Sat May 11 20:30:04 UTC 2024 I: starting to build concavity/trixie/armhf on jenkins on '2024-05-11 20:29' Sat May 11 20:30:04 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_4/5215/console.log Sat May 11 20:30:05 UTC 2024 I: Downloading source for trixie/concavity=0.1+dfsg.1-5 --2024-05-11 20:30:05-- http://deb.debian.org/debian/pool/main/c/concavity/concavity_0.1%2bdfsg.1-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2052 (2.0K) [text/prs.lines.tag] Saving to: ‘concavity_0.1+dfsg.1-5.dsc’ 0K .. 100% 229M=0s 2024-05-11 20:30:05 (229 MB/s) - ‘concavity_0.1+dfsg.1-5.dsc’ saved [2052/2052] Sat May 11 20:30:05 UTC 2024 I: concavity_0.1+dfsg.1-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: concavity Binary: concavity Architecture: any Version: 0.1+dfsg.1-5 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Andreas Tille Homepage: https://compbio.cs.princeton.edu/concavity/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/concavity Vcs-Git: https://salsa.debian.org/med-team/concavity.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: concavity deb science optional arch=any Checksums-Sha1: dbc00046f42c9523b68fdc4a0a660e3d5bb375bd 310216 concavity_0.1+dfsg.1.orig.tar.xz 02a6e3489bc707b75f276a239078f40982c1654c 14600 concavity_0.1+dfsg.1-5.debian.tar.xz Checksums-Sha256: a73bd2c8781e90c7e4d0e350deaff94ebde08391038a6abe551df2da05e3f819 310216 concavity_0.1+dfsg.1.orig.tar.xz 09c03158d432d59e9c1f4ac78aef7a0b5c1c5f1712f9787c783b6e836c881f50 14600 concavity_0.1+dfsg.1-5.debian.tar.xz Files: c02e7e028b066ee61ac021fc6d185e4e 310216 concavity_0.1+dfsg.1.orig.tar.xz 69740ad71ac6022b91553750679b7780 14600 concavity_0.1+dfsg.1-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/H6lIRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEZ6Q/+PK4FMDaXJDR/bxA75hqx9d9RC2ivqq88 MPgIRBIILmtciDNZsjNqLunBztwt+ANar7IBc4hPjKIgBkSl/Dy1sdxVA+FUockG cjlM5IQQtnIwe+1HBE+zfB3oIfpsVvDdlngP6opNQRxm8mgtndF7Wq/h357ZTu7m gWHi3Nccq4i2ORt4amcpsCC0O6cGigH9xTBziBz6O63v1BXftXt5p2Mh7O+ILm3y 0z+6WirJ4Q4tC5/JJboccquGOsm3mri5h8AQpj79mPEQUJTXXt6V9NOCMqfixRcG mdc4Tx8Vb2yFy6FEDPztxudg+z21RwLdmx4v4omtomkK6ydSAYNtLniWQ3Wga+jF RFNq6WAV/9dru3buN5CA6MlZMUf7k6epZMYAnoPD8Y42h6/ziUdr/iQ/Y1yPBL58 y2bop9VfiMDJaBOLvoYGaYOT65VDdocj3YV9WNPLNhrpiV4860KZZGS9CfJ03xx5 tzAZjIAT0HSyMmwa+msKB/eM/UPqha5uaS/2NN9zaHTjK+H0rwxZmObzGHScu7mN +xBBRaIu85N1+gnFhI9ci55TY5/dv/I0DDGykQwcqTgDRIecjjcrl0LZ21Vq/884 YsVd0/myyHQDc91rHNh1Uw4g3I93X4E6XdSbRYaccxdlcbJpi4Yhh7iukPRsY9WL oOmPaJoYt/I= =7R4c -----END PGP SIGNATURE----- Sat May 11 20:30:05 UTC 2024 I: Checking whether the package is not for us Sat May 11 20:30:05 UTC 2024 I: Starting 1st build on remote node virt64z-armhf-rb.debian.net. Sat May 11 20:30:05 UTC 2024 I: Preparing to do remote build '1' on virt64z-armhf-rb.debian.net. Sat May 11 20:32:10 UTC 2024 I: Deleting $TMPDIR on virt64z-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat May 11 08:30:11 -12 2024 I: pbuilder-time-stamp: 1715459411 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [concavity_0.1+dfsg.1-5.dsc] I: copying [./concavity_0.1+dfsg.1.orig.tar.xz] I: copying [./concavity_0.1+dfsg.1-5.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Dec 2 19:26:10 2020 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./concavity_0.1+dfsg.1-5.dsc: no acceptable signature found dpkg-source: info: extracting concavity in concavity-0.1+dfsg.1 dpkg-source: info: unpacking concavity_0.1+dfsg.1.orig.tar.xz dpkg-source: info: unpacking concavity_0.1+dfsg.1-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying default_target_all dpkg-source: info: applying safe_recursive_make dpkg-source: info: applying freeglut dpkg-source: info: applying CFLAGSasf dpkg-source: info: applying spelling dpkg-source: info: applying noopengllink dpkg-source: info: applying compiler_errors dpkg-source: info: applying manpage dpkg-source: info: applying threshold_range_cutoff dpkg-source: info: applying remove_ply dpkg-source: info: applying cross.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/32553/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='14336d985b324b7fb92860875251d20f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='32553' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qocfN7sc/pbuilderrc_fOz1 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qocfN7sc/b1 --logfile b1/build.log concavity_0.1+dfsg.1-5.dsc' SUDO_GID='110' SUDO_UID='103' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64z 6.1.0-21-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 11 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/32553/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19446 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.4 MB of archives. After unpacking 68.