print strings... printf checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate WARNING: tempfile is deprecated; consider using mktemp instead. WARNING: tempfile is deprecated; consider using mktemp instead. configure: -O3 enables: -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides checking for boostlib >= 1.20.0... yes checking whether the Boost::Program_Options library is available... yes checking for exit in -lboost_program_options... yes checking for g++ options needed to detect all undeclared functions... none needed checking whether HAVE_BOOST_PROGRAM_OPTIONS is declared... yes checking for OpenMP flag of C++ compiler... -fopenmp checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/i686-linux-gnu/12 -L/usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/12/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/12/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl_gf... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for Xerces C++ Parser headers in /usr/include and /usr/include/xercesc... found checking for Xerces C++ Parser libraries... found checking for Xerces C++ Parser... yes checking for xsdcxx... xsdcxx checking for x86 cpuid output... unknown checking for x86 cpuid 0x00000001 output... 306c1:c020800:fffa3223:178bfbff checking whether mmx is supported... yes checking whether sse is supported... yes checking whether sse2 is supported... yes checking whether sse3 is supported... yes checking whether ssse3 is supported... yes checking whether sse4.1 is supported... yes checking whether sse4.2 is supported... yes checking whether avx is supported... yes checking whether C++ compiler accepts -mmmx... yes checking whether C++ compiler accepts -msse... yes checking whether C++ compiler accepts -msse2... yes checking whether C++ compiler accepts -msse3... yes checking whether C++ compiler accepts -mssse3... yes checking whether C++ compiler accepts -msse4.1... yes checking whether C++ compiler accepts -msse4.2... yes checking whether C++ compiler accepts -mavx... yes checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Doxyfile config.status: creating lib/Makefile config.status: creating src/Makefile config.status: creating lib/config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/freecontact-1.0.21' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/freecontact-1.0.21' dh_auto_configure -- --with-blas=blas --with-boost-libdir=/usr/lib/i386-linux-gnu && /usr/bin/make -C lib doxygen-doc && touch override_dh_auto_configure-indep ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-blas=blas --with-boost-libdir=/usr/lib/i386-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for g77... no checking for xlf... no checking for f77... f77 checking whether the compiler supports GNU Fortran 77... yes checking whether f77 accepts -g... yes checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/i686-linux-gnu/12 -L/usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/12/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/12/../../.. -lgfortran -lm -lquadmath checking how to print strings... printf checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate WARNING: tempfile is deprecated; consider using mktemp instead. WARNING: tempfile is deprecated; consider using mktemp instead. configure: -O3 enables: -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides checking for boostlib >= 1.20.0... yes checking whether the Boost::Program_Options library is available... yes checking for exit in -lboost_program_options... yes checking for g++ options needed to detect all undeclared functions... none needed checking whether HAVE_BOOST_PROGRAM_OPTIONS is declared... yes checking for OpenMP flag of C++ compiler... -fopenmp checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/i686-linux-gnu/12 -L/usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/12/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/12/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sgemm_ in -lblas... yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for Xerces C++ Parser headers in /usr/include and /usr/include/xercesc... found checking for Xerces C++ Parser libraries... found checking for Xerces C++ Parser... yes checking for xsdcxx... xsdcxx checking for x86 cpuid output... unknown checking for x86 cpuid 0x00000001 output... 306c1:2020800:fffa3223:178bfbff checking whether mmx is supported... yes checking whether sse is supported... yes checking whether sse2 is supported... yes checking whether sse3 is supported... yes checking whether ssse3 is supported... yes checking whether sse4.1 is supported... yes checking whether sse4.2 is supported... yes checking whether avx is supported... yes checking whether C++ compiler accepts -mmmx... yes checking whether C++ compiler accepts -msse... yes checking whether C++ compiler accepts -msse2... yes checking whether C++ compiler accepts -msse3... yes checking whether C++ compiler accepts -mssse3... yes checking whether C++ compiler accepts -msse4.1... yes checking whether C++ compiler accepts -msse4.2... yes checking whether C++ compiler accepts -mavx... yes checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Doxyfile config.status: creating lib/Makefile config.status: creating src/Makefile config.status: creating lib/config.h config.status: lib/config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Entering directory '/build/freecontact-1.0.21/lib' rm -rf ../doxygen-doc SRCDIR='.' PROJECT='libfreecontact' DOCDIR='../doxygen-doc' VERSION='1.0.21' PERL_PATH='/usr/bin/perl' HAVE_DOT='NO' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' /usr/bin/doxygen ./Doxyfile warning: Tag 'TCL_SUBST' at line 207 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 854 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1380 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1478 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 1484 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1666 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 1678 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1687 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: source '../examples' is not a readable file or directory... skipping. Doxygen version used: 1.9.4 Notice: Output directory '../doxygen-doc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/freecontact-1.0.21/lib/ Reading and parsing tag files Parsing files Preprocessing /build/freecontact-1.0.21/lib/config.h... Parsing file /build/freecontact-1.0.21/lib/config.h... Preprocessing /build/freecontact-1.0.21/lib/freecontact.cpp... Parsing file /build/freecontact-1.0.21/lib/freecontact.cpp... Preprocessing /build/freecontact-1.0.21/lib/freecontact.h... Parsing file /build/freecontact-1.0.21/lib/freecontact.h... Reading /build/freecontact-1.0.21/lib/glassofast-real.f90... Prepassing fixed form of /build/freecontact-1.0.21/lib/glassofast-real.f90 Parsing file /build/freecontact-1.0.21/lib/glassofast-real.f90... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file config.h... Generating code for file freecontact.cpp... Generating code for file freecontact.h... Generating code for file glassofast-real.f90... Generating file documentation... Generating docs for file config.h... Generating docs for file freecontact.cpp... Generating docs for file freecontact.h... Generating docs for file glassofast-real.f90... Generating page documentation... Generating group documentation... Generating class documentation... Generating concept documentation... Generating namespace index... Generating docs for namespace freecontact Generating docs for compound freecontact::_glasso_timer... Generating docs for compound freecontact::_rawscore_calc_t... Generating docs for compound freecontact::af_vector... Generating docs for compound freecontact::ali_t... Generating docs for compound freecontact::alilen_error... Generating docs for compound freecontact::contact_t... Generating docs for compound freecontact::cov_vector... Generating docs for compound freecontact::ct_vector... Generating docs for compound freecontact::d2matrix... Generating docs for compound freecontact::icme_timeout_error... Generating docs for compound freecontact::parset_t... Generating docs for compound freecontact::pf_vector... Generating docs for compound freecontact::predictor... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... lookup cache used 370/65536 hits=2876 misses=372 finished... make[2]: Leaving directory '/build/freecontact-1.0.21/lib' make[1]: Leaving directory '/build/freecontact-1.0.21' dh_auto_build make -j16 make[1]: Entering directory '/build/freecontact-1.0.21' Making all in lib make[2]: Entering directory '/build/freecontact-1.0.21/lib' make all-am make[3]: Entering directory '/build/freecontact-1.0.21/lib' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libfreecontact_la-freecontact.lo `test -f 'freecontact.cpp' || echo './'`freecontact.cpp /bin/bash ../libtool --tag=FC --mode=compile gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -c -o libfreecontact_la-glassofast-real.lo `test -f 'glassofast-real.f90' || echo './'`glassofast-real.f90 libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -fPIC -DPIC -o .libs/libfreecontact_la-freecontact.o libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -c glassofast-real.f90 -fPIC -o .libs/libfreecontact_la-glassofast-real.o cc1plus: warning: '-Werror=' argument '-funroll-completely-grow-size' is not valid for C++ f951: Warning: '-Werror=' argument '-funroll-completely-grow-size' is not valid for Fortran libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -c glassofast-real.f90 -o libfreecontact_la-glassofast-real.o >/dev/null 2>&1 In file included from freecontact.cpp:32: freecontact.h:69:54: warning: ignoring attributes on template argument 'freecontact::__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] 69 | class LIBFREEC_API ali_t : public std::vector<__m128i> | ^ freecontact.h: In constructor 'freecontact::ali_t::ali_t(uint16_t)': freecontact.h:80:79: warning: ignoring attributes on template argument 'freecontact::__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] 80 | ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) | ^ freecontact.cpp: In function 'freecontact::__m128i freecontact::_mm_setzero_si128()': freecontact.cpp:192:41: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 192 | static inline __m128i _mm_setzero_si128(){ __m128i m; long long *mp = (long long *)&m; mp[1] = mp[0] = 0; return m; } | ^ freecontact.cpp: In destructor 'virtual freecontact::_glasso_timer::~_glasso_timer()': freecontact.cpp:232:43: warning: 'throw' will always call 'terminate' [-Wterminate] 232 | if (timer_delete(_timerid) == -1) throw std::runtime_error(strerror(errno)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ freecontact.cpp:232:43: note: in C++11 destructors default to 'noexcept' freecontact.cpp: In member function 'void freecontact::predictor::get_seq_weights(freq_vec_t&, double&, const freecontact::ali_t&, double, bool, int)': freecontact.cpp:265:17: warning: unused variable 'cache_holds_nseq' [-Wunused-variable] 265 | uint32_t cache_holds_nseq = _cache_holds_nseq(__ali.alilenpad); | ^~~~~~~~~~~~~~~~ freecontact.cpp: In member function 'freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, const freq_vec_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, int, time_t, time_res_t*)': freecontact.cpp:545:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 545 | if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp:545:82: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 545 | if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp:690:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 690 | if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp:690:84: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 690 | if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp: In member function 'freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, bool, int, time_t, time_res_t*)': freecontact.cpp:995:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 995 | if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } | ^~ freecontact.cpp:995:77: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 995 | if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } | ^~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -o libfreecontact_la-freecontact.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fdse -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-modref -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fmove-loop-stores -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -free -freorder-blocks -freorder-blocks-and-partition -freorder-functions -frerun-cse-after-loop -fschedule-insns2 -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftoplevel-reorder -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funroll-completely-grow-size -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -version-info 0:0:0 -Wl,-z,relro -Wl,-z,now -o libfreecontact.la -rpath /usr/lib/i386-linux-gnu libfreecontact_la-freecontact.lo libfreecontact_la-glassofast-real.lo -lrt -L/usr/lib/gcc/i686-linux-gnu/12 -L/usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/12/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/12/../../.. -lgfortran -lm -lquadmath -lblas -llapack libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/12/crtbeginS.o .libs/libfreecontact_la-freecontact.o .libs/libfreecontact_la-glassofast-real.o -lrt -L/usr/lib/gcc/i686-linux-gnu/12 -L/usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/12/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/12/../../.. -lgfortran -lquadmath -lblas -llapack -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i686-linux-gnu/12/crtendS.o /usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu/crtn.o -fopenmp -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -pthread -Wl,-soname -Wl,libfreecontact.so.0 -o .libs/libfreecontact.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libfreecontact.so.0" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so.0") libtool: link: (cd ".libs" && rm -f "libfreecontact.so" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so") libtool: link: ar cr .libs/libfreecontact.a libfreecontact_la-freecontact.o libfreecontact_la-glassofast-real.o libtool: link: ranlib .libs/libfreecontact.a libtool: link: ( cd ".libs" && rm -f "libfreecontact.la" && ln -s "../libfreecontact.la" "libfreecontact.la" ) make[3]: Leaving directory '/build/freecontact-1.0.21/lib' make[2]: Leaving directory '/build/freecontact-1.0.21/lib' Making all in src make[2]: Entering directory '/build/freecontact-1.0.21/src' g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact.o `test -f 'freecontact.cpp' || echo './'`freecontact.cpp xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ BioXSD-1.1.xsd sed -e 's|__pkgdatadir__|/usr/share/freecontact|g;s|__examplesdir__|/usr/share/doc/freecontact/examples|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__PACKAGE_VERSION__|1.0.21|g' "freecontact.cpp" | \ pod2man --utf8 -c 'User Commands' -r "1.0.21" -name FREECONTACT > "freecontact.1" xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_input.xsd xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_output.xsd g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-BioXSD-1.1_xsd.o `test -f 'BioXSD-1.1_xsd.cxx' || echo './'`BioXSD-1.1_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_input_xsd.o `test -f 'freecontact_input_xsd.cxx' || echo './'`freecontact_input_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-_write_bioxsd.o `test -f '_write_bioxsd.cpp' || echo './'`_write_bioxsd.cpp g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_output_xsd.o `test -f 'freecontact_output_xsd.cxx' || echo './'`freecontact_output_xsd.cxx In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/12/memory:76, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66: /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1585:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1665:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1741:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1817:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1893:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1969:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1992:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2105:45: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2186:44: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2267:38: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2348:37: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2611:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3051:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3109:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3287:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3366:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3442:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3500:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3567:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3877:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3935:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4110:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4186:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4262:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4338:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4414:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4490:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4566:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4644:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4720:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4796:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5064:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5589:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5798:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5938:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6115:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6385:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6627:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6703:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6843:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6919:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6995:32: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7203:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7279:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7588:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7742:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7901:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7977:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8130:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8217:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8357:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8444:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8602:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8678:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8818:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8973:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9113:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9189:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9212:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9566:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9642:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9718:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9794:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9974:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10032:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10108:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10285:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10361:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10679:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10755:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10813:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11072:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11148:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11206:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11465:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11544:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11620:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11678:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11745:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12003:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12061:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12377:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/12/memory:76, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66: /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12517:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1585:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12593:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1665:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12669:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1741:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12745:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1817:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1893:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1969:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12821:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1992:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13071:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2105:45: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13211:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2186:44: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2267:38: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13351:39: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2348:37: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13597:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2611:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13832:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13908:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13984:42: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3051:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3109:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14226:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14304:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14380:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3287:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14511:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3366:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14587:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3442:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14663:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3500:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14739:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3567:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14815:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14894:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3877:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3935:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15075:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15151:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15227:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15305:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4110:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4186:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15481:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4262:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15559:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4338:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15635:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4414:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4490:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4566:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4644:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15870:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4720:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15946:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16028:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4796:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16207:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16283:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16459:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16538:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16617:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16693:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16769:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16845:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5064:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17130:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17206:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17282:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17358:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17434:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17510:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17586:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17662:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17738:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17817:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5589:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5798:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5938:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6115:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6385:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6627:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6703:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6843:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6919:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6995:32: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7203:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7279:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7588:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7742:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7901:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7977:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:22916:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8130:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8217:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8357:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8444:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8602:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8678:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8818:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23505:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23645:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23787:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8973:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9113:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23961:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24019:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9189:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24042:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9212:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24200:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24276:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24352:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24428:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24504:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24580:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24658:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24734:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24810:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9566:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9642:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9718:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24970:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9794:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25046:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9974:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25133:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10032:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10108:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10285:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10361:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10679:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10755:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10813:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11072:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11148:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11206:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11465:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25778:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11544:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11620:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11678:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25932:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11745:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26122:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26253:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12003:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12061:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12377:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26781:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26857:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26933:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27009:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12517:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12593:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12669:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12745:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27164:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12821:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27316:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27468:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27620:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13071:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27773:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13211:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27925:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28001:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13351:39: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28088:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13597:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28471:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28547:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28623:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28699:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13832:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28775:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13908:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28851:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13984:42: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28927:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29003:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14226:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14304:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29244:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14380:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14511:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14587:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29415:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14663:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14739:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14815:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14894:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29826:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15075:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15151:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15227:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15305:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15481:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15559:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15635:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15870:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15946:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16028:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16207:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16283:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16459:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16538:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16617:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16693:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16769:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16845:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17130:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17206:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17282:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17358:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17434:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17510:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17586:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17662:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17738:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17817:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:723:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 723 | flat (::std::auto_ptr< flat_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:746:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 746 | FcAlignment (::std::auto_ptr< flat_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:847:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:863:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:881:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:897:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 897 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:913:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 913 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:931:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 931 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:951:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 951 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:973:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 973 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:996:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 996 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1013:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1013 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1029:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1029 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1047:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1047 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1061:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1061 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1078:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1078 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:67:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 67 | flat (::std::auto_ptr< flat_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:22916:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23505:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23645:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23787:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23961:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24019:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24042:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24200:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24276:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24352:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24428:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24504:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24580:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24658:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24734:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24810:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24970:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25046:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25133:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/12/memory:76, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66: /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1585:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1665:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1741:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1817:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1893:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1969:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1992:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2105:45: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2186:44: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2267:38: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25778:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2348:37: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25932:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26122:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26253:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2611:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26781:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26857:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3051:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3109:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26933:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27009:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3287:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3366:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3442:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27164:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3500:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3567:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27316:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27468:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27620:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27773:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3877:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3935:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27925:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28001:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4110:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4186:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28088:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4262:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4338:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4414:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4490:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4566:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4644:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4720:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4796:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28471:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28547:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28623:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28699:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28775:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28851:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28927:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29003:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29244:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5064:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29415:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29826:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5589:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5798:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5938:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6115:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6385:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6627:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6703:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6843:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6919:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6995:32: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:110:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 