Fri Mar 29 11:55:04 UTC 2024 I: starting to build khmer/experimental/i386 on jenkins on '2024-03-29 11:54' Fri Mar 29 11:55:04 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_4/12955/console.log Fri Mar 29 11:55:04 UTC 2024 I: Downloading source for experimental/khmer=3.0.0~a3+dfsg-9~0exp --2024-03-29 11:55:04-- http://cdn-fastly.deb.debian.org/debian/pool/main/k/khmer/khmer_3.0.0%7ea3%2bdfsg-9%7e0exp.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2577 (2.5K) [text/prs.lines.tag] Saving to: ‘khmer_3.0.0~a3+dfsg-9~0exp.dsc’ 0K .. 100% 241M=0s 2024-03-29 11:55:04 (241 MB/s) - ‘khmer_3.0.0~a3+dfsg-9~0exp.dsc’ saved [2577/2577] Fri Mar 29 11:55:04 UTC 2024 I: khmer_3.0.0~a3+dfsg-9~0exp.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: khmer Binary: khmer-common, khmer, liboxli1, liboxli-dev Architecture: any all Version: 3.0.0~a3+dfsg-9~0exp Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Kevin Murray Homepage: https://khmer.readthedocs.org Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/khmer Vcs-Git: https://salsa.debian.org/med-team/khmer.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, libbz2-dev, pkg-config, python3-pytest, python3-pytest-runner, zlib1g-dev Build-Depends: debhelper-compat (= 13), dh-sequence-python3, dh-exec, python3-guzzle-sphinx-theme, python3, python3-dev, python3-all-dev, python3-setuptools, python3-screed, python3-pytest, python3-pytest-runner, python3-sphinx, python3-sphinxcontrib.autoprogram, cython3, zlib1g-dev, libbz2-dev, asciidoctor, rdfind Package-List: khmer deb science optional arch=any khmer-common deb science optional arch=all liboxli-dev deb libdevel optional arch=any liboxli1 deb libs optional arch=any Checksums-Sha1: 1a51494aad337d08da8533335a797ea62524d55c 15748048 khmer_3.0.0~a3+dfsg.orig.tar.xz 8d759e9bfe68e382caef6b6e452c697c5d091839 28900 khmer_3.0.0~a3+dfsg-9~0exp.debian.tar.xz Checksums-Sha256: c21d652ac412e641f568cdc300952d53620bb4902a9179c8267ea0030b799f75 15748048 khmer_3.0.0~a3+dfsg.orig.tar.xz 0ec65e6862cb5b84809e98d003d6777c22ab5ddf24ea5983248bee3a20eff02f 28900 khmer_3.0.0~a3+dfsg-9~0exp.debian.tar.xz Files: c89deeba6e3681cdf0218079abb9ebac 15748048 khmer_3.0.0~a3+dfsg.orig.tar.xz 3e4e52ab77aa79fa68d5165a194e0666 28900 khmer_3.0.0~a3+dfsg-9~0exp.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmXR6XcACgkQPCZ2P2xn 5uKrQA/+K03jZt1ZkKJHr83IhVZ1F4f358ZyTsgKTBBcrta0ih0OjX6YkEi3SvNd vXgRsK3H+cESw6lpymC7Ln370suvYnJgTaZfz1TIzypS6WC9TbZ72J9+IB9ToV+S k7FaFgpcqqKXMjbgv+WwKtQMiUySt3d9w+/8wijzJrkAQqOnIlY5MI0F+Oh0AQJg MwRR6fzFsdErvNNu9wTxbO1NAmYQry1q3jUbSHDfgC92PIWrWM3D3p7RUCAuKrqD jIj3gRut9J/x3JqD3vSKM7BdDnY4lxfxrpsRyqbiAFvUF2iOqmSjR6AVrtmbHdMx o2TcZZ0CW6EW4NQThbgsrJFSXZu8QvW121fN0vIhbk8dHPcFpRjKjBhowfCNbk7C cRCazmw5iNe59QC0gCq8pfIc7N40WFmFugf0VXE4kECEg751tWFGUbK6DWsevZyz H+MPO8JzhAn4XJsXJECklVRp0ZXLg77IQJQtLi8UIZZGvEmURg3TxCdPnDHVIluF gFebcV7CLUtOKTUtKzHcS0925Ww7E50sgufYcftPBy8Ia6J+9hoThyKrmbgslirN kZAnT7a6bMxH896wKpwa95Wx7O0O9xbnrFDDTES9daUk6569TR2lLHs3DEgsqdqF 7xqIbuH1WlFs4fnYIQHi93ApWg2Pe6AOIe05BgTgHZQttesq908= =W3Ug -----END PGP SIGNATURE----- Fri Mar 29 11:55:04 UTC 2024 I: Checking whether the package is not for us Fri Mar 29 11:55:04 UTC 2024 I: Starting 1st build on remote node ionos16-i386.debian.net. Fri Mar 29 11:55:04 UTC 2024 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Fri Mar 29 11:56:02 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu May 1 06:18:05 -12 2025 I: pbuilder-time-stamp: 1746123485 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/experimental-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [khmer_3.0.0~a3+dfsg-9~0exp.dsc] I: copying [./khmer_3.0.0~a3+dfsg.orig.tar.xz] I: copying [./khmer_3.0.0~a3+dfsg-9~0exp.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Feb 18 11:26:47 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./khmer_3.0.0~a3+dfsg-9~0exp.dsc: no acceptable signature found dpkg-source: info: extracting khmer in khmer-3.0.0~a3+dfsg dpkg-source: info: unpacking khmer_3.0.0~a3+dfsg.orig.tar.xz dpkg-source: info: unpacking khmer_3.0.0~a3+dfsg-9~0exp.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying non-x86-compat.patch dpkg-source: info: applying nose2pytest dpkg-source: info: applying fix_non_x86_build dpkg-source: info: applying hardening dpkg-source: info: applying update-manifest dpkg-source: info: applying setup-py-py3 dpkg-source: info: applying local-libs dpkg-source: info: applying older-setuptools dpkg-source: info: applying disable_google_analytics dpkg-source: info: applying get_version dpkg-source: info: applying install-prefix dpkg-source: info: applying cpython-bug-empty-exceptions dpkg-source: info: applying amend-skip dpkg-source: info: applying python3 dpkg-source: info: applying fix_liboxli_test dpkg-source: info: applying gcc11.patch dpkg-source: info: applying bz2.patch dpkg-source: info: applying stringio-buffer.patch dpkg-source: info: applying refresh_cython dpkg-source: info: applying find_object_files_at_right_loc.patch dpkg-source: info: applying python3.12-support.patch dpkg-source: info: applying close-opened-files.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/126656/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='experimental' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='f71fc829e0d94027b9ca65e0cea9a238' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='126656' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.07VGauGm/pbuilderrc_VuP7 --distribution experimental --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.07VGauGm/b1 --logfile b1/build.log khmer_3.0.0~a3+dfsg-9~0exp.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos16-i386 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 29 13:56 /bin -> usr/bin I: user script /srv/workspace/pbuilder/126656/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, dh-exec, python3-guzzle-sphinx-theme, python3, python3-dev, python3-all-dev, python3-setuptools, python3-screed, python3-pytest, python3-pytest-runner, python3-sphinx, python3-sphinxcontrib.autoprogram, cython3, zlib1g-dev, libbz2-dev, asciidoctor, rdfind dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on python3-guzzle-sphinx-theme; however: Package python3-guzzle-sphinx-theme is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-screed; however: Package python3-screed is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-runner; however: Package python3-pytest-runner is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinxcontrib.autoprogram; however: Package python3-sphinxcontrib.autoprogram is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on asciidoctor; however: Package asciidoctor is not installed. pbuilder-satisfydepends-dummy depends on rdfind; however: Package rdfind is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: