Thu Jan 5 23:52:02 UTC 2023 I: starting to build bagel/bullseye/amd64 on jenkins on '2023-01-05 23:51' Thu Jan 5 23:52:02 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_5/6601/console.log Thu Jan 5 23:52:02 UTC 2023 I: Downloading source for bullseye/bagel=1.2.2-2 --2023-01-05 23:52:02-- http://cdn-fastly.deb.debian.org/debian/pool/main/b/bagel/bagel_1.2.2-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2246 (2.2K) [text/prs.lines.tag] Saving to: ‘bagel_1.2.2-2.dsc’ 0K .. 100% 167M=0s 2023-01-05 23:52:02 (167 MB/s) - ‘bagel_1.2.2-2.dsc’ saved [2246/2246] Thu Jan 5 23:52:02 UTC 2023 I: bagel_1.2.2-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: bagel Binary: bagel Architecture: alpha amd64 arm64 ia64 kfreebsd-amd64 mips64el ppc64 ppc64el riscv64 s390x sparc64 Version: 1.2.2-2 Maintainer: Debichem Team Uploaders: Michael Banck , Graham Inggs Homepage: http://www.nubakery.org/ Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/debichem-team/bagel Vcs-Git: https://salsa.debian.org/debichem-team/bagel.git Testsuite: autopkgtest Build-Depends: debhelper (>= 12~), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python3-dev Package-List: bagel deb science optional arch=alpha,amd64,arm64,ia64,kfreebsd-amd64,mips64el,ppc64,ppc64el,riscv64,s390x,sparc64 Checksums-Sha1: e54adbfca037d1c7beaf52c0a8ffb0d0bb9f8696 41551016 bagel_1.2.2.orig.tar.gz 45df5ce388f58968e4af92233460dbd20a5bc3c4 7440 bagel_1.2.2-2.debian.tar.xz Checksums-Sha256: b9ef9ad5ad9b836b5393badb5a3e5b162d6ff32da497f69d05ef9e4d091b558a 41551016 bagel_1.2.2.orig.tar.gz fbb13a1c60656cc10cc10a9c00d264fc3ca8b00222bd635afb9682133c3f7add 7440 bagel_1.2.2-2.debian.tar.xz Files: 5dd54b064188771ccf6dd19fe08204da 41551016 bagel_1.2.2.orig.tar.gz 048f54d56060a3273dc8cf6e4ffdec39 7440 bagel_1.2.2-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEnKh3dJ+rLk+paGLs3GhqJ7Q0gbAFAmBLY34ACgkQ3GhqJ7Q0 gbBtgA//afvJ0FosMKsJpmHNRgF0t6T7KJNA1Q6pcY28j/fOKS0FEJ3VzbsrJjCS b/r0PeOhv+RVhYNlSvTukc8wiKSAUihY3s8ILjx3JloEWF0JLH6Guz7+6wtebr+3 uZF1rWVBMtoCOaZceB30iQYigfc2kA91SL4mxoPKP3KmIEBXHIp/DszcyQytrgH2 rONtVWy2PMB1UnwdWIJOztq0W87AzMdd5pT2hg4YDXQ91zaO4HH55PWWghL5uODP e9b2l2rwhj1IiSzP+KR4yUS0a2XG5tA0Iykm32H/Y2OwkBYE5qrL9xfqaavY+pSS g1j2sTFuEA0dajEKJ4HwFHiCLKH+UlRd3nmdcONuCfbB9ValvvL4teNE1ccsEiJ7 V0j0Mh7trwirQfi+xzXZ3L3M3mVTwB6leLoYjRrGjpjfl5F7+3SgPbtbRSBkrXLK FmJMXBS186vwEz4BtSHITbu2kjAyjLykimwcpDaBjqI9GtNMq6dQV+XVQosdcxWl JjiKlyBpJXI3sHJF9JZvFU8uPMO1QZYSkzflmjRz9/Err/HDSB3ayZGZVXgp7bJd WjlGtJtqVVh2ZRcvYZ1pulmaTVe5M/4BorK7WkT6Wys64DbKtkADbovnzIDNin6W vHuvOJ1klv4F4eXFvUEeL/GinY4X+Kz/WDnmoiY3Tl0d59mxutI= =1q2E -----END PGP SIGNATURE----- Thu Jan 5 23:52:02 UTC 2023 I: Checking whether the package is not for us Thu Jan 5 23:52:02 UTC 2023 I: Starting 1st build on remote node ionos11-amd64.debian.net. Thu Jan 5 23:52:02 UTC 2023 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Fri Jan 6 04:27:38 UTC 2023 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jan 5 11:52:04 -12 2023 I: pbuilder-time-stamp: 1672962724 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [bagel_1.2.2-2.dsc] I: copying [./bagel_1.2.2.orig.tar.gz] I: copying [./bagel_1.2.2-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.bzgHaaYv/trustedkeys.kbx': General error gpgv: Signature made Fri Mar 12 00:50:06 2021 -12 gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./bagel_1.2.2-2.dsc dpkg-source: info: extracting bagel in bagel-1.2.2 dpkg-source: info: unpacking bagel_1.2.2.orig.tar.gz dpkg-source: info: unpacking bagel_1.2.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying skip_failing_testcases.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/516309/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' DISTRIBUTION='bullseye' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='aca15e9769ca4d1a9cb9f955da2d8769' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='516309' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.sGhRU8OE/pbuilderrc_VlYe --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.sGhRU8OE/b1 --logfile b1/build.log bagel_1.2.2-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 5.10.0-20-amd64 #1 SMP Debian 5.10.158-2 (2022-12-13) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 69032 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Jan 20 2022 more -rwsr-xr-x 1 root root 55528 Jan 20 2022 mount -rwxr-xr-x 1 root root 18664 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Dec 20 21:25 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Jan 20 2022 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jan 20 2022 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/516309/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 12~), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python3-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dh-autoreconf; however: Package dh-autoreconf is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-python-dev; however: Package libboost-python-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-regex-dev; however: Package libboost-regex-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-test-dev; however: Package libboost-test-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libmpich-dev; however: Package libmpich-dev is not installed. pbuilder-satisfydepends-dummy depends on libxc-dev; however: Package libxc-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} hwloc-nox{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libboost-python-dev{a} libboost-python1.74-dev{a} libboost-python1.74.0{a} libboost-regex-dev{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-serialization-dev{a} libboost-serialization1.74-dev{a} libboost-serialization1.74.0{a} libboost-test-dev{a} libboost-test1.74-dev{a} libboost-test1.74.0{a} libboost1.74-dev{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran-10-dev{a} libgfortran5{a} libhwloc15{a} libicu-dev{a} libicu67{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack-dev{a} liblapack3{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libmpich-dev{a} libmpich12{a} libpipeline1{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libslurm36{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxc-dev{a} libxc5{a} libxml2{a} m4{a} man-db{a} media-types{a} mpich{a} po-debconf{a} python3{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libhwloc-plugins libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 86 newly installed, 0 to remove and 0 not upgraded. Need to get 82.9 MB of archives. After unpacking 478 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8+deb11u1 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u3 [693 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 libgfortran-10-dev amd64 10.2.1-6 [769 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 gfortran-10 amd64 10.2.1-6 [9447 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 gfortran amd64 4:10.2.1-1 [1428 B] Get: 48 http://deb.debian.org/debian bullseye/main amd64 libhwloc15 amd64 2.4.1+dfsg-1 [150 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 hwloc-nox amd64 2.4.1+dfsg-1 [190 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 icu-devtools amd64 67.1-7 [201 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3 [153 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 libblas-dev amd64 3.9.0-3 [161 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 libboost1.74-dev amd64 1.74.0-9 [9534 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 libboost-python1.74.0 amd64 1.74.0-9 [313 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 libpython3.9 amd64 3.9.2-1 [1691 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 libexpat1-dev amd64 2.2.10-2+deb11u5 [141 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-dev amd64 3.9.2-1 [4028 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 libpython3-dev amd64 3.9.2-3 [21.7 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2+deb11u2 [191 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 python3.9-dev amd64 3.9.2-1 [515 kB] Get: 61 http://deb.debian.org/debian bullseye/main amd64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 python3-distutils all 3.9.2-1 [143 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 66 http://deb.debian.org/debian bullseye/main amd64 python3-dev amd64 3.9.2-3 [24.8 kB] Get: 67 http://deb.debian.org/debian bullseye/main amd64 libboost-python1.74-dev amd64 1.74.0-9 [336 kB] Get: 68 http://deb.debian.org/debian bullseye/main amd64 libboost-python-dev amd64 1.74.0.3 [4632 B] Get: 69 http://deb.debian.org/debian bullseye/main amd64 libboost-regex1.74.0 amd64 1.74.0-9 [516 kB] Get: 70 http://deb.debian.org/debian bullseye/main amd64 libicu-dev amd64 67.1-7 [9597 kB] Get: 71 http://deb.debian.org/debian bullseye/main amd64 libboost-regex1.74-dev amd64 1.74.0-9 [588 kB] Get: 72 http://deb.debian.org/debian bullseye/main amd64 libboost-regex-dev amd64 1.74.0.3 [4600 B] Get: 73 http://deb.debian.org/debian bullseye/main amd64 libboost-serialization1.74.0 amd64 1.74.0-9 [340 kB] Get: 74 http://deb.debian.org/debian bullseye/main amd64 libboost-serialization1.74-dev amd64 1.74.0-9 [383 kB] Get: 75 http://deb.debian.org/debian bullseye/main amd64 libboost-serialization-dev amd64 1.74.0.3 [4560 B] Get: 76 http://deb.debian.org/debian bullseye/main amd64 libboost-test1.74.0 amd64 1.74.0-9 [472 kB] Get: 77 http://deb.debian.org/debian bullseye/main amd64 libboost-test1.74-dev amd64 1.74.0-9 [547 kB] Get: 78 http://deb.debian.org/debian bullseye/main amd64 libboost-test-dev amd64 1.74.0.3 [4368 B] Get: 79 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3 [2166 kB] Get: 80 http://deb.debian.org/debian bullseye/main amd64 liblapack-dev amd64 3.9.0-3 [4247 kB] Get: 81 http://deb.debian.org/debian bullseye/main amd64 libmpich12 amd64 3.4.1-5~deb11u1 [1987 kB] Get: 82 http://deb.debian.org/debian bullseye/main amd64 libslurm36 amd64 20.11.7+really20.11.4-2+deb11u1 [667 kB] Get: 83 http://deb.debian.org/debian bullseye/main amd64 mpich amd64 3.4.1-5~deb11u1 [219 kB] Get: 84 http://deb.debian.org/debian bullseye/main amd64 libmpich-dev amd64 3.4.1-5~deb11u1 [2343 kB] Get: 85 http://deb.debian.org/debian bullseye/main amd64 libxc5 amd64 4.3.4-2 [2001 kB] Get: 86 http://deb.debian.org/debian bullseye/main amd64 libxc-dev amd64 4.3.4-2 [3633 kB] Fetched 82.9 MB in 13s (6537 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8+deb11u1_amd64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../1-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. 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Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20992 files and directories currently installed.) Preparing to unpack .../00-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... 