Sun Jan 7 07:09:49 UTC 2024 I: starting to build cif-tools/bullseye/arm64 on jenkins on '2024-01-07 07:09' Sun Jan 7 07:09:49 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_9/19381/console.log Sun Jan 7 07:09:49 UTC 2024 I: Downloading source for bullseye/cif-tools=1.0.0-3 --2024-01-07 07:09:49-- http://cdn-fastly.deb.debian.org/debian/pool/main/c/cif-tools/cif-tools_1.0.0-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2176 (2.1K) [text/prs.lines.tag] Saving to: ‘cif-tools_1.0.0-3.dsc’ 0K .. 100% 283M=0s 2024-01-07 07:09:49 (283 MB/s) - ‘cif-tools_1.0.0-3.dsc’ saved [2176/2176] Sun Jan 7 07:09:49 UTC 2024 I: cif-tools_1.0.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cif-tools Binary: cif-tools Architecture: any Version: 1.0.0-3 Maintainer: Debian Med Packaging Team Uploaders: Maarten L. Hekkelman Homepage: https://github.com/PDB-REDO/cif-tools Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/cif-tools Vcs-Git: https://salsa.debian.org/med-team/cif-tools.git Testsuite: autopkgtest Testsuite-Triggers: libcifpp-dev Build-Depends: autoconf-archive, debhelper-compat (= 13), libboost-date-time-dev, libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-system-dev, libcifpp-dev, pkg-config Package-List: cif-tools deb science optional arch=any Checksums-Sha1: 73e83a39cdbec13979d585d8e9c3452eb85e8477 108427 cif-tools_1.0.0.orig.tar.gz 874dc3ce79fadbcd9af9ee94a3c34c31b7d05a25 4120 cif-tools_1.0.0-3.debian.tar.xz Checksums-Sha256: 4c3d1d855862ec0c9577a9f215b2fd8cdb12cd32cda80ddc851ce738b5163e6a 108427 cif-tools_1.0.0.orig.tar.gz c527e9967c94fb93843da99718790907d8371d3159dbcc50b683a2a622d5a99d 4120 cif-tools_1.0.0-3.debian.tar.xz Files: ae08b605dc2503fee53d9d4c53f02f2b 108427 cif-tools_1.0.0.orig.tar.gz 570dd4e15a8559473685945f4f34abad 4120 cif-tools_1.0.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAl/F9uMSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHuekP/iVzm2iMTsc4+vINMeabT9hWcotAr6cc AdCLUyjQVgaLECMTamKCq1JDXtH21718nxQSd+bI9PU3OqM6ln7bVNKXdt5o8lI8 L8OlFKApYDi7eRbIbu2/HTJ7PU8hS4Hrb3sv7CXDw/3/Q3kIkDugIyZKmlaZgRSd NKHrfI8MShoAZiK7BaStV9DbuXTTZgVlukUpdASE9x0Bzro5TC732mbzl4bY2Lam 0oRud0oqr/FERH6Z4pPd1WiBjDVwy7EQpt672NF63aYfx/b8pbrWiZleJmFQ1lpI WvuhI3HTolRBQzzWxKpqTPrzkp4X/qbNa7Pwho52qxFBVFT856aZhuccr5KtVmDI 31OSKmY4EK+wLa1Rv7/8i1kZTmZWMdQRqvLqyaDJxK3det9v2hsyCzBDO4b6iDQk Cx1BVN0xubcO/qGmtyqT/6g95L+V4uHC3ex0FbeaHLOD9aNSrJMbHTNw+3l80H9i fqlcTYcR+RgBjjwf6GF+LIW5RHHoYj9lZIoRQhWW/2jxbQN73IB9aN6FXP5l9uvo ScFKYJwqovcYW0boAaRx1KNh5F0j3Sv7CEU/0XbZJhXIHnQMOIDHh8ErZ0mYrzAL /SIbYN4oSeWBXTsby+TU1kr50V/gE3nIvYHi7p0kNCLtIC4yx+lT8XMz8NOt0BPz cgRj2ePSX6xo =12G3 -----END PGP SIGNATURE----- Sun Jan 7 07:09:49 UTC 2024 I: Checking whether the package is not for us Sun Jan 7 07:09:49 UTC 2024 I: Starting 1st build on remote node codethink03-arm64.debian.net. Sun Jan 7 07:09:49 UTC 2024 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Sun Jan 7 07:10:56 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Feb 8 01:32:51 -12 2025 I: pbuilder-time-stamp: 1739021571 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cif-tools_1.0.0-3.dsc] I: copying [./cif-tools_1.0.0.orig.tar.gz] I: copying [./cif-tools_1.0.0-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.8omalb9o/trustedkeys.kbx': General error gpgv: Signature made Tue Dec 1 07:55:15 2020 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./cif-tools_1.0.0-3.dsc dpkg-source: info: extracting cif-tools in cif-tools-1.0.0 dpkg-source: info: unpacking cif-tools_1.0.0.orig.tar.gz dpkg-source: info: unpacking cif-tools_1.0.