Tue Apr 18 22:42:39 UTC 2023 I: starting to build snakemake/bookworm/i386 on jenkins on '2023-04-18 22:42' Tue Apr 18 22:42:39 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_10/11472/console.log Tue Apr 18 22:42:39 UTC 2023 I: Downloading source for bookworm/snakemake=7.21.0-1 --2023-04-18 22:42:39-- http://cdn-fastly.deb.debian.org/debian/pool/main/s/snakemake/snakemake_7.21.0-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 3466 (3.4K) [text/prs.lines.tag] Saving to: ‘snakemake_7.21.0-1.dsc’ 0K ... 100% 245M=0s 2023-04-18 22:42:39 (245 MB/s) - ‘snakemake_7.21.0-1.dsc’ saved [3466/3466] Tue Apr 18 22:42:39 UTC 2023 I: snakemake_7.21.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: snakemake Binary: snakemake, snakemake-doc Architecture: all Version: 7.21.0-1 Maintainer: Debian Med Packaging Team Uploaders: Kevin Murray , Rebecca N. Palmer Homepage: https://snakemake.readthedocs.io/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/snakemake Vcs-Git: https://salsa.debian.org/med-team/snakemake.git Testsuite: autopkgtest Testsuite-Triggers: environment-modules, graphviz, python3-connection-pool, python3-ftputil, python3-jinja2, python3-pandas, python3-pygments, python3-pytest, python3-pytest-mock, python3-requests-mock, python3-retry, r-base-core, stress Build-Depends: ca-certificates, cwltool, debhelper-compat (= 13), dh-python, pybuild-plugin-pyproject, environment-modules, imagemagick, python3, python3-appdirs , python3-biopython , python3-boto3 , python3-botocore , python3-configargparse, python3-connection-pool, python3-datrie, python3-docutils, python3-dropbox , python3-flask , python3-git, python3-jinja2 (>= 3.0~), python3-jsonschema, python3-nbformat, python3-pandas , python3-pkg-resources, python3-psutil, python3-pulp (>= 2.0~), python3-pygments , python3-pytest , python3-pytools , python3-ratelimiter, python3-recommonmark , python3-requests, python3-requests-mock , python3-retry, python3-pytest-mock , python3-rpy2 , python3-setuptools, python3-smart-open (>= 3.0~), python3-sphinx (>= 3.0~) , python3-sphinx-argparse , python3-sphinx-bootstrap-theme , python3-sphinx-rtd-theme , python3-stopit, python3-tabulate, python3-throttler , python3-toposort , python3-wrapt, python3-yaml, r-cran-rmarkdown, stress Package-List: snakemake deb science optional arch=all snakemake-doc deb doc optional arch=all Checksums-Sha1: ea653f696590386a88ae2a700680109b4277859e 8845422 snakemake_7.21.0.orig.tar.gz a1bc2564000db2c0cd3fbd2885a2013362698f86 24828 snakemake_7.21.0-1.debian.tar.xz Checksums-Sha256: 5df401b454f9d345227a47de3c0039fef93bf50dd122669f7b21737b9da5eb67 8845422 snakemake_7.21.0.orig.tar.gz ace7202803b4f54cceea988f9303312fcacf6015a9fada3d30342d7c774476da 24828 snakemake_7.21.0-1.debian.tar.xz Files: 86c3d085081438ffe19008e30a82ed4d 8845422 snakemake_7.21.0.orig.tar.gz 2b9895233aa091282bc04eff42c20643 24828 snakemake_7.21.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJMBAEBCgA2FiEEZ8sxEAXE7b4yF1MI3uUNDVZ+omYFAmPi1fsYHHJlYmVjY2Ff cGFsbWVyQHpvaG8uY29tAAoJEN7lDQ1WfqJm9kIP/1O8OCShE1OiyvVz6JUkbtO+ 4S9++0oXXKNTrkaLSkGMi89H2NaUtfBncNtLc9F8bB0KPoWMiM2vEzwttnPT/ukJ BT8M1NTE0FsKmCL4PLdH5Ga3pF4E+N7T30fBVEcRi095wd9WK7BKbjnRnPh8NEoq /21fE+fiHaApyEQ3MKxsuslihPOja+HdqhucJiFi0NbmbEsQSPy9ar36QDItph4J aZefAGK2ApXxitBu8/vrOONMHnYyS7ZjGFDLG5+51YKDtY96c6XNkuOt6uuRYol8 QWpMftTID+VUAbOVo10sDjT0mWN0sQvhcdgZmRLZJkcT1firK2sEH2B5NoXWo0Xn XrKexRL8a8xuPv5bnitUFlBGh5cnZ0vhdeEdPuSBGbJkNAW03Fq9uVlHZB9ixJee eJpZ+9Dac/Z2yyohmt9cWlT47qsxlgRF28WIuGm4GH3bRWbq55oRUIKCwtXR6xhm KlUdMapp/nQL1/m6yLrADQrRmZStRGIHf5/sKNaH3K7l2W4RaXFosBbpOL2vDi0Q b3Is8FPcb+S/yfYCAP7NhbPgfj3QMTtaUIpNz5NxPbY8vlXz0ZxIvZ4JSlqHw/z5 qBl3bwh3ikGYKt5dpnrhCbi+/GsURJg96T8wOqygP6tyxtv3Ge5nwZ+qyA5ylZw+ +rVS3zA8bqr++/3PUqic =Atok -----END PGP SIGNATURE----- Tue Apr 18 22:42:39 UTC 2023 I: Checking whether the package is not for us Tue Apr 18 22:42:39 UTC 2023 I: Starting 1st build on remote node ionos6-i386.debian.net. Tue Apr 18 22:42:39 UTC 2023 I: Preparing to do remote build '1' on ionos6-i386.debian.net. Tue Apr 18 23:07:16 UTC 2023 I: Deleting $TMPDIR on ionos6-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon May 20 17:05:40 -12 2024 I: pbuilder-time-stamp: 1716267940 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [snakemake_7.21.0-1.dsc] I: copying [./snakemake_7.21.0.orig.tar.gz] I: copying [./snakemake_7.21.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Feb 7 10:51:39 2023 -12 gpgv: using RSA key 67CB311005C4EDBE32175308DEE50D0D567EA266 gpgv: issuer "rebecca_palmer@zoho.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./snakemake_7.21.0-1.dsc: no acceptable signature found dpkg-source: info: extracting snakemake in snakemake-7.21.0 dpkg-source: info: unpacking snakemake_7.21.0.orig.tar.gz dpkg-source: info: unpacking snakemake_7.21.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying local_javascript.patch dpkg-source: info: applying 0003-Compat-fix.patch dpkg-source: info: applying 0006-restore-bin.patch dpkg-source: info: applying 0008-remove_sphinx.ext.patch dpkg-source: info: applying 0009-skip-test-without-google-cloud-sdk.patch dpkg-source: info: applying python3.patch dpkg-source: info: applying workaround_sphinx_issue.patch dpkg-source: info: applying remove_ccbysa_snippets.patch dpkg-source: info: applying fix_test_pytest.patch dpkg-source: info: applying python2to3.patch dpkg-source: info: applying reproducible-build.patch dpkg-source: info: applying test_from_any_directory.patch dpkg-source: info: applying cirumvent-retry.patch dpkg-source: info: applying remove-yte.patch dpkg-source: info: applying skip-tests-with-internet.patch dpkg-source: info: applying skip-tests-with-slurm.patch dpkg-source: info: applying skip-test-lint_long_run.patch dpkg-source: info: applying skip-test_workflow_calling.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/123578/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='a1a66131a0be4587bd782b8ef5bb3af4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='123578' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZklnUQP5/pbuilderrc_AQQG --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZklnUQP5/b1 --logfile b1/build.log snakemake_7.21.0-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos6-i386 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Feb 12 2023 bash -rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 20 2022 cat -rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 20 2022 chown -rwxr-xr-x 1 root root 162024 Sep 20 2022 cp -rwxr-xr-x 1 root root 136916 Jan 5 2023 dash -rwxr-xr-x 1 root root 137160 Sep 20 2022 date -rwxr-xr-x 1 root root 100364 Sep 20 2022 dd -rwxr-xr-x 1 root root 108940 Sep 20 2022 df -rwxr-xr-x 1 root root 162152 Sep 20 2022 dir -rwxr-xr-x 1 root root 87760 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 34664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 84272 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 30240 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 218680 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 19 2022 hostname -rwxr-xr-x 1 root root 75756 Sep 20 2022 ln -rwxr-xr-x 1 root root 55600 Mar 22 2023 login -rwxr-xr-x 1 root root 162152 Sep 20 2022 ls -rwxr-xr-x 1 root root 214568 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 22 2023 more -rwsr-xr-x 1 root root 58912 Mar 22 2023 mount -rwxr-xr-x 1 root root 13856 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 157932 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Feb 12 2023 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 20 2022 rm -rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 20 2022 stty -rwsr-xr-x 1 root root 83492 Mar 22 2023 su -rwxr-xr-x 1 root root 38792 Sep 20 2022 sync -rwxr-xr-x 1 root root 598456 Apr 6 2023 tar -rwxr-xr-x 1 root root 13860 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 20 2022 touch -rwxr-xr-x 1 root root 34664 Sep 20 2022 true -rwxr-xr-x 1 root root 17892 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 22 2023 umount -rwxr-xr-x 1 root root 38760 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/123578/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: ca-certificates, cwltool, debhelper-compat (= 13), dh-python, pybuild-plugin-pyproject, environment-modules, imagemagick, python3, python3-appdirs, python3-biopython, python3-boto3, python3-botocore, python3-configargparse, python3-connection-pool, python3-datrie, python3-docutils, python3-dropbox, python3-flask, python3-git, python3-jinja2 (>= 3.0~), python3-jsonschema, python3-nbformat, python3-pandas, python3-pkg-resources, python3-psutil, python3-pulp (>= 2.0~), python3-pygments, python3-pytest, python3-pytools, python3-ratelimiter, python3-recommonmark, python3-requests, python3-requests-mock, python3-retry, python3-pytest-mock, python3-rpy2, python3-setuptools, python3-smart-open (>= 3.0~), python3-sphinx (>= 3.0~), python3-sphinx-argparse, python3-sphinx-bootstrap-theme, python3-sphinx-rtd-theme, python3-stopit, python3-tabulate, python3-throttler, python3-toposort, python3-wrapt, python3-yaml, r-cran-rmarkdown, stress dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on ca-certificates; however: Package ca-certificates is not installed. pbuilder-satisfydepends-dummy depends on cwltool; however: Package cwltool is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on environment-modules; however: Package environment-modules is not installed. pbuilder-satisfydepends-dummy depends on imagemagick; however: Package imagemagick is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-appdirs; however: Package python3-appdirs is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-boto3; however: Package python3-boto3 is not installed. pbuilder-satisfydepends-dummy depends on python3-botocore; however: Package python3-botocore is not installed. pbuilder-satisfydepends-dummy depends on python3-configargparse; however: Package python3-configargparse is not installed. pbuilder-satisfydepends-dummy depends on python3-connection-pool; however: Package python3-connection-pool is not installed. pbuilder-satisfydepends-dummy depends on python3-datrie; however: Package python3-datrie is not installed. pbuilder-satisfydepends-dummy depends on python3-docutils; however: Package python3-docutils is not installed. pbuilder-satisfydepends-dummy depends on python3-dropbox; however: Package python3-dropbox is not installed. pbuilder-satisfydepends-dummy depends on python3-flask; however: Package python3-flask is not installed. pbuilder-satisfydepends-dummy depends on python3-git; however: Package python3-git is not installed. pbuilder-satisfydepends-dummy depends on python3-jinja2 (>= 3.0~); however: Package python3-jinja2 is not installed. pbuilder-satisfydepends-dummy depends on python3-jsonschema; however: Package python3-jsonschema is not installed. pbuilder-satisfydepends-dummy depends on python3-nbformat; however: Package python3-nbformat is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-psutil; however: Package python3-psutil is not installed. pbuilder-satisfydepends-dummy depends on python3-pulp (>= 2.0~); however: Package python3-pulp is not installed. pbuilder-satisfydepends-dummy depends on python3-pygments; however: Package python3-pygments is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytools; however: Package python3-pytools is not installed. pbuilder-satisfydepends-dummy depends on python3-ratelimiter; however: Package python3-ratelimiter is not installed. pbuilder-satisfydepends-dummy depends on python3-recommonmark; however: Package python3-recommonmark is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-requests-mock; however: Package python3-requests-mock is not installed. pbuilder-satisfydepends-dummy depends on python3-retry; however: Package python3-retry is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-mock; however: Package python3-pytest-mock is not installed. pbuilder-satisfydepends-dummy depends on python3-rpy2; however: Package python3-rpy2 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-smart-open (>= 3.0~); however: Package python3-smart-open is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx (>= 3.0~); however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-argparse; however: Package python3-sphinx-argparse is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-bootstrap-theme; however: Package python3-sphinx-bootstrap-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-stopit; however: Package python3-stopit is not installed. pbuilder-satisfydepends-dummy depends on python3-tabulate; however: Package python3-tabulate is not installed. pbuilder-satisfydepends-dummy depends on python3-throttler; however: Package python3-throttler is not installed. pbuilder-satisfydepends-dummy depends on python3-toposort; however: Package python3-toposort is not installed. pbuilder-satisfydepends-dummy depends on python3-wrapt; however: Package python3-wrapt is not installed. pbuilder-satisfydepends-dummy depends on python3-yaml; however: Package