Thu Aug 19 05:17:08 UTC 2021 I: starting to build transtermhp/bullseye/armhf on jenkins on '2021-08-19 05:16' Thu Aug 19 05:17:08 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_30/10920/console.log Thu Aug 19 05:17:08 UTC 2021 I: Downloading source for bullseye/transtermhp=2.09-5 --2021-08-19 05:17:09-- http://cdn-fastly.deb.debian.org/debian/pool/main/t/transtermhp/transtermhp_2.09-5.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2099 (2.0K) Saving to: ‘transtermhp_2.09-5.dsc’ 0K .. 100% 184M=0s 2021-08-19 05:17:09 (184 MB/s) - ‘transtermhp_2.09-5.dsc’ saved [2099/2099] Thu Aug 19 05:17:09 UTC 2021 I: transtermhp_2.09-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: transtermhp Binary: transtermhp Architecture: any Version: 2.09-5 Maintainer: Debian Med Packaging Team Uploaders: Alexandre Mestiashvili , Andreas Tille , Fabian Klötzl Homepage: https://transterm.cbcb.umd.edu/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/transtermhp Vcs-Git: https://salsa.debian.org/med-team/transtermhp.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: debhelper-compat (= 13) Package-List: transtermhp deb science optional arch=any Checksums-Sha1: 13407d7c9f1b7761a3f1cf1272fc38ef41a3a1ec 71293 transtermhp_2.09.orig.tar.gz 30df452f764bf3df407d867e9c106245c6d0ab08 15884 transtermhp_2.09-5.debian.tar.xz Checksums-Sha256: f2e2bb29ca17d26da4693bb8c5291a1dd9204944ce267a7ae241cd5d6cea41cc 71293 transtermhp_2.09.orig.tar.gz 9d88c0d3f14e0a948011481acca05cfdadc9b4805e99b719d91b39aca00b5714 15884 transtermhp_2.09-5.debian.tar.xz Files: 71aa38ce36252cb455f3021eacefd5d0 71293 transtermhp_2.09.orig.tar.gz b2efa8b6a293ab7c293ed6c97b5fef9a 15884 transtermhp_2.09-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl8+kXkUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafHHRQ/+M/LGANPSZkOqwyuPu4oNH3gszddy uI7c1MulyMpaZRn1uZctGE108B4bFyyO3GI4L04wgWYe4Nwpsr4Sa7sAo4YjNJeX ++pTwjG6o+VPz6At8Q70dzO9v1uHlg5PV/zppeWYgp2U5XN9T+GSdRHFMQL1CRGd mPIgJzlzu1omAX4JJ/mraXNbi6l7Tl63nwG5NDYrOD8hUfWadQRu9jAIO/9D4WGa 8ZandVnkmzROxNNCNNZCfj6xGvGcmRok+xsCx8szL+ooJqVpotTMxiAItJqA3PsY tIKYMueP7YO/SLIhvBFvb8GBGZvlJze5v+bQpdZOJvPnZpymV1t6gMvQX9aBu7Q1 5S2uDTbvFwiGNTX27cpkZzvX9KAFtCm+1sm/9670dBY5Cn8Iw/IBCWAhGLWCT/jI i13Lr5P746UcD0suGM2cIqx1lbAqzZCS2zZCv6bjBUUTSxtD4KwrItkh9B1F/NBh F5R9S4a+Jqv1kLCMesxrFvRA6VGaVM3J7phaymwqzAtyeCFyq9qZWJKi34/doxTV k4CBRXKE71MPi3A8BXfmdfEkJnth79hdU340Gj/RT9ToCun1LdTPOn9Ue3VfXnxp 2B2RKdKxDXJxr+PhVXyFdcD+p0YJ30Cfr50RpWahh6/VkHz08CNQjjysX+Cqjrbb gG3cJ8vJyVwIjw8= =hPM5 -----END PGP SIGNATURE----- Thu Aug 19 05:17:09 UTC 2021 I: Checking whether the package is not for us Thu Aug 19 05:17:09 UTC 2021 I: Starting 1st build on remote node ff64a-armhf-rb.debian.net. Thu Aug 19 05:17:09 UTC 2021 I: Preparing to do remote build '1' on ff64a-armhf-rb.debian.net. Thu Aug 19 05:22:06 UTC 2021 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Aug 18 17:17:17 -12 2021 I: pbuilder-time-stamp: 1629350237 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [transtermhp_2.09-5.dsc] I: copying [./transtermhp_2.09.orig.tar.gz] I: copying [./transtermhp_2.09-5.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.PnFNWblY/trustedkeys.kbx': General error gpgv: Signature made Thu Aug 20 03:06:33 2020 -12 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./transtermhp_2.09-5.dsc dpkg-source: info: extracting transtermhp in transtermhp-2.09 dpkg-source: info: unpacking transtermhp_2.09.orig.tar.gz dpkg-source: info: unpacking transtermhp_2.09-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying 0002-read_seq-return-NULL-instead-of-false.patch dpkg-source: info: applying 0003-Don-t-overwrite-CXXFLAGS.patch dpkg-source: info: applying 2to3.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/18196/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=5' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='9978d484aee14f8bbfa87ab121151576' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='18196' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.iePzXpgPjC/pbuilderrc_o6fn --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.iePzXpgPjC/b1 --logfile b1/build.log transtermhp_2.09-5.dsc' SUDO_GID='114' SUDO_UID='109' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux ff64a 5.10.0-8-arm64 #1 SMP Debian 5.10.46-4 (2021-08-03) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Aug 4 08:25 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Jul 28 07:09 more -rwsr-xr-x 1 root root 34400 Jul 28 07:09 mount -rwxr-xr-x 1 root root 9824 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 15 21:26 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Jul 28 07:09 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 2021 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Jul 28 07:09 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/18196/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 17.7 MB of archives. After unpacking 62.