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying makefile dpkg-source: info: applying spelling-errors dpkg-source: info: applying configure-patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3988294/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=12 ' DISTRIBUTION='bullseye' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='a7647460ddb74a40a3590b146fbc3058' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3988294' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.2Zgx435A/pbuilderrc_hyTm --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.2Zgx435A/b1 --logfile b1/build.log cif-tools_1.0.0-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.104:3128' I: uname -a Linux codethink03-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Mar 27 2022 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 7 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 7 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 64856 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 182496 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 93744 Apr 10 2022 gzip -rwxr-xr-x 1 root root 18440 Nov 7 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 157864 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Jan 20 2022 more -rwsr-xr-x 1 root root 51360 Jan 20 2022 mount -rwxr-xr-x 1 root root 14496 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 7 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jan 8 15:47 sh -> dash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Jan 20 2022 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 17 2021 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30880 Jan 20 2022 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 7 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/3988294/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: autoconf-archive, debhelper-compat (= 13), libboost-date-time-dev, libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-system-dev, libcifpp-dev, pkg-config dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 17734 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on autoconf-archive; however: Package autoconf-archive is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-date-time-dev; however: Package libboost-date-time-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-system-dev; however: Package libboost-system-dev is not installed. pbuilder-satisfydepends-dummy depends on libcifpp-dev; however: Package libcifpp-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} autoconf-archive{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libboost-date-time-dev{a} libboost-date-time1.74-dev{a} libboost-date-time1.74.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-serialization1.74-dev{a} libboost-serialization1.74.0{a} libboost-system-dev{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost1.74-dev{a} libcifpp-dev{a} libcifpp1{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libicu-dev{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} pkg-config{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 55 newly installed, 0 to remove and 0 not upgraded. Need to get 44.4 MB of archives. After unpacking 300 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-8+deb11u1 [142 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 autoconf-archive all 20190106-2.1 [746 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3+deb11u1 [273 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3+deb11u1 [123 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3+deb11u1 [69.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7+deb11u4 [629 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 icu-devtools arm64 67.1-7 [189 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 libboost1.74-dev arm64 1.74.0-9 [9534 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 libboost-date-time1.74.0 arm64 1.74.0-9 [241 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libboost-serialization1.74.0 arm64 1.74.0-9 [331 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 libboost-serialization1.74-dev arm64 1.74.0-9 [381 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 libboost-date-time1.74-dev arm64 1.74.0-9 [250 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libboost-date-time-dev