Thu Nov 18 17:08:15 UTC 2021 I: starting to build tandem-mass/bullseye/amd64 on jenkins on '2021-11-18 17:07' Thu Nov 18 17:08:15 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_26/86444/console.log Thu Nov 18 17:08:15 UTC 2021 I: Downloading source for bullseye/tandem-mass=1:201702011-1 --2021-11-18 17:08:15-- http://cdn-fastly.deb.debian.org/debian/pool/main/t/tandem-mass/tandem-mass_201702011-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2031 (2.0K) Saving to: ‘tandem-mass_201702011-1.dsc’ 0K . 100% 189M=0s 2021-11-18 17:08:15 (189 MB/s) - ‘tandem-mass_201702011-1.dsc’ saved [2031/2031] Thu Nov 18 17:08:15 UTC 2021 I: tandem-mass_201702011-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: tandem-mass Binary: tandem-mass Architecture: any Version: 1:201702011-1 Maintainer: The Debichem Group Uploaders: Filippo Rusconi Homepage: http://www.thegpm.org/TANDEM/ Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/debichem-team/tandem-mass.git Vcs-Git: https://salsa.debian.org/debichem-team/tandem-mass.git Build-Depends: debhelper (>= 9.20151219), dpkg-dev (>= 1.16.1~), libexpat1-dev (>= 2.0.1) Package-List: tandem-mass deb science optional arch=any Checksums-Sha1: f91dbc532612bf55a8b18c403d6e68628f8adb11 2665884 tandem-mass_201702011.orig.tar.gz acb136a7561bcf48fd0d4cecc3d8d8dacd0cc8c8 13900 tandem-mass_201702011-1.debian.tar.xz Checksums-Sha256: 073f50fd86d11bdb4fcd4811fc8245516ec81ab4e13a6ecef37792d684247ae8 2665884 tandem-mass_201702011.orig.tar.gz 7bce4e25599a224baafcb9afb010eb79f7b8a22a4cde3f3fa5ad2fccdd8ae540 13900 tandem-mass_201702011-1.debian.tar.xz Files: 901c94dc228f51124ed60cbcfa97da4b 2665884 tandem-mass_201702011.orig.tar.gz 07feb5f8792050b987e676b2df7bbeeb 13900 tandem-mass_201702011-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEsFMwThfW1Bndm0ZRQatITXaUz0IFAlvxIL4ACgkQQatITXaU z0KHaQ//fap2mfsQ9jd+I/CCCcfAlGgL9GNhHWhnUHh728e1Y9Q9ht6asYB5Qmqj YeXrDcwtfkpMN+BR7cJV/+XnaMkQvGDn3VvbRd0+HtlZzOJQ+19XPXBZQiKkZE+d 3xPKo6Rokh+gBzatYWos6DDA6JefWJVPU+OoDb5MG6bVLN2MdxZqW48uT/vjYe+d 8Yv6mUw7BBYbfnJ+eBrkEpXaYwvMpcnhXIU5YLbdjvJcyWiISFpohHy4EA57dLQ/ r03rf+Xe98G1hfsPxurHxsz+J5w6BRPMEIjGCfazDO2yZ2myzall0AGHpH57AnRr 5c5StI1Z7AowkGY6KawAcEqGDNKh7SLFKyOC6Uqgtvg9SNU/HJZsn99Ogxgj1akg V7Nwh0wDLi/TvwHDKfPEppQdTs5CzzsjHpVVCykel+BBZHcyFpCTcl6i7buecZrn PeqBfenYC4L1TQztkUl6X2uRE3p4V/4CLvOCq6QMX7A+6T/Z4OTkA8Xa7y35rUzS mY7NTrJ+5PL+21r5P5ganp//gD/4NBhIJ4GpNXoG6aupnWm/p5+bwokBjHqWQsCB wlr+JjnGagkZ50jWjHmOvORGH0DMkMfhu3A3S5+1Z+Be16uViR2d/Lb/7rTtqFbg DZTdaEf2ip2q+R/vGmLP6+sVcEhIfmGSZ86PeHu6gis2Y0DrGjo= =NqYV -----END PGP SIGNATURE----- Thu Nov 18 17:08:15 UTC 2021 I: Checking whether the package is not for us Thu Nov 18 17:08:15 UTC 2021 I: Starting 1st build on remote node ionos5-amd64.debian.net. Thu Nov 18 17:08:15 UTC 2021 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Thu Nov 18 17:10:42 UTC 2021 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 21 11:31:25 -12 2022 I: pbuilder-time-stamp: 1671665485 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [tandem-mass_201702011-1.dsc] I: copying [./tandem-mass_201702011.orig.tar.gz] I: copying [./tandem-mass_201702011-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.JyBY4DLR/trustedkeys.kbx': General error gpgv: Signature made Sat Nov 17 20:20:14 2018 -12 gpgv: using RSA key B053304E17D6D419DD9B465141AB484D7694CF42 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./tandem-mass_201702011-1.dsc dpkg-source: info: extracting tandem-mass in tandem-mass-201702011 dpkg-source: info: unpacking tandem-mass_201702011.orig.tar.gz dpkg-source: info: unpacking tandem-mass_201702011-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian-makefile dpkg-source: info: applying fix-missing-include-string-h dpkg-source: info: applying nullptr-fixes