python3-yaml is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rmarkdown; however: Package r-cran-rmarkdown is not installed. pbuilder-satisfydepends-dummy depends on stress; however: Package stress is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} coinor-cbc{a} coinor-libcbc3{a} coinor-libcgl1{a} coinor-libclp1{a} coinor-libcoinutils3v5{a} coinor-libosi1v5{a} cwl-upgrader{a} cwltool{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} environment-modules{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lato{a} fonts-mathjax{a} fonts-urw-base35{a} gettext{a} gettext-base{a} gir1.2-glib-2.0{a} git{a} git-man{a} graphviz{a} groff-base{a} hicolor-icon-theme{a} imagemagick{a} imagemagick-6-common{a} imagemagick-6.q16{a} intltool-debian{a} javascript-common{a} less{a} libabsl20220623{a} libaom3{a} libarchive-zip-perl{a} libavif15{a} libblas3{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgraph6{a} libcurl3-gnutls{a} libcurl4{a} libdatrie1{a} libdav1d6{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} liberror-perl{a} libexpat1{a} libfftw3-double3{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libgfortran5{a} libgirepository-1.0-1{a} libglib2.0-0{a} libgraphite2-3{a} libgts-0.7-5{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif1{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-bootstrap4{a} libjs-d3{a} libjs-es5-shim{a} libjs-highlight.js{a} libjs-jquery{a} libjs-jquery-datatables{a} libjs-jquery-selectize.js{a} libjs-jquery-ui{a} libjs-json{a} libjs-mathjax{a} libjs-microplugin.js{a} libjs-modernizr{a} libjs-popper.js{a} libjs-prettify{a} libjs-sifter.js{a} libjs-sphinxdoc{a} libjs-twitter-bootstrap-datepicker{a} libjs-underscore{a} libjson-perl{a} liblab-gamut1{a} liblapack3{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblqr-1-0{a} libltdl7{a} liblua5.3-0{a} libmagic-mgc{a} libmagic1{a} libmagickcore-6.q16-6{a} libmagickwand-6.q16-6{a} libnghttp2-14{a} libnuma1{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libproc2-0{a} libpsl5{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libraqm0{a} librav1e0{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsm6{a} libsodium23{a} libssh2-1{a} libsub-override-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx265-199{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6{a} libyaml-0-2{a} libyuv0{a} littler{a} m4{a} mailcap{a} man-db{a} media-types{a} mime-support{a} node-bootstrap-sass{a} node-html5shiv{a} node-normalize.css{a} openssl{a} pandoc{a} pandoc-data{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python3{a} python3-adal{a} python3-aiohttp{a} python3-aiosignal{a} python3-alabaster{a} python3-appdirs{a} python3-arcp{a} python3-argcomplete{a} python3-async-timeout{a} python3-attr{a} python3-avro{a} python3-azure{a} python3-azure-storage{a} python3-babel{a} python3-bcrypt{a} python3-biopython{a} python3-blinker{a} python3-boto3{a} python3-botocore{a} python3-build{a} python3-cachecontrol{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-coloredlogs{a} python3-commonmark{a} python3-configargparse{a} python3-connection-pool{a} python3-cryptography{a} python3-cwl-utils{a} python3-dateutil{a} python3-datrie{a} python3-decorator{a} python3-distutils{a} python3-docutils{a} python3-dropbox{a} python3-fastjsonschema{a} python3-filelock{a} python3-flask{a} python3-frozenlist{a} python3-gi{a} python3-git{a} python3-gitdb{a} python3-humanfriendly{a} python3-idna{a} python3-imagesize{a} python3-importlib-metadata{a} python3-iniconfig{a} python3-installer{a} python3-isodate{a} python3-itsdangerous{a} python3-jinja2{a} python3-jmespath{a} python3-jsonschema{a} python3-jupyter-core{a} python3-jwt{a} python3-lib2to3{a} python3-lxml{a} python3-markupsafe{a} python3-marshmallow{a} python3-minimal{a} python3-mistune{a} python3-mistune0{a} python3-more-itertools{a} python3-msal{a} python3-msal-extensions{a} python3-msgpack{a} python3-msrest{a} python3-msrestazure{a} python3-multidict{a} python3-mypy-extensions{a} python3-nacl{a} python3-nbformat{a} python3-networkx{a} python3-numpy{a} python3-oauthlib{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-paramiko{a} python3-pep517{a} python3-pil{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-ply{a} python3-portalocker{a} python3-prov{a} python3-psutil{a} python3-pulp{a} python3-py{a} python3-pydot{a} python3-pygments{a} python3-pyparsing{a} python3-pyrsistent{a} python3-pytest{a} python3-pytest-mock{a} python3-pytools{a} python3-pytz-deprecation-shim{a} python3-ratelimiter{a} python3-rdflib{a} python3-recommonmark{a} python3-renderpm{a} python3-reportlab{a} python3-reportlab-accel{a} python3-requests{a} python3-requests-mock{a} python3-requests-oauthlib{a} python3-retry{a} python3-roman{a} python3-rpy2{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-s3transfer{a} python3-schema-salad{a} python3-setuptools{a} python3-shellescape{a} python3-six{a} python3-smart-open{a} python3-smmap{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-argparse{a} python3-sphinx-bootstrap-theme{a} python3-sphinx-rtd-theme{a} python3-stone{a} python3-stopit{a} python3-strictyaml{a} python3-tabulate{a} python3-throttler{a} python3-toml{a} python3-tomli{a} python3-toposort{a} python3-tqdm{a} python3-traitlets{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-uamqp{a} python3-urllib3{a} python3-werkzeug{a} python3-wheel{a} python3-wrapt{a} python3-yaml{a} python3-yarl{a} python3-zipp{a} python3.11{a} python3.11-minimal{a} r-base-core{a} r-cran-base64enc{a} r-cran-bslib{a} r-cran-cachem{a} r-cran-cli{a} r-cran-commonmark{a} r-cran-crayon{a} r-cran-digest{a} r-cran-ellipsis{a} r-cran-evaluate{a} r-cran-fastmap{a} r-cran-fontawesome{a} r-cran-fs{a} r-cran-glue{a} r-cran-highr{a} r-cran-htmltools{a} r-cran-httpuv{a} r-cran-jquerylib{a} r-cran-jsonlite{a} r-cran-knitr{a} r-cran-later{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-memoise{a} r-cran-mime{a} r-cran-pkgkitten{a} r-cran-promises{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcpp{a} r-cran-rlang{a} r-cran-rmarkdown{a} r-cran-sass{a} r-cran-shiny{a} r-cran-sourcetools{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-tinytex{a} r-cran-vctrs{a} r-cran-withr{a} r-cran-xfun{a} r-cran-xtable{a} r-cran-yaml{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} stress{a} tcl8.6{a} ucf{a} unzip{a} w3c-sgml-lib{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} zip{a} The following packages are RECOMMENDED but will NOT be installed: black curl fonts-liberation2 ghostscript gsfonts libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgts-bin libjson-xs-perl libldap-common libltdl-dev libmagickcore-6.q16-6-extra libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libx11-protocol-perl lynx ncbi-blast+ netpbm node-highlight.js node-jquery nodejs openssh-client psmisc publicsuffix python-biopython-doc python3-asgiref python3-bottleneck python3-bs4 python3-dotenv python3-gdal python3-html5lib python3-invoke python3-json-pointer python3-matplotlib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-openssl python3-pygraphviz python3-pyinotify python3-rfc3987 python3-scipy python3-simplejson python3-sparqlwrapper python3-tables python3-uritemplate python3-webcolors r-base-dev r-cran-bit64 r-cran-codetools r-cran-covr r-cran-curl r-cran-dbi r-cran-dplyr r-cran-dygraphs r-cran-future r-cran-generics r-cran-ggplot2 r-cran-htmlwidgets r-cran-lattice r-cran-markdown r-cran-mockery r-cran-pillar r-cran-rsconnect r-cran-rsqlite r-cran-rsvg r-cran-sp r-cran-testit r-cran-testthat r-cran-thematic r-cran-tibble r-cran-tikzdevice r-cran-tufte r-cran-waldo r-cran-xml2 r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 403 newly installed, 0 to remove and 0 not upgraded. Need to get 234 MB of archives. After unpacking 1569 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 fonts-lato all 2.0-2.1 [2696 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 libfftw3-double3 i386 3.3.10-1 [633 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 libpng16-16 i386 1.6.39-2 [283 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 libfreetype6 i386 2.12.1+dfsg-4 [410 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 libfontenc1 i386 1:1.1.4-1 [24.5 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 x11-common all 1:7.7+23 [252 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 xfonts-utils i386 1:7.7+6 [95.2 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 fonts-urw-base35 all 20200910-7 [10.8 MB] Get: 13 http://deb.debian.org/debian bookworm/main i386 fontconfig-config i386 2.14.1-4 [315 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 libfontconfig1 i386 2.14.1-4 [398 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 libaom3 i386 3.6.0-1 [1895 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 libdav1d6 i386 1.0.0-2 [316 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 libde265-0 i386 1.0.11-1 [193 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 libnuma1 i386 2.0.16-1 [22.7 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libx265-199 i386 3.5-2+b1 [687 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libheif1 i386 1.15.1-1 [230 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 libjbig0 i386 2.1-6.1 [31.6 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo i386 1:2.1.5-2 [169 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 liblcms2-2 i386 2.14-2 [165 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 libglib2.0-0 i386 2.74.6-2 [1467 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 liblqr-1-0 i386 0.4.2-2.1 [30.6 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 libltdl7 i386 2.4.7-5 [394 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 libopenjp2-7 i386 2.5.0-1+b1 [196 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libdeflate0 i386 1.14-1 [57.5 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 liblerc4 i386 4.0.0+ds-2 [181 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 libwebp7 i386 1.2.4-0.1 [293 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libtiff6 i386 4.5.0-5 [332 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 libwebpdemux2 i386 1.2.4-0.1 [99.7 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 libwebpmux3 i386 1.2.4-0.1 [111 kB] Get: 34 http://deb.debian.org/debian bookworm/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 libbsd0 i386 0.11.7-2 [121 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libxcb1 i386 1.15-1 [148 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 libx11-data all 2:1.8.4-2 [292 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 libx11-6 i386 2:1.8.4-2 [782 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 41 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.1+b3 [720 kB] Get: 43 http://deb.debian.org/debian bookworm/main i386 imagemagick-6-common all 8:6.9.11.60+dfsg-1.6 [165 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 libmagickcore-6.q16-6 i386 8:6.9.11.60+dfsg-1.6 [1843 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 libmagickwand-6.q16-6 i386 8:6.9.11.60+dfsg-1.6 [389 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 libpython3.11-minimal i386 3.11.2-6 [813 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 python3.11-minimal i386 3.11.2-6 [2130 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 python3-minimal i386 3.11.2-1+b1 [26.3 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 media-types all 10.0.0 [26.1 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 mailcap all 3.70+nmu1 [32.0 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 mime-support all 3.66 [10.9 kB] Get: 52 http://deb.debian.org/debian bookworm/main i386 readline-common all 8.2-1.3 [69.0 kB] Get: 53 http://deb.debian.org/debian bookworm/main i386 libreadline8 i386 8.2-1.3 [171 kB] Get: 54 http://deb.debian.org/debian bookworm/main i386 libpython3.11-stdlib i386 3.11.2-6 [1799 kB] Get: 55 http://deb.debian.org/debian bookworm/main i386 python3.11 i386 3.11.2-6 [572 kB] Get: 56 http://deb.debian.org/debian bookworm/main i386 libpython3-stdlib i386 3.11.2-1+b1 [9308 B] Get: 57 http://deb.debian.org/debian bookworm/main i386 python3 i386 3.11.2-1+b1 [26.3 kB] Get: 58 http://deb.debian.org/debian bookworm/main i386 sgml-base all 1.31 [15.4 kB] Get: 59 http://deb.debian.org/debian bookworm/main i386 less i386 590-1.2 [140 kB] Get: 60 http://deb.debian.org/debian bookworm/main i386 libproc2-0 i386 2:4.0.2-3 [63.7 kB] Get: 61 http://deb.debian.org/debian bookworm/main i386 procps i386 2:4.0.2-3 [706 kB] Get: 62 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 63 http://deb.debian.org/debian bookworm/main i386 openssl i386 3.0.8-1 [1412 kB] Get: 64 http://deb.debian.org/debian bookworm/main i386 ca-certificates all 20230311 [153 kB] Get: 65 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 66 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 67 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 68 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 69 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 70 