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Unpacking libslurm36 (20.11.7+really20.11.4-2+deb11u1) ... Selecting previously unselected package mpich. Preparing to unpack .../66-mpich_3.4.1-5~deb11u1_amd64.deb ... Unpacking mpich (3.4.1-5~deb11u1) ... Selecting previously unselected package libmpich-dev:amd64. Preparing to unpack .../67-libmpich-dev_3.4.1-5~deb11u1_amd64.deb ... Unpacking libmpich-dev:amd64 (3.4.1-5~deb11u1) ... Selecting previously unselected package libxc5:amd64. Preparing to unpack .../68-libxc5_4.3.4-2_amd64.deb ... Unpacking libxc5:amd64 (4.3.4-2) ... Selecting previously unselected package libxc-dev. Preparing to unpack .../69-libxc-dev_4.3.4-2_amd64.deb ... Unpacking libxc-dev (4.3.4-2) ... Setting up media-types (4.0.0) ... Setting up libslurm36 (20.11.7+really20.11.4-2+deb11u1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libboost1.74-dev:amd64 (1.74.0-9) ... Setting up bsdextrautils (2.36.1-8+deb11u1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:amd64 (3.9.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.2.10-2+deb11u5) ... Setting up libboost-test1.74.0:amd64 (1.74.0-9) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up libboost-regex1.74.0:amd64 (1.74.0-9) ... Setting up libhwloc15:amd64 (2.4.1+dfsg-1) ... Setting up autopoint (0.21-4) ... Setting up icu-devtools (67.1-7) ... Setting up libgfortran5:amd64 (10.2.1-6) ... Setting up libboost-serialization1.74.0:amd64 (1.74.0-9) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2+deb11u2) ... Setting up libmpich12:amd64 (3.4.1-5~deb11u1) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libmpdec3:amd64 (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgfortran-10-dev:amd64 (10.2.1-6) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libboost-python1.74.0 (1.74.0-9) ... Setting up libboost-test1.74-dev:amd64 (1.74.0-9) ... Setting up libelf1:amd64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libicu-dev:amd64 (67.1-7) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7+deb11u3) ... Setting up libblas-dev:amd64 (3.9.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up liblapack3:amd64 (3.9.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libxc5:amd64 (4.3.4-2) ... Setting up libreadline8:amd64 (8.1-1) ... Setting up hwloc-nox (2.4.1+dfsg-1) ... Setting up libxc-dev (4.3.4-2) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libboost-test-dev:amd64 (1.74.0.3) ... Setting up liblapack-dev:amd64 (3.9.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up gfortran-10 (10.2.1-6) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up autoconf (2.69-14) ... Setting up libboost-serialization1.74-dev:amd64 (1.74.0-9) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up libboost-regex1.74-dev:amd64 (1.74.0-9) ... Setting up groff-base (1.22.4-6) ... Setting up libboost-regex-dev:amd64 (1.74.0.3) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up mpich (3.4.1-5~deb11u1) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up dh-autoreconf (20) ... Setting up libpython3.9:amd64 (3.9.2-1) ... Setting up libmpich-dev:amd64 (3.4.1-5~deb11u1) ... update-alternatives: using /usr/include/x86_64-linux-gnu/mpich to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libboost-serialization-dev:amd64 (1.74.0.3) ... Setting up python3.9 (3.9.2-1) ... Setting up libpython3.9-dev:amd64 (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up python3.9-dev (3.9.2-1) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-distutils (3.9.2-1) ... Setting up libpython3-dev:amd64 (3.9.2-3) ... Setting up python3-dev (3.9.2-3) ... Setting up libboost-python1.74-dev (1.74.0-9) ... Setting up libboost-python-dev (1.74.0.3) ... Processing triggers for libc-bin (2.31-13+deb11u5) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/bagel-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../bagel_1.2.2-2_source.changes dpkg-buildpackage: info: source package bagel dpkg-buildpackage: info: source version 1.2.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael Banck dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --max-parallel=1 --with autoreconf debian/rules override_dh_auto_clean make[1]: Entering directory '/build/bagel-1.2.2' dh_auto_clean rm -rf /build/bagel-1.2.2/src/testsuite make[1]: Leaving directory '/build/bagel-1.2.2' dh_autoreconf_clean -O--max-parallel=1 dh_clean -O--max-parallel=1 debian/rules build dh build --max-parallel=1 --with autoreconf dh_update_autotools_config -O--max-parallel=1 dh_autoreconf -O--max-parallel=1 libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:17: installing './compile' configure.ac:39: installing './config.guess' configure.ac:39: installing './config.sub' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' Makefile.am: installing './INSTALL' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/bagel-1.2.2' if [ -f /proc/meminfo ]; then cat /proc/meminfo; fi MemTotal: 49332132 kB MemFree: 21964356 kB MemAvailable: 22601404 kB Buffers: 16368 kB Cached: 20977192 kB SwapCached: 556984 kB Active: 18560484 kB Inactive: 3156692 kB Active(anon): 18176216 kB Inactive(anon): 3085684 kB Active(file): 384268 kB Inactive(file): 71008 kB Unevictable: 64 kB Mlocked: 64 kB SwapTotal: 205520888 kB SwapFree: 193893704 kB Dirty: 224 kB Writeback: 0 kB AnonPages: 173888 kB Mapped: 70544 kB Shmem: 20538284 kB KReclaimable: 778172 kB Slab: 1723156 kB SReclaimable: 778172 kB SUnreclaim: 944984 kB KernelStack: 5568 kB PageTables: 4672 kB NFS_Unstable: 0 kB Bounce: 0 kB WritebackTmp: 0 kB CommitLimit: 230186952 kB Committed_AS: 32210988 kB VmallocTotal: 34359738367 kB VmallocUsed: 181964 kB VmallocChunk: 0 kB Percpu: 3520768 kB HardwareCorrupted: 0 kB AnonHugePages: 28672 kB ShmemHugePages: 0 kB ShmemPmdMapped: 0 kB FileHugePages: 0 kB FilePmdMapped: 0 kB HugePages_Total: 0 HugePages_Free: 0 HugePages_Rsvd: 0 HugePages_Surp: 0 Hugepagesize: 2048 kB Hugetlb: 0 kB DirectMap4k: 23545704 kB DirectMap2M: 24688640 kB DirectMap1G: 4194304 kB dh_auto_configure -- \ --datadir=/usr/share/bagel \ --libdir=/usr/lib/bagel \ --enable-static \ --disable-shared \ --with-boost \ --with-boost-libdir=/usr/lib/x86_64-linux-gnu \ --with-libxc=yes \ --with-mpi=openmpi \ --disable-scalapack \ --enable-smith ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --datadir=/usr/share/bagel --libdir=/usr/lib/bagel --enable-static --disable-shared --with-boost --with-boost-libdir=/usr/lib/x86_64-linux-gnu --with-libxc=yes --with-mpi=openmpi --disable-scalapack --enable-smith checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for python... no checking for python2... no checking for python3... /usr/bin/python3 checking for python version... 3.9 checking for python platform... linux checking for python script directory... ${prefix}/lib/python3.9/site-packages checking for python extension module directory... ${exec_prefix}/lib/python3.9/site-packages checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none ..openmpi requested.. checking for mpicc... mpicc checking for mpicxx... mpicxx checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) none checking whether we are using the GNU C++ compiler... (cached) yes checking whether mpicxx accepts -g... (cached) yes checking dependency style of mpicxx... (cached) none checking whether mpicxx supports C++11 features by default... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mpicc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... yes checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.53... yes checking whether the Boost::Regex library is available... yes checking for exit in -lboost_regex... yes checking whether the Boost::Unit_Test_Framework library is available... yes configure: WARNING: BOOST_CPPFLAGS -I/usr/include checking whether the Boost::Serialization library is available... yes checking for exit in -lboost_serialization... yes checking xc.h usability... yes checking xc.h presence... yes checking for xc.h... yes checking for main in -lxc... yes checking for zgemm3m_... no checking mpi.h usability... yes checking mpi.h presence... yes checking for mpi.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/util/input/Makefile config.status: creating src/util/io/Makefile config.status: creating src/util/parallel/Makefile config.status: creating src/util/math/Makefile config.status: creating src/asd/multisite/Makefile config.status: creating src/asd/dimer/Makefile config.status: creating src/asd/dmrg/Makefile config.status: creating src/asd/orbital/Makefile config.status: creating src/asd/Makefile config.status: creating src/wfn/Makefile config.status: creating src/grad/Makefile config.status: creating src/integral/Makefile config.status: creating src/scf/Makefile config.status: creating src/df/Makefile config.status: creating src/prop/Makefile config.status: creating src/smith/Makefile config.status: creating src/molecule/Makefile config.status: creating src/pt2/Makefile config.status: creating src/ci/Makefile config.status: creating src/ci/ciutil/Makefile config.status: creating src/ci/fci/Makefile config.status: creating src/ci/zfci/Makefile config.status: creating src/ci/ras/Makefile config.status: creating src/response/Makefile config.status: creating src/multi/Makefile config.status: creating src/multi/casscf/Makefile config.status: creating src/multi/zcasscf/Makefile config.status: creating src/mat1e/Makefile config.status: creating src/opt/Makefile config.status: creating src/basis/Makefile config.status: creating bagel_config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/bagel-1.2.2' dh_auto_build -O--max-parallel=1 make -j1 make[1]: Entering directory '/build/bagel-1.2.2' make all-recursive make[2]: Entering directory '/build/bagel-1.2.2' Making all in src make[3]: Entering directory '/build/bagel-1.2.2/src' Making all in util make[4]: Entering directory '/build/bagel-1.2.2/src/util' Making all in parallel make[5]: Entering directory '/build/bagel-1.2.2/src/util/parallel' /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o process.lo process.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c process.cc -o process.o /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o mpi_interface.lo mpi_interface.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c mpi_interface.cc -o mpi_interface.o /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o rmawindow.lo rmawindow.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c rmawindow.cc -o rmawindow.o /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o resources.lo resources.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c resources.cc -o resources.o /bin/bash ../../../libtool --tag=CXX --mode=link mpicxx -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o libbagel_parallel.la process.lo mpi_interface.lo rmawindow.lo resources.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_parallel.a process.o mpi_interface.o rmawindow.o resources.o libtool: link: ranlib .libs/libbagel_parallel.a libtool: link: ( cd ".libs" && rm -f "libbagel_parallel.la" && ln -s "../libbagel_parallel.la" "libbagel_parallel.la" ) make[5]: Leaving directory '/build/bagel-1.2.2/src/util/parallel' Making all in io make[5]: Entering directory '/build/bagel-1.2.2/src/util/io' /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o moldenin.lo moldenin.