arm64 1.74.0.3 [4332 B] Get: 40 http://deb.debian.org/debian bullseye/main arm64 libboost-dev arm64 1.74.0.3 [4548 B] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libboost-regex1.74.0 arm64 1.74.0-9 [473 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libicu-dev arm64 67.1-7 [9468 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libboost-regex1.74-dev arm64 1.74.0-9 [549 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 libboost-iostreams1.74-dev arm64 1.74.0-9 [272 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libboost-iostreams-dev arm64 1.74.0.3 [4316 B] Get: 46 http://deb.debian.org/debian bullseye/main arm64 libboost-program-options1.74.0 arm64 1.74.0-9 [344 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 libboost-program-options1.74-dev arm64 1.74.0-9 [382 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 libboost-program-options-dev arm64 1.74.0.3 [4340 B] Get: 49 http://deb.debian.org/debian bullseye/main arm64 libboost-system1.74.0 arm64 1.74.0-9 [242 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 libboost-system1.74-dev arm64 1.74.0-9 [243 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libboost-system-dev arm64 1.74.0.3 [4468 B] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libcifpp1 arm64 1.0.1-3 [1352 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libcifpp-dev arm64 1.0.1-3 [65.1 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 libglib2.0-0 arm64 2.66.8-1 [1286 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 pkg-config arm64 0.29.2-1 [63.6 kB] Fetched 44.4 MB in 1s (76.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17734 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8+deb11u1_arm64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../01-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../03-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package autoconf-archive. Preparing to unpack .../05-autoconf-archive_20190106-2.1_all.deb ... Unpacking autoconf-archive (20190106-2.1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../08-libmagic1_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../11-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../17-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../18-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../19-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../20-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../21-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../23-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../24-libelf1_0.183-1_arm64.deb ... Unpacking libelf1:arm64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../25-dwz_0.13+20210201-1_arm64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:arm64. Preparing to unpack .../26-libicu67_67.1-7_arm64.deb ... Unpacking libicu67:arm64 (67.1-7) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../27-libxml2_2.9.10+dfsg-6.7+deb11u4_arm64.deb ... Unpacking libxml2:arm64 (2.9.10+dfsg-6.7+deb11u4) ... Selecting previously unselected package gettext. Preparing to unpack .../28-gettext_0.21-4_arm64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../29-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../30-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../32-icu-devtools_67.1-7_arm64.deb ... Unpacking icu-devtools (67.1-7) ... Selecting previously unselected package libboost1.74-dev:arm64. Preparing to unpack .../33-libboost1.74-dev_1.74.0-9_arm64.deb ... Unpacking libboost1.74-dev:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-date-time1.74.0:arm64. Preparing to unpack .../34-libboost-date-time1.74.0_1.74.0-9_arm64.deb ... Unpacking libboost-date-time1.74.0:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-serialization1.74.0:arm64. Preparing to unpack .../35-libboost-serialization1.74.0_1.74.0-9_arm64.deb ... Unpacking