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 71 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 72 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 73 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 74 http://deb.debian.org/debian bookworm/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 75 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 76 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 77 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 78 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 79 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 80 http://deb.debian.org/debian bookworm/main i386 libblas3 i386 3.11.0-2 [139 kB] Get: 81 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB] Get: 82 http://deb.debian.org/debian bookworm/main i386 liblapack3 i386 3.11.0-2 [2092 kB] Get: 83 http://deb.debian.org/debian bookworm/main i386 coinor-libcoinutils3v5 i386 2.11.4+repack1-2 [464 kB] Get: 84 http://deb.debian.org/debian bookworm/main i386 coinor-libosi1v5 i386 0.108.6+repack1-2 [279 kB] Get: 85 http://deb.debian.org/debian bookworm/main i386 coinor-libclp1 i386 1.17.6-3 [879 kB] Get: 86 http://deb.debian.org/debian bookworm/main i386 coinor-libcgl1 i386 0.60.3+repack1-4 [414 kB] Get: 87 http://deb.debian.org/debian bookworm/main i386 coinor-libcbc3 i386 2.10.8+ds1-1 [745 kB] Get: 88 http://deb.debian.org/debian bookworm/main i386 coinor-cbc i386 2.10.8+ds1-1 [15.0 kB] Get: 89 http://deb.debian.org/debian bookworm/main i386 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 90 http://deb.debian.org/debian bookworm/main i386 python3-ruamel.yaml.clib i386 0.2.7-1+b2 [115 kB] Get: 91 http://deb.debian.org/debian bookworm/main i386 python3-ruamel.yaml all 0.17.21-1 [103 kB] Get: 92 http://deb.debian.org/debian bookworm/main i386 python3-certifi all 2022.9.24-1 [153 kB] Get: 93 http://deb.debian.org/debian bookworm/main i386 python3-charset-normalizer all 3.0.1-2 [49.3 kB] Get: 94 http://deb.debian.org/debian bookworm/main i386 python3-idna all 3.3-1 [39.4 kB] Get: 95 http://deb.debian.org/debian bookworm/main i386 python3-six all 1.16.0-4 [17.5 kB] Get: 96 http://deb.debian.org/debian bookworm/main i386 python3-urllib3 all 1.26.12-1 [117 kB] Get: 97 http://deb.debian.org/debian bookworm/main i386 python3-chardet all 5.1.0+dfsg-2 [110 kB] Get: 98 http://deb.debian.org/debian bookworm/main i386 python3-requests all 2.28.1+dfsg-1 [67.9 kB] Get: 99 http://deb.debian.org/debian bookworm/main i386 python3-msgpack i386 1.0.3-2+b1 [70.0 kB] Get: 100 http://deb.debian.org/debian bookworm/main i386 python3-cachecontrol all 0.12.12-2 [17.9 kB] Get: 101 http://deb.debian.org/debian bookworm/main i386 python3-mistune all 2.0.4-1 [21.3 kB] Get: 102 http://deb.debian.org/debian bookworm/main i386 python3-mypy-extensions all 0.4.3-4 [5788 B] Get: 103 http://deb.debian.org/debian bookworm/main i386 python3-typing-extensions all 4.4.0-1 [45.2 kB] Get: 104 http://deb.debian.org/debian bookworm/main i386 python3-more-itertools all 8.10.0-2 [53.0 kB] Get: 105 http://deb.debian.org/debian bookworm/main i386 python3-zipp all 1.0.0-6 [6696 B] Get: 106 http://deb.debian.org/debian bookworm/main i386 python3-importlib-metadata all 4.12.0-1 [24.9 kB] Get: 107 http://deb.debian.org/debian bookworm/main i386 python3-isodate all 0.6.1-1 [25.3 kB] Get: 108 http://deb.debian.org/debian bookworm/main i386 python3-pyparsing all 3.0.9-1 [138 kB] Get: 109 http://deb.debian.org/debian bookworm/main i386 python3-rdflib all 6.1.1-1 [385 kB] Get: 110 http://deb.debian.org/debian bookworm/main i386 python3-mistune0 all 0.8.4-2 [15.5 kB] Get: 111 http://deb.debian.org/debian bookworm/main i386 python3-filelock all 3.9.0-1 [9460 B] Get: 112 http://deb.debian.org/debian bookworm/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 113 http://deb.debian.org/debian bookworm/main i386 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 114 http://deb.debian.org/debian bookworm/main i386 python3-schema-salad i386 8.4.20230213094415-1 [734 kB] Get: 115 http://deb.debian.org/debian bookworm/main i386 cwl-upgrader all 1.2.4-1 [14.9 kB] Get: 116 http://deb.debian.org/debian bookworm/main i386 python3-argcomplete all 2.0.0-1 [34.7 kB] Get: 117 http://deb.debian.org/debian bookworm/main i386 python3-humanfriendly all 10.0-3 [85.2 kB] Get: 118 http://deb.debian.org/debian bookworm/main i386 python3-coloredlogs all 15.0.1-1 [47.4 kB] Get: 119 http://deb.debian.org/debian bookworm/main i386 python3-packaging all 23.0-1 [32.5 kB] Get: 120 http://deb.debian.org/debian bookworm/main i386 python3-cwl-utils all 0.22-1 [101 kB] Get: 121 http://deb.debian.org/debian bookworm/main i386 python3-dateutil all 2.8.2-2 [78.3 kB] Get: 122 http://deb.debian.org/debian bookworm/main i386 libxslt1.1 i386 1.1.35-1 [253 kB] Get: 123 http://deb.debian.org/debian bookworm/main i386 python3-lxml i386 4.9.2-1+b1 [1182 kB] Get: 124 http://deb.debian.org/debian bookworm/main i386 python3-networkx all 2.8.8-1 [1425 kB] Get: 125 http://deb.debian.org/debian bookworm/main i386 python3-prov all 2.0.0-2 [95.6 kB] Get: 126 http://deb.debian.org/debian bookworm/main i386 python3-psutil i386 5.9.4-1+b1 [190 kB] Get: 127 http://deb.debian.org/debian bookworm/main i386 libcdt5 i386 2.42.2-7+b3 [40.5 kB] Get: 128 http://deb.debian.org/debian bookworm/main i386 libcgraph6 i386 2.42.2-7+b3 [67.2 kB] Get: 129 http://deb.debian.org/debian bookworm/main i386 libabsl20220623 i386 20220623.1-1 [444 kB] Get: 130 http://deb.debian.org/debian bookworm/main i386 libgav1-1 i386 0.18.0-1+b1 [307 kB] Get: 131 http://deb.debian.org/debian bookworm/main i386 librav1e0 i386 0.5.1-6 [615 kB] Get: 132 http://deb.debian.org/debian bookworm/main i386 libyuv0 i386 0.0~git20230123.b2528b0-1 [108 kB] Get: 133 http://deb.debian.org/debian bookworm/main i386 libavif15 i386 0.11.1-1 [101 kB] Get: 134 http://deb.debian.org/debian bookworm/main i386 libxpm4 i386 1:3.5.12-1.1 [50.0 kB] Get: 135 http://deb.debian.org/debian bookworm/main i386 libgd3 i386 2.3.3-9 [129 kB] Get: 136 http://deb.debian.org/debian bookworm/main i386 libgts-0.7-5 i386 0.7.6+darcs121130-5+b1 [162 kB] Get: 137 http://deb.debian.org/debian bookworm/main i386 libpixman-1-0 i386 0.42.2-1 [548 kB] Get: 138 http://deb.debian.org/debian bookworm/main i386 libxcb-render0 i386 1.15-1 [116 kB] Get: 139 http://deb.debian.org/debian bookworm/main i386 libxcb-shm0 i386 1.15-1 [106 kB] Get: 140 http://deb.debian.org/debian bookworm/main i386 libxrender1 i386 1:0.9.10-1.1 [34.1 kB] Get: 141 http://deb.debian.org/debian bookworm/main i386 libcairo2 i386 1.16.0-7 [627 kB] Get: 142 http://deb.debian.org/debian bookworm/main i386 fontconfig i386 2.14.1-4 [450 kB] Get: 143 http://deb.debian.org/debian bookworm/main i386 libfribidi0 i386 1.0.8-2.1 [65.6 kB] Get: 144 http://deb.debian.org/debian bookworm/main i386 libgraphite2-3 i386 1.3.14-1 [84.0 kB] Get: 145 http://deb.debian.org/debian bookworm/main i386 libharfbuzz0b i386 6.0.0+dfsg-3 [1966 kB] Get: 146 http://deb.debian.org/debian bookworm/main i386 libthai-data all 0.1.29-1 [176 kB] Get: 147 http://deb.debian.org/debian bookworm/main i386 libdatrie1 i386 0.2.13-2+b1 [45.0 kB] Get: 148 http://deb.debian.org/debian bookworm/main i386 libthai0 i386 0.1.29-1 [58.6 kB] Get: 149 http://deb.debian.org/debian bookworm/main i386 libpango-1.0-0 i386 1.50.12+ds-1 [220 kB] Get: 150 http://deb.debian.org/debian bookworm/main i386 libpangoft2-1.0-0 i386 1.50.12+ds-1 [50.5 kB] Get: 151 http://deb.debian.org/debian bookworm/main i386 libpangocairo-1.0-0 i386 1.50.12+ds-1 [35.4 kB] Get: 152 http://deb.debian.org/debian bookworm/main i386 libpathplan4 i386 2.42.2-7+b3 [42.3 kB] Get: 153 http://deb.debian.org/debian bookworm/main i386 libgvc6 i386 2.42.2-7+b3 [711 kB] Get: 154 http://deb.debian.org/debian bookworm/main i386 libgvpr2 i386 2.42.2-7+b3 [197 kB] Get: 155 http://deb.debian.org/debian bookworm/main i386 liblab-gamut1 i386 2.42.2-7+b3 [197 kB] Get: 156 http://deb.debian.org/debian bookworm/main i386 libice6 i386 2:1.0.10-1 [60.8 kB] Get: 157 http://deb.debian.org/debian bookworm/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB] Get: 158 http://deb.debian.org/debian bookworm/main i386 libxt6 i386 1:1.2.1-1.1 [192 kB] Get: 159 http://deb.debian.org/debian bookworm/main i386 libxmu6 i386 2:1.1.3-3 [62.5 kB] Get: 160 http://deb.debian.org/debian bookworm/main i386 libxaw7 i386 2:1.0.14-1 [209 kB] Get: 161 http://deb.debian.org/debian bookworm/main i386 graphviz i386 2.42.2-7+b3 [573 kB] Get: 162 http://deb.debian.org/debian bookworm/main i386 python3-pydot all 1.4.2-1 [32.7 kB] Get: 163 http://deb.debian.org/debian bookworm/main i386 python3-shellescape all 3.4.1-5 [5040 B] Get: 164 http://deb.debian.org/debian bookworm/main i386 python3-arcp all 0.2.1-6 [13.5 kB] Get: 165 http://deb.debian.org/debian bookworm/main i386 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 166 http://deb.debian.org/debian bookworm/main i386 python3-distutils all 3.11.2-2 [131 kB] Get: 167 http://deb.debian.org/debian bookworm/main i386 cwltool all 3.1.20230209161050-1 [483 kB] Get: 168 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 169 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 170 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 171 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 172 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 173 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 174 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 175 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 176 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 177 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 178 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 179 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 180 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 181 http://deb.debian.org/debian bookworm/main i386 dh-python all 5.20230130 [104 kB] Get: 182 http://deb.debian.org/debian bookworm/main i386 xml-core all 0.18+nmu1 [23.8 kB] Get: 183 http://deb.debian.org/debian bookworm/main i386 docutils-common all 0.19+dfsg-6 [127 kB] Get: 184 http://deb.debian.org/debian bookworm/main i386 libtcl8.6 i386 8.6.13+dfsg-2 [1095 kB] Get: 185 http://deb.debian.org/debian bookworm/main i386 tcl8.6 i386 8.6.13+dfsg-2 [120 kB] Get: 186 http://deb.debian.org/debian bookworm/main i386 environment-modules i386 5.2.0-1 [297 kB] Get: 187 http://deb.debian.org/debian bookworm/main i386 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 188 http://deb.debian.org/debian bookworm/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 189 http://deb.debian.org/debian bookworm/main i386 libgirepository-1.0-1 i386 1.74.0-3 [108 kB] Get: 190 http://deb.debian.org/debian bookworm/main i386 gir1.2-glib-2.0 i386 1.74.0-3 [159 kB] Get: 191 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 192 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 193 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 194 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get: 195 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 196 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 197 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 198 http://deb.debian.org/debian bookworm/main i386 libcurl3-gnutls i386 7.88.1-8 [412 kB] Get: 199 http://deb.debian.org/debian bookworm/main i386 liberror-perl all 0.17029-2 [29.0 kB] Get: 200 http://deb.debian.org/debian bookworm/main i386 git-man all 1:2.39.2-1.1 [2049 kB] Get: 201 http://deb.debian.org/debian bookworm/main i386 git i386 1:2.39.2-1.1 [8525 kB] Get: 202 http://deb.debian.org/debian bookworm/main i386 hicolor-icon-theme all 0.17-2 [11.4 kB] Get: 203 http://deb.debian.org/debian bookworm/main i386 imagemagick-6.q16 i386 8:6.9.11.60+dfsg-1.6 [339 kB] Get: 204 http://deb.debian.org/debian bookworm/main i386 imagemagick i386 8:6.9.11.60+dfsg-1.6 [122 kB] Get: 205 http://deb.debian.org/debian bookworm/main i386 javascript-common all 11+nmu1 [6260 B] Get: 206 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-8 [419 kB] Get: 207 http://deb.debian.org/debian bookworm/main i386 libimagequant0 i386 2.17.0-1 [32.9 kB] Get: 208 http://deb.debian.org/debian bookworm/main i386 libjs-popper.js all 1.16.1+ds-6 [52.4 kB] Get: 209 http://deb.debian.org/debian bookworm/main i386 libjs-bootstrap4 all 4.6.1+dfsg1-4 [517 kB] Get: 210 http://deb.debian.org/debian bookworm/main i386 libjs-d3 all 3.5.17-4 [132 kB] Get: 211 http://deb.debian.org/debian bookworm/main i386 libjs-es5-shim all 4.6.7-2 [47.4 kB] Get: 212 http://deb.debian.org/debian bookworm/main i386 libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB] Get: 213 http://deb.debian.org/debian bookworm/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 214 http://deb.debian.org/debian bookworm/main i386 libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB] Get: 215 http://deb.debian.org/debian bookworm/main i386 libjs-sifter.js all 0.6.0+dfsg-3 [12.2 kB] Get: 216 http://deb.debian.org/debian bookworm/main i386 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B] Get: 