I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/487322/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3be94de99e7c4fabac9448075733de7b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='487322' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.avY57JHnDh/pbuilderrc_PyPp --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.avY57JHnDh/b1 --logfile b1/build.log tandem-mass_201702011-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos5-amd64 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Aug 4 2021 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Jul 28 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 69032 Jul 28 2021 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 98048 Mar 2 2021 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Jul 28 2021 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Jul 28 2021 more -rwsr-xr-x 1 root root 55528 Jul 28 2021 mount -rwxr-xr-x 1 root root 18664 Jul 28 2021 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 2021 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Nov 23 06:04 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Jul 28 2021 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jul 28 2021 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Jul 28 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/487322/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9.20151219), dpkg-dev (>= 1.16.1~), libexpat1-dev (>= 2.0.1) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 9.20151219); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libexpat1-dev (>= 2.0.1); however: Package libexpat1-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 33 newly installed, 0 to remove and 0 not upgraded. Need to get 18.5 MB of archives. After unpacking 69.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2 [96.9 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libexpat1-dev amd64 2.2.10-2 [140 kB] Fetched 18.5 MB in 0s (60.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8_amd64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../07-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../10-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../23-libelf1_0.183-1_amd64.deb ... Unpacking libelf1:amd64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.13+20210201-1_amd64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../25-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../26-libxml2_2.9.10+dfsg-6.7_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-4_amd64.deb ... Unpacking gettext (0.21-4) ... 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Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libexpat1-dev:amd64 (2.2.10-2) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:amd64 (0.183-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-13+deb11u2) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/tandem-mass-201702011/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../tandem-mass_201702011-1_source.changes dpkg-buildpackage: info: source package tandem-mass dpkg-buildpackage: info: source version 1:201702011-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh_testdir dh_testroot dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ dh_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use) rm -f -- debian/tandem-mass.substvars debian/files rm -fr -- debian/tandem-mass/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -f bin/tandem rm -f src/*.d src/*.o rm -f build-stamp debian/rules build dh_testdir dh_prep rm -f -- debian/tandem-mass.substvars rm -fr -- debian/.debhelper/generated/tandem-mass/ debian/tandem-mass/ debian/tmp/ dh_auto_build --sourcedirectory=src --buildsystem=makefile -- -f Makefile_ubuntu dh_auto_build: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd src && make -j1 -f Makefile_ubuntu make[1]: Entering directory '/build/tandem-mass-201702011/src' g++ -M -g -w -O2 xmltaxonomy.cpp > xmltaxonomy.d g++ -M -g -w -O2 xmltaxonomy.cpp | sed s/\\.o/.d/ > xmltaxonomy.d g++ -M -g -w -O2 xmlparameter.cpp > xmlparameter.d g++ -M -g -w -O2 xmlparameter.cpp | sed s/\\.o/.d/ > xmlparameter.d g++ -M -g -w -O2 tandem.cpp > tandem.d g++ -M -g -w -O2 tandem.cpp | sed s/\\.o/.d/ > tandem.d g++ -M -g -w -O2 stdafx.cpp > stdafx.d g++ -M -g -w -O2 stdafx.cpp | sed s/\\.o/.d/ > stdafx.d g++ -M -g -w -O2 saxtaxhandler.cpp > saxtaxhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp | sed s/\\.o/.d/ > saxtaxhandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp > saxtandeminputhandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp | sed s/\\.o/.d/ > saxtandeminputhandler.d g++ -M -g -w -O2 saxsaphandler.cpp > saxsaphandler.d g++ -M -g -w -O2 saxsaphandler.cpp | sed s/\\.o/.d/ > saxsaphandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp > saxmzxmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp | sed s/\\.o/.d/ > saxmzxmlhandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp > saxmzmlhandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp | sed s/\\.o/.d/ > saxmzmlhandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp > saxmzdatahandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp | sed s/\\.o/.d/ > saxmzdatahandler.d g++ -M -g -w -O2 saxmodhandler.cpp > saxmodhandler.d g++ -M -g -w -O2 saxmodhandler.cpp | sed s/\\.o/.d/ > saxmodhandler.d g++ -M -g -w -O2 saxhandler.cpp > saxhandler.d g++ -M -g -w -O2 saxhandler.cpp | sed s/\\.o/.d/ > saxhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp > saxgamlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp | sed s/\\.o/.d/ > saxgamlhandler.d g++ -M -g -w -O2 saxbiomlhandler.cpp > saxbiomlhandler.d g++ -M -g -w -O2 saxbiomlhandler.cpp | sed s/\\.o/.d/ > saxbiomlhandler.d g++ -M -g -w -O2 p3msequenceserver.cpp > p3msequenceserver.d g++ -M -g -w -O2 p3msequenceserver.cpp | sed s/\\.o/.d/ > p3msequenceserver.d g++ -M -g -w -O2 p3mprocess.cpp > p3mprocess.d g++ -M -g -w -O2 p3mprocess.cpp | sed s/\\.o/.d/ > p3mprocess.d g++ -M -g -w -O2 p3.cpp > p3.d g++ -M -g -w -O2 p3.cpp | sed s/\\.o/.d/ > p3.d g++ -M -g -w -O2 mzid_report.cpp > mzid_report.d g++ -M -g -w -O2 mzid_report.cpp | sed s/\\.o/.d/ > mzid_report.d g++ -M -g -w -O2 mxxcleavage.cpp > mxxcleavage.d g++ -M -g -w -O2 mxxcleavage.cpp | sed s/\\.o/.d/ > mxxcleavage.d g++ -M -g -w -O2 mtermmods.cpp > mtermmods.d g++ -M -g -w -O2 mtermmods.cpp | sed s/\\.o/.d/ > mtermmods.d g++ -M -g -w -O2 mspectrumcondition.cpp > mspectrumcondition.d g++ -M -g -w -O2 mspectrumcondition.cpp | sed s/\\.o/.d/ > mspectrumcondition.d g++ -M -g -w -O2 msequtilities.cpp > msequtilities.d g++ -M -g -w -O2 msequtilities.cpp | sed s/\\.o/.d/ > msequtilities.d g++ -M -g -w -O2 msequenceserver.cpp > msequenceserver.d g++ -M -g -w -O2 msequenceserver.cpp | sed s/\\.o/.d/ > msequenceserver.d g++ -M -g -w -O2 msequencecollection.cpp > msequencecollection.d g++ -M -g -w -O2 msequencecollection.cpp | sed s/\\.o/.d/ > msequencecollection.d g++ -M -g -w -O2 mscore_tandem.cpp > mscore_tandem.d g++ -M -g -w -O2 mscore_tandem.cpp | sed s/\\.o/.d/ > mscore_tandem.d g++ -M -g -w -O2 mscore.cpp > mscore.d g++ -M -g -w -O2 mscore.cpp | sed s/\\.o/.d/ > mscore.d g++ -M -g -w -O2 mreport.cpp > mreport.d g++ -M -g -w -O2 mreport.cpp | sed s/\\.o/.d/ > mreport.d g++ -M -g -w -O2 mrefine.cpp > mrefine.d g++ -M -g -w -O2 mrefine.cpp | sed s/\\.o/.d/ > mrefine.d g++ -M -g -w -O2 mprocess.cpp > mprocess.d g++ -M -g -w -O2 mprocess.cpp | sed s/\\.o/.d/ > mprocess.d g++ -M -g -w -O2 mpmods.cpp > mpmods.d g++ -M -g -w -O2 mpmods.cpp | sed s/\\.o/.d/ > mpmods.d g++ -M -g -w -O2 mplugin.cpp > mplugin.d g++ -M -g -w -O2 mplugin.cpp | sed s/\\.o/.d/ > mplugin.d g++ -M -g -w -O2 mpam.cpp > mpam.d g++ -M -g -w -O2 mpam.cpp | sed s/\\.o/.d/ > mpam.d g++ -M -g -w -O2 mbiomlreport.cpp > mbiomlreport.d g++ -M -g -w -O2 mbiomlreport.cpp | sed s/\\.o/.d/ > mbiomlreport.d g++ -M -g -w -O2 masscalc.cpp > masscalc.d g++ -M -g -w -O2 masscalc.cpp | sed s/\\.o/.d/ > masscalc.d g++ -M -g -w -O2 loadmspectrum.cpp > loadmspectrum.d g++ -M -g -w -O2 loadmspectrum.cpp | sed s/\\.o/.d/ > loadmspectrum.d g++ -M -g -w -O2 base64.cpp > base64.d g++ -M -g -w -O2 base64.cpp | sed s/\\.o/.d/ > base64.d g++ -M -g -w -O2 MSNumpress.cpp > MSNumpress.d g++ -M -g -w -O2 MSNumpress.cpp | sed s/\\.o/.d/ > MSNumpress.d g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o MSNumpress.o MSNumpress.