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c moldenin.cc -o moldenin.o /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o moldenout.lo moldenout.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c moldenout.cc -o moldenout.o /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time 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ecp/_sphusp_10.o libtool: link: ranlib .libs/libbagel_integral.a libtool: link: ( cd ".libs" && rm -f "libbagel_integral.la" && ln -s "../libbagel_integral.la" "libbagel_integral.la" ) make[4]: Leaving directory '/build/bagel-1.2.2/src/integral' Making all in df make[4]: Entering directory '/build/bagel-1.2.2/src/df' /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o dfblock.lo dfblock.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c dfblock.cc -o dfblock.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o df.lo df.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG 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complexdf_base.lo reldf.lo reldfhalf.lo reldffull.lo reldffullt.lo relcdmatrix.lo breit2index.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_df.a dfblock.o df.o dfdistt.o paralleldf.o complexdf.o complexdf_base.o reldf.o reldfhalf.o reldffull.o reldffullt.o relcdmatrix.o breit2index.o libtool: link: ranlib .libs/libbagel_df.a libtool: link: ( cd ".libs" && rm -f "libbagel_df.la" && ln -s "../libbagel_df.la" "libbagel_df.la" ) make[4]: Leaving directory '/build/bagel-1.2.2/src/df' Making all in opt make[4]: Entering directory '/build/bagel-1.2.2/src/opt' /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o optimize.lo optimize.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c optimize.cc 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-D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c constraint.cc -o constraint.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o compute_opt.lo compute_opt.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c compute_opt.cc -o compute_opt.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o compute_mep.lo compute_mep.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c compute_mep.cc -o compute_mep.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o update.lo update.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c update.cc -o update.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o qmmm.lo qmmm.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c qmmm.cc -o qmmm.o qmmm.cc: In member function 'void bagel::QMMM_Tinker::edit_tinker_input(std::shared_ptr) const': qmmm.cc:39:9: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 39 | system("mv -f tinkin.xyz tinkin.xyz.old"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc: In member function 'virtual void bagel::QMMM_Tinker::edit_input(std::shared_ptr) const': qmmm.cc:73:8: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | chdir("tinker1"); | ~~~~~^~~~~~~~~~~ qmmm.cc:77:11: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 77 | system("testgrad -k tinkin.key tinkin.xyz y n n > gradientls"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:78:11: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 78 | system("grep 'Total Potential' gradientls | cut -c 29- > ../energy_qmmm"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:82:11: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 82 | system(pp.c_str()); | ~~~~~~^~~~~~~~~~~~ qmmm.cc:85:8: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 85 | chdir("../"); | ~~~~~^~~~~~~ qmmm.cc:87:8: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 87 | chdir("tinker2"); | ~~~~~^~~~~~~~~~~ qmmm.cc:91:11: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 91 | system("testgrad -k tinkin.key tinkin.xyz y n n > gradientls"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:92:11: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 92 | system("grep 'Total Potential' gradientls | cut -c 29- > ../energy_qm"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:96:11: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 96 | 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caspt2grad.o caspt2grad_util.o moint.o diagonal.o queue.o orthogonal.o orthogonal_shift.o caspt2/CASPT2.o caspt2/CASPT2_gamma.o caspt2/CASPT2_normq.o caspt2/CASPT2_sourceq.o caspt2/CASPT2_density1q.o caspt2/CASPT2_density2q.o caspt2/CASPT2_deciq.o caspt2/CASPT2_residualq.o caspt2/CASPT2_densityq.o caspt2/CASPT2_tasks1.o caspt2/CASPT2_tasks2.o caspt2/CASPT2_tasks3.o caspt2/CASPT2_tasks4.o caspt2/CASPT2_tasks5.o caspt2/CASPT2_tasks6.o caspt2/CASPT2_tasks7.o caspt2/CASPT2_tasks8.o caspt2/CASPT2_tasks9.o caspt2/CASPT2_tasks10.o caspt2/CASPT2_tasks11.o caspt2/CASPT2_tasks12.o caspt2/CASPT2_tasks13.o caspt2/CASPT2_tasks14.o caspt2/CASPT2_tasks15.o caspt2/CASPT2_tasks16.o caspt2/CASPT2_gen1.o caspt2/CASPT2_gen2.o caspt2/CASPT2_gen3.o caspt2/CASPT2_gen4.o caspt2/CASPT2_gen5.o caspt2/CASPT2_gen6.o caspt2/CASPT2_gen7.o caspt2/CASPT2_gen8.o caspt2/CASPT2_gen9.o caspt2/CASPT2_gen10.o caspt2/CASPT2_gen11.o caspt2/CASPT2_gen12.o caspt2/CASPT2_gen13.o caspt2/CASPT2_gen14.o caspt2/CASPT2_gen15.o caspt2/CASPT2_gen16.o caspt2/CASPT2_contract.o caspt2/SPCASPT2.o caspt2/SPCASPT2_gamma.o caspt2/SPCASPT2_densityq.o caspt2/SPCASPT2_density1q.o caspt2/SPCASPT2_gen1.o caspt2/SPCASPT2_gen2.o caspt2/SPCASPT2_gen3.o caspt2/SPCASPT2_gen4.o caspt2/SPCASPT2_gen5.o caspt2/SPCASPT2_gen6.o caspt2/SPCASPT2_tasks1.o caspt2/SPCASPT2_tasks2.o caspt2/SPCASPT2_tasks3.o caspt2/SPCASPT2_tasks4.o caspt2/SPCASPT2_tasks5.o caspt2/SPCASPT2_tasks6.o caspt2/MSCASPT2.o caspt2/MSCASPT2_gamma.o caspt2/MSCASPT2_densityq.o caspt2/MSCASPT2_density1q.o caspt2/MSCASPT2_density2q.o caspt2/MSCASPT2_deciq.o caspt2/MSCASPT2_deci2q.o caspt2/MSCASPT2_deci3q.o caspt2/MSCASPT2_deci4q.o caspt2/MSCASPT2_gen1.o caspt2/MSCASPT2_gen2.o caspt2/MSCASPT2_gen3.o caspt2/MSCASPT2_gen4.o caspt2/MSCASPT2_gen5.o caspt2/MSCASPT2_gen6.o caspt2/MSCASPT2_gen7.o caspt2/MSCASPT2_gen8.o caspt2/MSCASPT2_gen9.o caspt2/MSCASPT2_gen10.o caspt2/MSCASPT2_gen11.o caspt2/MSCASPT2_gen12.o caspt2/MSCASPT2_tasks1.o caspt2/MSCASPT2_tasks2.o caspt2/MSCASPT2_tasks3.o caspt2/MSCASPT2_tasks4.o caspt2/MSCASPT2_tasks5.o caspt2/MSCASPT2_tasks6.o caspt2/MSCASPT2_tasks7.o caspt2/MSCASPT2_tasks8.o caspt2/MSCASPT2_tasks9.o caspt2/MSCASPT2_tasks10.o caspt2/MSCASPT2_tasks11.o caspt2/MSCASPT2_tasks12.o caspt2/MSCASPT2_shift.o caspt2/MSCASPT2_contract.o mrci/MRCI.o mrci/MRCI_gamma.o mrci/MRCI_sourceq.o mrci/MRCI_normq.o mrci/MRCI_residualq1.o mrci/MRCI_residualq2.o mrci/MRCI_residualq3.o mrci/MRCI_residualq4.o mrci/MRCI_residualq5.o mrci/MRCI_residualq6.o mrci/MRCI_residualq7.o mrci/MRCI_residualq8.o mrci/MRCI_residualq9.o mrci/MRCI_tasks1.o mrci/MRCI_tasks2.o mrci/MRCI_tasks3.o mrci/MRCI_tasks4.o mrci/MRCI_tasks5.o mrci/MRCI_tasks6.o mrci/MRCI_tasks7.o mrci/MRCI_tasks8.o mrci/MRCI_tasks9.o mrci/MRCI_tasks10.o mrci/MRCI_tasks11.o mrci/MRCI_tasks12.o mrci/MRCI_tasks13.o mrci/MRCI_tasks14.o mrci/MRCI_tasks15.o mrci/MRCI_tasks16.o mrci/MRCI_tasks17.o mrci/MRCI_tasks18.o mrci/MRCI_tasks19.o mrci/MRCI_tasks20.o mrci/MRCI_gen1.o mrci/MRCI_gen2.o mrci/MRCI_gen3.o mrci/MRCI_gen4.o mrci/MRCI_gen5.o mrci/MRCI_gen6.o mrci/MRCI_gen7.o mrci/MRCI_gen8.o mrci/MRCI_gen9.o mrci/MRCI_gen10.o mrci/MRCI_gen11.o mrci/MRCI_gen12.o mrci/MRCI_gen13.o mrci/MRCI_gen14.o mrci/MRCI_gen15.o mrci/MRCI_gen16.o mrci/MRCI_gen17.o mrci/MRCI_gen18.o mrci/MRCI_gen19.o mrci/MRCI_gen20.o relcaspt2/RelCASPT2.o relcaspt2/RelCASPT2_gamma.o relcaspt2/RelCASPT2_residualq.o relcaspt2/RelCASPT2_normq.o relcaspt2/RelCASPT2_sourceq.o relcaspt2/RelCASPT2_gen1.o relcaspt2/RelCASPT2_gen2.o relcaspt2/RelCASPT2_gen3.o relcaspt2/RelCASPT2_gen4.o relcaspt2/RelCASPT2_gen5.o relcaspt2/RelCASPT2_gen6.o relcaspt2/RelCASPT2_tasks1.o relcaspt2/RelCASPT2_tasks2.o relcaspt2/RelCASPT2_tasks3.o relcaspt2/RelCASPT2_tasks4.o relcaspt2/RelCASPT2_tasks5.o relcaspt2/RelCASPT2_tasks6.o casa/CASA.o casa/CASA_gamma.o casa/CASA_residualq.o casa/CASA_sourceq.o casa/CASA_gen1.o casa/CASA_gen2.o casa/CASA_gen3.o casa/CASA_gen4.o casa/CASA_gen5.o casa/CASA_gen6.o casa/CASA_tasks1.o casa/CASA_tasks2.o casa/CASA_tasks3.o casa/CASA_tasks4.o casa/CASA_tasks5.o casa/CASA_tasks6.o relcasa/RelCASA.o relcasa/RelCASA_gamma.o relcasa/RelCASA_residualq.o relcasa/RelCASA_sourceq.o relcasa/RelCASA_gen1.o relcasa/RelCASA_gen2.o relcasa/RelCASA_gen3.o relcasa/RelCASA_gen4.o relcasa/RelCASA_gen5.o relcasa/RelCASA_gen6.o relcasa/RelCASA_tasks1.o relcasa/RelCASA_tasks2.o relcasa/RelCASA_tasks3.o relcasa/RelCASA_tasks4.o relcasa/RelCASA_tasks5.o relcasa/RelCASA_tasks6.o relmrci/RelMRCI.o relmrci/RelMRCI_gamma.o relmrci/RelMRCI_sourceq.o relmrci/RelMRCI_normq.o relmrci/RelMRCI_residualq1.o relmrci/RelMRCI_residualq2.o relmrci/RelMRCI_residualq3.o relmrci/RelMRCI_residualq4.o relmrci/RelMRCI_residualq5.o relmrci/RelMRCI_residualq6.o relmrci/RelMRCI_tasks1.o relmrci/RelMRCI_tasks2.o relmrci/RelMRCI_tasks3.o relmrci/RelMRCI_tasks4.o relmrci/RelMRCI_tasks5.o relmrci/RelMRCI_tasks6.o relmrci/RelMRCI_tasks7.o relmrci/RelMRCI_tasks8.o relmrci/RelMRCI_tasks9.o relmrci/RelMRCI_tasks10.o relmrci/RelMRCI_tasks11.o relmrci/RelMRCI_tasks12.o relmrci/RelMRCI_tasks13.o relmrci/RelMRCI_tasks14.o relmrci/RelMRCI_tasks15.o relmrci/RelMRCI_tasks16.o relmrci/RelMRCI_gen1.o relmrci/RelMRCI_gen2.o relmrci/RelMRCI_gen3.o relmrci/RelMRCI_gen4.o relmrci/RelMRCI_gen5.o relmrci/RelMRCI_gen6.o relmrci/RelMRCI_gen7.o relmrci/RelMRCI_gen8.o relmrci/RelMRCI_gen9.o relmrci/RelMRCI_gen10.o relmrci/RelMRCI_gen11.o relmrci/RelMRCI_gen12.o relmrci/RelMRCI_gen13.o relmrci/RelMRCI_gen14.o relmrci/RelMRCI_gen15.o relmrci/RelMRCI_gen16.o libtool: link: ranlib .libs/libbagel_smith.a libtool: link: ( cd ".libs" && rm -f "libbagel_smith.la" && ln -s "../libbagel_smith.la" "libbagel_smith.la" ) make[4]: Leaving directory '/build/bagel-1.2.2/src/smith' Making all in prop make[4]: Entering directory '/build/bagel-1.2.2/src/prop' /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o multipole.lo multipole.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c multipole.cc -o multipole.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o hyperfine.lo hyperfine.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c hyperfine.cc -o hyperfine.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o momentum.lo momentum.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c momentum.cc -o momentum.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o momentum_london.lo momentum_london.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c momentum_london.cc -o momentum_london.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o momentum_point.lo momentum_point.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c momentum_point.cc -o momentum_point.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o current.lo current.