110 | sequence (::std::auto_ptr< sequence_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:140:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 140 | species (::std::auto_ptr< species_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7203:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7279:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:170:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 170 | reference (::std::auto_ptr< reference_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:200:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 200 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:230:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 230 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:260:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 260 | translationData (::std::auto_ptr< translationData_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7588:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:290:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 290 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7742:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:376:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 376 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:420:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 420 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7901:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7977:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:444:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 444 | len (::std::auto_ptr< len_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:478:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 478 | min (::std::auto_ptr< min_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8130:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8217:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:508:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 508 | max (::std::auto_ptr< max_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8357:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:538:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 538 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8444:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:562:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 562 | minCertainty (::std::auto_ptr< minCertainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8602:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8678:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:592:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 592 | maxCertainty (::std::auto_ptr< maxCertainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8818:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:634:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 634 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:658:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 658 | bases (::std::auto_ptr< bases_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8973:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9113:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:692:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 692 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9189:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9212:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:722:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 722 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:752:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 752 | sequenceReference (::std::auto_ptr< sequenceReference_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:782:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 782 | sequenceName (::std::auto_ptr< sequenceName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:812:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 812 | species (::std::auto_ptr< species_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9566:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9642:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9718:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:842:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 842 | genomeBuild (::std::auto_ptr< genomeBuild_type > x) | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9794:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:97:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | FcAlignment (::std::auto_ptr< flat_type > flat) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:872:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 872 | chromosome (::std::auto_ptr< chromosome_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9974:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10032:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10108:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:902:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 902 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10285:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ freecontact_input_xsd.cxx: In member function 'void freecontact_input_xsd::FcAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': freecontact_input_xsd.cxx:139:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 139 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:932:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 932 | variantAccession (::std::auto_ptr< variantAccession_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10361:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:962:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 962 | variantNote (::std::auto_ptr< variantNote_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10679:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10755:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10813:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1046:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1046 | reversedDirection (::std::auto_ptr< reversedDirection_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11072:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1114:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1114 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11148:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11206:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1180:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1180 | className (::std::auto_ptr< className_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11465:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11544:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11620:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1228:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1228 | properties (::std::auto_ptr< properties_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11678:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11745:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1262:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1262 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12003:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12061:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1346:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1346 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12377:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1398:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1398 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12517:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1428:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1428 | position (::std::auto_ptr< position_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12593:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12669:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12745:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1476:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1476 | occurrenceName (::std::auto_ptr< occurrenceName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1506:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1506 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12821:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1536:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1536 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13071:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1602:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1602 | frame (::std::auto_ptr< frame_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13211:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1632:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1632 | phase (::std::auto_ptr< phase_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13351:39: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1680:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1680 | alignment (::std::auto_ptr< alignment_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:150:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 150 | ::std::auto_ptr< flat_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1708:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1708 | referenceSequence (::std::auto_ptr< referenceSequence_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13597:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1778:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1778 | predicted (::std::auto_ptr< predicted_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13832:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13908:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13984:42: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1808:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1808 | experimental (::std::auto_ptr< experimental_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14226:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14304:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1836:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1836 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14380:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14511:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14587:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14663:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1882:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1882 | methodIdRef (::std::auto_ptr< methodIdRef_type > x) | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14739:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14815:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:212:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 212 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14894:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1934:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1934 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1964:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1964 | methodIdRef (::std::auto_ptr< methodIdRef_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15075:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2012:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2012 | verdict (::std::auto_ptr< verdict_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15151:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15227:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15305:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2040:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2040 | dataReference (::std::auto_ptr< dataReference_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15481:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2088:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2088 | verdict (::std::auto_ptr< verdict_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15559:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15635:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2118:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2118 | reliability (::std::auto_ptr< reliability_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15870:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15946:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(const std::string&, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:229:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 229 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16028:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:234:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 234 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16207:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2206:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2206 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16283:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(const std::string&, xml_schema::error_handler&, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:251:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 251 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2236:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2236 | index (::std::auto_ptr< index_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16459:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16538:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:256:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 256 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2266:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2266 | unit (::std::auto_ptr< unit_type > x) | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16617:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(const std::string&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:269:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 269 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16693:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16769:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2296:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2296 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:274:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 274 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16845:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2330:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2330 | position (::std::auto_ptr< position_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:287:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 287 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:301:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 301 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2354:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2354 | value (::std::auto_ptr< value_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17130:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:311:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 311 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17206:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17282:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17358:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:325:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 325 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17434:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17510:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:340:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 340 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17586:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17662:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:351:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 351 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17738:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:364:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 364 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17817:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:369:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 369 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2384:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2384 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xml_schema::error_handler&, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:382:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 382 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2418:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2418 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:387:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:400:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 400 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2448:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2448 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:405:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 405 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2472:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2472 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(const xercesc_3_2::DOMDocument&, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:415:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 415 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2516:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2516 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:424:12: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 424 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:433:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 433 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2546:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2546 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2570:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2570 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:451:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 451 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2614:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2614 