asciidoctor{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fonts-glyphicons-halflings{a} fonts-liberation{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libbz2-dev{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libicu72{a} libjs-bootstrap{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libmagic-mgc{a} libmagic1t64{a} libncurses6{a} libpipeline1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} libruby{a} libruby3.1t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} libyaml-0-2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-dev{a} python3-distutils{a} python3-docutils{a} python3-guzzle-sphinx-theme{a} python3-idna{a} python3-imagesize{a} python3-iniconfig{a} python3-jinja2{a} python3-lib2to3{a} python3-markupsafe{a} python3-minimal{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pygments{a} python3-pytest{a} python3-pytest-runner{a} python3-requests{a} python3-roman{a} python3-screed{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinxcontrib.autoprogram{a} python3-tz{a} python3-urllib3{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} rake{a} rdfind{a} readline-common{a} ruby{a} ruby-asciidoctor{a} ruby-net-telnet{a} ruby-rubygems{a} ruby-sdbm{a} ruby-webrick{a} ruby-xmlrpc{a} ruby3.1{a} rubygems-integration{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tzdata{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl fonts-lato fonts-liberation-sans-narrow javascript-common libarchive-cpio-perl libgpm2 libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils lynx python3-pil wget zip 0 packages upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 76.0 MB of archives. After unpacking 310 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libpython3.11-minimal i386 3.11.8-3+b2 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 python3.11-minimal i386 3.11.8-3+b2 [1917 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 tzdata all 2024a-1 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-4 [171 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libpython3.11-stdlib i386 3.11.8-3+b2 [1794 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 python3.11 i386 3.11.8-3+b2 [597 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.11.8-1 [9336 B] Get: 13 http://deb.debian.org/debian unstable/main i386 python3 i386 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libpython3.12-minimal i386 3.12.2-4+b2 [807 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 python3.12-minimal i386 3.12.2-4+b2 [2064 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 openssl i386 3.1.5-1.1 [1246 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20240203 [158 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3 [42.9 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-3+b1 [1195 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.39.3-11 [93.7 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.7-1+b2 [39.6 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 man-db i386 2.12.0-3+b1 [1414 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 rubygems-integration all 1.18 [6704 B] Get: 30 http://deb.debian.org/debian unstable/main i386 rake all 13.0.6-3 [83.9 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 ruby-net-telnet all 0.2.0-1 [13.1 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 ruby-webrick all 1.8.1-1 [51.4 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 ruby-xmlrpc all 0.3.2-2 [24.4 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 ruby-sdbm i386 1.0.0-5+b3 [16.7 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20230828-1 [97.5 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libncurses6 i386 6.4+20240113-1 [111 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libyaml-0-2 i386 0.2.5-1 [55.9 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libruby3.1t64 i386 3.1.2-8.3 [5454 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 ruby3.1 i386 3.1.2-8.3 [664 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libruby i386 1:3.1+nmu1 [4664 B] Get: 42 http://deb.debian.org/debian unstable/main i386 ruby-rubygems all 3.4.20-1 [309 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 ruby i386 1:3.1+nmu1 [5584 B] Get: 44 http://deb.debian.org/debian unstable/main i386 ruby-asciidoctor all 2.0.20-1 [212 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 asciidoctor all 2.0.20-1 [87.7 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 autoconf all 2.71-3 [332 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 autopoint all 0.21-14 [496 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 cython3 i386 3.0.8-1 [6323 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-7 [517 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 59 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.191-1 [194 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 debhelper all 13.15.3 [901 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 dh-exec i386 0.29 [25.9 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 python3-lib2to3 all 3.12.2-3 [77.6 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 python3-distutils all 3.12.2-3 [131 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 python3-setuptools all 68.1.2-2 [468 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20240310 [106 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 docutils-common all 0.20.1+dfsg-3 [128 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 fonts-liberation all 1:2.1.5-3 [1475 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.6.2-1 [165 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 7.2.6-6 [150 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libpython3.11t64 i386 3.11.8-3+b2 [1982 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg-3.1 [915 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libpython3.11-dev i386 3.11.8-3+b2 [4636 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.11.8-1 [9600 B] Get: 88 http://deb.debian.org/debian unstable/main i386 libpython3.12-stdlib i386 3.12.2-4+b2 [1889 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libpython3.12t64 i386 3.12.2-4+b2 [2139 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libpython3.12-dev i386 3.12.2-4+b2 [5000 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libpython3-all-dev i386 3.11.8-1 [1068 B] Get: 92 http://deb.debian.org/debian unstable/main i386 python-babel-localedata all 2.10.3-3 [5611 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 python3.12 i386 3.12.2-4+b2 [653 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.11.8-1 [1056 B] Get: 96 http://deb.debian.org/debian unstable/main i386 python3.11-dev i386 3.11.8-3+b2 [501 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.11.8-1 [26.1 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 python3.12-dev i386 3.12.2-4+b2 [499 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 python3-all-dev i386 3.11.8-1 [1072 B] Get: 100 http://deb.debian.org/debian unstable/main i386 python3-tz all 2024.1-2 [30.9 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 python3-babel all 2.10.3-3 [100.0 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 python3-certifi all 2023.11.17-1 [155 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 python3-charset-normalizer all 3.3.2-1 [51.6 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 python3-roman all 3.3-3 [9880 B] Get: 106 http://deb.debian.org/debian unstable/main i386 python3-docutils all 0.20.1+dfsg-3 [389 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 sphinx-common all 7.2.6-6 [702 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 109 http://deb.debian.org/debian unstable/main i386 python3-markupsafe i386 2.1.5-1 [14.4 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 python3-jinja2 all 3.1.3-1 [119 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 python3-packaging all 23.2-1 [44.8 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 python3-idna all 3.6-2 [37.0 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 python3-six all 1.16.0-6 [16.3 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 python3-urllib3 all 1.26.18-2 [116 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 python3-requests all 2.31.0+dfsg-1 [68.6 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 python3-sphinx all 7.2.6-6 [552 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 python3-guzzle-sphinx-theme all 0.7.11-6 [1346 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 python3-iniconfig all 1.1.1-2 [6396 B] Get: 121 http://deb.debian.org/debian unstable/main i386 python3-pluggy all 1.4.0-1 [26.2 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 python3-pytest all 8.1.1-1 [245 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 python3-pytest-runner all 2.11.1-4 [8432 B] Get: 124 http://deb.debian.org/debian unstable/main i386 python3-screed all 1.1.3-1 [109 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 python3-sphinxcontrib.autoprogram all 0.1.8-2 [10.6 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 rdfind i386 1.6.0-1+b1 [47.8 kB] Fetched 76.0 MB in 2s (47.