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Fetched 18.4 MB in 0s (90.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19446 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_armhf.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40-8_armhf.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-1_armhf.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../22-libelf1t64_0.191-1+b1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.3+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.38-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/concavity-0.1+dfsg.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../concavity_0.1+dfsg.1-5_source.changes dpkg-buildpackage: info: source package concavity dpkg-buildpackage: info: source version 0.1+dfsg.1-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1' rm -f ChangeLog make[1]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1' make target "TARGET=opt" make[2]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1' cd pkgs && make opt sed -e 's|__docdir__|/usr/share/doc/concavity|g;s|__pkgdatadir__||g;s|__sysconfdir__||g;s|__bindir__||g;s|__VERSION__|0.1.1|g;s|__PACKAGE_VERSION__||g;' "concavity.1.pod" | \ pod2man -c 'User Commands' -r "0.1.1" -name CONCAVITY > "concavity.1" make[3]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs' make target "TARGET=opt" make[4]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs' cd RNBasics && make opt make[5]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/RNBasics' make ../../lib/aarch64/libRNBasics.a "CFLAGS="-Wno-write-strings" -Wall -I. -I../../pkgs -O3 -DNDEBUG "-Wno-write-strings" -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security" make[6]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/RNBasics' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNBasics.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNTime.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNGrfx.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNRgb.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNHeap.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNQueue.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNArray.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNSvd.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNIntval.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNScalar.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNType.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNFlags.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNMem.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNError.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c RNBase.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ mkdir -p ../../lib/aarch64 rm -f ../../lib/aarch64/libRNBasics.a ar ur ../../lib/aarch64/libRNBasics.a RNBasics.o RNTime.o RNGrfx.o RNRgb.o RNHeap.o RNQueue.o RNArray.o RNSvd.o RNIntval.o RNScalar.o RNType.o RNFlags.o RNMem.o RNError.o RNBase.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating ../../lib/aarch64/libRNBasics.a make[6]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/RNBasics' make[5]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/RNBasics' cd R2Shapes && make opt make[5]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R2Shapes' make ../../lib/aarch64/libR2Shapes.a "CFLAGS="-Wno-write-strings" -Wall -I. -I../../pkgs -O3 -DNDEBUG "-Wno-write-strings" -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security" make[6]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R2Shapes' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Shapes.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Draw.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Io.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Dist.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Cont.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Isect.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Parall.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Perp.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Relate.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Grid.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Arc.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Curve.