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function 'std::auto_ptr freecontact_input_xsd::alignment(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const xml_schema::properties&)': freecontact_input_xsd.cxx:473:12: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 473 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2644:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2644 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:483:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 483 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2668:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2668 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2712:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2712 | min (::std::auto_ptr< min_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2742:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2742 | max (::std::auto_ptr< max_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2772:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2772 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2796:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2796 | minCertainty (::std::auto_ptr< minCertainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2826:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2826 | maxCertainty (::std::auto_ptr< maxCertainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2870:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2870 | max (::std::auto_ptr< max_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2894:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2894 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2956:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2956 | insertion (::std::auto_ptr< insertion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3004:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3004 | nextPoint (::std::auto_ptr< nextPoint_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3034:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3034 | nextPartition (::std::auto_ptr< nextPartition_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3064:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3064 | samePoint (::std::auto_ptr< samePoint_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3094:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3094 | samePartition (::std::auto_ptr< samePartition_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3124:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3124 | outside (::std::auto_ptr< outside_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3162:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3162 | correspondance (::std::auto_ptr< correspondance_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3210:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3210 | insertion (::std::auto_ptr< insertion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3258:37: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3258 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3296:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3296 | reference (::std::auto_ptr< reference_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3348:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3348 | geneticCode (::std::auto_ptr< geneticCode_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3378:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3378 | phase (::std::auto_ptr< phase_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3408:40: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3408 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3446:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3446 | dbName (::std::auto_ptr< dbName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3476:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3476 | dbUri (::std::auto_ptr< dbUri_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:22916:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3506:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3506 | dbVersion (::std::auto_ptr< dbVersion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3560:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3560 | wsdl (::std::auto_ptr< wsdl_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3590:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3590 | wsdlService (::std::auto_ptr< wsdlService_type > x) | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23505:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3620:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3620 | wsdlPort (::std::auto_ptr< wsdlPort_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23645:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3650:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3650 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23787:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3680:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3680 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23961:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24019:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24042:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3710:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3710 | webserviceDate (::std::auto_ptr< webserviceDate_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3744:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3744 | accession (::std::auto_ptr< accession_type > x) | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24200:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24276:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24352:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3774:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3774 | entryUri (::std::auto_ptr< entryUri_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24428:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24504:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3804:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3804 | entryVersion (::std::auto_ptr< entryVersion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24580:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24658:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3834:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3834 | date (::std::auto_ptr< date_type > x) | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24734:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24810:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3868:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3868 | ontologyName (::std::auto_ptr< ontologyName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24970:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25046:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3898:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3898 | ontologyUri (::std::auto_ptr< ontologyUri_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3928:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3928 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25133:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3986:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3986 | accession (::std::auto_ptr< accession_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4016:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4016 | conceptUri (::std::auto_ptr< conceptUri_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4046:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4046 | term (::std::auto_ptr< term_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4080:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4080 | speciesName (::std::auto_ptr< speciesName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4110:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4110 | speciesNote (::std::auto_ptr< speciesNote_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4144:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4144 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4174:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4174 | supersequence (::std::auto_ptr< supersequence_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4204:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4204 | supersequenceName (::std::auto_ptr< supersequenceName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4234:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4234 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4264:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4264 | variantAccession (::std::auto_ptr< variantAccession_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4294:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4294 | variantNote (::std::auto_ptr< variantNote_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25778:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4358:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4358 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25932:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4388:15: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4388 | uri (::std::auto_ptr< uri_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26122:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4418:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4418 | version (::std::auto_ptr< version_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26253:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4448:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4448 | date (::std::auto_ptr< date_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4478:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4478 | wsdl (::std::auto_ptr< wsdl_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4508:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4508 | wsdlService (::std::auto_ptr< wsdlService_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4538:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4538 | wsdlPort (::std::auto_ptr< wsdlPort_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26781:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4568:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4568 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26857:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26933:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4598:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4598 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27009:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4628:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4628 | webserviceDate (::std::auto_ptr< webserviceDate_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27164:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27316:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27468:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27620:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27773:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27925:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28001:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28088:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28471:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28547:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28623:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28699:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28775:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28851:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28927:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29003:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29244:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29415:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29826:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5311:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5311 | relationName (::std::auto_ptr< relationName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5439:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5439 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5487:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5487 | missing (::std::auto_ptr< missing_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5535:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5535 | position (::std::auto_ptr< position_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5569:32: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5569 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:681:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 681 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5593:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5593 | alignedSequence (::std::auto_ptr< alignedSequence_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:697:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 697 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:715:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 715 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5627:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5627 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:731:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 731 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:747:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:765:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 765 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:785:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 785 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5657:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5657 | sequenceReference (::std::auto_ptr< sequenceReference_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:807:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 807 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:830:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 830 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:847:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:863:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5687:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5687 | sequenceName (::std::auto_ptr< sequenceName_type > x) | ^~~~~~~~ freecontact_output_xsd.hxx:881:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:895:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 895 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:912:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 912 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5717:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5717 | species (::std::auto_ptr< species_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5747:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5747 | genomeBuild (::std::auto_ptr< genomeBuild_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5777:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5777 | chromosome (::std::auto_ptr< chromosome_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5807:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5807 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5837:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5837 | variantAccession (::std::auto_ptr< variantAccession_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5867:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5867 | variantNote (::std::auto_ptr< variantNote_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5895:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5895 | feature (::std::auto_ptr< feature_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5925:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5925 | condensedReferences (::std::auto_ptr< condensedReferences_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6089:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6089 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6117:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6117 | code (::std::auto_ptr< code_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6195:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6195 | aminoacid (::std::auto_ptr< aminoacid_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6249:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6249 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6359:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6359 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6389:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6389 | ontology (::std::auto_ptr< ontology_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6419:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6419 | database (::std::auto_ptr< database_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6449:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6449 | scoreType (::std::auto_ptr< scoreType_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6477:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6477 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6505:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6505 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6533:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6533 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6561:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6561 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6589:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6589 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6617:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6617 | feature (::std::auto_ptr< feature_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6647:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6647 | condensedReferences (::std::auto_ptr< condensedReferences_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6707:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6707 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6737:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6737 | methodIdRef (::std::auto_ptr< methodIdRef_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6767:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6767 | ontology (::std::auto_ptr< ontology_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6797:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6797 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6827:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6827 | database (::std::auto_ptr< database_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6857:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6857 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6887:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6887 | scoreType (::std::auto_ptr< scoreType_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6917:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6917 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6969:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6969 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7003:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7003 | relationName (::std::auto_ptr< relationName_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7103:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7103 | localIdRef (::std::auto_ptr< localIdRef_type > x) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:68:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(const std::string&, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:85:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 85 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:90:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 90 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(const std::string&, xml_schema::error_handler&, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:107:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 