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o base64.o base64.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loadmspectrum.o loadmspectrum.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o masscalc.o masscalc.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mbiomlreport.o mbiomlreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpam.o mpam.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mplugin.o mplugin.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpmods.o mpmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mprocess.o mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mrefine.o mrefine.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mreport.o mreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore.o mscore.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore_tandem.o mscore_tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequencecollection.o msequencecollection.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequenceserver.o msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequtilities.o msequtilities.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mspectrumcondition.o mspectrumcondition.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mtermmods.o mtermmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mxxcleavage.o mxxcleavage.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mzid_report.o mzid_report.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3.o p3.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3mprocess.o p3mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3msequenceserver.o p3msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxbiomlhandler.o saxbiomlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxgamlhandler.o saxgamlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxhandler.o saxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmodhandler.o saxmodhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzdatahandler.o saxmzdatahandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzmlhandler.o saxmzmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzxmlhandler.o saxmzxmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxsaphandler.o saxsaphandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtandeminputhandler.o saxtandeminputhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtaxhandler.o saxtaxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdafx.o stdafx.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tandem.o tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmlparameter.o xmlparameter.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmltaxonomy.o xmltaxonomy.cpp g++ -g -w -O2 -o ../bin/tandem MSNumpress.o base64.o loadmspectrum.o masscalc.o mbiomlreport.o mpam.o mplugin.o mpmods.o mprocess.o mrefine.o mreport.o mscore.o mscore_tandem.o msequencecollection.o msequenceserver.o msequtilities.o mspectrumcondition.o mtermmods.o mxxcleavage.o mzid_report.o p3.o p3mprocess.o p3msequenceserver.o saxbiomlhandler.o saxgamlhandler.o saxhandler.o saxmodhandler.o saxmzdatahandler.o saxmzmlhandler.o saxmzxmlhandler.o saxsaphandler.o saxtandeminputhandler.o saxtaxhandler.o stdafx.o tandem.o xmlparameter.o xmltaxonomy.o -lpthread -L/usr/lib -lm -lexpat make[1]: Leaving directory '/build/tandem-mass-201702011/src' touch build-stamp fakeroot debian/rules binary dh_testdir