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.8-3+b2_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.8-3+b2) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.2-1_i386.deb ... Unpacking libexpat1:i386 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.8-3+b2_i386.deb ... Unpacking python3.11-minimal (3.11.8-3+b2) ... Setting up libpython3.11-minimal:i386 (3.11.8-3+b2) ... Setting up libexpat1:i386 (2.6.2-1) ... Setting up python3.11-minimal (3.11.8-3+b2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20022 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_i386.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-1_all.deb ... Unpacking tzdata (2024a-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../5-libreadline8t64_8.2-4_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:i386. Preparing to unpack .../6-libpython3.11-stdlib_3.11.8-3+b2_i386.deb ... Unpacking libpython3.11-stdlib:i386 (3.11.8-3+b2) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.8-3+b2_i386.deb ... Unpacking python3.11 (3.11.8-3+b2) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21016 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_i386.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libpython3.12-minimal:i386. Preparing to unpack .../001-libpython3.12-minimal_3.12.2-4+b2_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.2-4+b2) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../002-python3.12-minimal_3.12.2-4+b2_i386.deb ... Unpacking python3.12-minimal (3.12.2-4+b2) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.1.5-1.1_i386.deb ... Unpacking openssl (3.1.5-1.1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. 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Unpacking ruby-webrick (1.8.1-1) ... Selecting previously unselected package ruby-xmlrpc. Preparing to unpack .../020-ruby-xmlrpc_0.3.2-2_all.deb ... Unpacking ruby-xmlrpc (0.3.2-2) ... Selecting previously unselected package ruby-sdbm:i386. Preparing to unpack .../021-ruby-sdbm_1.0.0-5+b3_i386.deb ... Unpacking ruby-sdbm:i386 (1.0.0-5+b3) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../022-libbsd0_0.12.2-1_i386.deb ... Unpacking libbsd0:i386 (0.12.2-1) ... Selecting previously unselected package libedit2:i386. Preparing to unpack .../023-libedit2_3.1-20230828-1_i386.deb ... Unpacking libedit2:i386 (3.1-20230828-1) ... Selecting previously unselected package libncurses6:i386. Preparing to unpack .../024-libncurses6_6.4+20240113-1_i386.deb ... Unpacking libncurses6:i386 (6.4+20240113-1) ... Selecting previously unselected package libyaml-0-2:i386. Preparing to unpack .../025-libyaml-0-2_0.2.5-1_i386.deb ... Unpacking libyaml-0-2:i386 (0.2.5-1) ... Selecting previously unselected package libruby3.1t64:i386. Preparing to unpack .../026-libruby3.1t64_3.1.2-8.3_i386.deb ... Unpacking libruby3.1t64:i386 (3.1.2-8.3) ... Selecting previously unselected package ruby3.1. Preparing to unpack .../027-ruby3.1_3.1.2-8.3_i386.deb ... Unpacking ruby3.1 (3.1.2-8.3) ... Selecting previously unselected package libruby:i386. Preparing to unpack .../028-libruby_1%3a3.1+nmu1_i386.deb ... Unpacking libruby:i386 (1:3.1+nmu1) ... Selecting previously unselected package ruby-rubygems. Preparing to unpack .../029-ruby-rubygems_3.4.20-1_all.deb ... Unpacking ruby-rubygems (3.4.20-1) ... Selecting previously unselected package ruby. Preparing to unpack .../030-ruby_1%3a3.1+nmu1_i386.deb ... Unpacking ruby (1:3.1+nmu1) ... Selecting previously unselected package ruby-asciidoctor. Preparing to unpack .../031-ruby-asciidoctor_2.0.20-1_all.deb ... Unpacking ruby-asciidoctor (2.0.20-1) ... Selecting previously unselected package asciidoctor. 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Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../039-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../040-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../041-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../042-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../043-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../044-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../045-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../046-libelf1t64_0.191-1_i386.deb ... Unpacking libelf1t64:i386 (0.191-1) ... Selecting previously unselected package dwz. Preparing to unpack .../047-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../048-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../049-libxml2_2.9.14+dfsg-1.3+b2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../050-gettext_0.21-14+b1_i386.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../051-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../052-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../053-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package dh-exec. Preparing to unpack .../054-dh-exec_0.29_i386.deb ... Unpacking dh-exec (0.29) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../055-python3-lib2to3_3.12.2-3_all.deb ... Unpacking python3-lib2to3 (3.12.2-3) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../056-python3-distutils_3.12.2-3_all.deb ... Unpacking python3-distutils (3.12.2-3) ... 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Setting up libncurses6:i386 (6.4+20240113-1) ... Setting up ruby-net-telnet (0.2.0-1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up ruby-webrick (1.8.1-1) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up libjson-perl (4.10000-1) ... Setting up fonts-liberation (1:2.1.5-3) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up openssl (3.1.5-1.1) ... Setting up libbsd0:i386 (0.12.2-1) ... Setting up readline-common (8.2-4) ... Setting up ruby-xmlrpc (0.3.2-2) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libbz2-dev:i386 (1.0.8-5.