107 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:112:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 112 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(const std::string&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:125:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 125 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:130:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 130 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:143:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 143 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:157:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:167:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 167 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:181:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 181 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:196:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 196 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:207:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 207 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_2::InputSource&, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:220:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 220 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:225:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_2::InputSource&, xml_schema::error_handler&, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:238:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 238 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:243:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 243 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_2::InputSource&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:256:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 256 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:261:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 261 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(const xercesc_3_2::DOMDocument&, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:271:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 271 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:280:12: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 280 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:289:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 289 | ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:307:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 307 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function 'std::auto_ptr freecontact_output_xsd::contactMap(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const xml_schema::properties&)': freecontact_output_xsd.cxx:329:12: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 329 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:339:14: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 339 | ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7570:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7570 | BiosequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::BiosequenceRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:7630:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7630 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1507:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/12/memory:76, from /usr/include/boost/core/pointer_traits.hpp:13, from /usr/include/boost/core/allocator_access.hpp:13, from /usr/include/boost/format/alt_sstream.hpp:19, from /usr/include/boost/format/internals.hpp:24, from /usr/include/boost/format.hpp:38, from _write_bioxsd.cpp:17: /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1585:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1665:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1741:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1817:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1893:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1969:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:1992:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2105:45: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2186:44: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2267:38: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2348:37: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7641:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7641 | ::std::auto_ptr< sequence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7658:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7658 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7669:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7669 | ::std::auto_ptr< species_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7686:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7686 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7697:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7697 | ::std::auto_ptr< reference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:2611:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7714:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7714 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7725:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7725 | ::std::auto_ptr< name_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7742:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7742 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7753:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7753 | ::std::auto_ptr< note_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3051:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7770:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7770 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3109:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7781:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7781 | ::std::auto_ptr< translationData_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7798:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7798 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7809:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7809 | ::std::auto_ptr< inlineBaseQuality_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3287:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3366:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3442:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3500:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3567:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:7880:43: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7880 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3877:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:3935:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7929:42: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7929 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4110:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4186:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4262:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4338:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4414:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7978:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7978 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4490:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4566:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4644:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4720:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:4796:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8027:35: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8027 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5064:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::BiosequenceAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:8118:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8118 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8127:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8127 | ::std::auto_ptr< alignedBy_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8143:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8143 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8152:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8152 | ::std::auto_ptr< alignedSequence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8168:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8168 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8179:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8179 | ::std::auto_ptr< note_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5589:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5798:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:5938:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6115:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6385:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6627:36: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6703:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6843:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6919:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:6995:32: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7203:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7279:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7588:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7742:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7901:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:7977:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8130:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8217:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8357:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8444:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8602:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8678:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8818:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:8973:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9113:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9189:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9212:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::AlignedBiosequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:8924:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8924 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8935:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8935 | ::std::auto_ptr< localAlignmentPosition_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8952:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8952 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8963:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8963 | ::std::auto_ptr< sequenceRecord_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8980:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8980 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9566:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8991:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 8991 | ::std::auto_ptr< sequenceReference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9642:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9008:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9008 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9718:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9794:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9019:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9019 | ::std::auto_ptr< sequenceName_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9036:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9036 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9047:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9047 | ::std::auto_ptr< species_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:9974:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9064:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9064 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10032:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10108:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9075:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9075 | ::std::auto_ptr< genomeBuild_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9092:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9092 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9103:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9103 | ::std::auto_ptr< chromosome_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10285:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9120:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9120 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10361:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10419:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9131:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9131 | ::std::auto_ptr< subsequencePosition_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9148:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9148 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10679:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9159:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9159 | ::std::auto_ptr< variantAccession_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10755:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:10813:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9176:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9176 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9187:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9187 | ::std::auto_ptr< variantNote_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9204:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9204 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9213:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9213 | ::std::auto_ptr< gap_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11072:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11148:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11206:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9229:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9229 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9238:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9238 | ::std::auto_ptr< insert_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11465:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9254:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9254 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11544:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9263:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9263 | ::std::auto_ptr< frameshift_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11620:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11678:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:11745:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9279:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9279 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9290:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9290 | ::std::auto_ptr< reversedDirection_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12003:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9307:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9307 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12061:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9316:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9316 | ::std::auto_ptr< sequenceScore_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12377:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12517:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12593:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12669:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12745:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:12821:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13071:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13211:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13351:39: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13597:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::FeatureType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:9610:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9610 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9621:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9621 | ::std::auto_ptr< name_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13832:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9638:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9638 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13908:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9647:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9647 | ::std::auto_ptr< equalConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:13984:42: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9663:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9663 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9672:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9672 | ::std::auto_ptr< equalAlias_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14226:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9688:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9688 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14304:19: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14380:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9699:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9699 | ::std::auto_ptr< className_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14511:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9716:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9716 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14587:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9725:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9725 | ::std::auto_ptr< classConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14663:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14739:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9741:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9741 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14815:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:14894:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9752:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9752 | ::std::auto_ptr< properties_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15075:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15151:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15227:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15305:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15481:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15559:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15635:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::FeatureTypeDetails::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:9866:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9866 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9877:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9877 | ::std::auto_ptr< specificFeatureName_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9894:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9894 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9903:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9903 | ::std::auto_ptr< specificFeatureConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15870:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:15946:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9919:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9919 