217 http://deb.debian.org/debian bookworm/main i386 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB] Get: 218 http://deb.debian.org/debian bookworm/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 219 http://deb.debian.org/debian bookworm/main i386 libjs-json all 0~20221030+~1.0.8-1 [20.0 kB] Get: 220 http://deb.debian.org/debian bookworm/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 221 http://deb.debian.org/debian bookworm/main i386 libjs-modernizr all 2.6.2+ds1-5 [47.1 kB] Get: 222 http://deb.debian.org/debian bookworm/main i386 libjs-prettify all 2015.12.04+dfsg-1.1 [41.7 kB] Get: 223 http://deb.debian.org/debian bookworm/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 224 http://deb.debian.org/debian bookworm/main i386 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 225 http://deb.debian.org/debian bookworm/main i386 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB] Get: 226 http://deb.debian.org/debian bookworm/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 227 http://deb.debian.org/debian bookworm/main i386 liblua5.3-0 i386 5.3.6-2 [144 kB] Get: 228 http://deb.debian.org/debian bookworm/main i386 libpaper1 i386 1.1.29 [12.7 kB] Get: 229 http://deb.debian.org/debian bookworm/main i386 libpaper-utils i386 1.1.29 [8972 B] Get: 230 http://deb.debian.org/debian bookworm/main i386 libraqm0 i386 0.7.0-4.1 [11.1 kB] Get: 231 http://deb.debian.org/debian bookworm/main i386 libsodium23 i386 1.0.18-1 [186 kB] Get: 232 http://deb.debian.org/debian bookworm/main i386 libxft2 i386 2.3.6-1 [62.8 kB] Get: 233 http://deb.debian.org/debian bookworm/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB] Get: 234 http://deb.debian.org/debian bookworm/main i386 libtk8.6 i386 8.6.13-2 [824 kB] Get: 235 http://deb.debian.org/debian bookworm/main i386 libuv1 i386 1.44.2-1 [147 kB] Get: 236 http://deb.debian.org/debian bookworm/main i386 libyaml-0-2 i386 0.2.5-1 [55.9 kB] Get: 237 http://deb.debian.org/debian bookworm/main i386 zip i386 3.0-13 [236 kB] Get: 238 http://deb.debian.org/debian bookworm/main i386 unzip i386 6.0-28 [166 kB] Get: 239 http://deb.debian.org/debian bookworm/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 240 http://deb.debian.org/debian bookworm/main i386 r-base-core i386 4.2.2.20221110-2 [26.1 MB] Get: 241 http://deb.debian.org/debian bookworm/main i386 r-cran-littler i386 0.3.17-1 [93.1 kB] Get: 242 http://deb.debian.org/debian bookworm/main i386 littler all 0.3.17-1 [14.4 kB] Get: 243 http://deb.debian.org/debian bookworm/main i386 node-bootstrap-sass all 3.4.3-2 [186 kB] Get: 244 http://deb.debian.org/debian bookworm/main i386 node-html5shiv all 3.7.3+dfsg-5 [13.2 kB] Get: 245 http://deb.debian.org/debian bookworm/main i386 node-normalize.css all 8.0.1-5 [12.7 kB] Get: 246 http://deb.debian.org/debian bookworm/main i386 pandoc-data all 2.17.1.1-1.1 [417 kB] Get: 247 http://deb.debian.org/debian bookworm/main i386 pandoc i386 2.17.1.1-1.1 [27.5 MB] Get: 248 http://deb.debian.org/debian bookworm/main i386 python3-tomli all 2.0.1-2 [17.9 kB] Get: 249 http://deb.debian.org/debian bookworm/main i386 python3-pep517 all 0.13.0-2 [17.4 kB] Get: 250 http://deb.debian.org/debian bookworm/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 251 http://deb.debian.org/debian bookworm/main i386 python3-wheel all 0.38.4-1 [30.8 kB] Get: 252 http://deb.debian.org/debian bookworm/main i386 python3-build all 0.9.0-1 [20.7 kB] Get: 253 http://deb.debian.org/debian bookworm/main i386 python3-installer all 0.6.0+dfsg1-1 [18.1 kB] Get: 254 http://deb.debian.org/debian bookworm/main i386 pybuild-plugin-pyproject all 5.20230130 [9092 B] Get: 255 http://deb.debian.org/debian bookworm/main i386 python-babel-localedata all 2.10.3-1 [5615 kB] Get: 256 http://deb.debian.org/debian bookworm/main i386 python3-cffi-backend i386 1.15.1-5+b1 [88.0 kB] Get: 257 http://deb.debian.org/debian bookworm/main i386 python3-cryptography i386 38.0.4-3 [678 kB] Get: 258 http://deb.debian.org/debian bookworm/main i386 python3-jwt all 2.6.0-1 [26.6 kB] Get: 259 http://deb.debian.org/debian bookworm/main i386 python3-adal all 1.2.7-2 [32.1 kB] Get: 260 http://deb.debian.org/debian bookworm/main i386 python3-multidict i386 6.0.4-1+b1 [32.8 kB] Get: 261 http://deb.debian.org/debian bookworm/main i386 python3-yarl i386 1.8.2-1+b1 [51.8 kB] Get: 262 http://deb.debian.org/debian bookworm/main i386 python3-async-timeout all 4.0.2-1 [7476 B] Get: 263 http://deb.debian.org/debian bookworm/main i386 python3-frozenlist i386 1.3.3-1+b1 [31.1 kB] Get: 264 http://deb.debian.org/debian bookworm/main i386 python3-aiosignal all 1.3.1-1 [6016 B] Get: 265 http://deb.debian.org/debian bookworm/main i386 python3-attr all 22.2.0-1 [65.4 kB] Get: 266 http://deb.debian.org/debian bookworm/main i386 python3-aiohttp i386 3.8.4-1 [251 kB] Get: 267 http://deb.debian.org/debian bookworm/main i386 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 268 http://deb.debian.org/debian bookworm/main i386 python3-appdirs all 1.4.4-3 [13.0 kB] Get: 269 http://deb.debian.org/debian bookworm/main i386 python3-avro all 1.11.1+dfsg-2 [70.5 kB] Get: 270 http://deb.debian.org/debian bookworm/main i386 python3-blinker all 1.5-1 [14.7 kB] Get: 271 http://deb.debian.org/debian bookworm/main i386 python3-oauthlib all 3.2.2-1 [95.4 kB] Get: 272 http://deb.debian.org/debian bookworm/main i386 python3-requests-oauthlib all 1.3.0+ds-1 [20.7 kB] Get: 273 http://deb.debian.org/debian bookworm/main i386 python3-msrest all 0.6.21-2 [48.0 kB] Get: 274 http://deb.debian.org/debian bookworm/main i386 python3-msrestazure all 0.6.4-2 [26.4 kB] Get: 275 http://deb.debian.org/debian bookworm/main i386 python3-azure-storage all 20230112+git-1 [280 kB] Get: 276 http://deb.debian.org/debian bookworm/main i386 python3-colorama all 0.4.6-2 [36.8 kB] Get: 277 http://deb.debian.org/debian bookworm/main i386 python3-pyrsistent i386 0.18.1-1+b3 [60.5 kB] Get: 278 http://deb.debian.org/debian bookworm/main i386 python3-jsonschema all 4.10.3-1 [67.9 kB] Get: 279 http://deb.debian.org/debian bookworm/main i386 python3-marshmallow all 3.18.0-1 [66.3 kB] Get: 280 http://deb.debian.org/debian bookworm/main i386 python3-msal all 1.21.0-1 [85.9 kB] Get: 281 http://deb.debian.org/debian bookworm/main i386 python3-gi i386 3.42.2-3+b1 [230 kB] Get: 282 http://deb.debian.org/debian bookworm/main i386 python3-portalocker all 2.2.1-1 [18.5 kB] Get: 283 http://deb.debian.org/debian bookworm/main i386 python3-msal-extensions all 1.0.0-2 [16.9 kB] Get: 284 http://deb.debian.org/debian bookworm/main i386 python3-strictyaml all 1.6.1-3 [92.9 kB] Get: 285 http://deb.debian.org/debian bookworm/main i386 python3-tqdm all 4.64.1-1 [97.7 kB] Get: 286 http://deb.debian.org/debian bookworm/main i386 python3-uamqp i386 1.5.3-1+b4 [637 kB] Get: 287 http://deb.debian.org/debian bookworm/main i386 python3-yaml i386 6.0-3+b2 [119 kB] Get: 288 http://deb.debian.org/debian bookworm/main i386 python3-azure all 20230112+git-1 [11.9 MB] Get: 289 http://deb.debian.org/debian bookworm/main i386 python3-tz all 2022.7.1-3 [30.1 kB] Get: 290 http://deb.debian.org/debian bookworm/main i386 python3-babel all 2.10.3-1 [103 kB] Get: 291 http://deb.debian.org/debian bookworm/main i386 python3-bcrypt i386 3.2.2-1 [35.0 kB] Get: 292 http://deb.debian.org/debian bookworm/main i386 python3-numpy i386 1:1.24.2-1 [6115 kB] Get: 293 http://deb.debian.org/debian bookworm/main i386 python3-renderpm i386 3.6.12-1+b1 [81.4 kB] Get: 294 http://deb.debian.org/debian bookworm/main i386 python3-reportlab-accel i386 3.6.12-1+b1 [39.4 kB] Get: 295 http://deb.debian.org/debian bookworm/main i386 python3-pil i386 9.4.0-1.1+b1 [473 kB] Get: 296 http://deb.debian.org/debian bookworm/main i386 python3-reportlab all 3.6.12-1 [564 kB] Get: 297 http://deb.debian.org/debian bookworm/main i386 w3c-sgml-lib all 1.3-3 [273 kB] Get: 298 http://deb.debian.org/debian bookworm/main i386 python3-biopython i386 1.80+dfsg-4+b1 [1589 kB] Get: 299 http://deb.debian.org/debian bookworm/main i386 python3-jmespath all 1.0.1-1 [21.1 kB] Get: 300 http://deb.debian.org/debian bookworm/main i386 python3-botocore all 1.29.27+repack-1 [5502 kB] Get: 301 http://deb.debian.org/debian bookworm/main i386 python3-s3transfer all 0.6.0-1 [53.0 kB] Get: 302 http://deb.debian.org/debian bookworm/main i386 python3-boto3 all 1.26.27+dfsg-1 [187 kB] Get: 303 http://deb.debian.org/debian bookworm/main i386 python3-click all 8.1.3-2 [92.2 kB] Get: 304 http://deb.debian.org/debian bookworm/main i386 python3-commonmark all 0.9.1-4 [45.1 kB] Get: 305 http://deb.debian.org/debian bookworm/main i386 python3-configargparse all 1.5.3-1 [26.1 kB] Get: 306 http://deb.debian.org/debian bookworm/main i386 python3-connection-pool all 0.0.3-2 [5584 B] Get: 307 http://deb.debian.org/debian bookworm/main i386 python3-datrie i386 0.8.2-4+b1 [102 kB] Get: 308 http://deb.debian.org/debian bookworm/main i386 python3-decorator all 5.1.1-3 [14.9 kB] Get: 309 http://deb.debian.org/debian bookworm/main i386 python3-roman all 3.3-3 [9880 B] Get: 310 http://deb.debian.org/debian bookworm/main i386 python3-docutils all 0.19+dfsg-6 [382 kB] Get: 311 http://deb.debian.org/debian bookworm/main i386 python3-ply all 3.11-5 [65.8 kB] Get: 312 http://deb.debian.org/debian bookworm/main i386 python3-stone all 3.3.1-2 [117 kB] Get: 313 http://deb.debian.org/debian bookworm/main i386 python3-dropbox all 11.34.0-1 [419 kB] Get: 314 http://deb.debian.org/debian bookworm/main i386 python3-fastjsonschema all 2.16.3-2 [21.6 kB] Get: 315 http://deb.debian.org/debian bookworm/main i386 python3-itsdangerous all 2.1.2-3 [17.0 kB] Get: 316 http://deb.debian.org/debian bookworm/main i386 python3-markupsafe i386 2.1.2-1+b1 [13.3 kB] Get: 317 http://deb.debian.org/debian bookworm/main i386 python3-jinja2 all 3.1.2-1 [119 kB] Get: 318 http://deb.debian.org/debian bookworm/main i386 python3-werkzeug all 2.2.2-2 [205 kB] Get: 319 http://deb.debian.org/debian bookworm/main i386 python3-flask all 2.2.2-2 [105 kB] Get: 320 http://deb.debian.org/debian bookworm/main i386 python3-smmap all 5.0.0-1 [21.0 kB] Get: 321 http://deb.debian.org/debian bookworm/main i386 python3-gitdb all 4.0.9-2 [45.7 kB] Get: 322 http://deb.debian.org/debian bookworm/main i386 python3-git all 3.1.30-1 [135 kB] Get: 323 http://deb.debian.org/debian bookworm/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 324 http://deb.debian.org/debian bookworm/main i386 python3-iniconfig all 1.1.1-2 [6396 B] Get: 325 http://deb.debian.org/debian bookworm/main i386 python3-traitlets all 5.5.0-1 [92.4 kB] Get: 326 http://deb.debian.org/debian bookworm/main i386 python3-jupyter-core all 4.12.0-1 [27.3 kB] Get: 327 http://deb.debian.org/debian bookworm/main i386 python3-nacl i386 1.5.0-2 [57.2 kB] Get: 328 http://deb.debian.org/debian bookworm/main i386 python3-nbformat all 5.5.0-1 [43.2 kB] Get: 329 http://deb.debian.org/debian bookworm/main i386 python3-pandas-lib i386 1.5.3+dfsg-2 [3382 kB] Get: 330 http://deb.debian.org/debian bookworm/main i386 python3-pandas all 1.5.3+dfsg-2 [2885 kB] Get: 331 http://deb.debian.org/debian bookworm/main i386 python3-paramiko all 2.12.0-2 [133 kB] Get: 332 http://deb.debian.org/debian bookworm/main i386 python3-platformdirs all 2.6.0-1 [16.3 kB] Get: 333 http://deb.debian.org/debian bookworm/main i386 python3-pluggy all 1.0.0+repack-1 [19.7 kB] Get: 334 http://deb.debian.org/debian bookworm/main i386 python3-pulp all 2.6.0+dfsg-1 [66.0 kB] Get: 335 http://deb.debian.org/debian bookworm/main i386 python3-py all 1.11.0-1 [89.2 kB] Get: 336 http://deb.debian.org/debian bookworm/main i386 python3-pygments all 2.14.0+dfsg-1 [783 kB] Get: 337 http://deb.debian.org/debian bookworm/main i386 python3-pytest all 7.2.1-2 [236 kB] Get: 338 http://deb.debian.org/debian bookworm/main i386 python3-pytest-mock all 3.8.2-3 [16.5 kB] Get: 339 http://deb.debian.org/debian bookworm/main i386 python3-pytools all 2022.1.14-2 [53.4 kB] Get: 340 http://deb.debian.org/debian bookworm/main i386 python3-pytz-deprecation-shim all 0.1.0.post0-3 [14.4 kB] Get: 341 http://deb.debian.org/debian bookworm/main i386 python3-ratelimiter i386 1.2.0.post0-4 [5740 B] Get: 342 http://deb.debian.org/debian bookworm/main i386 sphinx-common all 5.3.0-4 [653 kB] Get: 343 http://deb.debian.org/debian bookworm/main i386 python3-snowballstemmer all 2.2.0-2 [57.8 kB] Get: 344 http://deb.debian.org/debian bookworm/main i386 python3-sphinx all 5.3.0-4 [549 kB] Get: 345 http://deb.debian.org/debian bookworm/main i386 python3-recommonmark all 0.7.1+ds-5 [17.3 kB] Get: 346 http://deb.debian.org/debian bookworm/main i386 python3-requests-mock all 1.9.3-2 [17.1 kB] Get: 347 http://deb.debian.org/debian bookworm/main i386 python3-retry all 0.9.2-2 [7020 B] Get: 348 http://deb.debian.org/debian bookworm/main i386 python3-tzlocal all 4.2-1 [24.6 kB] Get: 349 http://deb.debian.org/debian bookworm/main i386 python3-rpy2 i386 3.5.9-1 [198 kB] Get: 350 http://deb.debian.org/debian bookworm/main i386 python3-setuptools all 66.1.1-1 [521 kB] Get: 351 http://deb.debian.org/debian