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up python3.12-minimal (3.12.2-4+b2) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libedit2:i386 (3.1-20230828-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-sphinxdoc (7.2.6-6) ... Setting up libreadline8t64:i386 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up xml-core (0.19) ... Setting up libpython3.12-stdlib:i386 (3.12.2-4+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:i386 (3.11.8-3+b2) ... Setting up python3.12 (3.12.2-4+b2) ... Setting up libpython3.11t64:i386 (3.11.8-3+b2) ... Setting up rubygems-integration (1.18) ... Setting up man-db (2.12.0-3+b1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3.12t64:i386 (3.12.2-4+b2) ... Setting up libpython3.11-dev:i386 (3.11.8-3+b2) ... Setting up sphinx-common (7.2.6-6) ... Setting up libpython3-stdlib:i386 (3.11.8-1) ... Setting up python3.11 (3.11.8-3+b2) ... Setting up libpython3-dev:i386 (3.11.8-1) ... Setting up python3.11-dev (3.11.8-3+b2) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up dh-exec (0.29) ... Setting up libpython3.12-dev:i386 (3.12.2-4+b2) ... Setting up python3-markupsafe (2.1.5-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-6) ... Setting up python3-roman (3.3-3) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (23.2-1) ... Setting up python3-certifi (2023.11.17-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up libpython3-all-dev:i386 (3.11.8-1) ... Setting up python3-idna (3.6-2) ... Setting up python3.12-dev (3.12.2-4+b2) ... Setting up cython3 (3.0.8-1) ... Setting up python3-urllib3 (1.26.18-2) ... Setting up python3-pluggy (1.4.0-1) ... Setting up python3-lib2to3 (3.12.2-3) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.2-3) ... python3.12: can't get files for byte-compilation Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-screed (1.1.3-1) ... Setting up python3-babel (2.10.3-3) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-pytest (8.1.1-1) ... Setting up python3-alabaster (0.7.12-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-requests (2.31.0+dfsg-1) ... Setting up python3-pytest-runner (2.11.1-4) ... Setting up dh-python (6.20240310) ... Setting up python3-all-dev (3.11.8-1) ... Setting up rake (13.0.6-3) ... Setting up ruby3.1 (3.1.2-8.3) ... Setting up ruby-sdbm:i386 (1.0.0-5+b3) ... Setting up ruby-rubygems (3.4.20-1) ... Setting up libruby3.1t64:i386 (3.1.2-8.3) ... Setting up libruby:i386 (1:3.1+nmu1) ... Setting up ruby (1:3.1+nmu1) ... Setting up ruby-asciidoctor (2.0.20-1) ... Setting up asciidoctor (2.0.20-1) ... Processing triggers for libc-bin (2.37-15.1) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.20.1+dfsg-3) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.20.1+dfsg-3) ... Setting up python3-sphinx (7.2.6-6) ... Setting up python3-guzzle-sphinx-theme (0.7.11-6) ... Setting up python3-sphinxcontrib.autoprogram (0.1.8-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/khmer-3.0.0~a3+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../khmer_3.0.0~a3+dfsg-9~0exp_source.changes dpkg-buildpackage: info: source package khmer dpkg-buildpackage: info: source version 3.0.0~a3+dfsg-9~0exp dpkg-buildpackage: info: source distribution experimental dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with sphinxdoc --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg' dh_auto_clean || /bin/true pybuild --clean -i python{version} -p "3.12 3.11" I: pybuild base:305: python3.12 setup.py clean /build/reproducible-path/khmer-3.0.0~a3+dfsg/versioneer.py:421: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY['git'] = ''' *** NOTE: Found Cython, extension files will be transpiled if this is an install invocation. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) /usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running clean removing '/build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it I: pybuild base:305: python3.11 setup.py clean *** NOTE: Found Cython, extension files will be transpiled if this is an install invocation. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) /usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running clean removing '/build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; cd src/oxli && /usr/bin/make clean make[2]: Entering directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg/src/oxli' (cd ../../third-party/cqf && make clean) make[3]: Entering directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg/third-party/cqf' rm -f *.o gqf.o make[3]: Leaving directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg/third-party/cqf' rm -f *.o *.a *.so* oxli.pc make[2]: Leaving directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg/src/oxli' rm -rf __pycache__ .eggs make[1]: Leaving directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/khmer-common.substvars debian/khmer.substvars debian/liboxli1.substvars debian/liboxli-dev.substvars ./khmer/_oxli/assembly.cpp ./khmer/_oxli/graphs.cpp ./khmer/_oxli/hashing.cpp ./khmer/_oxli/hashset.cpp ./khmer/_oxli/hllcounter.cpp ./khmer/_oxli/labeling.cpp ./khmer/_oxli/legacy_partitioning.cpp ./khmer/_oxli/parsing.cpp ./khmer/_oxli/readaligner.cpp ./khmer/_oxli/traversal.cpp ./khmer/_oxli/utils.cpp debian/files rm -fr -- debian/khmer-common/ debian/tmp/ debian/khmer/ debian/liboxli1/ debian/liboxli-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.12 3.11" I: pybuild base:305: python3.12 setup.py config /build/reproducible-path/khmer-3.0.0~a3+dfsg/versioneer.py:421: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY['git'] = ''' *** NOTE: Found Cython, extension files will be transpiled if this is an install invocation. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) /usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running config I: pybuild base:305: python3.11 setup.py config *** NOTE: Found Cython, extension files will be transpiled if this is an install invocation. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) /usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg' dh_auto_build pybuild --build -i python{version} -p "3.12 3.11" I: pybuild base:305: /usr/bin/python3.12 setup.py build *** NOTE: Found Cython, extension files will be transpiled if this is an install invocation. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) /usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running build running build_py creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/khmer_logger.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/khmer_args.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/thread_utils.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/trimming.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/kfile.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/_version.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer copying khmer/utils.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_hashset.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_filter_abund.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/table_fixtures.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_assembly.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_script_arguments.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_counttable.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_scripts.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_threaded_sequence_processor.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_read_aligner.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_read_parsers.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_script_output.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_functions.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_graph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_sandbox_scripts.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/graph_features.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_streaming_io.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_sequence_validation.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_counting_single.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_cython_parsing.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_oxli_functions.