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16028:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9928:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9928 | ::std::auto_ptr< specificFeatureAlias_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9944:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9944 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16207:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16283:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9953:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9953 | ::std::auto_ptr< databaseEntry_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9969:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9969 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16459:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9980:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9980 | ::std::auto_ptr< note_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16538:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16617:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16693:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16769:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9998:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 9998 | ::std::auto_ptr< association_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:16845:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17130:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17206:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17282:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17358:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17434:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17510:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17586:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17662:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17738:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:17817:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::FeatureOccurrenceData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:10123:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10123 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10134:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10134 | ::std::auto_ptr< appliesToWholeSequence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10151:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10151 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10162:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10162 | ::std::auto_ptr< position_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10179:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10179 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10188:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10188 | ::std::auto_ptr< occurrenceEntryReference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10204:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10204 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10215:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10215 | ::std::auto_ptr< occurrenceName_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10232:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10232 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10243:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10243 | ::std::auto_ptr< occurrenceNote_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10260:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10260 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10271:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10271 | ::std::auto_ptr< featureTypeDetails_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10288:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10288 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10297:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10297 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10313:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10313 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10322:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10322 | ::std::auto_ptr< evidence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10339:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10339 | ::std::auto_ptr< frame_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10352:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10352 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10363:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10363 | ::std::auto_ptr< phase_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10381:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10381 | ::std::auto_ptr< variation_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10392:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10392 | ::std::auto_ptr< alignment_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10460:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10460 | FeatureRecord (::std::auto_ptr< referenceSequence_type > referenceSequence) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::FeatureRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:10509:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10509 | ::std::auto_ptr< referenceSequence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10523:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10523 | ::std::auto_ptr< annotation_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10534:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10534 | ::std::auto_ptr< blockWithOccurrenceReferences_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::Evidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:10633:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10633 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:22916:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10644:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10644 | ::std::auto_ptr< predicted_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10661:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10661 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10672:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10672 | ::std::auto_ptr< experimental_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10733:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10733 | MethodResult (::std::auto_ptr< method_type > method) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23505:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23645:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::MethodResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:10779:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10779 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23787:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10792:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10792 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:23961:34: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10801:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10801 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24019:29: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24042:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24200:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24276:31: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10868:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10868 | Result (::std::auto_ptr< methodIdRef_type > methodIdRef) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24352:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24428:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24504:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24580:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24658:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24734:30: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24810:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::Result::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:10913:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10913 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10924:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10924 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:24970:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10941:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10941 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25046:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10950:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 10950 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25133:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::PredictionResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:11060:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11060 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11071:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11071 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11088:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11088 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11099:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11099 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11116:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11116 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11125:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11125 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11141:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11141 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11152:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11152 | ::std::auto_ptr< verdict_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:11217:32: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11217 | ExperimentalEvidence (::std::auto_ptr< dataReference_type > dataReference) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25778:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:25932:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26122:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26253:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::ExperimentalEvidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:11268:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11268 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11279:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11279 | ::std::auto_ptr< dataReference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11296:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11296 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11305:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11305 | ::std::auto_ptr< citation_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11321:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11321 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26781:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11332:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11332 | ::std::auto_ptr< verdict_type > r ( | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26857:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:26933:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11349:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11349 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27009:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11360:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11360 | ::std::auto_ptr< reliability_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27164:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27316:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27468:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27620:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27773:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::ScoreType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:11482:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11482 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:27925:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11491:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11491 | ::std::auto_ptr< concept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28001:33: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11507:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11507 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11516:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11516 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11532:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11532 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28088:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11541:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11541 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28471:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28547:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28623:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28699:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28775:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28851:27: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:28927:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29003:28: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29244:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::Score::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:11679:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11679 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11690:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 11690 | ::std::auto_ptr< position_type > r ( | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29415:26: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.hxx:29826:24: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:723:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 723 | flat (::std::auto_ptr< flat_type > p); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:746:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 746 | FcAlignment (::std::auto_ptr< flat_type >); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:847:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:863:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:881:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:897:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 897 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:913:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 913 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:931:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 931 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:951:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 951 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:973:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 973 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:996:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 996 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1013:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1013 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1029:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1029 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1047:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1047 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1061:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1061 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.hxx:1078:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1078 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:681:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 681 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:697:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 697 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:715:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 715 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:731:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 731 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:747:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:765:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 765 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:785:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 785 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:807:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 807 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:830:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 830 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:847:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:863:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:881:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::GeneralSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:12613:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12613 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:895:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 895 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.hxx:912:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 912 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12622:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12622 | ::std::auto_ptr< point_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12638:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12638 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12649:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12649 | ::std::auto_ptr< insertion_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12666:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12666 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12675:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12675 | ::std::auto_ptr< segment_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12691:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12691 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12702:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12702 | ::std::auto_ptr< nextPoint_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12719:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12719 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12730:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12730 | ::std::auto_ptr< nextPartition_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12747:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12747 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12758:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12758 | ::std::auto_ptr< samePoint_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12775:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12775 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12786:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12786 | ::std::auto_ptr< samePartition_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12803:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12803 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12814:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12814 | ::std::auto_ptr< outside_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::GeneralOutsideSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:12970:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12970 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12981:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12981 | ::std::auto_ptr< correspondance_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12998:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 12998 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13007:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13007 | ::std::auto_ptr< point_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13023:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13023 