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c current.cc -o current.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o overlap_point.lo overlap_point.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c overlap_point.cc -o overlap_point.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o moprint.lo moprint.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c moprint.cc -o moprint.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o sphmultipole.lo sphmultipole.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c sphmultipole.cc -o sphmultipole.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o pseudospin/stevensop.lo pseudospin/stevensop.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c pseudospin/stevensop.cc -o pseudospin/stevensop.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o pseudospin/pseudospin.lo pseudospin/pseudospin.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c pseudospin/pseudospin.cc -o pseudospin/pseudospin.o /bin/bash ../../libtool --tag=CXX --mode=link mpicxx -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o libbagel_prop.la multipole.lo hyperfine.lo momentum.lo momentum_london.lo momentum_point.lo current.lo overlap_point.lo moprint.lo sphmultipole.lo pseudospin/stevensop.lo pseudospin/pseudospin.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_prop.a multipole.o hyperfine.o momentum.o momentum_london.o momentum_point.o current.o overlap_point.o moprint.o sphmultipole.o pseudospin/stevensop.o pseudospin/pseudospin.o libtool: link: ranlib .libs/libbagel_prop.a libtool: link: ( cd ".libs" && rm -f "libbagel_prop.la" && ln -s "../libbagel_prop.la" "libbagel_prop.la" ) make[4]: Leaving directory '/build/bagel-1.2.2/src/prop' Making all in ci make[4]: Entering directory 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dkhcore.o dipolematrix.o sohcore.o fermicontact.o spindipole.o angmom.o cap.o giao/zhcore.o giao/zkinetic.o giao/zoverlap.o giao/relhcore_london.o giao/reloverlap_london.o giao/small1e_london.o giao/angmom_london.o rel/reloverlap.o rel/relhcore.o rel/breitint.o rel/reldipole.o rel/small1e.o rel/spinint.o libtool: link: ranlib .libs/libbagel_mat1e.a libtool: link: ( cd ".libs" && rm -f "libbagel_mat1e.la" && ln -s "../libbagel_mat1e.la" "libbagel_mat1e.la" ) make[4]: Leaving directory '/build/bagel-1.2.2/src/mat1e' Making all in basis make[4]: Entering directory '/build/bagel-1.2.2/src/basis' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/bagel-1.2.2/src/basis' make[4]: Entering directory '/build/bagel-1.2.2/src' mpicxx -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o main.o main.cc /bin/bash ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o run_bagel.lo run_bagel.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c run_bagel.cc -o run_bagel.o /bin/bash ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o static.lo static.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c static.cc -o static.o /bin/bash ../libtool --tag=CXX --mode=link mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o libbagel.la -rpath /usr/lib/bagel run_bagel.lo static.lo opt/libbagel_opt.la multi/zcasscf/libbagel_zcasscf.la ci/zfci/libbagel_zfci.la ci/fci/libbagel_fci.la ci/ras/libbagel_ras.la response/libbagel_response.la scf/libbagel_scf.la multi/casscf/libbagel_casscf.la pt2/libbagel_pt2.la grad/libbagel_grad.la wfn/libbagel_wfn.la df/libbagel_df.la smith/libbagel_smith.la prop/libbagel_prop.la asd/libbagel_asd.la asd/dmrg/libbagel_asd_dmrg.la asd/orbital/libbagel_asd_orbital.la asd/dimer/libbagel_dimer.la asd/multisite/libbagel_multisite.la ci/ciutil/libbagel_ciutil.la mat1e/libbagel_mat1e.la integral/libbagel_integral.la molecule/libbagel_molecule.la util/io/libbagel_io.la util/libbagel_util.la util/parallel/libbagel_parallel.la util/math/libbagel_math.la util/input/libbagel_input.la -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: (cd .libs/libbagel.lax/libbagel_opt.a && ar x "/build/bagel-1.2.2/src/opt/.libs/libbagel_opt.a") libtool: link: (cd .libs/libbagel.lax/libbagel_zcasscf.a && ar x "/build/bagel-1.2.2/src/multi/zcasscf/.libs/libbagel_zcasscf.a") libtool: link: (cd .libs/libbagel.lax/libbagel_zfci.a && ar x "/build/bagel-1.2.2/src/ci/zfci/.libs/libbagel_zfci.a") libtool: link: (cd .libs/libbagel.lax/libbagel_fci.a && ar x "/build/bagel-1.2.2/src/ci/fci/.libs/libbagel_fci.a") libtool: link: (cd .libs/libbagel.lax/libbagel_ras.a && ar x "/build/bagel-1.2.2/src/ci/ras/.libs/libbagel_ras.a") libtool: link: (cd .libs/libbagel.lax/libbagel_response.a && ar x "/build/bagel-1.2.2/src/response/.libs/libbagel_response.a") libtool: link: (cd .libs/libbagel.lax/libbagel_scf.a && ar x "/build/bagel-1.2.2/src/scf/.libs/libbagel_scf.a") libtool: link: (cd .libs/libbagel.lax/libbagel_casscf.a && ar x "/build/bagel-1.2.2/src/multi/casscf/.libs/libbagel_casscf.a") libtool: link: (cd .libs/libbagel.lax/libbagel_pt2.a && ar x "/build/bagel-1.2.2/src/pt2/.libs/libbagel_pt2.a") libtool: link: (cd .libs/libbagel.lax/libbagel_grad.a && ar x "/build/bagel-1.2.2/src/grad/.libs/libbagel_grad.a") libtool: link: (cd .libs/libbagel.lax/libbagel_wfn.a && ar x "/build/bagel-1.2.2/src/wfn/.libs/libbagel_wfn.a") libtool: link: (cd .libs/libbagel.lax/libbagel_df.a && ar x "/build/bagel-1.2.2/src/df/.libs/libbagel_df.a") libtool: link: (cd .libs/libbagel.lax/libbagel_smith.a && ar x "/build/bagel-1.2.2/src/smith/.libs/libbagel_smith.a") libtool: link: (cd .libs/libbagel.lax/libbagel_prop.a && ar x "/build/bagel-1.2.2/src/prop/.libs/libbagel_prop.a") libtool: link: (cd .libs/libbagel.lax/libbagel_asd.a && ar x "/build/bagel-1.2.2/src/asd/.libs/libbagel_asd.a") libtool: link: (cd .libs/libbagel.lax/libbagel_asd_dmrg.a && ar x "/build/bagel-1.2.2/src/asd/dmrg/.libs/libbagel_asd_dmrg.a") libtool: link: (cd .libs/libbagel.lax/libbagel_asd_orbital.a && ar x "/build/bagel-1.2.2/src/asd/orbital/.libs/libbagel_asd_orbital.a") libtool: link: (cd .libs/libbagel.lax/libbagel_dimer.a && ar x "/build/bagel-1.2.2/src/asd/dimer/.libs/libbagel_dimer.a") libtool: link: (cd .libs/libbagel.lax/libbagel_multisite.a && ar x "/build/bagel-1.2.2/src/asd/multisite/.libs/libbagel_multisite.a") libtool: link: (cd .libs/libbagel.lax/libbagel_ciutil.a && ar x "/build/bagel-1.2.2/src/ci/ciutil/.libs/libbagel_ciutil.a") libtool: link: (cd .libs/libbagel.lax/libbagel_mat1e.a && ar x "/build/bagel-1.2.2/src/mat1e/.libs/libbagel_mat1e.a") libtool: link: (cd .libs/libbagel.lax/libbagel_integral.a && ar x "/build/bagel-1.2.2/src/integral/.libs/libbagel_integral.a") libtool: link: (cd .libs/libbagel.lax/libbagel_molecule.a && ar x "/build/bagel-1.2.2/src/molecule/.libs/libbagel_molecule.a") libtool: link: (cd .libs/libbagel.lax/libbagel_io.a && ar x "/build/bagel-1.2.2/src/util/io/.libs/libbagel_io.a") libtool: link: (cd .libs/libbagel.lax/libbagel_util.a && ar x "/build/bagel-1.2.2/src/util/.libs/libbagel_util.a") libtool: link: (cd .libs/libbagel.lax/libbagel_parallel.a && ar x "/build/bagel-1.2.2/src/util/parallel/.libs/libbagel_parallel.a") libtool: link: (cd .libs/libbagel.lax/libbagel_math.a && ar x "/build/bagel-1.2.2/src/util/math/.libs/libbagel_math.a") libtool: link: (cd .libs/libbagel.lax/libbagel_input.a && ar x "/build/bagel-1.2.2/src/util/input/.libs/libbagel_input.a") copying selected object files to avoid basename conflicts... libtool: link: ln .libs/libbagel.lax/libbagel_ras.a/determinants.o .libs/libbagel.lax/lt1-determinants.o || cp .libs/libbagel.lax/libbagel_ras.a/determinants.o .libs/libbagel.lax/lt1-determinants.o libtool: link: ln .libs/libbagel.lax/libbagel_asd_dmrg.a/form_sigma.o .libs/libbagel.lax/lt2-form_sigma.o || cp .libs/libbagel.lax/libbagel_asd_dmrg.a/form_sigma.o .libs/libbagel.lax/lt2-form_sigma.o libtool: link: ar cr .libs/libbagel.a run_bagel.o static.o .libs/libbagel.lax/libbagel_opt.a/compute_mep.o .libs/libbagel.lax/libbagel_opt.a/compute_opt.o .libs/libbagel.lax/libbagel_opt.a/constraint.o .libs/libbagel.lax/libbagel_opt.a/get_grad.o .libs/libbagel.lax/libbagel_opt.a/opt.o .libs/libbagel.lax/libbagel_opt.a/optimize.o .libs/libbagel.lax/libbagel_opt.a/qmmm.o .libs/libbagel.lax/libbagel_opt.a/update.o .libs/libbagel.lax/libbagel_zcasscf.a/zcasnoopt.o 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.libs/libbagel.lax/libbagel_io.a/molden_transforms.o .libs/libbagel.lax/libbagel_io.a/moldenin.o .libs/libbagel.lax/libbagel_io.a/moldenio.o .libs/libbagel.lax/libbagel_io.a/moldenout.o .libs/libbagel.lax/libbagel_util.a/atommap.o .libs/libbagel.lax/libbagel_util.a/f77_interface.o .libs/libbagel.lax/libbagel_parallel.a/mpi_interface.o .libs/libbagel.lax/libbagel_parallel.a/process.o .libs/libbagel.lax/libbagel_parallel.a/resources.o .libs/libbagel.lax/libbagel_parallel.a/rmawindow.o .libs/libbagel.lax/libbagel_math.a/algo.o .libs/libbagel.lax/libbagel_math.a/blocked.o .libs/libbagel.lax/libbagel_math.a/blocksparsematrix.o .libs/libbagel.lax/libbagel_math.a/btas_interface.o .libs/libbagel.lax/libbagel_math.a/csymmatrix.o .libs/libbagel.lax/libbagel_math.a/distmatrix.o .libs/libbagel.lax/libbagel_math.a/distmatrix_base.o .libs/libbagel.lax/libbagel_math.a/distzmatrix.o .libs/libbagel.lax/libbagel_math.a/jacobi.o .libs/libbagel.lax/libbagel_math.a/lt1-transpose.o .libs/libbagel.lax/libbagel_math.a/matrix.o .libs/libbagel.lax/libbagel_math.a/matrix_base.o .libs/libbagel.lax/libbagel_math.a/matview.o .libs/libbagel.lax/libbagel_math.a/preallocarray.o .libs/libbagel.lax/libbagel_math.a/quatern.o .libs/libbagel.lax/libbagel_math.a/sparsematrix.o .libs/libbagel.lax/libbagel_math.a/sphharmonics.o .libs/libbagel.lax/libbagel_math.a/transpose.o .libs/libbagel.lax/libbagel_math.a/unblocked.o .libs/libbagel.lax/libbagel_math.a/xyzfile.o .libs/libbagel.lax/libbagel_math.a/zmatrix.o .libs/libbagel.lax/libbagel_math.a/zquatev.o .libs/libbagel.lax/libbagel_math.a/ztranspose.o .libs/libbagel.lax/libbagel_input.a/libbagel_input_la-input.o libtool: link: ranlib .libs/libbagel.a libtool: link: rm -fr .libs/libbagel.lax .libs/libbagel.lax libtool: link: ( cd ".libs" && rm -f "libbagel.la" && ln -s "../libbagel.la" "libbagel.la" ) /bin/bash ../libtool --tag=CXX --mode=link mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o BAGEL main.o libbagel.la opt/libbagel_opt.la multi/zcasscf/libbagel_zcasscf.la ci/zfci/libbagel_zfci.la ci/fci/libbagel_fci.la ci/ras/libbagel_ras.la response/libbagel_response.la scf/libbagel_scf.la multi/casscf/libbagel_casscf.la pt2/libbagel_pt2.la grad/libbagel_grad.la wfn/libbagel_wfn.la df/libbagel_df.la smith/libbagel_smith.la prop/libbagel_prop.la asd/libbagel_asd.la asd/dmrg/libbagel_asd_dmrg.la asd/orbital/libbagel_asd_orbital.la asd/dimer/libbagel_dimer.la asd/multisite/libbagel_multisite.la ci/ciutil/libbagel_ciutil.la mat1e/libbagel_mat1e.la integral/libbagel_integral.la molecule/libbagel_molecule.la util/io/libbagel_io.la util/libbagel_util.la util/parallel/libbagel_parallel.la util/math/libbagel_math.la util/input/libbagel_input.la -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -Wl,-z -Wl,relro -o BAGEL main.o -L/usr/lib/x86_64-linux-gnu ./.libs/libbagel.a opt/.libs/libbagel_opt.a multi/zcasscf/.libs/libbagel_zcasscf.a ci/zfci/.libs/libbagel_zfci.a ci/fci/.libs/libbagel_fci.a ci/ras/.libs/libbagel_ras.a response/.libs/libbagel_response.a scf/.libs/libbagel_scf.a multi/casscf/.libs/libbagel_casscf.a pt2/.libs/libbagel_pt2.a grad/.libs/libbagel_grad.a wfn/.libs/libbagel_wfn.a df/.libs/libbagel_df.a smith/.libs/libbagel_smith.a prop/.libs/libbagel_prop.a asd/.libs/libbagel_asd.a asd/dmrg/.libs/libbagel_asd_dmrg.a asd/orbital/.libs/libbagel_asd_orbital.a asd/dimer/.libs/libbagel_dimer.a asd/multisite/.libs/libbagel_multisite.a ci/ciutil/.libs/libbagel_ciutil.a mat1e/.libs/libbagel_mat1e.a integral/.libs/libbagel_integral.a molecule/.libs/libbagel_molecule.a util/io/.libs/libbagel_io.a util/.libs/libbagel_util.a util/parallel/.libs/libbagel_parallel.a util/math/.libs/libbagel_math.a util/input/.libs/libbagel_input.a -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread make[4]: Leaving directory '/build/bagel-1.2.2/src' make[3]: Leaving directory '/build/bagel-1.2.2/src' make[3]: Entering directory '/build/bagel-1.2.2' make[3]: Leaving directory '/build/bagel-1.2.2' make[2]: Leaving directory '/build/bagel-1.2.2' make[1]: Leaving directory '/build/bagel-1.2.2' debian/rules override_dh_auto_test make[1]: Entering directory '/build/bagel-1.2.2' dh_auto_test make -j1 check VERBOSE=1 make[2]: Entering directory '/build/bagel-1.2.2' Making check in src make[3]: Entering directory '/build/bagel-1.2.2/src' Making check in util make[4]: Entering directory '/build/bagel-1.2.2/src/util' Making check in parallel make[5]: Entering directory '/build/bagel-1.2.2/src/util/parallel' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/util/parallel' Making check in io make[5]: Entering directory '/build/bagel-1.2.2/src/util/io' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/util/io' Making check in input make[5]: Entering directory '/build/bagel-1.2.2/src/util/input' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/util/input' Making check in math make[5]: Entering directory '/build/bagel-1.2.2/src/util/math' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/util/math' make[5]: Entering directory '/build/bagel-1.2.2/src/util' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/util' make[4]: Leaving directory '/build/bagel-1.2.2/src/util' Making check in molecule make[4]: Entering directory '/build/bagel-1.2.2/src/molecule' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/molecule' Making check in integral make[4]: Entering directory '/build/bagel-1.2.2/src/integral' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/integral' Making check in df make[4]: Entering directory '/build/bagel-1.2.2/src/df' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/df' Making check in opt make[4]: Entering directory '/build/bagel-1.2.2/src/opt' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/opt' Making check in grad make[4]: Entering directory '/build/bagel-1.2.2/src/grad' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/grad' Making check in pt2 make[4]: Entering directory '/build/bagel-1.2.2/src/pt2' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/pt2' Making check in wfn make[4]: Entering directory '/build/bagel-1.2.2/src/wfn' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/wfn' Making check in scf make[4]: Entering directory '/build/bagel-1.2.2/src/scf' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/scf' Making check in multi make[4]: Entering directory '/build/bagel-1.2.2/src/multi' Making check in casscf make[5]: Entering directory '/build/bagel-1.2.2/src/multi/casscf' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/multi/casscf' Making check in zcasscf make[5]: Entering directory '/build/bagel-1.2.2/src/multi/zcasscf' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/multi/zcasscf' make[5]: Entering directory '/build/bagel-1.2.2/src/multi' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/multi' make[4]: Leaving directory '/build/bagel-1.2.2/src/multi' Making check in smith make[4]: Entering directory '/build/bagel-1.2.2/src/smith' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/smith' Making check in prop make[4]: Entering directory '/build/bagel-1.2.2/src/prop' make[4]: Nothing to be done for 'check'. 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'/build/bagel-1.2.2/src/ci' make[4]: Leaving directory '/build/bagel-1.2.2/src/ci' Making check in response make[4]: Entering directory '/build/bagel-1.2.2/src/response' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/response' Making check in asd make[4]: Entering directory '/build/bagel-1.2.2/src/asd' Making check in dmrg make[5]: Entering directory '/build/bagel-1.2.2/src/asd/dmrg' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/dmrg' Making check in dimer make[5]: Entering directory '/build/bagel-1.2.2/src/asd/dimer' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/dimer' Making check in multisite make[5]: Entering directory '/build/bagel-1.2.2/src/asd/multisite' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/multisite' Making check in orbital make[5]: Entering directory '/build/bagel-1.2.2/src/asd/orbital' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/orbital' make[5]: Entering directory '/build/bagel-1.2.2/src/asd' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/asd' make[4]: Leaving directory '/build/bagel-1.2.2/src/asd' Making check in mat1e make[4]: Entering directory '/build/bagel-1.2.2/src/mat1e' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/mat1e' Making check in basis make[4]: Entering directory '/build/bagel-1.2.2/src/basis' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-1.2.2/src/basis' make[4]: Entering directory '/build/bagel-1.2.2/src' make TestSuite make[5]: Entering directory '/build/bagel-1.2.2/src' mpicxx -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o test_main.o test_main.cc /bin/bash ../libtool --tag=CXX --mode=link mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o TestSuite test_main.o libbagel.la opt/libbagel_opt.la multi/zcasscf/libbagel_zcasscf.la ci/zfci/libbagel_zfci.la ci/fci/libbagel_fci.la ci/ras/libbagel_ras.la response/libbagel_response.la scf/libbagel_scf.la multi/casscf/libbagel_casscf.la pt2/libbagel_pt2.la grad/libbagel_grad.la wfn/libbagel_wfn.la df/libbagel_df.la smith/libbagel_smith.la prop/libbagel_prop.la asd/libbagel_asd.la asd/dmrg/libbagel_asd_dmrg.la asd/orbital/libbagel_asd_orbital.la asd/dimer/libbagel_dimer.la asd/multisite/libbagel_multisite.la ci/ciutil/libbagel_ciutil.la mat1e/libbagel_mat1e.la integral/libbagel_integral.la molecule/libbagel_molecule.la util/io/libbagel_io.la util/libbagel_util.la util/parallel/libbagel_parallel.la util/math/libbagel_math.la util/input/libbagel_input.la -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -Wl,-z -Wl,relro -o TestSuite test_main.o -L/usr/lib/x86_64-linux-gnu ./.libs/libbagel.a opt/.libs/libbagel_opt.a multi/zcasscf/.libs/libbagel_zcasscf.a ci/zfci/.libs/libbagel_zfci.a ci/fci/.libs/libbagel_fci.a ci/ras/.libs/libbagel_ras.a response/.libs/libbagel_response.a scf/.libs/libbagel_scf.a multi/casscf/.libs/libbagel_casscf.a pt2/.libs/libbagel_pt2.a grad/.libs/libbagel_grad.a wfn/.libs/libbagel_wfn.a df/.libs/libbagel_df.a smith/.libs/libbagel_smith.a prop/.libs/libbagel_prop.a asd/.libs/libbagel_asd.a asd/dmrg/.libs/libbagel_asd_dmrg.a asd/orbital/.libs/libbagel_asd_orbital.a asd/dimer/.libs/libbagel_dimer.a asd/multisite/.libs/libbagel_multisite.a ci/ciutil/.libs/libbagel_ciutil.a mat1e/.libs/libbagel_mat1e.a integral/.libs/libbagel_integral.a molecule/.libs/libbagel_molecule.a util/io/.libs/libbagel_io.a util/.libs/libbagel_util.a util/parallel/.libs/libbagel_parallel.a util/math/.libs/libbagel_math.a util/input/.libs/libbagel_input.a -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread make[5]: Leaving directory '/build/bagel-1.2.2/src' make[4]: Leaving directory '/build/bagel-1.2.2/src' make[3]: Leaving directory '/build/bagel-1.2.2/src' make[3]: Entering directory '/build/bagel-1.2.2' make[3]: Leaving directory '/build/bagel-1.2.2' make[2]: Leaving directory '/build/bagel-1.2.2' mkdir -p /build/bagel-1.2.2/src/testsuite (cd /build/bagel-1.2.2/src/testsuite; ../TestSuite --log_level=all) ionos11-amd64 Running 31 test cases... Entering test module "Suites" ../src/testimpl/test_scf.cc(84): Entering test suite "TEST_SCF" ../src/testimpl/test_scf.cc(86): Entering test case "DF_HF" ../src/testimpl/test_scf.cc(87): info: check compare(scf_energy("hf_svp_hf"), -99.84779026) has passed ../src/testimpl/test_scf.cc(88): info: check compare(scf_energy("hf_svp_dfhf"), -99.84772354) has passed ../src/testimpl/test_scf.cc(90): info: check compare(scf_energy("hf_svp_dfhf_restart"),-99.84772354) has passed ../src/testimpl/test_scf.cc(92): info: check compare(scf_energy("hf_svp_dfhf_ext"), -99.83765614) has passed ../src/testimpl/test_scf.cc(93): info: check compare(scf_energy("hf_svp_dfhf_cart"), -99.84911270) has passed ../src/testimpl/test_scf.cc(94): info: check compare(scf_energy("hf_svp_dfhf_charge"), -99.78567137) has passed ../src/testimpl/test_scf.cc(95): info: check compare(scf_energy("hf_svp_dfhf_dkh"), -99.92869677) has passed ../src/testimpl/test_scf.cc(96): info: check compare(scf_energy("hf_mix_dfhf"), -99.83889193) has passed ../src/testimpl/test_scf.cc(97): info: check compare(scf_energy("hf_mix2_dfhf"), -99.83889193) has passed ../src/testimpl/test_scf.cc(98): info: check compare(scf_energy("oh_svp_uhf"), -75.28410147) has passed ../src/testimpl/test_scf.cc(99): info: check compare(scf_energy("hc_svp_rohf"), -38.16810629) has passed ../src/testimpl/test_scf.cc(100): info: check compare(scf_energy("hf_new_dfhf"), -99.97989929) has passed ../src/testimpl/test_scf.cc(101): info: check compare(scf_energy("hcl_svp_dfhf"), -459.93784632) has passed ../src/testimpl/test_scf.cc(102): info: check compare(scf_energy("cuh2_ecp_hf"), -196.12254012) has passed ../src/testimpl/test_scf.cc(103): info: check compare(scf_energy("hbr_ecp_sohf"), -13.68431370) has passed ../src/testimpl/test_scf.cc(104): info: check compare(scf_energy("h2o_svp_fmm"), -151.91459783) has passed ../src/testimpl/test_scf.cc(106): info: check compare(scf_energy("h2o_svp_fmm_restart"),-151.91459783) has passed ../src/testimpl/test_scf.cc(86): Leaving test case "DF_HF"; testing time: 10719465us ../src/testimpl/test_scf.cc(84): Leaving test suite "TEST_SCF"; testing time: 10719500us ../src/testimpl/test_molden.cc(98): Entering test suite "TEST_MOLDEN" ../src/testimpl/test_molden.cc(100): Entering test case "MOLDEN" ../src/testimpl/test_molden.cc(101): info: check compare(molden_out_energy("hf_write_mol_sph", "hf_read_mol_sph"), -99.84772354 ) has passed ../src/testimpl/test_molden.cc(102): info: check compare(molden_out_energy("hf_write_mol_cart", "hf_read_mol_cart"), -99.84911270 ) has passed ../src/testimpl/test_molden.cc(100): Leaving