dh_testroot dh_installchangelogs dh_installchangelogs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/tandem-mass/usr/share/doc/tandem-mass install -p -m0644 debian/changelog debian/tandem-mass/usr/share/doc/tandem-mass/changelog.Debian dh_installdocs dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/.debhelper/generated/tandem-mass install -p -m0644 debian/copyright debian/tandem-mass/usr/share/doc/tandem-mass/copyright dh_installexamples dh_installexamples: warning: Compatibility levels before 10 are deprecated (level 9 in use) dh_install dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/tandem-mass/usr/bin cp --reflink=auto -a ./bin/tandem debian/tandem-mass/usr/bin/ dh_installman dh_installman: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/tandem-mass/usr/share/man/man1/ install -p -m0644 ./debian/tandem.1 debian/tandem-mass/usr/share/man/man1/tandem.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 mv debian/tandem-mass/usr/share/man/man1/tandem.1.dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 chmod 0644 -- debian/tandem-mass/usr/share/man/man1/tandem.1 dh_lintian dh_lintian: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/tandem-mass/usr/share/lintian/overrides install -p -m0644 debian/tandem-mass.lintian-overrides debian/tandem-mass/usr/share/lintian/overrides/tandem-mass dh_strip -a dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/aa objcopy --only-keep-debug --compress-debug-sections debian/tandem-mass/usr/bin/tandem debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/aa/cb22f4c78070a167cabad470497688a4df4b1b.debug chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/aa/cb22f4c78070a167cabad470497688a4df4b1b.debug chown 0:0 -- debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/aa/cb22f4c78070a167cabad470497688a4df4b1b.debug strip --remove-section=.comment --remove-section=.note debian/tandem-mass/usr/bin/tandem objcopy --add-gnu-debuglink debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/aa/cb22f4c78070a167cabad470497688a4df4b1b.debug debian/tandem-mass/usr/bin/tandem install -d debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc ln -s tandem-mass debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc/tandem-mass-dbgsym dh_compress dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd debian/tandem-mass chmod a-x usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 gzip -9nf usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 cd '/build/tandem-mass-201702011' dh_fixperms find debian/tandem-mass -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/tandem-mass ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tandem-mass/usr/share/doc -type f -a -true -a ! -regex 'debian/tandem-mass/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tandem-mass/usr/share/man debian/tandem-mass/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_installdeb dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/tandem-mass/DEBIAN dh_shlibdeps dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use) dpkg-shlibdeps -Tdebian/tandem-mass.substvars debian/tandem-mass/usr/bin/tandem dh_gencontrol echo misc:Depends= >> debian/tandem-mass.substvars echo misc:Pre-Depends= >> debian/tandem-mass.substvars install -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -Pdebian/.debhelper/tandem-mass/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=tandem-mass-dbgsym "-DDepends=tandem-mass (= \${binary:Version})" "-DDescription=debug symbols for tandem-mass" -DBuild-Ids=aacb22f4c78070a167cabad470497688a4df4b1b -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -Pdebian/tandem-mass chmod 0644 -- debian/tandem-mass/DEBIAN/control chown 0:0 -- debian/tandem-mass/DEBIAN/control dh_md5sums cd debian/tandem-mass >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tandem-mass/DEBIAN/md5sums chown 0:0 -- debian/tandem-mass/DEBIAN/md5sums