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ R2Grid.C: In member function 'int R2Grid::WriteRAW(const char*) const': R2Grid.C:2325:54: warning: narrowing conversion of '(int)((const R2Grid*)this)->R2Grid::grid_resolution[0]' from 'int' to 'unsigned int' [-Wnarrowing] 2325 | unsigned int header[4] = { magic, grid_resolution[0], grid_resolution[1], 1 }; | ~~~~~~~~~~~~~~~~~^ R2Grid.C:2325:74: warning: narrowing conversion of '(int)((const R2Grid*)this)->R2Grid::grid_resolution[1]' from 'int' to 'unsigned int' [-Wnarrowing] 2325 | unsigned int header[4] = { magic, grid_resolution[0], grid_resolution[1], 1 }; | ~~~~~~~~~~~~~~~~~^ R2Grid.C: In member function 'int R2Grid::ReadPFM(const char*)': R2Grid.C:2373:9: warning: variable 'endian' set but not used [-Wunused-but-set-variable] 2373 | float endian; | ^~~~~~ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Polygon.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Circle.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Box.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Solid.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Shape.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Affine.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Xform.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Matrix.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Halfspace.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Span.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Ray.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Line.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Point.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Vector.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R2Image.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ R2Image.C: In member function 'int R2Image::ReadPFM(const char*)': R2Image.C:856:8: warning: variable 'endian_string' set but not used [-Wunused-but-set-variable] 856 | char endian_string[256]; | ^~~~~~~~~~~~~ R2Image.C: In member function 'int R2Image::WriteRAW(const char*) const': R2Image.C:1305:37: warning: narrowing conversion of '(int)((const R2Image*)this)->R2Image::width' from 'int' to 'unsigned int' [-Wnarrowing] 1305 | unsigned int header[4] = { magic, width, height, ncomponents }; | ^~~~~ R2Image.C:1305:44: warning: narrowing conversion of '(int)((const R2Image*)this)->R2Image::height' from 'int' to 'unsigned int' [-Wnarrowing] 1305 | unsigned int header[4] = { magic, width, height, ncomponents }; | ^~~~~~ R2Image.C:1305:52: warning: narrowing conversion of '(int)((const R2Image*)this)->R2Image::ncomponents' from 'int' to 'unsigned int' [-Wnarrowing] 1305 | unsigned int header[4] = { magic, width, height, ncomponents }; | ^~~~~~~~~~~ mkdir -p ../../lib/aarch64 rm -f ../../lib/aarch64/libR2Shapes.a ar ur ../../lib/aarch64/libR2Shapes.a R2Shapes.o R2Draw.o R2Io.o R2Dist.o R2Cont.o R2Isect.o R2Parall.o R2Perp.o R2Relate.o R2Grid.o R2Arc.o R2Curve.o R2Polygon.o R2Circle.o R2Box.o R2Solid.o R2Shape.o R2Affine.o R2Xform.o R3Matrix.o R2Halfspace.o R2Span.o R2Ray.o R2Line.o R2Point.o R2Vector.o R2Image.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating ../../lib/aarch64/libR2Shapes.a make[6]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R2Shapes' make[5]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R2Shapes' cd R3Shapes && make opt make[5]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R3Shapes' make ../../lib/aarch64/libR3Shapes.a "CFLAGS="-Wno-write-strings" -Wall -I. -I../../pkgs -O3 -DNDEBUG "-Wno-write-strings" -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security" make[6]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R3Shapes' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Shapes.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Draw.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3MeshSearchTree.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Kdtree.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Isect.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Cont.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Dist.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Parall.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Perp.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Relate.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Align.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Mesh.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Ellipse.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ R3Mesh.C: In member function 'R3MeshType R3Mesh::Intersection(const R3Ray&, R3MeshIntersection*) const': R3Mesh.C:1705:14: warning: variable 'min_t' set but not used [-Wunused-but-set-variable] 1705 | RNScalar min_t = FLT_MAX; | ^~~~~ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Circle.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3TriangleArray.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Triangle.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Surface.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Ellipsoid.