test case "MOLDEN"; testing time: 433908us ../src/testimpl/test_molden.cc(98): Leaving test suite "TEST_MOLDEN"; testing time: 433959us ../src/testimpl/test_prop.cc(67): Entering test suite "TEST_PROP" ../src/testimpl/test_prop.cc(69): Entering test case "MULTIPOLE" ../src/testimpl/test_prop.cc(70): info: check compare>(multipole("hf_svp_dfhf"), hf_svp_dfhf_multipole_ref(), 1.0e-6) has passed ../src/testimpl/test_prop.cc(69): Leaving test case "MULTIPOLE"; testing time: 189120us ../src/testimpl/test_prop.cc(67): Leaving test suite "TEST_PROP"; testing time: 189151us ../src/testimpl/test_ks.cc(61): Entering test suite "TEST_KS" ../src/testimpl/test_ks.cc(63): Entering test case "DF_KS" ../src/testimpl/test_ks.cc(64): info: check compare(ks_energy("hf_svp_b3lyp"), -100.28959774) has passed ../src/testimpl/test_ks.cc(63): Leaving test case "DF_KS"; testing time: 1015968us ../src/testimpl/test_ks.cc(61): Leaving test suite "TEST_KS"; testing time: 1015996us ../src/testimpl/test_rel.cc(66): Entering test suite "TEST_REL" ../src/testimpl/test_rel.cc(68): Entering test case "DIRAC_FOCK" ../src/testimpl/test_rel.cc(69): info: check compare(rel_energy("hf_svp_coulomb"), -99.93791152) has passed ../src/testimpl/test_rel.cc(70): info: check compare(rel_energy("hf_svp_gaunt"), -99.92699858) has passed ../src/testimpl/test_rel.cc(71): info: check compare(rel_energy("hf_svp_breit"), -99.92755305) has passed ../src/testimpl/test_rel.cc(68): Leaving test case "DIRAC_FOCK"; testing time: 24722875us ../src/testimpl/test_rel.cc(66): Leaving test suite "TEST_REL"; testing time: 24722905us ../src/testimpl/test_mp2.cc(58): Entering test suite "TEST_MP2" ../src/testimpl/test_mp2.cc(60): Entering test case "MP2" ../src/testimpl/test_mp2.cc(61): info: check compare(mp2_energy("benzene_svp_mp2"), -231.31440958) has passed ../src/testimpl/test_mp2.cc(62): info: check compare(mp2_energy("benzene_svp_mp2_aux"), -231.31450878) has passed ../src/testimpl/test_mp2.cc(60): Leaving test case "MP2"; testing time: 58847878us ../src/testimpl/test_mp2.cc(58): Leaving test suite "TEST_MP2"; testing time: 58847913us ../src/testimpl/test_casscf.cc(62): Entering test suite "TEST_CASSCF" ../src/testimpl/test_casscf.cc(64): Entering test case "DF_CASSCF" ../src/testimpl/test_casscf.cc(65): info: check compare(cas_energy("h2o_svp_cas"), -76.00368392) has passed ../src/testimpl/test_casscf.cc(66): info: check compare(cas_energy("lif_svp_cas22"), -106.70563743) has passed ../src/testimpl/test_casscf.cc(67): info: check compare(cas_energy("li2_tzvpp_cas43"), -14.87300366) has passed ../src/testimpl/test_casscf.cc(68): info: check compare(cas_energy("lih_tzvpp_cas22"), -7.98191070) has passed ../src/testimpl/test_casscf.cc(64): Leaving test case "DF_CASSCF"; testing time: 4289540us ../src/testimpl/test_casscf.cc(62): Leaving test suite "TEST_CASSCF"; testing time: 4289578us ../src/testimpl/test_fci.cc(103): Entering test suite "TEST_FCI" ../src/testimpl/test_fci.cc(105): Entering test case "KNOWLES_HANDY" ../src/testimpl/test_fci.cc(106): info: check compare(fci_energy("hf_sto3g_fci_kh"), reference_fci_energy()) has passed ../src/testimpl/test_fci.cc(110): info: check compare(fci_energy("hhe_svp_fci_kh_trip"), reference_fci_energy2()) has passed ../src/testimpl/test_fci.cc(105): Leaving test case "KNOWLES_HANDY"; testing time: 384078us ../src/testimpl/test_fci.cc(113): Entering test case "HARRISON_ZARRABIAN" ../src/testimpl/test_fci.cc(114): info: check compare(fci_energy("hf_sto3g_fci_hz"), reference_fci_energy()) has passed ../src/testimpl/test_fci.cc(115): info: check compare(fci_energy("hhe_svp_fci_hz_trip"), reference_fci_energy2()) has passed ../src/testimpl/test_fci.cc(113): Leaving test case "HARRISON_ZARRABIAN"; testing time: 461285us ../src/testimpl/test_fci.cc(119): Entering test case "DIST_FCI" ../src/testimpl/test_fci.cc(120): info: check compare(fci_energy("hf_sto3g_fci_dist"), reference_fci_energy()) has passed ../src/testimpl/test_fci.cc(119): Leaving test case "DIST_FCI"; testing time: 190449us ../src/testimpl/test_fci.cc(103): Leaving test suite "TEST_FCI"; testing time: 1035931us ../src/testimpl/test_zfci.cc(105): Entering test suite "TEST_RELFCI" ../src/testimpl/test_zfci.cc(107): Entering test case "ZHARRISON" ../src/testimpl/test_zfci.cc(108): info: check compare(relfci_energy("hf_sto3g_relfci_coulomb"), reference_relfci_energy()) has passed ../src/testimpl/test_zfci.cc(109): info: check compare(relfci_energy("hf_sto3g_relfci_gaunt"), reference_relfci_energy2()) has passed ../src/testimpl/test_zfci.cc(110): info: check compare(relfci_energy("hf_sto3g_relfci_breit"), reference_relfci_energy3()) has passed ../src/testimpl/test_zfci.cc(107): Leaving test case "ZHARRISON"; testing time: 19058085us ../src/testimpl/test_zfci.cc(105): Leaving test suite "TEST_RELFCI"; testing time: 19058124us ../src/testimpl/test_zcasscf.cc(98): Entering test suite "TEST_RELCAS" ../src/testimpl/test_zcasscf.cc(100): Entering test case "ZCASSCF" Test case TEST_RELCAS/ZCASSCF did not check any assertions ../src/testimpl/test_zcasscf.cc(100): Leaving test case "ZCASSCF"; testing time: 541us ../src/testimpl/test_zcasscf.cc(98): Leaving test suite "TEST_RELCAS"; testing time: 590us ../src/testimpl/test_ras.cc(92): Entering test suite "TEST_RAS" ../src/testimpl/test_ras.cc(94): Entering test case "FCI_EQUIVALENT" ../src/testimpl/test_ras.cc(95): info: check compare(ras_energy("h2o_sto3g_ras_full"), reference_ras_energy_h2o_full()) has passed ../src/testimpl/test_ras.cc(96): info: check compare(ras_energy("hhe_svp_ras_full"), reference_ras_energy_hhe_full()) has passed ../src/testimpl/test_ras.cc(94): Leaving test case "FCI_EQUIVALENT"; testing time: 580215us ../src/testimpl/test_ras.cc(99): Entering test case "RESTRICTED" ../src/testimpl/test_ras.cc(100): info: check compare(ras_energy("h2o_sto3g_ras_restricted"), reference_ras_energy_h2o_restricted()) has passed ../src/testimpl/test_ras.cc(101): info: check compare(ras_energy("hhe_svp_ras_restricted"), reference_ras_energy_hhe_restricted()) has passed ../src/testimpl/test_ras.cc(99): Leaving test case "RESTRICTED"; testing time: 349174us ../src/testimpl/test_ras.cc(92): Leaving test suite "TEST_RAS"; testing time: 929456us ../src/testimpl/test_nevpt2.cc(58): Entering test suite "TEST_NEVPT2" ../src/testimpl/test_nevpt2.cc(60): Entering test case "NEVPT2" ../src/testimpl/test_nevpt2.cc(61): info: check compare(nevpt2_energy("h2o_svp_nevpt2"), -76.0205249495) has passed ../src/testimpl/test_nevpt2.cc(60): Leaving test case "NEVPT2"; testing time: 907923us ../src/testimpl/test_nevpt2.cc(58): Leaving test suite "TEST_NEVPT2"; testing time: 907955us ../src/testimpl/test_force.cc(102): Entering test suite "TEST_FORCE" ../src/testimpl/test_force.cc(104): Entering test case "Deriv_Coup" ../src/testimpl/test_force.cc(105): info: check compare(run_force("lif_svp_cas_nacme"), reference_cas_nacme(), 1.0e-5) has passed ../src/testimpl/test_force.cc(107): info: check compare(run_force("lif_svp_xmscaspt2_nacme"), reference_xms_nacme(), 1.0e-5) has passed ../src/testimpl/test_force.cc(104): Leaving test case "Deriv_Coup"; testing time: 3221924us ../src/testimpl/test_force.cc(111): Entering test case "Finite_Grad" ../src/testimpl/test_force.cc(112): info: check compare(run_force("hf_mix_dfhf_finite"), reference_scf_finite_mix(), 1.0e-5) has passed ../src/testimpl/test_force.cc(113): info: check compare(run_force("hf_svp_mp2_aux_finite"), reference_svp_mp2_aux_finite(), 1.0e-5) has passed ../src/testimpl/test_force.cc(115): info: check compare(run_force("lif_svp_xmscaspt2_finite"), reference_xms_finite(), 1.0e-5) has passed ../src/testimpl/test_force.cc(111): Leaving test case "Finite_Grad"; testing time: 14696791us ../src/testimpl/test_force.cc(119): Entering test case "Hcore_Grad" ../src/testimpl/test_force.cc(120): info: check compare(run_force("hf_svp_dfhf_dkh_grad"), reference_dkh_grad(), 1.0e-5) has passed ../src/testimpl/test_force.cc(119): Leaving test case "Hcore_Grad"; testing time: 235581us ../src/testimpl/test_force.cc(102): Leaving test suite "TEST_FORCE"; testing time: 18154400us ../src/testimpl/test_opt.cc(146): Entering test suite "TEST_OPT" ../src/testimpl/test_opt.cc(148): Entering test case "DF_HF_Opt" ../src/testimpl/test_opt.cc(149): info: check compare(run_opt("hf_svp_dfhf_opt"), reference_scf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(150): info: check compare(run_opt("hf_svp_dfhf_opt_cart"), reference_scf_opt_cart(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(151): info: check compare(run_opt("hf_mix_dfhf_opt"), reference_scf_opt_mix(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(152): info: check compare(run_opt("oh_svp_uhf_opt"), reference_uhf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(153): info: check compare(run_opt("hc_svp_rohf_opt"), reference_rohf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(154): info: check compare(run_opt("hcl_svp_dfhf_opt"), reference_hcl_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(155): info: check compare(run_opt("hf_svp_coulomb_opt"), reference_dcf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(148): Leaving test case "DF_HF_Opt"; testing time: 6723984us ../src/testimpl/test_opt.cc(158): Entering test case "DF_KS_Opt" ../src/testimpl/test_opt.cc(159): info: check compare(run_opt("hf_svp_b3lyp_opt"), reference_ks_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(158): Leaving test case "DF_KS_Opt"; testing time: 3930985us ../src/testimpl/test_opt.cc(162): Entering test case "MP2_Opt" ../src/testimpl/test_opt.cc(163): info: check compare>(run_opt("hf_svp_mp2_opt"), reference_mp2_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(164): info: check compare>(run_opt("hf_svp_mp2_aux_opt"), reference_mp2_aux_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(162): Leaving test case "MP2_Opt"; testing time: 3122629us ../src/testimpl/test_opt.cc(166): Entering test case "CASSCF_Opt" ../src/testimpl/test_opt.cc(167): info: check compare>(run_opt("hf_svp_cas_opt"), reference_cas_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(168): info: check compare>(run_opt("hf_svp_sacas_opt"), reference_sacas_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(169): info: check compare>(run_opt("ch2_sto3g_meci_opt"),reference_ch2_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(166): Leaving test case "CASSCF_Opt"; testing time: 7913990us ../src/testimpl/test_opt.cc(146): Leaving test suite "TEST_OPT"; testing time: 21691733us ../src/testimpl/test_localize.cc(75): Entering test suite "TEST_LOCALIZE" ../src/testimpl/test_localize.cc(77): Entering test case "PML" ../src/testimpl/test_localize.cc(78): info: check compare(localization("benzene_sto3g_pml"),0.7951349703, 0.000001) has passed ../src/testimpl/test_localize.cc(79): info: check compare(localization("watertrimer_sto3g_pml_region"),0.9999109690, 0.000001) has passed ../src/testimpl/test_localize.cc(77): Leaving