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_memory.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_hll.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_lump.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/khmer_tst_utils.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_read_handling.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_labelhash.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_nibblestorage.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_subset_graph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_normalize_by_median.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_qfstorage.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_tabletype.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_banding.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_nodegraph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_version.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_countgraph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests copying tests/test_cpython_hierarchy.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/oxli copying oxli/partition.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/oxli copying oxli/functions.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/oxli copying oxli/build_graph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/oxli copying oxli/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/oxli creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli running egg_info creating khmer.egg-info writing khmer.egg-info/PKG-INFO writing dependency_links to khmer.egg-info/dependency_links.txt writing requirements to khmer.egg-info/requires.txt writing top-level names to khmer.egg-info/top_level.txt writing manifest file 'khmer.egg-info/SOURCES.txt' dependency include/oxli/khmer.hh won't be automatically included in the manifest: the path doesn't exist reading manifest file 'khmer.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'ChangeLog' warning: no files found matching 'ez_setup.py' warning: no files found matching 'IDEAS' warning: no files found matching 'README.md' warning: no files found matching 'TODO' warning: no files found matching '.ycm_extra_conf.py' warning: no files found matching '*.hh' under directory 'lib' warning: no files found matching '*.cc' under directory 'lib' warning: no files found matching '[Mm]akefile*' under directory 'lib' warning: no files found matching 'get_version.py' under directory 'lib' warning: no files found matching '*.cpp' under directory 'khmer/_oxli' warning: no files found matching '*.1' under directory 'third-party' warning: no files found matching '*.xsl' under directory 'third-party' warning: no files found matching 'sample*' under directory 'third-party' warning: no files found matching 'words*' under directory 'third-party' warning: no files found matching '*.sh' under directory 'third-party' warning: no files found matching 'manual*' under directory 'third-party' warning: no files found matching '*.pl' under directory 'third-party' warning: no files found matching '*.dsp' under directory 'third-party' warning: no files found matching 'CHANGES' under directory 'third-party' warning: no files found matching '*.txt' under directory 'third-party' warning: no files found matching 'FAQ' under directory 'third-party' warning: no files found matching 'INDEX' under directory 'third-party' warning: no files found matching 'configure' under directory 'third-party' warning: no files found matching '*.xsl' under directory 'third-party' warning: no files found matching 'bzip.css' under directory 'third-party/bzip2' warning: no files found matching 'entities.xml' under directory 'third-party/bzip2' warning: no files found matching 'libbz2.def' under directory 'third-party/bzip2' warning: no files found matching 'LICENSE' under directory 'third-party/bzip2' warning: no files found matching 'third-party/zlib/zconf.h.in' warning: no files found matching 'third-party/zlib/zlib.pc.in' warning: no previously-included files found matching 'third-party/zlib/Makefile' warning: no previously-included files found matching 'third-party/zlib/zconf.h' warning: no files found matching 'README.txt' under directory 'scripts' warning: no previously-included files matching '*.orig' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'khmer.egg-info/SOURCES.txt' copying tests/.gitignore -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.truncated.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.truncated.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/README.rst -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/all-A.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k12.ct -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k12.ht -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k32.stoptags -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k32.tagset -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/banding-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/biglump-random-20-a.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/bogus.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/branched-genome.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/casava_18-pe.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/combine_parts_1.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/dn-test-all-paired-all-keep.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/dn-test-none-paired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/dn-test-some-paired-all-keep.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/empty-file -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/empty-file.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/empty-file.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/fakelump.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/fakelump.fa.stoptags.txt -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/filter-test-A.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/filter-test-B.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k12.ht -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k12.ht.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k32.stoptags -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k32.tagset -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/multi-output.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/normC20k20.ct -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/old-style-format-w-comments.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.badleft -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.badright -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.paired_bad -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken2.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken2.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken3.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken3.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken4.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken4.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed-2.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed-broken.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed-witherror.fa.pe -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fa.pe -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fa.se -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fq.pe -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fq.se -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-slash1.