bookworm/main i386 python3-smart-open all 5.2.1-5 [87.9 kB] Get: 352 http://deb.debian.org/debian bookworm/main i386 sphinx-rtd-theme-common all 1.2.0+dfsg-1 [997 kB] Get: 353 http://deb.debian.org/debian bookworm/main i386 python3-sphinx-argparse all 0.3.2-1 [37.1 kB] Get: 354 http://deb.debian.org/debian bookworm/main i386 python3-sphinx-bootstrap-theme all 0.8.1-1 [422 kB] Get: 355 http://deb.debian.org/debian bookworm/main i386 python3-sphinx-rtd-theme all 1.2.0+dfsg-1 [27.7 kB] Get: 356 http://deb.debian.org/debian bookworm/main i386 python3-stopit all 1.1.2-2 [12.6 kB] Get: 357 http://deb.debian.org/debian bookworm/main i386 python3-tabulate all 0.8.9-1 [35.2 kB] Get: 358 http://deb.debian.org/debian bookworm/main i386 python3-throttler all 1.2.2-2 [7072 B] Get: 359 http://deb.debian.org/debian bookworm/main i386 python3-toposort all 1.9-1 [7272 B] Get: 360 http://deb.debian.org/debian bookworm/main i386 python3-wrapt i386 1.14.1-2+b2 [42.7 kB] Get: 361 http://deb.debian.org/debian bookworm/main i386 r-cran-base64enc i386 0.1-3-3 [28.4 kB] Get: 362 http://deb.debian.org/debian bookworm/main i386 r-cran-digest i386 0.6.31-1 [179 kB] Get: 363 http://deb.debian.org/debian bookworm/main i386 r-cran-rlang i386 1.0.6-1 [1634 kB] Get: 364 http://deb.debian.org/debian bookworm/main i386 r-cran-fastmap i386 1.1.1-1 [70.3 kB] Get: 365 http://deb.debian.org/debian bookworm/main i386 r-cran-ellipsis i386 0.3.2-2 [35.3 kB] Get: 366 http://deb.debian.org/debian bookworm/main i386 r-cran-htmltools i386 0.5.4-1 [365 kB] Get: 367 http://deb.debian.org/debian bookworm/main i386 r-cran-jsonlite i386 1.8.4+dfsg-1 [445 kB] Get: 368 http://deb.debian.org/debian bookworm/main i386 r-cran-fs i386 1.6.1+dfsg-1 [228 kB] Get: 369 http://deb.debian.org/debian bookworm/main i386 r-cran-r6 all 2.5.1-1 [105 kB] Get: 370 http://deb.debian.org/debian bookworm/main i386 r-cran-rappdirs i386 0.3.3-1 [47.5 kB] Get: 371 http://deb.debian.org/debian bookworm/main i386 r-cran-sass i386 0.4.5+dfsg-1 [990 kB] Get: 372 http://deb.debian.org/debian bookworm/main i386 r-cran-jquerylib all 0.1.4+dfsg-4 [13.1 kB] Get: 373 http://deb.debian.org/debian bookworm/main i386 r-cran-cachem i386 1.0.7-1 [71.8 kB] Get: 374 http://deb.debian.org/debian bookworm/main i386 r-cran-memoise all 2.0.1-1 [53.8 kB] Get: 375 http://deb.debian.org/debian bookworm/main i386 r-cran-mime i386 0.12-1+b1 [36.1 kB] Get: 376 http://deb.debian.org/debian bookworm/main i386 r-cran-bslib all 0.4.2+dfsg-1 [3773 kB] Get: 377 http://deb.debian.org/debian bookworm/main i386 r-cran-cli i386 3.6.0-1 [1288 kB] Get: 378 http://deb.debian.org/debian bookworm/main i386 r-cran-commonmark i386 1.8.1-1 [120 kB] Get: 379 http://deb.debian.org/debian bookworm/main i386 r-cran-crayon all 1.5.2-1 [165 kB] Get: 380 http://deb.debian.org/debian bookworm/main i386 r-cran-evaluate all 0.20-1 [85.9 kB] Get: 381 http://deb.debian.org/debian bookworm/main i386 r-cran-fontawesome all 0.5.0-1 [1304 kB] Get: 382 http://deb.debian.org/debian bookworm/main i386 r-cran-glue i386 1.6.2-1 [152 kB] Get: 383 http://deb.debian.org/debian bookworm/main i386 r-cran-xfun i386 0.37+dfsg-1 [395 kB] Get: 384 http://deb.debian.org/debian bookworm/main i386 r-cran-highr all 0.10+dfsg-1 [38.1 kB] Get: 385 http://deb.debian.org/debian bookworm/main i386 r-cran-pkgkitten all 0.2.2-2 [27.0 kB] Get: 386 http://deb.debian.org/debian bookworm/main i386 r-cran-rcpp i386 1.0.10-1 [2071 kB] Get: 387 http://deb.debian.org/debian bookworm/main i386 r-cran-later i386 1.3.0+dfsg-1+b1 [120 kB] Get: 388 http://deb.debian.org/debian bookworm/main i386 r-cran-magrittr i386 2.0.3-1 [201 kB] Get: 389 http://deb.debian.org/debian bookworm/main i386 r-cran-promises i386 1.2.0.1+dfsg-1 [275 kB] Get: 390 http://deb.debian.org/debian bookworm/main i386 r-cran-httpuv i386 1.6.9+dfsg-1 [491 kB] Get: 391 http://deb.debian.org/debian bookworm/main i386 r-cran-yaml i386 2.3.7-1 [108 kB] Get: 392 http://deb.debian.org/debian bookworm/main i386 r-cran-knitr all 1.42+dfsg-1 [901 kB] Get: 393 http://deb.debian.org/debian bookworm/main i386 r-cran-lifecycle all 1.0.3+dfsg-1 [109 kB] Get: 394 http://deb.debian.org/debian bookworm/main i386 r-cran-stringi i386 1.7.12-1 [872 kB] Get: 395 http://deb.debian.org/debian bookworm/main i386 r-cran-vctrs i386 0.5.2-1 [1388 kB] Get: 396 http://deb.debian.org/debian bookworm/main i386 r-cran-stringr all 1.5.0-1 [295 kB] Get: 397 http://deb.debian.org/debian bookworm/main i386 r-cran-tinytex all 0.44-1 [138 kB] Get: 398 http://deb.debian.org/debian bookworm/main i386 r-cran-xtable all 1:1.8-4-2 [689 kB] Get: 399 http://deb.debian.org/debian bookworm/main i386 r-cran-sourcetools i386 0.1.7-1-1 [47.1 kB] Get: 400 http://deb.debian.org/debian bookworm/main i386 r-cran-withr all 2.5.0-1 [236 kB] Get: 401 http://deb.debian.org/debian bookworm/main i386 r-cran-shiny all 1.7.4+dfsg-2 [2732 kB] Get: 402 http://deb.debian.org/debian bookworm/main i386 r-cran-rmarkdown all 2.20+dfsg-1 [2265 kB] Get: 403 http://deb.debian.org/debian bookworm/main i386 stress i386 1.0.7-1 [22.5 kB] Fetched 234 MB in 3s (80.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../00-fonts-lato_2.0-2.1_all.deb ... Unpacking fonts-lato (2.0-2.1) ... Selecting previously unselected package libfftw3-double3:i386. Preparing to unpack .../01-libfftw3-double3_3.3.10-1_i386.deb ... Unpacking libfftw3-double3:i386 (3.3.10-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../02-libexpat1_2.5.0-1_i386.deb ... Unpacking libexpat1:i386 (2.5.0-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../03-libbrotli1_1.0.9-2+b6_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b6) ... Selecting previously unselected package libpng16-16:i386. Preparing to unpack .../04-libpng16-16_1.6.39-2_i386.deb ... Unpacking libpng16-16:i386 (1.6.39-2) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../05-libfreetype6_2.12.1+dfsg-4_i386.deb ... Unpacking libfreetype6:i386 (2.12.1+dfsg-4) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../06-fonts-dejavu-core_2.37-6_all.deb ... Unpacking fonts-dejavu-core (2.37-6) ... Selecting previously unselected package libfontenc1:i386. Preparing to unpack .../07-libfontenc1_1%3a1.1.4-1_i386.deb ... Unpacking libfontenc1:i386 (1:1.1.4-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../08-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../09-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../10-xfonts-utils_1%3a7.7+6_i386.deb ... Unpacking xfonts-utils (1:7.7+6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../11-fonts-urw-base35_20200910-7_all.deb ... Unpacking fonts-urw-base35 (20200910-7) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../12-fontconfig-config_2.14.1-4_i386.deb ... Unpacking fontconfig-config (2.14.1-4) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../13-libfontconfig1_2.14.1-4_i386.deb ... Unpacking libfontconfig1:i386 (2.14.1-4) ... Selecting previously unselected package libaom3:i386. Preparing to unpack .../14-libaom3_3.6.0-1_i386.deb ... Unpacking libaom3:i386 (3.6.0-1) ... Selecting previously unselected package libdav1d6:i386. Preparing to unpack .../15-libdav1d6_1.0.0-2_i386.deb ... Unpacking libdav1d6:i386 (1.0.0-2) ... Selecting previously unselected package libde265-0:i386. Preparing to unpack .../16-libde265-0_1.0.11-1_i386.deb ... Unpacking libde265-0:i386 (1.0.11-1) ... Selecting previously unselected package libnuma1:i386. Preparing to unpack .../17-libnuma1_2.0.16-1_i386.deb ... Unpacking libnuma1:i386 (2.0.16-1) ... Selecting previously unselected package libx265-199:i386. Preparing to unpack .../18-libx265-199_3.5-2+b1_i386.deb ... Unpacking libx265-199:i386 (3.5-2+b1) ... Selecting previously unselected package libheif1:i386. Preparing to unpack .../19-libheif1_1.15.1-1_i386.deb ... Unpacking libheif1:i386 (1.15.1-1) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../20-libjbig0_2.1-6.1_i386.deb ... Unpacking libjbig0:i386 (2.1-6.1) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../21-libjpeg62-turbo_1%3a2.1.5-2_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-2) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../22-liblcms2-2_2.14-2_i386.deb ... Unpacking liblcms2-2:i386 (2.14-2) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../23-libglib2.0-0_2.74.6-2_i386.deb ... Unpacking libglib2.0-0:i386 (2.74.6-2) ... Selecting previously unselected package liblqr-1-0:i386. Preparing to unpack .../24-liblqr-1-0_0.4.2-2.1_i386.deb ... Unpacking liblqr-1-0:i386 (0.4.2-2.1) ... Selecting previously unselected package libltdl7:i386. Preparing to unpack .../25-libltdl7_2.4.7-5_i386.deb ... Unpacking libltdl7:i386 (2.4.7-5) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../26-libopenjp2-7_2.5.0-1+b1_i386.deb ... Unpacking libopenjp2-7:i386 (2.5.0-1+b1) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../27-libdeflate0_1.14-1_i386.deb ... Unpacking libdeflate0:i386 (1.14-1) ... Selecting previously unselected package liblerc4:i386. Preparing to unpack .../28-liblerc4_4.0.0+ds-2_i386.deb ... Unpacking liblerc4:i386 (4.0.0+ds-2) ... Selecting previously unselected package libwebp7:i386. Preparing to unpack .../29-libwebp7_1.2.4-0.1_i386.deb ... Unpacking libwebp7:i386 (1.2.4-0.1) ... Selecting previously unselected package libtiff6:i386. Preparing to unpack .../30-libtiff6_4.5.0-5_i386.deb ... Unpacking libtiff6:i386 (4.5.0-5) ... Selecting previously unselected package libwebpdemux2:i386. Preparing to unpack .../31-libwebpdemux2_1.2.4-0.1_i386.deb ... Unpacking libwebpdemux2:i386 (1.2.4-0.1) ... Selecting previously unselected package libwebpmux3:i386. Preparing to unpack .../32-libwebpmux3_1.2.4-0.1_i386.deb ... Unpacking libwebpmux3:i386 (1.2.4-0.1) ... 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Setting up libyaml-0-2:i386 (0.2.5-1) ... Setting up libglib2.0-0:i386 (2.74.6-2) ... No schema files found: doing nothing. Setting up libjs-sifter.js (0.6.0+dfsg-3) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Setting up stress (1.0.7-1) ... Setting up unzip (6.0-28) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:i386 (1.0.9-2+b6) ... Setting up liblab-gamut1:i386 (2.42.2-7+b3) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up node-html5shiv (3.7.3+dfsg-5) ... Setting up libnghttp2-14:i386 (1.52.0-1) ... Setting up libmagic1:i386 (1:5.44-3) ... Setting up libdeflate0:i386 (1.14-1) ... Setting up less (590-1.2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... Setting up file (1:5.44-3) ... Setting up libjs-modernizr (2.6.2+ds1-5) ... Setting up libjbig0:i386 (2.1-6.1) ... Setting up librav1e0:i386 (0.5.1-6) ... Setting up python-babel-localedata (2.10.3-1) ... Setting up libjs-es5-shim (4.6.7-2) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg-10) ... Setting up liberror-perl (0.17029-2) ... Setting up libgts-0.7-5:i386 (0.7.6+darcs121130-5+b1) ... Setting up zip (3.0-13) ... Setting up libfontenc1:i386 (1:1.1.4-1) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:i386 (3.11.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libuv1:i386 (1.44.2-1) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-2) ... Setting up libx11-data (2:1.8.4-2) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libpathplan4:i386 (2.42.2-7+b3) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:i386 (1.0.8-2.1) ... 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Setting up liblapack3:i386 (3.11.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libxcb1:i386 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up mime-support (3.66) ... Setting up libavif15:i386 (0.11.1-1) ... Setting up libtool (2.4.7-5) ... Setting up libxcb-render0:i386 (1.15-1) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libwebpdemux2:i386 (1.2.4-0.1) ... Setting up libreadline8:i386 (8.2-1.3) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libxcb-shm0:i386 (1.15-1) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up coinor-libcoinutils3v5:i386 (2.11.4+repack1-2) ... Setting up libthai0:i386 (0.1.29-1) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up pandoc (2.17.1.1-1.1) ... Setting up libfreetype6:i386 (2.12.1+dfsg-4) ... Setting up ucf (3.0043+nmu1) ... Setting up gir1.2-glib-2.0:i386 (1.74.0-3) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up coinor-libosi1v5:i386 (0.108.6+repack1-2) ... Setting up libx265-199:i386 (3.5-2+b1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libgvpr2:i386 (2.42.2-7+b3) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up xml-core (0.18+nmu1) ... Setting up libxslt1.1:i386 (1.1.35-1) ... Setting up libcurl4:i386 (7.88.1-8) ... Setting up libx11-6:i386 (2:1.8.4-2) ... Setting up libharfbuzz0b:i386 (6.0.0+dfsg-3) ... Setting up libfontconfig1:i386 (2.14.1-4) ... Setting up libsm6:i386 (2:1.2.3-1) ... Setting up libpaper1:i386 (1.1.29) ... Creating config file /etc/papersize with new version Setting up fontconfig (2.14.1-4) ... Regenerating fonts cache... done. Setting up libxpm4:i386 (1:3.5.12-1.1) ... Setting up libxrender1:i386 (1:0.9.10-1.1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:i386 (3.11.2-6) ... Setting up libpango-1.0-0:i386 (1.50.12+ds-1) ... Setting up libheif1:i386 (1.15.1-1) ... Setting up libxext6:i386 (2:1.3.4-1+b1) ... Setting up libcurl3-gnutls:i386 (7.88.1-8) ... Setting up libpaper-utils (1.1.29) ... Setting up xfonts-utils (1:7.7+6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.16.0-7) ... Setting up libmagickcore-6.q16-6:i386 (8:6.9.11.60+dfsg-1.6) ... Setting up coinor-libclp1:i386 (1.17.6-3) ... Setting up libraqm0:i386 (0.7.0-4.1) ... Setting up sphinx-common (5.3.0-4) ... Setting up libgd3:i386 (2.3.3-9) ... Setting up git (1:2.39.2-1.1) ... Setting up libxt6:i386 (1:1.2.1-1.1) ... 