test case "PML"; testing time: 717529us ../src/testimpl/test_localize.cc(82): Entering test case "REGION" ../src/testimpl/test_localize.cc(83): info: check compare(localization("watertrimer_sto3g_rl"), 0.0) has passed ../src/testimpl/test_localize.cc(82): Leaving test case "REGION"; testing time: 155282us ../src/testimpl/test_localize.cc(75): Leaving test suite "TEST_LOCALIZE"; testing time: 872872us ../src/testimpl/test_asd.cc(162): Entering test suite "TEST_ASD" ../src/testimpl/test_asd.cc(164): Entering test case "CAS" ../src/testimpl/test_asd.cc(165): info: check compare(asd_energy("benzene_sto3g_asd_stack"), -459.40037137, 1.0e-6) has passed ../src/testimpl/test_asd.cc(166): info: check compare(asd_energy("benzene_sto3g_asd_T"), -459.36294726, 1.0e-6) has passed ../src/testimpl/test_asd.cc(164): Leaving test case "CAS"; testing time: 27166021us ../src/testimpl/test_asd.cc(169): Entering test case "RAS" ../src/testimpl/test_asd.cc(170): info: check compare(asd_models("benzene_sto3g_asd-ras_stack"), std::vector{{ 0.000000000, 0.000047060, 0.000047060, 0.000000000, -0.001758099, 0.001599564, 0.001599564, -0.001758099 }}, 1.0e-6) has passed ../src/testimpl/test_asd.cc(169): Leaving test case "RAS"; testing time: 11491135us ../src/testimpl/test_asd.cc(162): Leaving test suite "TEST_ASD"; testing time: 38657228us ../src/testimpl/test_asd_dmrg.cc(68): Entering test suite "TEST_ASD_DMRG" ../src/testimpl/test_asd_dmrg.cc(70): Entering test case "RASD_DMRG" ../src/testimpl/test_asd_dmrg.cc(71): info: check compare(asd_dmrg_energy("he3_svp_asd-dmrg"), -8.59391356, 1.0e-8) has passed ../src/testimpl/test_asd_dmrg.cc(70): Leaving test case "RASD_DMRG"; testing time: 15805408us ../src/testimpl/test_asd_dmrg.cc(68): Leaving test suite "TEST_ASD_DMRG"; testing time: 15805441us ../src/testimpl/test_london.cc(67): Entering test suite "TEST_LONDON" ../src/testimpl/test_london.cc(69): Entering test case "LONDON" ../src/testimpl/test_london.cc(70): info: check compare(london_energy("hf_svp_london_hf"), -99.70397733) has passed ../src/testimpl/test_london.cc(71): info: check compare(london_energy("hf_svp_london_dfhf"), -99.70391005) has passed ../src/testimpl/test_london.cc(72): info: check compare(london_energy("hf_svp_common_dfhf"), -98.55057515) has passed ../src/testimpl/test_london.cc(73): info: check compare(london_energy("hf_svp_london_coulomb"), -99.82461004) has passed ../src/testimpl/test_london.cc(74): info: check compare(london_energy("hf_svp_london_gaunt"), -99.81352977) has passed ../src/testimpl/test_london.cc(75): info: check compare(london_energy("hcl_svp_london_coulomb"), -459.16442992) has passed ../src/testimpl/test_london.cc(76): info: check compare(london_energy("hcl_svp_common_coulomb"), -457.89462676) has passed ../src/testimpl/test_london.cc(77): info: check compare(london_energy("hcl_svp_common_gaunt"), -454.55922514) has passed ../src/testimpl/test_london.cc(69): Leaving test case "LONDON"; testing time: 81356971us ../src/testimpl/test_london.cc(67): Leaving test suite "TEST_LONDON"; testing time: 81357018us ../src/testimpl/test_pseudospin.cc(96): Entering test suite "TEST_PSEUDOSPIN" ../src/testimpl/test_pseudospin.cc(98): Entering test case "ZFSPLITTING" Test case TEST_PSEUDOSPIN/ZFSPLITTING did not check any assertions ../src/testimpl/test_pseudospin.cc(98): Leaving test case "ZFSPLITTING"; testing time: 549us ../src/testimpl/test_pseudospin.cc(96): Leaving test suite "TEST_PSEUDOSPIN"; testing time: 597us ../src/testimpl/test_smith.cc(59): Entering test suite "TEST_SMITH" ../src/testimpl/test_smith.cc(61): Entering test case "CASPT2_Opt" ../src/testimpl/test_smith.cc(62): info: check compare(run_force("li2_svp_caspt2_grad"), reference_noshift(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(63): info: check compare(run_force("li2_svp_caspt2_shift"), reference_shift(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(64): info: check compare(run_force("lif_svp_mscaspt2_grad"), reference_ms(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(65): info: check compare(run_force("lif_svp_xmscaspt2_grad"), reference_xms(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(66): info: check compare(run_force("lif_svp_xmscaspt2_grad_imag"), reference_xms_imag(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(61): Leaving test case "CASPT2_Opt"; testing time: 49312740us ../src/testimpl/test_smith.cc(59): Leaving test suite "TEST_SMITH"; testing time: 49312779us ../src/testimpl/test_response.cc(67): Entering test suite "TEST_RESPONSE" ../src/testimpl/test_response.cc(69): Entering test case "CIS" ../src/testimpl/test_response.cc(70): info: check compare>(cis_energy("hf_svp_cis"), hf_svp_cis_ref(), 1.0e-6) has passed ../src/testimpl/test_response.cc(69): Leaving test case "CIS"; testing time: 1478584us ../src/testimpl/test_response.cc(67): Leaving test suite "TEST_RESPONSE"; testing time: 1478627us Leaving test module "Suites"; testing time: 349482547us  *** No errors detected make[1]: Leaving directory '/build/bagel-1.2.2' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --max-parallel=1 --with autoreconf dh_testroot -O--max-parallel=1 dh_prep -O--max-parallel=1 dh_installdirs -O--max-parallel=1 debian/rules override_dh_auto_install make[1]: Entering directory '/build/bagel-1.2.2' dh_auto_install --destdir=/build/bagel-1.2.2/debian/tmp make -j1 install DESTDIR=/build/bagel-1.2.2/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/bagel-1.2.2' Making install in src make[3]: Entering directory '/build/bagel-1.2.2/src' Making install in util make[4]: Entering directory '/build/bagel-1.2.2/src/util' Making install in parallel make[5]: Entering directory '/build/bagel-1.2.2/src/util/parallel' make[6]: Entering directory '/build/bagel-1.2.2/src/util/parallel' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/util/parallel' make[5]: Leaving directory '/build/bagel-1.2.2/src/util/parallel' Making install in io make[5]: Entering directory '/build/bagel-1.2.2/src/util/io' make[6]: Entering directory '/build/bagel-1.2.2/src/util/io' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/util/io' make[5]: Leaving directory '/build/bagel-1.2.2/src/util/io' Making install in input make[5]: Entering directory '/build/bagel-1.2.2/src/util/input' make[6]: Entering directory '/build/bagel-1.2.2/src/util/input' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/util/input' make[5]: Leaving directory '/build/bagel-1.2.2/src/util/input' Making install in math make[5]: Entering directory '/build/bagel-1.2.2/src/util/math' make[6]: Entering directory '/build/bagel-1.2.2/src/util/math' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/util/math' make[5]: Leaving directory '/build/bagel-1.2.2/src/util/math' make[5]: Entering directory '/build/bagel-1.2.2/src/util' make[6]: Entering directory '/build/bagel-1.2.2/src/util' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/util' make[5]: Leaving directory '/build/bagel-1.2.2/src/util' make[4]: Leaving directory '/build/bagel-1.2.2/src/util' Making install in molecule make[4]: Entering directory '/build/bagel-1.2.2/src/molecule' make[5]: Entering directory '/build/bagel-1.2.2/src/molecule' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/molecule' make[4]: Leaving directory '/build/bagel-1.2.2/src/molecule' Making install in integral make[4]: Entering directory '/build/bagel-1.2.2/src/integral' make[5]: Entering directory '/build/bagel-1.2.2/src/integral' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/integral' make[4]: Leaving directory '/build/bagel-1.2.2/src/integral' Making install in df make[4]: Entering directory '/build/bagel-1.2.2/src/df' make[5]: Entering directory '/build/bagel-1.2.2/src/df' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/df' make[4]: Leaving directory '/build/bagel-1.2.2/src/df' Making install in opt make[4]: Entering directory '/build/bagel-1.2.2/src/opt' make[5]: Entering directory '/build/bagel-1.2.2/src/opt' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/opt' make[4]: Leaving directory '/build/bagel-1.2.2/src/opt' Making install in grad make[4]: Entering directory '/build/bagel-1.2.2/src/grad' make[5]: Entering directory '/build/bagel-1.2.2/src/grad' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/grad' make[4]: Leaving directory '/build/bagel-1.2.2/src/grad' Making install in pt2 make[4]: Entering directory '/build/bagel-1.2.2/src/pt2' make[5]: Entering directory '/build/bagel-1.2.2/src/pt2' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/pt2' make[4]: Leaving directory '/build/bagel-1.2.2/src/pt2' Making install in wfn make[4]: Entering directory '/build/bagel-1.2.2/src/wfn' make[5]: Entering directory '/build/bagel-1.2.2/src/wfn' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/wfn' make[4]: Leaving directory '/build/bagel-1.2.2/src/wfn' Making install in scf make[4]: Entering directory '/build/bagel-1.2.2/src/scf' make[5]: Entering directory '/build/bagel-1.2.2/src/scf' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/scf' make[4]: Leaving directory '/build/bagel-1.2.2/src/scf' Making install in multi make[4]: Entering directory '/build/bagel-1.2.2/src/multi' Making install in casscf make[5]: Entering directory '/build/bagel-1.2.2/src/multi/casscf' make[6]: Entering directory '/build/bagel-1.2.2/src/multi/casscf' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/multi/casscf' make[5]: Leaving directory '/build/bagel-1.2.2/src/multi/casscf' Making install in zcasscf make[5]: Entering directory '/build/bagel-1.2.2/src/multi/zcasscf' make[6]: Entering directory '/build/bagel-1.2.2/src/multi/zcasscf' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/multi/zcasscf' make[5]: Leaving directory '/build/bagel-1.2.2/src/multi/zcasscf' make[5]: Entering directory '/build/bagel-1.2.2/src/multi' make[6]: Entering directory '/build/bagel-1.2.2/src/multi' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/multi' make[5]: Leaving directory '/build/bagel-1.2.2/src/multi' make[4]: Leaving directory '/build/bagel-1.2.2/src/multi' Making install in smith make[4]: Entering directory '/build/bagel-1.2.2/src/smith' make[5]: Entering directory '/build/bagel-1.2.2/src/smith' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/smith' make[4]: Leaving directory '/build/bagel-1.2.2/src/smith' Making install in prop make[4]: Entering directory '/build/bagel-1.2.2/src/prop' make[5]: Entering directory '/build/bagel-1.2.2/src/prop' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/prop' make[4]: Leaving directory '/build/bagel-1.2.2/src/prop' Making install in ci make[4]: Entering directory '/build/bagel-1.2.2/src/ci' Making install in ciutil make[5]: Entering directory '/build/bagel-1.2.2/src/ci/ciutil' make[6]: Entering directory '/build/bagel-1.2.2/src/ci/ciutil' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/ci/ciutil' make[5]: Leaving directory '/build/bagel-1.2.2/src/ci/ciutil' Making install in fci make[5]: Entering