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-slash1.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired-slash1.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fa.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fa.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.malformat.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired.malformat.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/paired_one.base.dif.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-X2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.even.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa.part -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fq.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fq.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.odd.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-b.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/random-31-c.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/readaligner-default.json -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/readaligner-k12.json -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/real-partition-small.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/real-partition-tiny.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/seq-a.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/seq-b.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/simple-genome-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/simple-genome.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/single-read.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/single-read.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fa.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fa.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.paired.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.paired2.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-3.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-impaired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-paired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-paired.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-empty.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-empty.fa.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-error-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-fastq-n-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-fastq-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-fastq-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-filter-abund-Ns.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-graph.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-graph2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-graph5.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-labels.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-large.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-multi.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-output-partitions.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-overlap1.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-overlap2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-reads.fq.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-reads.fq.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-short.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-sweep-contigs.fp -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-sweep-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-sweep-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/test-transcript.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/truncated.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/unclean-reads.fastq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying tests/test-data/valid-read-testing.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/tests/test-data copying khmer/_oxli/assembly.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/assembly.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/graphs.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/graphs.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/hashing.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/hashing.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/hashset.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/hashset.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/hllcounter.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/hllcounter.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/labeling.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/labeling.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/legacy_partitioning.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/legacy_partitioning.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/oxli_exception_convert.cc -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/oxli_exception_convert.hh -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/oxli_types.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/parsing.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/parsing.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/readaligner.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/readaligner.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/traversal.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/traversal.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/utils.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli copying khmer/_oxli/utils.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_oxli UPDATING /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_version.py set /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.12_khmer/build/khmer/_version.py to '3.0.0a3' running build_ext error: ['khmer', 'khmer.tests', 'oxli', 'khmer._oxli'] require 64-bit operating system E: pybuild pybuild:389: build: plugin distutils failed with: exit code=1: /usr/bin/python3.12 setup.py build I: pybuild base:305: /usr/bin/python3 setup.py build *** NOTE: Found Cython, extension files will be transpiled if this is an install invocation. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) /usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. /usr/lib/python3/dist-packages/setuptools/dist.py:744: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'include-dirs' will not be supported in future versions. Please use the underscore name 'include_dirs' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running build running build_py creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/khmer_logger.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/khmer_args.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/thread_utils.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/trimming.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/kfile.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/_version.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer copying khmer/utils.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_hashset.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_filter_abund.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/table_fixtures.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_assembly.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_script_arguments.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_counttable.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_scripts.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_threaded_sequence_processor.