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Setting up python3-ratelimiter (1.2.0.post0-4) ... Setting up python3-async-timeout (4.0.2-1) ... Setting up python3-six (1.16.0-4) ... Setting up python3-isodate (0.6.1-1) ... Setting up python3-pil:i386 (9.4.0-1.1+b1) ... Setting up python3-roman (3.3-3) ... Setting up python3-decorator (5.1.1-3) ... Setting up python3-jinja2 (3.1.2-1) ... Setting up python3-packaging (23.0-1) ... Setting up coinor-cbc (2.10.8+ds1-1) ... Setting up python3-pyparsing (3.0.9-1) ... Setting up python3-humanfriendly (10.0-3) ... Setting up python3-certifi (2022.9.24-1) ... Setting up python3-sphinx-bootstrap-theme (0.8.1-1) ... Setting up python3-snowballstemmer (2.2.0-2) ... Setting up python3-avro (1.11.1+dfsg-2) ... Setting up python3-werkzeug (2.2.2-2) ... Setting up python3-jmespath (1.0.1-1) ... Setting up python3-gi (3.42.2-3+b1) ... Setting up python3-reportlab-accel:i386 (3.6.12-1+b1) ... Setting up r-base-core (4.2.2.20221110-2) ... Creating config file /etc/R/Renviron with new version Setting up python3-connection-pool (0.0.3-2) ... Setting up r-cran-crayon (1.5.2-1) ... Setting up libgvc6 (2.42.2-7+b3) ... Setting up python3-idna (3.3-1) ... Setting up python3-wrapt (1.14.1-2+b2) ... Setting up python3-throttler (1.2.2-2) ... Setting up r-cran-sourcetools (0.1.7-1-1) ... Setting up python3-typing-extensions (4.4.0-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.6.0+dfsg1-1) ... Setting up python3-urllib3 (1.26.12-1) ... Setting up python3-pluggy (1.0.0+repack-1) ... Setting up python3-reportlab (3.6.12-1) ... Setting up imagemagick-6.q16 (8:6.9.11.60+dfsg-1.6) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up python3-fastjsonschema (2.16.3-2) ... Setting up python3-mistune0 (0.8.4-2) ... Setting up python3-pyrsistent:i386 (0.18.1-1+b3) ... Setting up python3-lxml:i386 (4.9.2-1+b1) ... Setting up python3-traitlets (5.5.0-1) ... Setting up python3-portalocker (2.2.1-1) ... Setting up python3-dateutil (2.8.2-2) ... Setting up python3-msgpack (1.0.3-2+b1) ... Setting up python3-datrie:i386 (0.8.2-4+b1) ... Setting up python3-shellescape (3.4.1-5) ... Setting up r-cran-commonmark (1.8.1-1) ... Setting up r-cran-r6 (2.5.1-1) ... Setting up r-cran-pkgkitten (0.2.2-2) ... Setting up environment-modules (5.2.0-1) ... Setting up python3-argcomplete (2.0.0-1) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-coloredlogs (15.0.1-1) ... Setting up python3-appdirs (1.4.4-3) ... Setting up python3-yarl (1.8.2-1+b1) ... Setting up python3-smmap (5.0.0-1) ... Setting up python3-mistune (2.0.4-1) ... Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up python3-cffi-backend:i386 (1.15.1-5+b1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-blinker (1.5-1) ... Setting up python3-commonmark (0.9.1-4) ... Setting up r-cran-littler (0.3.17-1) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up python3-toposort (1.9-1) ... Setting up python3-more-itertools (8.10.0-2) ... Setting up graphviz (2.42.2-7+b3) ... Setting up python3-configargparse (1.5.3-1) ... Setting up python3-arcp (0.2.1-6) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up r-cran-fs (1.6.1+dfsg-1) ... Setting up r-cran-rcpp (1.0.10-1) ... Setting up python3-attr (22.2.0-1) ... Setting up python3-filelock (3.9.0-1) ... Setting up r-cran-rlang (1.0.6-1) ... Setting up python3-renderpm:i386 (3.6.12-1+b1) ... Setting up littler (0.3.17-1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3-tomli (2.0.1-2) ... Setting up python3-py (1.11.0-1) ... Setting up python3-jwt (2.6.0-1) ... Setting up r-cran-xfun (0.37+dfsg-1) ... Setting up python3-babel (2.10.3-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-colorama (0.4.6-2) ... Setting up r-cran-withr (2.5.0-1) ... Setting up python3-pulp (2.6.0+dfsg-1) ... Setting up python3-pytz-deprecation-shim (0.1.0.post0-3) ... Setting up python3-charset-normalizer (3.0.1-2) ... Setting up r-cran-mime (0.12-1+b1) ... Setting up python3-pytest (7.2.1-2) ... Setting up python3-alabaster (0.7.12-1) ... Setting up python3-pydot (1.4.2-1) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up python3-mypy-extensions (0.4.3-4) ... Setting up r-cran-digest (0.6.31-1) ... Setting up r-cran-yaml (2.3.7-1) ... Setting up python3-bcrypt (3.2.2-1) ... Setting up python3-ply (3.11-5) ... Setting up python3-tqdm (4.64.1-1) ... Setting up r-cran-evaluate (0.20-1) ... Setting up python3-ruamel.yaml.clib:i386 (0.2.7-1+b2) ... Setting up r-cran-highr (0.10+dfsg-1) ... Setting up python3-aiohttp (3.8.4-1) ... Setting up python3-marshmallow (3.18.0-1) ... Setting up python3-tabulate (0.8.9-1) ... Setting up python3-itsdangerous (2.1.2-3) ... Setting up python3-yaml (6.0-3+b2) ... Setting up python3-gitdb (4.0.9-2) ... Setting up python3-uamqp (1.5.3-1+b4) ... Setting up python3-zipp (1.0.0-6) ... Setting up python3-click (8.1.3-2) ... Setting up r-cran-glue (1.6.2-1) ... Setting up python3-networkx (2.8.8-1) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up python3-wheel (0.38.4-1) ... Setting up r-cran-cli (3.6.0-1) ... Setting up r-cran-lifecycle (1.0.3+dfsg-1) ... Setting up r-cran-fastmap (1.1.1-1) ... Setting up r-cran-jsonlite (1.8.4+dfsg-1) ... Setting up python3-stone (3.3.1-2) ... Setting up python3-pygments (2.14.0+dfsg-1) ... Setting up python3-chardet (5.1.0+dfsg-2) ... Setting up r-cran-stringi (1.7.12-1) ... Setting up python3-jsonschema (4.10.3-1) ... Setting up python3-cryptography (38.0.4-3) ... Setting up python3-git (3.1.30-1) ... Setting up python3-requests (2.28.1+dfsg-1) ... Setting up python3-retry (0.9.2-2) ... Setting up r-cran-later (1.3.0+dfsg-1+b1) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up imagemagick (8:6.9.11.60+dfsg-1.6) ... Setting up r-cran-tinytex (0.44-1) ... Setting up r-cran-knitr (1.42+dfsg-1) ... Setting up python3-ruamel.yaml (0.17.21-1) ... Setting up python3-adal (1.2.7-2) ... Setting up python3-pytest-mock (3.8.2-3) ... Setting up python3-stopit (1.1.2-2) ... Setting up python3-rdflib (6.1.1-1) ... Setting up r-cran-cachem (1.0.7-1) ... Setting up python3-cachecontrol (0.12.12-2) ... Setting up python3-tzlocal (4.2-1) ... Setting up r-cran-vctrs (0.5.2-1) ... Setting up python3-jupyter-core (4.12.0-1) ... Setting up python3-nacl (1.5.0-2) ... Setting up python3-dropbox (11.34.0-1) ... Setting up r-cran-ellipsis (0.3.2-2) ... Setting up r-cran-stringr (1.5.0-1) ... Setting up python3-importlib-metadata (4.12.0-1) ... Setting up python3-flask (2.2.2-2) ... Setting up python3-pandas-lib:i386 (1.5.3+dfsg-2) ... Setting up python3-schema-salad (8.4.20230213094415-1) ... Setting up python3-msal (1.21.0-1) ... Setting up python3-msal-extensions (1.0.0-2) ... Setting up python3-nbformat (5.5.0-1) ... Setting up python3-prov (2.0.0-2) ... Setting up python3-strictyaml (1.6.1-3) ... Setting up python3-oauthlib (3.2.2-1) ... Setting up python3-pandas (1.5.3+dfsg-2) ... Setting up cwl-upgrader (1.2.4-1) ... Setting up python3-pep517 (0.13.0-2) ... Setting up python3-requests-mock (1.9.3-2) ... Setting up python3-botocore (1.29.27+repack-1) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-promises (1.2.0.1+dfsg-1) ... Setting up python3-pytools (2022.1.14-2) ... Setting up r-cran-htmltools (0.5.4-1) ... Setting up python3-rpy2 (3.5.9-1) ... Setting up r-cran-sass (0.4.5+dfsg-1) ... Setting up python3-paramiko (2.12.0-2) ... Setting up python3-build (0.9.0-1) ... Setting up python3-requests-oauthlib (1.3.0+ds-1) ... Setting up pybuild-plugin-pyproject (5.20230130) ... Setting up r-cran-httpuv (1.6.9+dfsg-1) ... Setting up python3-s3transfer (0.6.0-1) ... Setting up r-cran-fontawesome (0.5.0-1) ... Setting up python3-cwl-utils (0.22-1) ... Setting up cwltool (3.1.20230209161050-1) ... Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... Setting up python3-msrest (0.6.21-2) ... Setting up r-cran-bslib (0.4.2+dfsg-1) ... Setting up python3-boto3 (1.26.27+dfsg-1) ... Setting up python3-msrestazure (0.6.4-2) ... Setting up r-cran-shiny (1.7.4+dfsg-2) ... Setting up r-cran-rmarkdown (2.20+dfsg-1) ... Setting up python3-azure (20230112+git-1) ... Setting up python3-azure-storage (20230112+git-1) ... Setting up python3-smart-open (5.2.1-5) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.19+dfsg-6) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.80+dfsg-4+b1) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.19+dfsg-6) ... Setting up python3-sphinx (5.3.0-4) ... Setting up python3-sphinx-rtd-theme (1.2.0+dfsg-1) ... Setting up python3-recommonmark (0.7.1+ds-5) ... Setting up python3-sphinx-argparse (0.3.2-1) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/snakemake-7.21.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../snakemake_7.21.0-1_source.changes dpkg-buildpackage: info: source package snakemake dpkg-buildpackage: info: source version 7.21.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Rebecca N. Palmer dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/snakemake-7.21.0' dh_auto_clean find . -name '__pycache__' | xargs -r rm -r rm -rf .snakemake snakemake.egg-info make[1]: Leaving directory '/build/snakemake-7.21.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:107: Building wheel for python3.11 with "build" module I: pybuild base:240: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/script.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/stats.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/flux.py -> build/lib/snakemake/executors copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors copying snakemake/executors/common.py -> build/lib/snakemake/executors creating build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote creating build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common creating build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment creating build/lib/snakemake/caching copying snakemake/caching/remote.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching creating build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_jobstep.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/__init__.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_submit.py -> build/lib/snakemake/executors/slurm creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates creating build/lib/snakemake/report/data copying snakemake/report/data/rules.py -> build/lib/snakemake/report/data copying snakemake/report/data/rulegraph.py -> build/lib/snakemake/report/data copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data copying snakemake/report/data/runtimes.py -> build/lib/snakemake/report/data copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data copying snakemake/report/data/results.py -> build/lib/snakemake/report/data copying snakemake/report/data/__init__.py -> build/lib/snakemake/report/data copying snakemake/report/data/common.py -> build/lib/snakemake/report/data creating build/lib/snakemake/report/template copying snakemake/report/template/__init__.py -> build/lib/snakemake/report/template creating build/lib/snakemake/report/template/components copying snakemake/report/template/components/__init__.py -> build/lib/snakemake/report/template/components copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/report/template/style.css -> build/lib/snakemake/report/template copying snakemake/report/template/index.html.jinja2 -> build/lib/snakemake/report/template copying snakemake/report/template/logo.svg -> build/lib/snakemake/report/template copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/content.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/category.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_menu.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/icon.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '7.21.0' installing to build/bdist.linux-i386/wheel running install running install_lib creating build/bdist.linux-i386 creating build/bdist.linux-i386/wheel creating build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/script.