directory '/build/bagel-1.2.2/src/ci/fci' make[6]: Entering directory '/build/bagel-1.2.2/src/ci/fci' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/ci/fci' make[5]: Leaving directory '/build/bagel-1.2.2/src/ci/fci' Making install in ras make[5]: Entering directory '/build/bagel-1.2.2/src/ci/ras' make[6]: Entering directory '/build/bagel-1.2.2/src/ci/ras' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/ci/ras' make[5]: Leaving directory '/build/bagel-1.2.2/src/ci/ras' Making install in zfci make[5]: Entering directory '/build/bagel-1.2.2/src/ci/zfci' make[6]: Entering directory '/build/bagel-1.2.2/src/ci/zfci' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/ci/zfci' make[5]: Leaving directory '/build/bagel-1.2.2/src/ci/zfci' make[5]: Entering directory '/build/bagel-1.2.2/src/ci' make[6]: Entering directory '/build/bagel-1.2.2/src/ci' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/ci' make[5]: Leaving directory '/build/bagel-1.2.2/src/ci' make[4]: Leaving directory '/build/bagel-1.2.2/src/ci' Making install in response make[4]: Entering directory '/build/bagel-1.2.2/src/response' make[5]: Entering directory '/build/bagel-1.2.2/src/response' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/response' make[4]: Leaving directory '/build/bagel-1.2.2/src/response' Making install in asd make[4]: Entering directory '/build/bagel-1.2.2/src/asd' Making install in dmrg make[5]: Entering directory '/build/bagel-1.2.2/src/asd/dmrg' make[6]: Entering directory '/build/bagel-1.2.2/src/asd/dmrg' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/asd/dmrg' make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/dmrg' Making install in dimer make[5]: Entering directory '/build/bagel-1.2.2/src/asd/dimer' make[6]: Entering directory '/build/bagel-1.2.2/src/asd/dimer' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/asd/dimer' make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/dimer' Making install in multisite make[5]: Entering directory '/build/bagel-1.2.2/src/asd/multisite' make[6]: Entering directory '/build/bagel-1.2.2/src/asd/multisite' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/asd/multisite' make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/multisite' Making install in orbital make[5]: Entering directory '/build/bagel-1.2.2/src/asd/orbital' make[6]: Entering directory '/build/bagel-1.2.2/src/asd/orbital' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/asd/orbital' make[5]: Leaving directory '/build/bagel-1.2.2/src/asd/orbital' make[5]: Entering directory '/build/bagel-1.2.2/src/asd' make[6]: Entering directory '/build/bagel-1.2.2/src/asd' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-1.2.2/src/asd' make[5]: Leaving directory '/build/bagel-1.2.2/src/asd' make[4]: Leaving directory '/build/bagel-1.2.2/src/asd' Making install in mat1e make[4]: Entering directory '/build/bagel-1.2.2/src/mat1e' make[5]: Entering directory '/build/bagel-1.2.2/src/mat1e' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-1.2.2/src/mat1e' make[4]: Leaving directory '/build/bagel-1.2.2/src/mat1e' Making install in basis make[4]: Entering directory '/build/bagel-1.2.2/src/basis' make[5]: Entering directory '/build/bagel-1.2.2/src/basis' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/bagel-1.2.2/debian/tmp/usr/share/bagel' /usr/bin/install -c -m 644 3-21g.json 6-31g.json ano-rcc.json aug-cc-pv5z.json aug-cc-pv6z.json aug-cc-pvdz.json aug-cc-pvqz.json aug-cc-pvtz.json cc-pv5z-jkfit.json cc-pv5z-ri.json cc-pv5z.json cc-pv6z.json cc-pvdz-jkfit.json cc-pvdz-ri.json cc-pvdz.json cc-pvqz-jkfit.json cc-pvqz-ri.json cc-pvqz.json cc-pvtz-jkfit.json cc-pvtz-ri.json cc-pvtz.json complete.json def2-SVP-2c-ecp.json def2-SVP-ecp.json ecp10mdf.json ecp28mdf.json ecp46mdf.json ecp60mdf.json ecp78mdf.json lanl2dz-ecp.json qzvpp-jkfit.json qzvpp.json sto-3g.json svp-jkfit.json svp.json tzvpp-jkfit.json tzvpp.json aug-cc-pcv5z.json aug-cc-pcvqz.json aug-cc-pwcvdz.json '/build/bagel-1.2.2/debian/tmp/usr/share/bagel' /usr/bin/install -c -m 644 cc-pcv5z.json cc-pvdz-dk.json d-aug-cc-pvqz.json aug-cc-pcvdz-dk.json aug-cc-pcvtz-dk.json aug-cc-pwcvqz.json cc-pcvdz.json cc-pvtz-dk.json d-aug-cc-pvtz.json aug-cc-pcvdz.json aug-cc-pcvtz.json aug-cc-pwcvtz.json cc-pcvqz.json d-aug-cc-pv5z.json aug-cc-pcvqz-dk.json aug-cc-pwcv5z.json cc-pcvtz.json d-aug-cc-pvdz.json '/build/bagel-1.2.2/debian/tmp/usr/share/bagel' make[5]: Leaving directory '/build/bagel-1.2.2/src/basis' make[4]: Leaving directory '/build/bagel-1.2.2/src/basis' make[4]: Entering directory '/build/bagel-1.2.2/src' make[5]: Entering directory '/build/bagel-1.2.2/src' /bin/mkdir -p '/build/bagel-1.2.2/debian/tmp/usr/lib/bagel' /bin/bash ../libtool --mode=install /usr/bin/install -c libbagel.la '/build/bagel-1.2.2/debian/tmp/usr/lib/bagel' libtool: install: /usr/bin/install -c .libs/libbagel.lai /build/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.la libtool: install: /usr/bin/install -c .libs/libbagel.a /build/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.a libtool: install: chmod 644 /build/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.a libtool: install: ranlib /build/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.a libtool: warning: remember to run 'libtool --finish /usr/lib/bagel' /bin/mkdir -p '/build/bagel-1.2.2/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c BAGEL '/build/bagel-1.2.2/debian/tmp/usr/bin' libtool: install: /usr/bin/install -c BAGEL /build/bagel-1.2.2/debian/tmp/usr/bin/BAGEL /bin/mkdir -p '/build/bagel-1.2.2/debian/tmp/usr/include' /usr/bin/install -c -m 644 bagel.h '/build/bagel-1.2.2/debian/tmp/usr/include' make[5]: Leaving directory '/build/bagel-1.2.2/src' make[4]: Leaving directory '/build/bagel-1.2.2/src' make[3]: Leaving directory '/build/bagel-1.2.2/src' make[3]: Entering directory '/build/bagel-1.2.2' make[4]: Entering directory '/build/bagel-1.2.2' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/bagel-1.2.2' make[3]: Leaving directory '/build/bagel-1.2.2' make[2]: Leaving directory '/build/bagel-1.2.2' (cd docs; cp -a _static _images searchindex.js /build/bagel-1.2.2/debian/bagel/usr/share/doc/bagel/html) (cd docs; cp --parents `find -name \*.html*` /build/bagel-1.2.2/debian/bagel/usr/share/doc/bagel/html) make[1]: Leaving directory '/build/bagel-1.2.2' dh_install -O--max-parallel=1 dh_installdocs -O--max-parallel=1 debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/bagel-1.2.2' dh_installchangelogs -XChangeLog make[1]: Leaving directory '/build/bagel-1.2.2' dh_installexamples -O--max-parallel=1 dh_installinit -O--max-parallel=1 dh_installsystemduser -O--max-parallel=1 dh_perl -O--max-parallel=1 dh_link -O--max-parallel=1 dh_strip_nondeterminism -O--max-parallel=1 dh_compress -O--max-parallel=1 dh_fixperms -O--max-parallel=1 dh_missing -O--max-parallel=1 dh_missing: warning: usr/include/bagel.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/bagel/libbagel.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/bagel/libbagel.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: bagel (2) * dh_installdocs: bagel (0) * dh_installexamples: bagel (93) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz -O--max-parallel=1 dh_strip -O--max-parallel=1 dh_makeshlibs -O--max-parallel=1 dh_shlibdeps -O--max-parallel=1 dh_installdeb -O--max-parallel=1 dh_gencontrol -O--max-parallel=1 dh_md5sums -O--max-parallel=1 dh_builddeb -O--max-parallel=1 dpkg-deb: building package 'bagel' in '../bagel_1.2.2-2_amd64.deb'. dpkg-deb: building package 'bagel-dbgsym' in '../bagel-dbgsym_1.2.2-2_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../bagel_1.2.2-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/516309 and its subdirectories I: Current time: Thu Jan 5 16:27:37 -12 2023 I: pbuilder-time-stamp: 1672979257 Fri Jan 6 04:27:39 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Fri Jan 6 04:27:39 UTC 2023 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Fri Jan 6 08:21:27 UTC 2023 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Fri Jan 6 08:21:28 UTC 2023 I: bagel_1.2.2-2_amd64.changes: Format: 1.8 Date: Fri, 12 Mar 2021 13:49:59 +0100 Source: bagel Binary: bagel bagel-dbgsym Architecture: amd64 Version: 1.2.2-2 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Michael Banck Description: bagel - Computational Chemistry Package Closes: 811449 942912 Changes: bagel (1.2.2-2) unstable; urgency=medium . [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. . [ Daniel Leidert ] * d/compat: Raise to 12. * d/control (Build-Depends): Raise debhelper to version 12. Use python3-dev instead of python-dev (closes: #942912). (Standards-Version): Bump to 4.4.1. (Architecture): Limit to 64bit architectures (closes: #811449). Checksums-Sha1: 0f8060cef0ff770f8bc4d4b76395558529154b67 77473324 bagel-dbgsym_1.2.2-2_amd64.deb 552d6b528ecb6306eb0122e715f9727d6422a304 7006 bagel_1.2.2-2_amd64.buildinfo f2c67fb3da08a38919e461df1db29a4898661b99 35420360 bagel_1.2.2-2_amd64.deb Checksums-Sha256: c76a66db56561e3af958325ed4bc0adaa7cb66e534301f4fcd44ea9ebe96c028 77473324 bagel-dbgsym_1.2.2-2_amd64.deb d939f3a1ddf5c456bbe3fefd6489bfbc4052295cc1610acf569dbf1f4f2a05b7 7006 bagel_1.2.2-2_amd64.buildinfo f349991f95d29d650620522566ac4f8586fa931191fecbe68ea6186cc6a68eb1 35420360 bagel_1.2.2-2_amd64.deb Files: 05058af44e014bf5e229d286578c9416 77473324 debug optional bagel-dbgsym_1.2.2-2_amd64.deb 72e41277496a4b6dd0f89517fe87a6b8 7006 science optional bagel_1.2.2-2_amd64.buildinfo 47ddb23a4c6a14489cd5710484500e51 35420360 science optional bagel_1.2.2-2_amd64.deb Fri Jan 6 08:21:31 UTC 2023 I: diffoscope 228 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.sGhRU8OE/bagel_1.2.2-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.sGhRU8OE/bagel_1.2.2-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.sGhRU8OE/bagel_1.2.2-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.sGhRU8OE/b1/bagel_1.2.2-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.sGhRU8OE/b2/bagel_1.2.2-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 7.446s) 7.446s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 3.809s) 3.808s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Fri Jan 6 08:21:39 UTC 2023 I: diffoscope 228 found no differences in the changes files, and a .buildinfo file also exists. Fri Jan 6 08:21:39 UTC 2023 I: bagel from bullseye built successfully and reproducibly on amd64. Fri Jan 6 08:21:41 UTC 2023 I: Submitting .buildinfo files to external archives: Fri Jan 6 08:21:41 UTC 2023 I: Submitting 8.0K b1/bagel_1.2.2-2_amd64.buildinfo.asc Fri Jan 6 08:21:41 UTC 2023 I: Submitting 8.0K b2/bagel_1.2.2-2_amd64.buildinfo.asc Fri Jan 6 08:21:42 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Jan 6 08:21:42 UTC 2023 I: Done submitting .buildinfo files. Fri Jan 6 08:21:42 UTC 2023 I: Removing signed bagel_1.2.2-2_amd64.buildinfo.asc files: removed './b1/bagel_1.2.2-2_amd64.buildinfo.asc' removed './b2/bagel_1.2.2-2_amd64.buildinfo.asc'