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_read_aligner.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_read_parsers.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_script_output.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_functions.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_graph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_sandbox_scripts.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/graph_features.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_streaming_io.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_sequence_validation.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_counting_single.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_cython_parsing.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_oxli_functions.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_memory.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_hll.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_lump.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/khmer_tst_utils.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_read_handling.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_labelhash.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_nibblestorage.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_subset_graph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_normalize_by_median.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_qfstorage.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_tabletype.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_banding.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_nodegraph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_version.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_countgraph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests copying tests/test_cpython_hierarchy.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/oxli copying oxli/partition.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/oxli copying oxli/functions.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/oxli copying oxli/build_graph.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/oxli copying oxli/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/oxli creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/__init__.py -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli running egg_info writing khmer.egg-info/PKG-INFO writing dependency_links to khmer.egg-info/dependency_links.txt writing requirements to khmer.egg-info/requires.txt writing top-level names to khmer.egg-info/top_level.txt dependency include/oxli/khmer.hh won't be automatically included in the manifest: the path doesn't exist reading manifest file 'khmer.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'ChangeLog' warning: no files found matching 'ez_setup.py' warning: no files found matching 'IDEAS' warning: no files found matching 'README.md' warning: no files found matching 'TODO' warning: no files found matching '.ycm_extra_conf.py' warning: no files found matching '*.hh' under directory 'lib' warning: no files found matching '*.cc' under directory 'lib' warning: no files found matching '[Mm]akefile*' under directory 'lib' warning: no files found matching 'get_version.py' under directory 'lib' warning: no files found matching '*.cpp' under directory 'khmer/_oxli' warning: no files found matching '*.1' under directory 'third-party' warning: no files found matching '*.xsl' under directory 'third-party' warning: no files found matching 'sample*' under directory 'third-party' warning: no files found matching 'words*' under directory 'third-party' warning: no files found matching '*.sh' under directory 'third-party' warning: no files found matching 'manual*' under directory 'third-party' warning: no files found matching '*.pl' under directory 'third-party' warning: no files found matching '*.dsp' under directory 'third-party' warning: no files found matching 'CHANGES' under directory 'third-party' warning: no files found matching '*.txt' under directory 'third-party' warning: no files found matching 'FAQ' under directory 'third-party' warning: no files found matching 'INDEX' under directory 'third-party' warning: no files found matching 'configure' under directory 'third-party' warning: no files found matching '*.xsl' under directory 'third-party' warning: no files found matching 'bzip.css' under directory 'third-party/bzip2' warning: no files found matching 'entities.xml' under directory 'third-party/bzip2' warning: no files found matching 'libbz2.def' under directory 'third-party/bzip2' warning: no files found matching 'LICENSE' under directory 'third-party/bzip2' warning: no files found matching 'third-party/zlib/zconf.h.in' warning: no files found matching 'third-party/zlib/zlib.pc.in' warning: no previously-included files found matching 'third-party/zlib/Makefile' warning: no previously-included files found matching 'third-party/zlib/zconf.h' warning: no files found matching 'README.txt' under directory 'scripts' warning: no previously-included files matching '*.orig' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'khmer.egg-info/SOURCES.txt' copying tests/.gitignore -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests creating /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.truncated.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/100-reads.fq.truncated.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/README.rst -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/all-A.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k12.ct -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k12.ht -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k32.stoptags -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/badversion-k32.tagset -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/banding-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/biglump-random-20-a.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/bogus.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/branched-genome.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/casava_18-pe.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/combine_parts_1.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/dn-test-all-paired-all-keep.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/dn-test-none-paired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/dn-test-some-paired-all-keep.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/empty-file -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/empty-file.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/empty-file.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/fakelump.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/fakelump.fa.stoptags.txt -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/filter-test-A.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/filter-test-B.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k12.ht -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k12.ht.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k32.stoptags -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/goodversion-k32.tagset -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/multi-output.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/normC20k20.ct -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/old-style-format-w-comments.