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-8 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Fetched 17.7 MB in 3s (6758 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8_armhf.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../07-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_armhf.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_armhf.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../10-libsigsegv2_2.13-1_armhf.deb ... Unpacking libsigsegv2:armhf (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_armhf.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../23-libelf1_0.183-1_armhf.deb ... Unpacking libelf1:armhf (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.13+20210201-1_armhf.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:armhf. Preparing to unpack .../25-libicu67_67.1-7_armhf.deb ... Unpacking libicu67:armhf (67.1-7) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../26-libxml2_2.9.10+dfsg-6.7_armhf.deb ... Unpacking libxml2:armhf (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-4_armhf.deb ... Unpacking gettext (0.21-4) ... 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Setting up libsigsegv2:armhf (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:armhf (0.183-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/transtermhp-2.09/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../transtermhp_2.09-5_source.changes dpkg-buildpackage: info: source package transtermhp dpkg-buildpackage: info: source version 2.09-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j5 clean make[1]: Entering directory '/build/transtermhp-2.09' rm -f *.o rm -f transterm 2ndscore core.* make[1]: Leaving directory '/build/transtermhp-2.09' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j5 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/transtermhp-2.09' g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seq.o seq.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o distr.o distr.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o util.o util.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o map-output.o map-output.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gene-reader.o gene-reader.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o search.o search.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o conf.o conf.cc search.cc: In function 'void find_terms_dp(Seq&, Direction)': search.cc:704:9: warning: variable 'tailoffset' set but not used [-Wunused-but-set-variable] 704 | int tailoffset = 0; | ^~~~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ermolaeva-score.o ermolaeva-score.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ermolaeva-oldconf.o ermolaeva-oldconf.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o analysis.o analysis.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o anti.o anti.cc g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transterm.o transterm.cc transterm.cc:254:47: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 254 | cout << "TransTermHP v2.08 (built on " << __DATE__ << ")" << endl; | ^~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o 2ndscore.o 2ndscore.cc 2ndscore.cc:224:29: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 224 | cerr << "2ndscore (" << __DATE__ << ")" << endl; | ^~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -o transterm seq.o distr.o util.o map-output.o gene-reader.o search.o conf.o ermolaeva-score.o ermolaeva-oldconf.o analysis.o anti.o transterm.o -Wl,-z,relro -Wl,-z,now g++ -g -O2 -fdebug-prefix-map=/build/transtermhp-2.09=. -fstack-protector-strong -Wformat -Werror=format-security -g -O3 -Wall -pedantic -o 2ndscore seq.o search.o ermolaeva-score.o util.o 2ndscore.o -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/build/transtermhp-2.09' debian/rules override_dh_auto_test make[1]: Entering directory '/build/transtermhp-2.09' echo "Testing