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13034:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13034 | ::std::auto_ptr< insertion_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13051:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13051 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13060:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13060 | ::std::auto_ptr< segment_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13076:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13076 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13087:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13087 | ::std::auto_ptr< explicitSequenceReference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::GeneticCode::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:13231:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13231 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13242:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13242 | ::std::auto_ptr< reference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13260:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13260 | ::std::auto_ptr< codon_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::TranslationData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:13354:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13354 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13365:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13365 | ::std::auto_ptr< geneticCode_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13382:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13382 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13393:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13393 | ::std::auto_ptr< phase_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13410:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13410 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13421:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 13421 | ::std::auto_ptr< reversedTranslationDirection_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::SequenceReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:14184:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14184 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14195:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14195 | ::std::auto_ptr< subsequencePosition_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14212:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14212 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14223:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14223 | ::std::auto_ptr< supersequence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14240:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14240 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14251:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14251 | ::std::auto_ptr< supersequenceName_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::Method::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:14410:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14410 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14419:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14419 | ::std::auto_ptr< categoryConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14435:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14435 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14444:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 14444 | ::std::auto_ptr< citation_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact.cpp:25: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument 'freecontact::__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] 69 | class LIBFREEC_API ali_t : public std::vector<__m128i> | ^ ../lib/freecontact.h: In constructor 'freecontact::ali_t::ali_t(uint16_t)': ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument 'freecontact::__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] 80 | ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) | ^ In file included from _write_bioxsd.cpp:22: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument 'freecontact::__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] 69 | class LIBFREEC_API ali_t : public std::vector<__m128i> | ^ ../lib/freecontact.h: In constructor 'freecontact::ali_t::ali_t(uint16_t)': ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument 'freecontact::__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] 80 | ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) | ^ _write_bioxsd.cpp: At global scope: _write_bioxsd.cpp:30:1: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 30 | auto_ptr _get_bxScore(const fc::contact_t& __ct, const std::string& __scid); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: In function 'std::string _xml_flatali(std::istream&, bool)': _write_bioxsd.cpp:38:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 38 | auto_ptr xml( fix::alignment(__is) ); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: In function 'void _write_bioxsd(const freecontact::ali_t&, const resn_mapper_t&, const std::map, std::vector >&, bool)': _write_bioxsd.cpp:53:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 53 | auto_ptr seqSeg_p(new BioXSD::SequenceSegment()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:56:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 56 | auto_ptr seqPos_p(new BioXSD::SequencePosition()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:59:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 59 | auto_ptr seqRef_p(new BioXSD::SequenceReference()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:63:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 63 | auto_ptr seqRec_p( new BioXSD::GeneralAminoacidSequenceRecord( BioXSD::GeneralAminoacidSequence( ucq ))); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:67:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 67 | auto_ptr refSeq_p(new BioXSD::referenceSequence()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:73:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 73 | auto_ptr metCatCon_p(new BioXSD::SemanticConcept()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:79:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:82:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 82 | auto_ptr method_p(new BioXSD::method1("freecontact", "M#fc")); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:86:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 86 | auto_ptr sc_l1_p(new BioXSD::scoreType("S#l1")); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:88:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 88 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:94:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 94 | auto_ptr method_p(new BioXSD::Method("l1-norm")); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:100:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 100 | auto_ptr sc_MI_p(new BioXSD::scoreType("S#MI")); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:102:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 102 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:108:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 108 | auto_ptr method_p(new BioXSD::Method("Mutual information")); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:114:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 114 | auto_ptr sc_fr_p(new BioXSD::scoreType("S#fr")); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:116:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 116 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:122:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 122 | auto_ptr method_p(new BioXSD::Method("Frobenius norm")); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:128:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 128 | auto_ptr featCon_p(new BioXSD::SemanticConcept()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:135:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 135 | auto_ptr feat_p(new BioXSD::FeatureType()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:139:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 139 | auto_ptr cref_p(new BioXSD::condensedReferences1()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:142:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 142 | auto_ptr ann_p(new BioXSD::annotation1(feat_p)); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact.cpp: In function 'int main(int, char**)': freecontact.cpp:165:9: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 165 | auto_ptr ali_ifs_p; | ^~~~~~~~ In file included from /usr/include/c++/12/memory:76, from /usr/include/boost/function/function_base.hpp:16, from /usr/include/boost/function/detail/prologue.hpp:17, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:22, from /usr/include/boost/function/function1.hpp:11, from /usr/include/boost/program_options/value_semantic.hpp:13, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from freecontact.cpp:17: /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ freecontact.cpp:169:25: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 169 | ali_ifs_p = auto_ptr(new std::ifstream(vm["ali"].as().c_str())); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:156:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 156 | auto_ptr pt1_p(new BioXSD::SequencePoint()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:158:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 158 | auto_ptr pt2_p(new BioXSD::SequencePoint()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:161:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 161 | auto_ptr pos_p(new BioXSD::SequencePosition()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:165:17: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 165 | auto_ptr occ_p(new BioXSD::occurrence()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:177:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 177 | auto_ptr occRef_p(new BioXSD::blockWithOccurrenceReferences()); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: At global scope: _write_bioxsd.cpp:199:1: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 199 | auto_ptr _get_bxScore( const fc::contact_t& __ct, const std::string& __scid ) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: In function 'std::auto_ptr _get_bxScore(const freecontact::contact_t&, const std::string&)': _write_bioxsd.cpp:201:5: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 201 | auto_ptr MI_score_p(new BioXSD::Score( bo::str(bo::format("%g") % __ct.score) )); | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::association::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:17632:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17632 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17643:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17643 | ::std::auto_ptr< relationName_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17660:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17660 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17669:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17669 | ::std::auto_ptr< relationConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17685:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17685 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17694:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17694 | ::std::auto_ptr< associatedConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17710:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17710 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17719:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17719 | ::std::auto_ptr< associatedDatabaseEntry_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17735:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17735 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17744:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17744 | ::std::auto_ptr< associatedDatabase_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17760:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17760 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17769:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17769 | ::std::auto_ptr< associatedFeature_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::variation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:17927:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17927 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17938:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17938 | ::std::auto_ptr< canonicalVariant_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17955:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17955 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17964:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17964 | ::std::auto_ptr< variant_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17980:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17980 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17991:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17991 | ::std::auto_ptr< missing_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18008:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18008 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18017:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18017 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18033:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18033 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18044:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18044 | ::std::auto_ptr< position_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18102:21: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18102 | alignment (::std::auto_ptr< alignedSequence_type > alignedSequence) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::alignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:18148:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18148 | ::std::auto_ptr< alignmentOfReference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18161:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18161 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18172:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18172 | ::std::auto_ptr< alignedSequence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::referenceSequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:18292:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18292 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18303:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18303 | ::std::auto_ptr< sequenceRecord_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18320:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18320 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18331:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18331 | ::std::auto_ptr< sequenceReference_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18348:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18348 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18359:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18359 | ::std::auto_ptr< sequenceName_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18376:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18376 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18387:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18387 | ::std::auto_ptr< species_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18404:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18404 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18415:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18415 | ::std::auto_ptr< genomeBuild_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18432:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18432 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18443:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18443 | ::std::auto_ptr< chromosome_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18460:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18460 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18471:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18471 | ::std::auto_ptr< subsequencePosition_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18488:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18488 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18499:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18499 | ::std::auto_ptr< variantAccession_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18516:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18516 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18527:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18527 | ::std::auto_ptr< variantNote_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18590:22: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18590 | annotation (::std::auto_ptr< feature_type > feature) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::annotation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:18638:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18638 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18649:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18649 | ::std::auto_ptr< feature_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18667:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18667 | ::std::auto_ptr< condensedReferences_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18680:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18680 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18689:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18689 | ::std::auto_ptr< occurrence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::blockWithOccurrenceReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:18801:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18801 | ::std::auto_ptr< database_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18812:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18812 | ::std::auto_ptr< ontology_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18823:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18823 | ::std::auto_ptr< semanticConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18834:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18834 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18845:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18845 | ::std::auto_ptr< scoreType_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18856:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 18856 | ::std::auto_ptr< annotation_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::alignmentOfReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:19177:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19177 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19186:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19186 | ::std::auto_ptr< gap_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19202:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19202 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19211:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19211 | ::std::auto_ptr< insert_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19227:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19227 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19236:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19236 | ::std::auto_ptr< frameshift_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19252:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19252 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19261:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19261 | ::std::auto_ptr< sequenceScore_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::condensedReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:19360:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19360 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19371:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19371 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19388:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19388 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19399:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19399 | ::std::auto_ptr< ontology_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19416:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19416 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19427:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19427 | ::std::auto_ptr< database_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19444:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19444 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19455:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19455 | ::std::auto_ptr< scoreType_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:19944:23: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19944 | annotation1 (::std::auto_ptr< feature_type > feature) | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::annotation1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:19992:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 19992 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20003:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20003 | ::std::auto_ptr< feature_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20021:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20021 | ::std::auto_ptr< condensedReferences_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20035:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20035 | ::std::auto_ptr< occurrence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::condensedReferences1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:20290:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20290 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20301:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20301 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20318:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20318 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20329:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20329 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20346:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20346 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20357:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20357 | ::std::auto_ptr< ontology_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20374:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20374 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20385:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20385 | ::std::auto_ptr< ontologyIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20402:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20402 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20413:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20413 | ::std::auto_ptr< database_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20430:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20430 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20441:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20441 | ::std::auto_ptr< databaseIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20458:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20458 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20469:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20469 | ::std::auto_ptr< scoreType_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20486:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20486 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20497:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20497 | ::std::auto_ptr< scoreTypeIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::occurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:20598:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20598 | ::std::auto_ptr< association_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::association1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:20702:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20702 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20713:20: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20713 | ::std::auto_ptr< relationName_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20730:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20730 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20739:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20739 | ::std::auto_ptr< relationConcept_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20755:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20755 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20764:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20764 | ::std::auto_ptr< relationConceptIdRef_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20781:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20781 | ::std::auto_ptr< associatedFeatureOccurrence_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function 'void BioXSD::associatedFeatureOccurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)': BioXSD-1.1_xsd.cxx:20868:16: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20868 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20877:18: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 20877 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -L/usr/lib -Wl,-z,relro -Wl,-z,now -o freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -lboost_program_options -lxerces-c ../lib/libfreecontact.la libtool: link: g++ -fopenmp -g -O2 -ffile-prefix-map=/build/freecontact-1.0.21=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -L/usr/lib -lboost_program_options -lxerces-c ../lib/.libs/libfreecontact.so -pthread -fopenmp make[2]: Leaving directory '/build/freecontact-1.0.21/src' make[2]: Entering directory '/build/freecontact-1.0.21' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/freecontact-1.0.21' make[1]: Leaving directory '/build/freecontact-1.0.21' dh_auto_test make -j16 check "TESTSUITEFLAGS=-j16 --verbose" VERBOSE=1 make[1]: Entering directory '/build/freecontact-1.0.21' Making check in lib make[2]: Entering directory '/build/freecontact-1.0.21/lib' make[2]: Leaving directory '/build/freecontact-1.0.21/lib' Making check in src make[2]: Entering directory '/build/freecontact-1.0.21/src' make test_freecontact make[3]: Entering directory '/build/freecontact-1.0.21/src' make[3]: Nothing to be done for 'test_freecontact'. make[3]: Leaving directory '/build/freecontact-1.0.21/src' make check-TESTS make[3]: Entering directory '/build/freecontact-1.0.21/src' make[4]: Entering directory '/build/freecontact-1.0.21/src' PASS: test_freecontact ============================================================================ Testsuite summary for freecontact 1.0.21 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/build/freecontact-1.0.21/src' make[3]: Leaving directory '/build/freecontact-1.0.21/src' make[2]: Leaving directory '/build/freecontact-1.0.21/src' make[2]: Entering directory '/build/freecontact-1.0.21' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/freecontact-1.0.21' make[1]: Leaving directory '/build/freecontact-1.0.21' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j1 install DESTDIR=/build/freecontact-1.0.21/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/freecontact-1.0.21' Making install in lib make[2]: Entering directory '/build/freecontact-1.0.21/lib' make[3]: Entering directory '/build/freecontact-1.0.21/lib' /bin/mkdir -p '/build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libfreecontact.la '/build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/libfreecontact.so.0.0.0 /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.so.0.0.0 libtool: install: (cd /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so.0 || { rm -f libfreecontact.so.0 && ln -s libfreecontact.so.0.0.0 libfreecontact.so.0; }; }) libtool: install: (cd /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so || { rm -f libfreecontact.so && ln -s libfreecontact.so.0.0.0 libfreecontact.so; }; }) libtool: install: /usr/bin/install -c .libs/libfreecontact.lai /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.la libtool: install: /usr/bin/install -c .libs/libfreecontact.a /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.a libtool: install: chmod 644 /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.a libtool: install: ranlib /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.a libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /bin/mkdir -p '/build/freecontact-1.0.21/debian/tmp/usr/include' /usr/bin/install -c -m 644 freecontact.h '/build/freecontact-1.0.21/debian/tmp/usr/include' make[3]: Leaving directory '/build/freecontact-1.0.21/lib' make[2]: Leaving directory '/build/freecontact-1.0.21/lib' Making install in src make[2]: Entering directory '/build/freecontact-1.0.21/src' make[3]: Entering directory '/build/freecontact-1.0.21/src' /bin/mkdir -p '/build/freecontact-1.0.21/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c freecontact '/build/freecontact-1.0.21/debian/tmp/usr/bin' libtool: warning: '../lib/libfreecontact.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/freecontact /build/freecontact-1.0.21/debian/tmp/usr/bin/freecontact /bin/mkdir -p '/build/freecontact-1.0.21/debian/tmp/usr/share/doc/freecontact/examples' /usr/bin/install -c -m 644 demo_1000.aln demo_1000.psicov.50 PF00071_v25_999.fa PF00071_v25_999.xml PF00071_v25_999.evfold.50 PF00071_v25_999.evfold.50.xml '/build/freecontact-1.0.21/debian/tmp/usr/share/doc/freecontact/examples' /bin/mkdir -p '/build/freecontact-1.0.21/debian/tmp/usr/share/freecontact' /usr/bin/install -c -m 644 BioXSD-1.1.xsd freecontact_input.xsd freecontact_output.xsd '/build/freecontact-1.0.21/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/build/freecontact-1.0.21/debian/tmp/usr/share/freecontact' /usr/bin/install -c a2m2aln '/build/freecontact-1.0.21/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/build/freecontact-1.0.21/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 freecontact.1 '/build/freecontact-1.0.21/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/build/freecontact-1.0.21/src' make[2]: Leaving directory '/build/freecontact-1.0.21/src' make[2]: Entering directory '/build/freecontact-1.0.21' make[3]: Entering directory '/build/freecontact-1.0.21' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/freecontact-1.0.21' make[2]: Leaving directory '/build/freecontact-1.0.21' make[1]: Leaving directory '/build/freecontact-1.0.21' debian/rules override_dh_install make[1]: Entering directory '/build/freecontact-1.0.21' dh_install d-shlibmove --commit \ --multiarch \ --exclude-la \ --devunversioned \ --v5 \ --override s/libgfortran[345]-dev/libgfortran-12-dev/ \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility --> libblas-dev package exists. --> libgfortran-12-dev package exists. --> liblapack-dev package exists. set -e install -d -m 755 debian/libfreecontact-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/libfreecontact0v5/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.a debian/libfreecontact-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.so debian/libfreecontact-dev/usr/lib/i386-linux-gnu mv /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.so.0 debian/libfreecontact0v5/usr/lib/i386-linux-gnu mv /build/freecontact-1.0.21/debian/tmp/usr/lib/i386-linux-gnu/libfreecontact.so.0.0.0 debian/libfreecontact0v5/usr/lib/i386-linux-gnu PKGDEV=libfreecontact-dev PKGSHL=libfreecontact0v5 install -d -m 755 debian/libfreecontact-dev/usr/include mv debian/tmp/usr/include/freecontact.h debian/libfreecontact-dev/usr/include find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/freecontact-1.0.21' debian/rules override_dh_installdocs make[1]: Entering directory '/build/freecontact-1.0.21' dh_installdocs find debian -name jquery.js -delete make[1]: Leaving directory '/build/freecontact-1.0.21' dh_installchangelogs dh_installman debian/rules override_dh_bash-completion make[1]: Entering directory '/build/freecontact-1.0.21' echo "Until bug #668254 is fixed we need to override this" Until bug #668254 is fixed we need to override this mkdir -p debian/freecontact/usr/share/bash-completion/completions cp -a freecontact.bash-completion debian/freecontact/usr/share/bash-completion/completions make[1]: Leaving directory '/build/freecontact-1.0.21' dh_perl dh_link dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/freecontact-1.0.21' dh_compress -Xlibfreecontact.tag -Xdemo_1000.aln -XPF00071_v25_999.fa -XPF00071_v25_999.xml make[1]: Leaving directory '/build/freecontact-1.0.21' dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb debian/rules override_dh_gencontrol make[1]: Entering directory '/build/freecontact-1.0.21' dh_gencontrol -- '-VDescription=FreeContact is a protein residue contact predictor optimized for speed.${Newline}Its input is a multiple sequence alignment. FreeContact can function as an${Newline}accelerated drop-in for the published contact predictors${Newline}EVfold-mfDCA of DS. Marks (2011) and${Newline}PSICOV of D. Jones (2011).${Newline}${Newline}FreeContact is accelerated by a combination of vector instructions, multiple${Newline}threads, and faster implementation of key parts.${Newline}Depending on the alignment, 8-fold or higher speedups are possible.${Newline}${Newline}A sufficiently large alignment is required for meaningful results.${Newline}As a minimum, an alignment with an effective (after-weighting) sequence count${Newline}bigger than the length of the query sequence should be used. Alignments with${Newline}tens of thousands of (effective) sequences are considered good input.${Newline}${Newline}jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite${Newline}can be used to generate the alignments, for example.' dpkg-gencontrol: warning: package libfreecontact-dev: substitution variable ${devlibs:Depends} unused, but is defined make[1]: Leaving directory '/build/freecontact-1.0.21' dh_md5sums dh_builddeb dpkg-deb: building package 'freecontact' in '../freecontact_1.0.21-13_i386.deb'. dpkg-deb: building package 'libfreecontact0v5' in '../libfreecontact0v5_1.0.21-13_i386.deb'. dpkg-deb: building package 'libfreecontact-doc' in '../libfreecontact-doc_1.0.21-13_all.deb'. dpkg-deb: building package 'freecontact-dbgsym' in '../freecontact-dbgsym_1.0.21-13_i386.deb'. dpkg-deb: building package 'libfreecontact0v5-dbgsym' in '../libfreecontact0v5-dbgsym_1.0.21-13_i386.deb'. dpkg-deb: building package 'libfreecontact-dev' in '../libfreecontact-dev_1.0.21-13_i386.deb'. dpkg-genbuildinfo --build=binary -O../freecontact_1.0.21-13_i386.buildinfo dpkg-genchanges --build=binary -O../freecontact_1.0.21-13_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/78256 and its subdirectories I: Current time: Fri Jul 5 00:24:30 -12 2024 I: pbuilder-time-stamp: 1720182270 Sat Jun 3 06:01:31 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Sat Jun 3 06:01:31 UTC 2023 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Sat Jun 3 06:11:54 UTC 2023 I: Deleting $TMPDIR on ionos12-i386.debian.net. Sat Jun 3 06:11:54 UTC 2023 I: freecontact_1.0.21-13_i386.changes: Format: 1.8 Date: Thu, 18 May 2023 11:43:26 +0200 Source: freecontact Binary: freecontact freecontact-dbgsym libfreecontact-dev libfreecontact-doc libfreecontact0v5 libfreecontact0v5-dbgsym Architecture: i386 all Version: 1.0.21-13 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: freecontact - fast protein contact predictor libfreecontact-dev - fast protein contact predictor library - development files libfreecontact-doc - documentation for libfreecontact libfreecontact0v5 - fast protein contact predictor library Closes: 1036260 Changes: freecontact (1.0.21-13) unstable; urgency=medium . * Team upload. * d/rules: update d-shlibmove override to gcc-12. The d-shlibmove override pointed to libgfortran-10-dev, causing ftbfs in bookworm, which ships only libgfortran-12-dev. (Closes: #1036260) Checksums-Sha1: d2789db338dfb4d60007d3ca7d22eadeb211eee1 4212524 freecontact-dbgsym_1.0.21-13_i386.deb 42d6e9dd31d7d3ca793bc43d89b847b8ab38714c 7896 freecontact_1.0.21-13_i386.buildinfo 35e1ed35d07b22ec4443db4f7036a1060fb1aafc 381312 freecontact_1.0.21-13_i386.deb 595401a4444957c6de249061f856f243517e4054 74328 libfreecontact-dev_1.0.21-13_i386.deb a4c44ac5d5f00cacc6d38d7a0826eb97440adeed 105208 libfreecontact-doc_1.0.21-13_all.deb 10db8186f0192c6afb266a06d426da240679b439 526344 libfreecontact0v5-dbgsym_1.0.21-13_i386.deb 04133d8d3e0aad712a2b1686b8fcdf1a0b56e022 65792 libfreecontact0v5_1.0.21-13_i386.deb Checksums-Sha256: 9b3332787b750d88a1a0b26a72cb175cc2d8ef82fa45f74c2f8878a18d090c33 4212524 freecontact-dbgsym_1.0.21-13_i386.deb 48884adcb39b7f8b19af1587b6e1716b006878e414cea8b4b9342e0b533d4874 7896 freecontact_1.0.21-13_i386.buildinfo b73fb491e909ded8328cf51e548f06f9177712ca55a8231dce3b6fd1ba507e6d 381312 freecontact_1.0.21-13_i386.deb 719c85a8b19c53d1610357bf5f497db4ae9dff561f831b7b2297f232711deed5 74328 libfreecontact-dev_1.0.21-13_i386.deb de84cee34e997edc1ace110a0ab6538fa2159100a4a047edf5593a7a4c93a900 105208 libfreecontact-doc_1.0.21-13_all.deb 85c284e88a0d8daef674766255cfc6f6e1e3b1b1f7915ec8b4d1ea4eccf8298c 526344 libfreecontact0v5-dbgsym_1.0.21-13_i386.deb c1dc8138403499a79f391a8ebe604406ec3ae2e21d84fbae39aa2e4be292382a 65792 libfreecontact0v5_1.0.21-13_i386.deb Files: 4ed85d6f73bb7c6edd4ab5dbf970dc5c 4212524 debug optional freecontact-dbgsym_1.0.21-13_i386.deb 0aee6e1994baf69033fb13a54cf45dfd 7896 science optional freecontact_1.0.21-13_i386.buildinfo ede7753fbbb35cfe804535fb25925b1c 381312 science optional freecontact_1.0.21-13_i386.deb 29d5a3c145713ae5495ce1a23abd6a15 74328 libdevel optional libfreecontact-dev_1.0.21-13_i386.deb 55ad3e5667a5d8543d38a718bfbe3a07 105208 doc optional libfreecontact-doc_1.0.21-13_all.deb 7858faa7b2e68920fb69ce379c7ca55a 526344 debug optional libfreecontact0v5-dbgsym_1.0.21-13_i386.deb b73e1aa4c1b28549085efa2c125c90b4 65792 libs optional libfreecontact0v5_1.0.21-13_i386.deb Sat Jun 3 06:11:55 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.xDQDx8dm/freecontact_1.0.21-13.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.xDQDx8dm/freecontact_1.0.21-13.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.xDQDx8dm/freecontact_1.0.21-13.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.xDQDx8dm/b1/freecontact_1.0.21-13_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.xDQDx8dm/b2/freecontact_1.0.21-13_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.389s) 0.389s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.075s) 0.075s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Sat Jun 3 06:11:56 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Sat Jun 3 06:11:56 UTC 2023 I: freecontact from bookworm built successfully and reproducibly on i386. Sat Jun 3 06:11:58 UTC 2023 I: Submitting .buildinfo files to external archives: Sat Jun 3 06:11:58 UTC 2023 I: Submitting 12K b1/freecontact_1.0.21-13_i386.buildinfo.asc Sat Jun 3 06:11:59 UTC 2023 I: Submitting 12K b2/freecontact_1.0.21-13_i386.buildinfo.asc Sat Jun 3 06:12:00 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jun 3 06:12:00 UTC 2023 I: Done submitting .buildinfo files. Sat Jun 3 06:12:00 UTC 2023 I: Removing signed freecontact_1.0.21-13_i386.buildinfo.asc files: removed './b1/freecontact_1.0.21-13_i386.buildinfo.asc' removed './b2/freecontact_1.0.21-13_i386.buildinfo.asc'