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-i386/wheel/snakemake creating build/bdist.linux-i386/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-i386/wheel/snakemake/executors copying build/lib/snakemake/executors/flux.py -> build/bdist.linux-i386/wheel/snakemake/executors copying build/lib/snakemake/executors/ga4gh_tes.py -> build/bdist.linux-i386/wheel/snakemake/executors creating build/bdist.linux-i386/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_jobstep.py -> build/bdist.linux-i386/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/__init__.py -> build/bdist.linux-i386/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_submit.py -> build/bdist.linux-i386/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-i386/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences.py -> build/bdist.linux-i386/wheel/snakemake/executors copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-i386/wheel/snakemake/executors copying build/lib/snakemake/executors/common.py -> build/bdist.linux-i386/wheel/snakemake/executors copying build/lib/snakemake/exceptions.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-i386/wheel/snakemake creating build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-i386/wheel/snakemake/remote copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/report.css -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-i386/wheel/snakemake creating build/bdist.linux-i386/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-i386/wheel/snakemake/common copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-i386/wheel/snakemake/common creating build/bdist.linux-i386/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-i386/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-i386/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-i386/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-i386/wheel/snakemake/linting creating build/bdist.linux-i386/wheel/snakemake/unit_tests creating build/bdist.linux-i386/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-i386/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-i386/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-i386/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-i386/wheel/snakemake/unit_tests creating build/bdist.linux-i386/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-i386/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-i386/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-i386/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-i386/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-i386/wheel/snakemake/deployment copying build/lib/snakemake/__main__.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-i386/wheel/snakemake creating build/bdist.linux-i386/wheel/snakemake/caching copying build/lib/snakemake/caching/remote.py -> build/bdist.linux-i386/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-i386/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-i386/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-i386/wheel/snakemake/caching copying build/lib/snakemake/wrapper.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/stats.py -> build/bdist.linux-i386/wheel/snakemake creating build/bdist.linux-i386/wheel/snakemake/report creating build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rules.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rulegraph.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/runtimes.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/__init__.py -> build/bdist.linux-i386/wheel/snakemake/report/data copying build/lib/snakemake/report/data/common.py -> build/bdist.linux-i386/wheel/snakemake/report/data creating build/bdist.linux-i386/wheel/snakemake/report/template creating build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/content.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/category.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_results.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_menu.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_info.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/icon.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_info.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-i386/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/logo.svg -> build/bdist.linux-i386/wheel/snakemake/report/template copying build/lib/snakemake/report/template/style.css -> build/bdist.linux-i386/wheel/snakemake/report/template copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-i386/wheel/snakemake/report/template copying build/lib/snakemake/report/template/__init__.py -> build/bdist.linux-i386/wheel/snakemake/report/template copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-i386/wheel/snakemake/report copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-i386/wheel/snakemake/report copying build/lib/snakemake/__init__.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-i386/wheel/snakemake creating build/bdist.linux-i386/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-i386/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-i386/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-i386/wheel/snakemake/template_rendering copying build/lib/snakemake/io.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-i386/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-i386/wheel/snakemake running install_egg_info running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-i386/wheel/snakemake-7.21.0.egg-info running install_scripts creating build/bdist.linux-i386/wheel/snakemake-7.21.0.dist-info/WHEEL creating '/build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/.tmp-q_wgk3_4/snakemake-7.21.0-py3-none-any.whl' and adding 'build/bdist.linux-i386/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/io.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/script.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/stats.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/remote.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/common.py' adding 'snakemake/executors/flux.py' adding 'snakemake/executors/ga4gh_tes.py' adding 'snakemake/executors/google_lifesciences.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/slurm/__init__.py' adding 'snakemake/executors/slurm/slurm_jobstep.py' adding 'snakemake/executors/slurm/slurm_submit.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/data/__init__.py' adding 'snakemake/report/data/categories.py' adding 'snakemake/report/data/common.py' adding 'snakemake/report/data/packages.py' adding 'snakemake/report/data/results.py' adding 'snakemake/report/data/rulegraph.py' adding 'snakemake/report/data/rules.py' adding 'snakemake/report/data/runtimes.py' adding 'snakemake/report/data/timeline.py' adding 'snakemake/report/template/__init__.py' adding 'snakemake/report/template/index.html.jinja2' adding 'snakemake/report/template/logo.svg' adding 'snakemake/report/template/style.css' adding 'snakemake/report/template/components/__init__.py' adding 'snakemake/report/template/components/abstract_menu.js' adding 'snakemake/report/template/components/abstract_results.js' adding 'snakemake/report/template/components/app.js' adding 'snakemake/report/template/components/breadcrumbs.js' adding 'snakemake/report/template/components/button.js' adding 'snakemake/report/template/components/category.js' adding 'snakemake/report/template/components/common.js' adding 'snakemake/report/template/components/content.js' adding 'snakemake/report/template/components/icon.js' adding 'snakemake/report/template/components/list_heading.js' adding 'snakemake/report/template/components/list_item.js' adding 'snakemake/report/template/components/menu.js' adding 'snakemake/report/template/components/navbar.js' adding 'snakemake/report/template/components/report_info.js' adding 'snakemake/report/template/components/result_info.js' adding 'snakemake/report/template/components/result_view_button.js' adding 'snakemake/report/template/components/rule_graph.js' adding 'snakemake/report/template/components/rule_info.js' adding 'snakemake/report/template/components/search_results.js' adding 'snakemake/report/template/components/stats.js' adding 'snakemake/report/template/components/subcategory.js' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-7.21.0.dist-info/AUTHORS.rst' adding 'snakemake-7.21.0.dist-info/LICENSE.md' adding 'snakemake-7.21.0.dist-info/METADATA' adding 'snakemake-7.21.0.dist-info/WHEEL' adding 'snakemake-7.21.0.dist-info/entry_points.txt' adding 'snakemake-7.21.0.dist-info/top_level.txt' adding 'snakemake-7.21.0.dist-info/RECORD' removing build/bdist.linux-i386/wheel Successfully built snakemake-7.21.0-py3-none-any.whl I: pybuild plugin_pyproject:119: Unpacking wheel built for python3.11 with "installer" module debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/snakemake-7.21.0' PYTHONPATH=/build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build \ LC_ALL=C.UTF-8 LANGUAGE=C.UTF-8 python3 setup.py build_sphinx running build_sphinx Running Sphinx v5.3.0 making output directory... done building [mo]: targets for 0 po files that are out of date building [html]: targets for 37 source files that are out of date updating environment: [new config] 37 added, 0 changed, 0 removed reading sources... [ 2%] executing/caching reading sources... [ 5%] executing/cli reading sources... [ 8%] executing/cloud reading sources... [ 10%] executing/cluster reading sources... [ 13%] executing/grouping reading sources... [ 16%] executing/interoperability reading sources... [ 18%] executing/monitoring reading sources... [ 21%] executor_tutorial/azure_aks reading sources... [ 24%] executor_tutorial/flux reading sources... [ 27%] executor_tutorial/google_lifesciences reading sources... [ 29%] executor_tutorial/tutorial reading sources... [ 32%] getting_started/installation reading sources... [ 35%] index reading sources... [ 37%] project_info/authors reading sources... [ 40%] project_info/citations reading sources... [ 43%] project_info/contributing reading sources... [ 45%] project_info/faq reading sources... [ 48%] project_info/history reading sources... [ 51%] project_info/license reading sources... [ 54%] project_info/more_resources reading sources... [ 56%] snakefiles/best_practices reading sources... [ 59%] snakefiles/configuration reading sources... [ 62%] snakefiles/deployment reading sources... [ 64%] snakefiles/foreign_wms reading sources... [ 67%] snakefiles/modularization reading sources... [ 70%] snakefiles/remote_files reading sources... [ 72%] snakefiles/reporting reading sources... [ 75%] snakefiles/rules reading sources... [ 78%] snakefiles/testing reading sources... [ 81%] snakefiles/utils reading sources... [ 83%] snakefiles/writing_snakefiles reading sources... [ 86%] tutorial/additional_features reading sources... [ 89%] tutorial/advanced reading sources... [ 91%] tutorial/basics reading sources... [ 94%] tutorial/setup reading sources... [ 97%] tutorial/short reading sources... [100%] tutorial/tutorial /build/snakemake-7.21.0/docs/executing/cli.rst:182: ERROR: Unknown directive type "argparse". .. argparse:: :module: snakemake :func: get_argument_parser :prog: snakemake All command line options can be printed by calling ``snakemake -h``. /build/snakemake-7.21.0/docs/executing/cli.rst:111: WARNING: duplicate label profiles, other instance in /build/snakemake-7.21.0/docs/executing/cli.rst /build/snakemake-7.21.0/docs/executing/cloud.rst:233: WARNING: duplicate label machine types, other instance in /build/snakemake-7.21.0/docs/executing/cloud.rst /build/snakemake-7.21.0/docs/executing/cluster.rst:13: WARNING: Title overline too short. -------------- Executing on SLURM clusters -------------- /build/snakemake-7.21.0/docs/executing/monitoring.rst:5: WARNING: duplicate label monitoring, other instance in /build/snakemake-7.21.0/docs/executing/monitoring.rst /build/snakemake-7.21.0/docs/executor_tutorial/azure_aks.rst:184: ERROR: Unexpected indentation. /build/snakemake-7.21.0/docs/executor_tutorial/flux.rst:13: WARNING: duplicate label setup, other instance in /build/snakemake-7.21.0/docs/executor_tutorial/azure_aks.rst /build/snakemake-7.21.0/docs/executor_tutorial/google_lifesciences.rst:13: WARNING: duplicate label setup, other instance in /build/snakemake-7.21.0/docs/executor_tutorial/flux.rst /build/snakemake-7.21.0/docs/index.rst:5: WARNING: Duplicate explicit target name: "bioconda". /build/snakemake-7.21.0/docs/index.rst:: WARNING: duplicate label execution, other instance in /build/snakemake-7.21.0/docs/executing/cloud.rst /build/snakemake-7.21.0/docs/index.rst:64: WARNING: duplicate label resources, other instance in /build/snakemake-7.21.0/docs/executor_tutorial/flux.rst /build/snakemake-7.21.0/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/project_info/faq.rst:688: WARNING: Title underline too short. How can I avoid system /tmp to be used when combining singularity and conda? ------------------------------------------------------ /build/snakemake-7.21.0/docs/project_info/faq.rst:688: WARNING: Title underline too short. How can I avoid system /tmp to be used when combining singularity and conda? ------------------------------------------------------ /build/snakemake-7.21.0/docs/snakefiles/best_practices.