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.badleft -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.badright -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken.fq.paired_bad -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken2.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken2.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken3.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken3.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken4.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-broken4.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed-2.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed-broken.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed-witherror.fa.pe -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fa.pe -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fa.se -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fq.pe -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-mixed.fq.se -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-slash1.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-slash1.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired-slash1.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fa.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fa.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fq.1 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.malformat.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired.malformat.fq.2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/paired_one.base.dif.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-X2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.even.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fa.part -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fq.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.fq.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-a.odd.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-20-b.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/random-31-c.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/readaligner-default.json -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/readaligner-k12.json -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/real-partition-small.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/real-partition-tiny.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/seq-a.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/seq-b.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/simple-genome-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/simple-genome.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/single-read.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/single-read.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fa.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fa.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.paired.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-2.paired2.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-3.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-impaired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-paired.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read-paired.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-abund-read.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-empty.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-empty.fa.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-error-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-fastq-n-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-fastq-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-fastq-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-filter-abund-Ns.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-graph.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-graph2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-graph5.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-labels.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-large.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-multi.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-output-partitions.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-overlap1.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-overlap2.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-reads.fq.bz2 -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-reads.fq.gz -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-short.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-sweep-contigs.fp -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-sweep-reads.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-sweep-reads.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/test-transcript.fa -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/truncated.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/unclean-reads.fastq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying tests/test-data/valid-read-testing.fq -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/tests/test-data copying khmer/_oxli/assembly.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/assembly.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/graphs.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/graphs.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/hashing.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/hashing.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/hashset.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/hashset.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/hllcounter.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/hllcounter.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/labeling.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/labeling.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/legacy_partitioning.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/legacy_partitioning.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/oxli_exception_convert.cc -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/oxli_exception_convert.hh -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/oxli_types.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/parsing.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/parsing.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/readaligner.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/readaligner.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/traversal.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/traversal.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/utils.pxd -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli copying khmer/_oxli/utils.pyx -> /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_oxli UPDATING /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_version.py set /build/reproducible-path/khmer-3.0.0~a3+dfsg/.pybuild/cpython3_3.11_khmer/build/khmer/_version.py to '3.0.0a3' running build_ext error: ['khmer', 'khmer.tests', 'oxli', 'khmer._oxli'] require 64-bit operating system E: pybuild pybuild:389: build: plugin distutils failed with: exit code=1: /usr/bin/python3 setup.py build dh_auto_build: error: pybuild --build -i python{version} -p "3.12 3.11" returned exit code 13 make[1]: *** [debian/rules:19: override_dh_auto_build] Error 25 make[1]: Leaving directory '/build/reproducible-path/khmer-3.0.0~a3+dfsg' make: *** [debian/rules:16: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/126656 and its subdirectories Fri Mar 29 11:56:03 UTC 2024 W: No second build log, what happened?