libboost-serialization1.74.0:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-serialization1.74-dev:arm64. Preparing to unpack .../36-libboost-serialization1.74-dev_1.74.0-9_arm64.deb ... Unpacking libboost-serialization1.74-dev:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-date-time1.74-dev:arm64. Preparing to unpack .../37-libboost-date-time1.74-dev_1.74.0-9_arm64.deb ... Unpacking libboost-date-time1.74-dev:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-date-time-dev:arm64. Preparing to unpack .../38-libboost-date-time-dev_1.74.0.3_arm64.deb ... Unpacking libboost-date-time-dev:arm64 (1.74.0.3) ... Selecting previously unselected package libboost-dev:arm64. Preparing to unpack .../39-libboost-dev_1.74.0.3_arm64.deb ... Unpacking libboost-dev:arm64 (1.74.0.3) ... Selecting previously unselected package libboost-regex1.74.0:arm64. Preparing to unpack .../40-libboost-regex1.74.0_1.74.0-9_arm64.deb ... Unpacking libboost-regex1.74.0:arm64 (1.74.0-9) ... Selecting previously unselected package libicu-dev:arm64. Preparing to unpack .../41-libicu-dev_67.1-7_arm64.deb ... Unpacking libicu-dev:arm64 (67.1-7) ... Selecting previously unselected package libboost-regex1.74-dev:arm64. Preparing to unpack .../42-libboost-regex1.74-dev_1.74.0-9_arm64.deb ... Unpacking libboost-regex1.74-dev:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-iostreams1.74-dev:arm64. Preparing to unpack .../43-libboost-iostreams1.74-dev_1.74.0-9_arm64.deb ... Unpacking libboost-iostreams1.74-dev:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-iostreams-dev:arm64. Preparing to unpack .../44-libboost-iostreams-dev_1.74.0.3_arm64.deb ... Unpacking libboost-iostreams-dev:arm64 (1.74.0.3) ... Selecting previously unselected package libboost-program-options1.74.0:arm64. Preparing to unpack .../45-libboost-program-options1.74.0_1.74.0-9_arm64.deb ... Unpacking libboost-program-options1.74.0:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-program-options1.74-dev:arm64. Preparing to unpack .../46-libboost-program-options1.74-dev_1.74.0-9_arm64.deb ... Unpacking libboost-program-options1.74-dev:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-program-options-dev:arm64. Preparing to unpack .../47-libboost-program-options-dev_1.74.0.3_arm64.deb ... Unpacking libboost-program-options-dev:arm64 (1.74.0.3) ... Selecting previously unselected package libboost-system1.74.0:arm64. Preparing to unpack .../48-libboost-system1.74.0_1.74.0-9_arm64.deb ... Unpacking libboost-system1.74.0:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-system1.74-dev:arm64. Preparing to unpack .../49-libboost-system1.74-dev_1.74.0-9_arm64.deb ... Unpacking libboost-system1.74-dev:arm64 (1.74.0-9) ... Selecting previously unselected package libboost-system-dev:arm64. Preparing to unpack .../50-libboost-system-dev_1.74.0.3_arm64.deb ... Unpacking libboost-system-dev:arm64 (1.74.0.3) ... Selecting previously unselected package libcifpp1. Preparing to unpack .../51-libcifpp1_1.0.1-3_arm64.deb ... Unpacking libcifpp1 (1.0.1-3) ... Selecting previously unselected package libcifpp-dev. Preparing to unpack .../52-libcifpp-dev_1.0.1-3_arm64.deb ... Unpacking libcifpp-dev (1.0.1-3) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../53-libglib2.0-0_2.66.8-1_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.66.8-1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../54-pkg-config_0.29.2-1_arm64.deb ... Unpacking pkg-config (0.29.2-1) ... Setting up libpipeline1:arm64 (1.5.3-1) ... Setting up libboost-system1.74.0:arm64 (1.74.0-9) ... Setting up libboost1.74-dev:arm64 (1.74.0-9) ... Setting up bsdextrautils (2.36.1-8+deb11u1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3+deb11u1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:arm64 (2.66.8-1) ... No schema files found: doing nothing. Setting up libboost-program-options1.74.0:arm64 (1.74.0-9) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:arm64 (1:5.39-3+deb11u1) ... Setting up gettext-base (0.21-4) ... Setting up autoconf-archive (20190106-2.1) ... Setting up file (1:5.39-3+deb11u1) ... Setting up libboost-program-options1.74-dev:arm64 (1.74.0-9) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libboost-program-options-dev:arm64 (1.74.0.3) ... Setting up libboost-system1.74-dev:arm64 (1.74.0-9) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up libboost-regex1.74.0:arm64 (1.74.0-9) ... Setting up autopoint (0.21-4) ... Setting up icu-devtools (67.1-7) ... Setting up pkg-config (0.29.2-1) ... Setting up libboost-serialization1.74.0:arm64 (1.74.0-9) ... Setting up libcifpp1 (1.0.1-3) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libboost-dev:arm64 (1.74.0.3) ... Setting up libboost-date-time1.74.0:arm64 (1.74.0-9) ... Setting up libelf1:arm64 (0.183-1) ... Setting up libicu-dev:arm64 (67.1-7) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7+deb11u4) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libboost-system-dev:arm64 (1.74.0.3) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up libboost-serialization1.74-dev:arm64 (1.74.0-9) ... Setting up libcifpp-dev (1.0.1-3) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up libboost-regex1.74-dev:arm64 (1.74.0-9) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libboost-iostreams1.74-dev:arm64 (1.74.0-9) ... Setting up dh-autoreconf (20) ... Setting up libboost-date-time1.74-dev:arm64 (1.74.0-9) ... Setting up libboost-date-time-dev:arm64 (1.74.0.3) ... Setting up debhelper (13.3.4) ... Setting up libboost-iostreams-dev:arm64 (1.74.0.3) ... Processing triggers for libc-bin (2.31-13+deb11u6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/cif-tools-1.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cif-tools_1.0.0-3_source.changes dpkg-buildpackage: info: source package cif-tools dpkg-buildpackage: info: source version 1.0.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maarten L. Hekkelman dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf aclocal: warning: couldn't open directory 'config/m4': No such file or directory debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/cif-tools-1.0.0' dh_auto_configure -- --disable-resources --disable-revision ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --disable-resources --disable-revision checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking whether g++ supports C++17 features with -std=c++17... yes checking whether C++ compiler accepts -fstandalone-debug... no checking for a BSD-compatible install... /usr/bin/install -c checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for a sed that does not truncate output... /bin/sed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking whether gcc is Clang... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for mrc... no configure: WARNING: The mrc application was not found, not using resources. checking how to run the C++ preprocessor... g++ -std=c++17 -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking filesystem usability... yes checking filesystem presence... yes checking for filesystem... yes checking for boostlib >= 1.65.1 (106501)... yes checking whether the Boost::IOStreams library is available... yes checking for exit in -lboost_iostreams... yes checking whether the Boost::Program_Options library is available... yes checking for exit in -lboost_program_options... yes checking whether the Boost::Date_Time library is available... yes checking for exit in -lboost_date_time... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for pkg-config... /usr/bin/pkg-config checking for libcifpp ... yes configure: creating ./config.status config.status: creating GNUmakefile config.status: creating src/config.hpp make[1]: Leaving directory '/build/reproducible-path/cif-tools-1.0.0' dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/cif-tools-1.0.0' mkdir -p obj >> src/pdb2cif.cpp >> src/cif2pdb.cpp >> src/cif-diff.cpp >> src/cif-drop.cpp >> src/cif-grep.cpp >> src/cif-merge.cpp >> src/cif-validate.cpp >> src/mmCQL.cpp >> src/pr-main.cpp -> cif-diff -> cif2pdb -> cif-drop -> cif-merge -> cif-validate -> mmCQL -> cif-grep -> pdb2cif make[1]: Leaving directory '/build/reproducible-path/cif-tools-1.0.0' dh_auto_test make -j12 test VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/cif-tools-1.0.0' cif-diff.o cif-drop.o cif-grep.o cif-merge.o cif-validate.o cif2pdb.o mmCQL.o pdb2cif.o pr-main.o make[1]: Leaving directory '/build/reproducible-path/cif-tools-1.0.0' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j12 install DESTDIR=/build/reproducible-path/cif-tools-1.0.0/debian/cif-tools AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/cif-tools-1.0.0' install -d /build/reproducible-path/cif-tools-1.0.0/debian/cif-tools/usr/bin for p in pdb2cif cif2pdb cif-diff cif-drop cif-grep cif-merge cif-validate mmCQL; do install $p /build/reproducible-path/cif-tools-1.0.0/debian/cif-tools/usr/bin/$p; done install -d /build/reproducible-path/cif-tools-1.0.0/debian/cif-tools/usr/share/man/man1 for p in pdb2cif cif2pdb cif-diff cif-drop cif-grep cif-merge cif-validate mmCQL; do \ install -m 644 doc/${p}.1 /build/reproducible-path/cif-tools-1.0.0/debian/cif-tools/usr/share/man/man1/${p}.1; \ gzip /build/reproducible-path/cif-tools-1.0.0/debian/cif-tools/usr/share/man/man1/${p}.1; \ done make[1]: Leaving directory '/build/reproducible-path/cif-tools-1.0.0' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'cif-tools' in '../cif-tools_1.0.0-3_arm64.deb'. dpkg-deb: building package 'cif-tools-dbgsym' in '../cif-tools-dbgsym_1.0.0-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../cif-tools_1.0.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3988294 and its subdirectories I: Current time: Sat Feb 8 01:33:54 -12 2025 I: pbuilder-time-stamp: 1739021634 Sun Jan 7 07:10:57 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink02-arm64.debian.net. Sun Jan 7 07:10:57 UTC 2024 I: Preparing to do remote build '2' on codethink02-arm64.debian.net. Sun Jan 7 07:12:09 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. Sun Jan 7 07:12:09 UTC 2024 I: cif-tools_1.0.0-3_arm64.changes: Format: 1.8 Date: Mon, 30 Nov 2020 17:34:22 +0100 Source: cif-tools Binary: cif-tools cif-tools-dbgsym Architecture: arm64 Version: 1.0.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Maarten L. Hekkelman Description: cif-tools - Suite of tools to manipulate, validate and query mmCIF files Changes: cif-tools (1.0.0-3) unstable; urgency=medium . * Fixed VCS url's in debian/control file Checksums-Sha1: 91fdc1e98a88cdb4c99bcab133448135520d5ffe 9212868 cif-tools-dbgsym_1.0.0-3_arm64.deb 8f09a498c9cf3aba0707f31c34f87de616d77078 6165 cif-tools_1.0.0-3_arm64.buildinfo 702c8ab2d10e20623495be75336dc2efdafbad93 344228 cif-tools_1.0.0-3_arm64.deb Checksums-Sha256: 856f033875b1a5d358b198bcd895ea513705a592c5cab3099b5c1281f3988a9d 9212868 cif-tools-dbgsym_1.0.0-3_arm64.deb c6c146cd85b9a91f5cdf3517d442b6b439ae16695ce2991f355910749015e0f7 6165 cif-tools_1.0.0-3_arm64.buildinfo 51234d5c036023bdef08b4fb9a97b0bde6465f091878798e7fdbefd8027b5a3b 344228 cif-tools_1.0.0-3_arm64.deb Files: f5a59b0dfad5b4313eb94a31748490dc 9212868 debug optional cif-tools-dbgsym_1.0.0-3_arm64.deb 1e339b7e71cab339c585ebc28475d271 6165 science optional cif-tools_1.0.0-3_arm64.buildinfo 724ea9d96e7b048758b61720fa17c809 344228 science optional cif-tools_1.0.0-3_arm64.deb Sun Jan 7 07:12:10 UTC 2024 I: diffoscope 240 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.2Zgx435A/cif-tools_1.0.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.2Zgx435A/cif-tools_1.0.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.2Zgx435A/cif-tools_1.0.