cd debian/.debhelper/tandem-mass/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/tandem-mass .. dpkg-deb --build debian/.debhelper/tandem-mass/dbgsym-root .. dpkg-deb: building package 'tandem-mass' in '../tandem-mass_201702011-1_amd64.deb'. dpkg-deb: building package 'tandem-mass-dbgsym' in '../tandem-mass-dbgsym_201702011-1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../tandem-mass_201702011-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/487322 and its subdirectories I: Current time: Wed Dec 21 11:33:49 -12 2022 I: pbuilder-time-stamp: 1671665629 Thu Nov 18 17:10:42 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Thu Nov 18 17:10:42 UTC 2021 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Thu Nov 18 17:20:33 UTC 2021 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Thu Nov 18 17:20:34 UTC 2021 I: tandem-mass_201702011-1_amd64.changes: Format: 1.8 Date: Sun, 18 Nov 2018 09:00:11 +0100 Source: tandem-mass Binary: tandem-mass tandem-mass-dbgsym Architecture: amd64 Version: 1:201702011-1 Distribution: unstable Urgency: low Maintainer: The Debichem Group Changed-By: Filippo Rusconi Description: tandem-mass - mass spectrometry software for protein identification Changes: tandem-mass (1:201702011-1) unstable; urgency=low . * Exactly same package as the previous one that could not be uploaded because the package version number was not greater than the former NMU one (of version 1:20170201-0.1). Checksums-Sha1: 613a9fc7be7c76d9dbf68436de7fdd02a33a2ee9 4438436 tandem-mass-dbgsym_201702011-1_amd64.deb 42f116d9ffe4dc1c7fa128474c72a16859d49773 5131 tandem-mass_201702011-1_amd64.buildinfo ed38c9e6038775b4d73b8c1185e185b14ebe66d5 210324 tandem-mass_201702011-1_amd64.deb Checksums-Sha256: fa4b1d55e5d1b1e38ac16dd889fbffcd6c555d670da8eaee14c0d561d95badea 4438436 tandem-mass-dbgsym_201702011-1_amd64.deb cc88cf022842f30d9c7fe95fc9497b3d544cbf56128d8167654d90f59c2a8de7 5131 tandem-mass_201702011-1_amd64.buildinfo 62fa312e197898a961b82debdb7cedf703b4d5eec690adaa88c7d4993a0e9d55 210324 tandem-mass_201702011-1_amd64.deb Files: e81bd60f7c344a46d8cbdde7b11c57a0 4438436 debug optional tandem-mass-dbgsym_201702011-1_amd64.deb ec86c97f6200382445ce3fe20c7f5355 5131 science optional tandem-mass_201702011-1_amd64.buildinfo e752668da6ac4329389c78f4bf6ee18c 210324 science optional tandem-mass_201702011-1_amd64.deb Thu Nov 18 17:20:35 UTC 2021 I: will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.avY57JHnDh/tandem-mass_201702011-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.avY57JHnDh/tandem-mass_201702011-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.avY57JHnDh/tandem-mass_201702011-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.avY57JHnDh/b1/tandem-mass_201702011-1_amd64.changes /srv/reproducible-results/rbuild-debian/tmp.avY57JHnDh/b2/tandem-mass_201702011-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.289s) 0.289s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.064s) 0.064s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu Nov 18 17:20:36 UTC 2021 I: found no differences in the changes files, and a .buildinfo file also exists. Thu Nov 18 17:20:36 UTC 2021 I: tandem-mass from bullseye built successfully and reproducibly on amd64. Thu Nov 18 17:20:37 UTC 2021 I: Submitting .buildinfo files to external archives: Thu Nov 18 17:20:37 UTC 2021 I: Submitting 8.0K b1/tandem-mass_201702011-1_amd64.buildinfo.asc Thu Nov 18 17:20:38 UTC 2021 I: Submitting 8.0K b2/tandem-mass_201702011-1_amd64.buildinfo.asc Thu Nov 18 17:20:38 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Nov 18 17:20:38 UTC 2021 I: Done submitting .buildinfo files. Thu Nov 18 17:20:38 UTC 2021 I: Removing signed tandem-mass_201702011-1_amd64.buildinfo.asc files: removed './b1/tandem-mass_201702011-1_amd64.buildinfo.asc' removed './b2/tandem-mass_201702011-1_amd64.buildinfo.asc'