is not possible since upstream source is lacking needed input files." Testing is not possible since upstream source is lacking needed input files. make[1]: Leaving directory '/build/transtermhp-2.09' create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/transtermhp-2.09' dh_installchangelogs RELEASE-NOTES.txt make[1]: Leaving directory '/build/transtermhp-2.09' dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/transtermhp/usr/bin/transterm contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/transtermhp/usr/bin/2ndscore contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'transtermhp' in '../transtermhp_2.09-5_armhf.deb'. dpkg-deb: building package 'transtermhp-dbgsym' in '../transtermhp-dbgsym_2.09-5_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../transtermhp_2.09-5_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/18196 and its subdirectories I: Current time: Wed Aug 18 17:21:59 -12 2021 I: pbuilder-time-stamp: 1629350519 Thu Aug 19 05:22:08 UTC 2021 I: 1st build successful. Starting 2nd build on remote node virt32c-armhf-rb.debian.net. Thu Aug 19 05:22:08 UTC 2021 I: Preparing to do remote build '2' on virt32c-armhf-rb.debian.net. Thu Aug 19 05:23:33 UTC 2021 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. Thu Aug 19 05:23:35 UTC 2021 I: transtermhp_2.09-5_armhf.changes: Format: 1.8 Date: Thu, 20 Aug 2020 17:56:55 +0530 Source: transtermhp Binary: transtermhp transtermhp-dbgsym Architecture: armhf Version: 2.09-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: transtermhp - find rho-independent transcription terminators in bacterial genom Changes: transtermhp (2.09-5) unstable; urgency=medium . * Team Upload. [ Steffen Moeller ] * d/u/metadata: yamllint * Update metadata with ref to conda . [ Nilesh Patra ] * Add python3 support * Add autopkgtests * Install relevant examples * Add patch description * Fix with cme * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Use secure URI in Homepage field. * Set field Upstream-Contact in debian/copyright. * Remove obsolete field Contact from debian/upstream/metadata (already present in machine-readable debian/copyright). Checksums-Sha1: 39a2951b3c561934f201975b4c96a2a289ac9505 1523004 transtermhp-dbgsym_2.09-5_armhf.deb 9645c07183ae96bb8e35e25fcb389f329ac467d1 4778 transtermhp_2.09-5_armhf.buildinfo a3365627e61068891761da3d934715af95f794fd 114416 transtermhp_2.09-5_armhf.deb Checksums-Sha256: 492c0e97e76e6a4d7a6636f921c4c8828ae3423c4faab2a1d9a1528ca498e486 1523004 transtermhp-dbgsym_2.09-5_armhf.deb d3f1935398cb05dd9fa60190fa37710f827a7238fc062c61a68943a30b2343f0 4778 transtermhp_2.09-5_armhf.buildinfo dd672315e01be6986e01ac2c29e03e197ef0474fc1e26bb51fc413b503ad6bcd 114416 transtermhp_2.09-5_armhf.deb Files: 96a1956c0da0bd445726ade1c655c02b 1523004 debug optional transtermhp-dbgsym_2.09-5_armhf.deb 7b4022031c07ba87600069e9545663aa 4778 science optional transtermhp_2.09-5_armhf.buildinfo 421002b78a3613148df6d3693e6c6093 114416 science optional transtermhp_2.09-5_armhf.deb Thu Aug 19 05:23:36 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.iePzXpgPjC/transtermhp_2.09-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.iePzXpgPjC/transtermhp_2.09-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.iePzXpgPjC/transtermhp_2.09-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.iePzXpgPjC/b1/transtermhp_2.09-5_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.iePzXpgPjC/b2/transtermhp_2.09-5_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.277s) 0.277s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.030s) 0.030s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu Aug 19 05:23:37 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Thu Aug 19 05:23:37 UTC 2021 I: transtermhp from bullseye built successfully and reproducibly on armhf. Thu Aug 19 05:23:39 UTC 2021 I: Submitting .buildinfo files to external archives: Thu Aug 19 05:23:39 UTC 2021 I: Submitting 8.0K b1/transtermhp_2.09-5_armhf.buildinfo.asc Thu Aug 19 05:23:40 UTC 2021 I: Submitting 8.0K b2/transtermhp_2.09-5_armhf.buildinfo.asc Thu Aug 19 05:23:40 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Aug 19 05:23:40 UTC 2021 I: Done submitting .buildinfo files. Thu Aug 19 05:23:40 UTC 2021 I: Removing signed transtermhp_2.09-5_armhf.buildinfo.asc files: removed './b1/transtermhp_2.09-5_armhf.buildinfo.asc' removed './b2/transtermhp_2.09-5_armhf.buildinfo.asc'