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.2Zgx435A/b1/cif-tools_1.0.0-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.2Zgx435A/b2/cif-tools_1.0.0-3_arm64.changes ## close_archive (total time: 0.001s) 0.001s 32 calls diffoscope.comparators.xz.XzContainer 0.000s 20 calls diffoscope.comparators.deb.DebTarContainer 0.000s 8 calls diffoscope.comparators.deb.DebContainer 0.000s 12 calls diffoscope.comparators.tar.TarContainer ## command (total time: 650.371s) 329.224s 8224 calls readelf 248.360s 890 calls diff 49.048s 1408 calls objdump 11.953s 16 calls objcopy 10.797s 32 calls xz 0.986s 176 calls strings 0.003s 31 calls cmp (internal) ## compare_files (cumulative) (total time: 1710.083s) 328.925s 1 call abc.DotChangesFile 328.902s 2 calls abc.DebFile 328.798s 4 calls abc.XzFile 327.462s 2 calls abc.DebDataTarFile 326.475s 16 calls abc.ElfFile 61.751s 64 calls diffoscope.comparators.elf.ElfCodeSection 7.184s 296 calls diffoscope.comparators.elf.ElfSection 0.370s 16 calls diffoscope.comparators.elf.ElfStringSection 0.116s 8 calls diffoscope.comparators.elf.MonkeyPatchedElfSection 0.071s 2 calls abc.TarFile 0.017s 1 call abc.TextFile 0.012s 2 calls abc.Md5sumsFile ## container_extract (total time: 11.556s) 10.798s 32 calls diffoscope.comparators.xz.XzContainer 0.649s 76 calls diffoscope.comparators.deb.DebTarContainer 0.099s 36 calls diffoscope.comparators.deb.DebContainer 0.010s 16 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.703s) 0.703s 69 calls linediff ## has_same_content_as (total time: 0.008s) 0.003s 16 calls abc.ElfFile 0.002s 296 calls diffoscope.comparators.elf.ElfSection 0.001s 64 calls diffoscope.comparators.elf.ElfCodeSection 0.000s 4 calls abc.TextFile 0.000s 4 calls abc.Md5sumsFile 0.000s 2 calls abc.DebDataTarFile 0.000s 4 calls abc.XzFile 0.000s 2 calls abc.TarFile 0.000s 2 calls abc.DebFile 0.000s 16 calls diffoscope.comparators.elf.ElfStringSection 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 1 call abc.DotChangesFile 0.000s 8 calls diffoscope.comparators.elf.MonkeyPatchedElfSection ## main (total time: 330.710s) 330.709s 2 calls outputs 0.001s 1 call cleanup ## open_archive (total time: 0.001s) 0.000s 32 calls diffoscope.comparators.xz.XzContainer 0.000s 20 calls diffoscope.comparators.deb.DebTarContainer 0.000s 12 calls diffoscope.comparators.tar.TarContainer 0.000s 8 calls diffoscope.comparators.deb.DebContainer ## output (total time: 1.434s) 1.429s 1 call html 0.003s 1 call text 0.002s 1 call json ## recognizes (total time: 12.119s) 9.731s 908 calls diffoscope.comparators.utils.archive.ArchiveMember 1.045s 6512 calls diffoscope.comparators.elf.ElfSection 0.935s 3720 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.203s 1408 calls diffoscope.comparators.elf.ElfCodeSection 0.093s 12 calls diffoscope.comparators.binary.FilesystemFile 0.071s 352 calls diffoscope.comparators.elf.ElfStringSection 0.031s 216 calls diffoscope.comparators.debian.DebControlMember 0.010s 176 calls diffoscope.comparators.elf.MonkeyPatchedElfSection 0.000s 32 calls abc.Md5sumsFile 0.000s 10 calls abc.DotChangesFile 0.000s 4 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink ## specialize (total time: 1.583s) 1.583s 420 calls specialize Sun Jan 7 07:17:41 UTC 2024 E: cif-tools failed to build reproducibly in bullseye on arm64. Sun Jan 7 07:17:41 UTC 2024 E: diffoscope 240 found issues, please check https://tests.reproducible-builds.org/debian/dbd/bullseye/arm64/cif-tools_1.0.0-3.diffoscope.html Sun Jan 7 07:17:44 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Jan 7 07:17:44 UTC 2024 I: Submitting 8.0K b1/cif-tools_1.0.0-3_arm64.buildinfo.asc Sun Jan 7 07:17:45 UTC 2024 I: Submitting 8.0K b2/cif-tools_1.0.0-3_arm64.buildinfo.asc Sun Jan 7 07:17:46 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Jan 7 07:17:46 UTC 2024 I: Done submitting .buildinfo files. Sun Jan 7 07:17:46 UTC 2024 I: Removing signed cif-tools_1.0.0-3_arm64.buildinfo.asc files: removed './b1/cif-tools_1.0.0-3_arm64.buildinfo.asc' removed './b2/cif-tools_1.0.0-3_arm64.buildinfo.asc'