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/snakefiles/configuration.rst:52: WARNING: malformed hyperlink target. /build/snakemake-7.21.0/docs/snakefiles/configuration.rst:5: WARNING: duplicate label configuration, other instance in /build/snakemake-7.21.0/docs/executing/cloud.rst /build/snakemake-7.21.0/docs/snakefiles/configuration.rst:74: WARNING: duplicate label environment variables, other instance in /build/snakemake-7.21.0/docs/executing/cloud.rst /build/snakemake-7.21.0/docs/snakefiles/modularization.rst:7: WARNING: Duplicate explicit target name: "cwl". /build/snakemake-7.21.0/docs/snakefiles/remote_files.rst:644: WARNING: Inline literal start-string without end-string. /build/snakemake-7.21.0/docs/snakefiles/reporting.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/snakefiles/reporting.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/snakefiles/rules.rst:5: WARNING: Duplicate explicit target name: "humanfriendly package". /build/snakemake-7.21.0/docs/snakefiles/rules.rst:5: WARNING: Duplicate explicit target name: "here". /build/snakemake-7.21.0/docs/snakefiles/rules.rst:1238: WARNING: malformed hyperlink target. /build/snakemake-7.21.0/docs/snakefiles/rules.rst:320: WARNING: duplicate label resources, other instance in /build/snakemake-7.21.0/docs/index.rst /build/snakemake-7.21.0/docs/snakefiles/rules.rst:1372: WARNING: duplicate label job properties, other instance in /build/snakemake-7.21.0/docs/executing/cluster.rst /build/snakemake-7.21.0/docs/tutorial/additional_features.rst:73: WARNING: duplicate label modularization, other instance in /build/snakemake-7.21.0/docs/snakefiles/modularization.rst 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other instance in /build/snakemake-7.21.0/docs/tutorial/short.rst looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... 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[100%] tutorial/tutorial /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/executing/cluster.rst:65: WARNING: undefined label: 'snakefiles-mpi' /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:45: WARNING: undefined label: 'changelog' /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/snakefiles/best_practices.rst:22: WARNING: undefined label: 'snakefiles_tabular_configuration' /build/snakemake-7.21.0/docs/snakefiles/best_practices.rst:22: WARNING: undefined label: 'snakefiles_peps' /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/snakefiles/configuration.rst:32: WARNING: undefined label: 'api_reference_snakemake' /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/snakefiles/foreign_wms.rst:30: WARNING: undefined label: 'snakefiles-local-rule' /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 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/build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/tutorial/basics.rst:392: WARNING: undefined label: '.. _snakefiles-rules' /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated generating indices... genindex /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated done writing additional pages... search /build/snakemake-7.21.0/docs/index.rst:134: WARNING: toctree contains reference to document 'project_info/history' that doesn't have a title: no link will be generated done copying images... [ 14%] executor_tutorial/workflow/upload-google-storage.png copying images... [ 28%] executor_tutorial/workflow/quals.svg copying images... [ 42%] executor_tutorial/workflow/results-google-storage.png copying images... [ 57%] project_info/img/idea.png copying images... [ 71%] snakefiles/images/snakemake-notebook-demo.gif copying images... [ 85%] tutorial/workflow/dag_index.png copying images... [100%] tutorial/workflow/dag_call.png copying downloadable files... [ 50%] ../tests/test_report/custom-stylesheet.css copying downloadable files... [100%] ../tests/test_report/expected-results/report.html copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 107 warnings. The HTML pages are in build/sphinx/html. make[1]: Leaving directory '/build/snakemake-7.21.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/snakemake-7.21.0' . /etc/profile.d/modules.sh && PYBUILD_SYSTEM=custom dh_auto_test I: pybuild pybuild:307: chmod +x /build/snakemake-7.21.0/bin/snakemake; cp -r /build/snakemake-7.21.0/bin /build/snakemake-7.21.0/tests /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build I: pybuild base:240: python3.11 -m pytest -v /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/tests/test*.py -k 'not test_cwl and not test_cwl_singularity and not test_url_include and not test_wrapper and not test_issue1083 and not test_github_issue78 and not test_container and not test_singularity and not test_singularity_conda and not test_convert_to_cwl and not test_report and not test_report_zip and not test_archive and not test_jupyter_notebook and not test_conda and not test_upstream_conda and not test_conda_custom_prefix and not test_script and not test_issue635 and not test_issue1093 and not test_default_resources and not test_default_remote and not test_remote and not test_output_file_cache_remote and not test_tibanna and not test_module_complex and not test_module_complex2 and not test_module_with_script and not test_module_report and not test_modules_meta_wrapper and not test_tes and not test_deploy_script and not test_deploy_hashing and not test_peppy and not test_modules_peppy and not test_report_display_code and not test_wrapper_local_git_prefix and not test_template_engine and not test_github_issue1396 and not test_modules_prefix and not test_ancient and not test_github_issue1062 and not test_symlink_time_handling and not test_env_modules and not test_github_issue1460 and not test_rule_inheritance_globals' ============================= test session starts ============================== platform linux -- Python 3.11.2, pytest-7.2.1, pluggy-1.0.0+repack -- /usr/bin/python3.11 cachedir: .pytest_cache 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.pybuild/cpython3_3.11_snakemake/build/snakemake/workflow.py:1256 /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/snakemake/workflow.py:1256: DeprecationWarning: invalid escape sequence '\d' self.global_wildcard_constraints(scatteritem="\d+-of-\d+") .pybuild/cpython3_3.11_snakemake/build/snakemake/rules.py:14 /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/snakemake/rules.py:14: DeprecationWarning: module 'sre_constants' is deprecated import sre_constants .pybuild/cpython3_3.11_snakemake/build/snakemake/sourcecache.py:350 /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/snakemake/sourcecache.py:350: DeprecationWarning: invalid escape sequence '\d' "https://raw.githubusercontent.com/snakemake/snakemake-wrappers/\d+\.\d+.\d+" .pybuild/cpython3_3.11_snakemake/build/snakemake/deployment/conda.py:763 /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/snakemake/deployment/conda.py:763: DeprecationWarning: invalid escape sequence '\d' version_matches = re.findall("\d+.\d+.\d+", version) .pybuild/cpython3_3.11_snakemake/build/tests/testapi.py::test_lockexception /usr/lib/python3/dist-packages/_pytest/python.py:199: PytestReturnNotNoneWarning: Expected None, but .pybuild/cpython3_3.11_snakemake/build/tests/testapi.py::test_lockexception returned True, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( .pybuild/cpython3_3.11_snakemake/build/tests/tests.py::test_validate /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/snakemake/utils.py:100: DeprecationWarning: The metaschema specified by $schema was not found. Using the latest draft to validate, but this will raise an error in the future. Validator = validators.validator_for(schema) .pybuild/cpython3_3.11_snakemake/build/tests/tests.py::test_linting /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/snakemake/linting/rules.py:113: DeprecationWarning: invalid escape sequence '\[' def lint_iofile_by_index(self, rule, regex=re.compile("(input|output)\[[0-9]+\]")): .pybuild/cpython3_3.11_snakemake/build/tests/tests.py::test_linting /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/snakemake/linting/snakefiles.py:70: DeprecationWarning: invalid escape sequence '\[' regex=re.compile("os.environ\[(?P['\"])(?P.+)?(?P=quote)\]"), -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html = 247 passed, 44 skipped, 88 deselected, 1 xfailed, 9 warnings in 1259.64s (0:20:59) = I: pybuild pybuild:333: rm -fr /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/bin /build/snakemake-7.21.0/.pybuild/cpython3_3.11_snakemake/build/tests make[1]: Leaving directory '/build/snakemake-7.21.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:161: Copying package built for python3.11 to destdir dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/snakemake-7.21.0' find debian -name '__pycache__' -o name '.gitignore' | xargs rm -rf find: paths must precede expression: `name' make[1]: Leaving directory '/build/snakemake-7.21.0' dh_sphinxdoc -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package snakemake-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'snakemake-doc' in '../snakemake-doc_7.21.0-1_all.deb'. dpkg-deb: building package 'snakemake' in '../snakemake_7.21.0-1_all.deb'. dpkg-genbuildinfo --build=binary -O../snakemake_7.21.0-1_i386.buildinfo dpkg-genchanges --build=binary -O../snakemake_7.21.0-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem W: Stray processes left from build: * system-pbuilder-build-snakemake_7.21.0\x2d1-123578.slice Loaded: loaded Active: active since Mon 2024-05-20 17:05:47 -12; 24min ago Tasks: 1 Memory: 205.8M CPU: 8min 1.029s CGroup: /system.slice/system-pbuilder.slice/system-pbuilder-build.slice/system-pbuilder-build-snakemake_7.21.0\x2d1.slice/system-pbuilder-build-snakemake_7.21.0\x2d1-123578.slice `-run-rac0c3611f8ad47b68a11f1b22b258dfc.scope `-36942 /bin/bash -c set -euo pipefail; grep 0 < test.0.txt > test.0.out May 20 17:05:47 ionos6-i386 systemd[1]: Created slice system-pbuilder-build-snakemake_7.21.0\x2d1-123578.slice. I: cleaning the build env I: removing directory /srv/workspace/pbuilder/123578 and its subdirectories I: Current time: Mon May 20 17:30:15 -12 2024 I: pbuilder-time-stamp: 1716269415 Tue Apr 18 23:07:16 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos2-i386.debian.net. Tue Apr 18 23:07:16 UTC 2023 I: Preparing to do remote build '2' on ionos2-i386.debian.net. Tue Apr 18 23:42:21 UTC 2023 I: Deleting $TMPDIR on ionos2-i386.debian.net. Tue Apr 18 23:44:21 UTC 2023 I: snakemake_7.21.0-1_i386.changes: Format: 1.8 Date: Tue, 07 Feb 2023 21:19:40 +0000 Source: snakemake Binary: snakemake snakemake-doc Architecture: all Version: 7.21.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Rebecca N. Palmer Description: snakemake - pythonic workflow management system snakemake-doc - documentation for pythonic workflow management system Changes: snakemake (7.21.0-1) unstable; urgency=medium . * New upstream release. Refresh patches. Checksums-Sha1: af25d8e0bacd0b60397097cde605feab4dc05f06 4959972 snakemake-doc_7.21.0-1_all.deb e6920532d5cb7cf7a194a82c4ef8a6a0be6c8766 301468 snakemake_7.21.0-1_all.deb 6a982a67f2ec29d78ff6e1d255f3cd976c73a6dd 17026 snakemake_7.21.0-1_i386.buildinfo Checksums-Sha256: e111fcba1e75fc0f27a99478c186b1a05f742ffd61922cf6d2389bc03dd12879 4959972 snakemake-doc_7.21.0-1_all.deb 9c20c65785aee786ea6332a3194b68afabc378a46f585d597218bc870a96fec4 301468 snakemake_7.21.0-1_all.deb f3d4816745b3b304194132d898c42ba416d9ea1438294dff38633ce0be953d79 17026 snakemake_7.21.0-1_i386.buildinfo Files: db7fe304ffa1b90b989709fdbfc66166 4959972 doc optional snakemake-doc_7.21.0-1_all.deb 6ebcdc849d5c14eb9fcdb1b1fc0d0664 301468 science optional snakemake_7.21.0-1_all.deb 800c44a9cfc0b35795be2b4f0a9353db 17026 science optional snakemake_7.21.0-1_i386.buildinfo Tue Apr 18 23:44:22 UTC 2023 I: diffoscope 240 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.ZklnUQP5/snakemake_7.21.0-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.ZklnUQP5/snakemake_7.21.0-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.ZklnUQP5/snakemake_7.21.0-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.ZklnUQP5/b1/snakemake_7.21.0-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.ZklnUQP5/b2/snakemake_7.21.0-1_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.447s) 0.447s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.073s) 0.073s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Tue Apr 18 23:44:27 UTC 2023 I: diffoscope 240 found no differences in the changes files, and a .buildinfo file also exists. Tue Apr 18 23:44:27 UTC 2023 I: snakemake from bookworm built successfully and reproducibly on i386. Tue Apr 18 23:44:28 UTC 2023 I: Submitting .buildinfo files to external archives: Tue Apr 18 23:44:28 UTC 2023 I: Submitting 20K b1/snakemake_7.21.0-1_i386.buildinfo.asc Tue Apr 18 23:44:30 UTC 2023 I: Submitting 20K b2/snakemake_7.21.0-1_i386.buildinfo.asc Tue Apr 18 23:44:31 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Apr 18 23:44:31 UTC 2023 I: Done submitting .buildinfo files. Tue Apr 18 23:44:31 UTC 2023 I: Removing signed snakemake_7.21.0-1_i386.buildinfo.asc files: removed './b1/snakemake_7.21.0-1_i386.buildinfo.asc' removed './b2/snakemake_7.21.0-1_i386.buildinfo.asc'