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from ../../pkgs/R3Shapes/R3Shapes.h:95, from R3Mesh.C:8: ../../pkgs/R3Shapes/R3Mesh.h: In member function 'int R3Mesh::ReadFile(const char*)': ../../pkgs/R3Shapes/R3Mesh.h:908:10: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' specified bound 128 equals destination size [-Wstringop-truncation] 908 | strncpy(this->name, name, R3_MESH_NAME_LENGTH); | ^ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Sphere.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Cone.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Cylinder.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Box.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Solid.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Shape.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Affine.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Xform.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Crdsys.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Triad.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R4Matrix.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Grid.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Halfspace.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Plane.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Span.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Ray.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Line.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Point.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Vector.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c R3Base.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ mkdir -p ../../lib/aarch64 rm -f ../../lib/aarch64/libR3Shapes.a ar ur ../../lib/aarch64/libR3Shapes.a R3Shapes.o R3Draw.o R3MeshSearchTree.o R3Kdtree.o R3Isect.o R3Cont.o R3Dist.o R3Parall.o R3Perp.o R3Relate.o R3Align.o R3Mesh.o R3Ellipse.o R3Circle.o R3TriangleArray.o R3Triangle.o R3Surface.o R3Ellipsoid.o R3Sphere.o R3Cone.o R3Cylinder.o R3Box.o R3Solid.o R3Shape.o R3Affine.o R3Xform.o R3Crdsys.o R3Triad.o R4Matrix.o R3Grid.o R3Halfspace.o R3Plane.o R3Span.o R3Ray.o R3Line.o R3Point.o R3Vector.o R3Base.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating ../../lib/aarch64/libR3Shapes.a make[6]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R3Shapes' make[5]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/R3Shapes' #cd R3Graphics && make opt cd PDB && make opt make[5]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/PDB' make ../../lib/aarch64/libPDB.a "CFLAGS="-Wno-write-strings" -Wall -I. -I../../pkgs -O3 -DNDEBUG "-Wno-write-strings" -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security" make[6]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/PDB' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDB.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBElement.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBAminoAcid.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBAtom.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBResidue.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBChain.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ PDBAtom.C: In constructor 'PDBAtom::PDBAtom(PDBModel*, PDBChain*, PDBResidue*, PDBElement*, int, const char*, int, RNScalar, RNScalar, RNScalar, RNScalar, RNScalar, RNScalar, RNBoolean)': PDBAtom.C:39:7: warning: the address of 'PDBAtom::name' will never be NULL [-Waddress] 39 | if (name) { strncpy(this->name, atom_name, 8); this->name[7] = 0; } | ^~~~ In file included from PDB.h:57, from PDBAtom.C:7: PDBAtom.h:60:8: note: 'PDBAtom::name' declared here 60 | char name[8]; | ^~~~ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBModel.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBFile.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ PDBFile.C: In member function 'int PDBFile::ReadConsurfFiles(char*)': PDBFile.C:867:13: warning: variable 'found' set but not used [-Wunused-but-set-variable] 867 | RNBoolean found = 0; | ^~~~~ PDBFile.C: In member function 'int PDBFile::ReadHsspFiles(char*)': PDBFile.C:1009:13: warning: variable 'found' set but not used [-Wunused-but-set-variable] 1009 | RNBoolean found = 0; | ^~~~~ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBBond.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBAtomTypes.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ PDBFile.C: In member function 'int PDBFile::Read(FILE*)': PDBFile.C:271:31: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 4 bytes from a string of length 127 [-Wstringop-truncation] 271 | char resName[4]; strncpy(resName, PDBToken(buffer, 18, 20, len), 4); | ^ PDBFile.C:278:40: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 8 bytes from a string of length 127 [-Wstringop-truncation] 278 | char occupancy_string[8]; strncpy(occupancy_string, PDBToken(buffer, 55, 60, len), 8); | ^ PDBFile.C:271:31: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 4 bytes from a string of length 127 [-Wstringop-truncation] 271 | char resName[4]; strncpy(resName, PDBToken(buffer, 18, 20, len), 4); | ^ PDBFile.C:278:40: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 8 bytes from a string of length 127 [-Wstringop-truncation] 278 | char occupancy_string[8]; strncpy(occupancy_string, PDBToken(buffer, 55, 60, len), 8); | ^ PDBFile.C:280:41: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 8 bytes from a string of length 127 [-Wstringop-truncation] 280 | char tempFactor_string[8]; strncpy(tempFactor_string, PDBToken(buffer, 61, 66, len), 8); | ^ PDBFile.C:280:41: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 8 bytes from a string of length 127 [-Wstringop-truncation] PDBFile.C:282:35: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 4 bytes from a string of length 127 [-Wstringop-truncation] 282 | char elementName[4]; strncpy(elementName, PDBToken(buffer, 77, 78, len), 4); | ^ PDBFile.C:282:35: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 4 bytes from a string of length 127 [-Wstringop-truncation] PDBFile.C:283:37: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 4 bytes from a string of length 127 [-Wstringop-truncation] 283 | char charge_string[4]; strncpy(charge_string, PDBToken(buffer, 79, 80, len), 4); | ^ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBUtil.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ PDBFile.C: In member function 'int PDBFile::ReadGrowFile(char*)': PDBFile.C:1592:35: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 4 bytes from a string of length 127 [-Wstringop-truncation] 1592 | char residue1_name[4]; strncpy(residue1_name, PDBToken(input_line, 15, 17, len), 4); | ^ PDBFile.C:1600:35: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' output may be truncated copying 4 bytes from a string of length 127 [-Wstringop-truncation] 1600 | char residue2_name[4]; strncpy(residue2_name, PDBToken(input_line, 45, 47, len), 4); | ^ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c PDBDistance.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ mkdir -p ../../lib/aarch64 rm -f ../../lib/aarch64/libPDB.a ar ur ../../lib/aarch64/libPDB.a PDB.o PDBElement.o PDBAminoAcid.o PDBAtom.o PDBResidue.o PDBChain.o PDBModel.o PDBFile.o PDBBond.o PDBAtomTypes.o PDBUtil.o PDBDistance.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating ../../lib/aarch64/libPDB.a make[6]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/PDB' make[5]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs/PDB' #cd freeglut && make opt make[4]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs' make[3]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/pkgs' cd apps && make opt make[3]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps' make target "TARGET=opt" make[4]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps' cd concavity && make opt make[5]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps/concavity' make ../../bin/aarch64/concavity "CFLAGS="-Wno-write-strings" -Wall -I. -I../../pkgs -O3 -DNDEBUG "-Wno-write-strings" -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security" "LDFLAGS= -L../../lib/aarch64 -O -L../../lib/aarch64 -g -Wl,-z,relro -Wl,-z,now" make[6]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps/concavity' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c grid_creation.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c pocket_extraction.C g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-write-strings -Wall -I. -I../../pkgs -O3 -DNDEBUG -Wno-write-strings -Wall -I. -I../../pkgs -g -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/concavity-0.1+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c concavity.C cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ mkdir -p ../../bin/aarch64 g++ -o ../../bin/aarch64/concavity -L../../lib/aarch64 -O -L../../lib/aarch64 -g -Wl,-z,relro -Wl,-z,now grid_creation.o pocket_extraction.o concavity.o -lPDB -lR3Shapes -lR2Shapes -lRNBasics make[6]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps/concavity' make[5]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps/concavity' make[4]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps' make[3]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1/apps' make[2]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1' make[1]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/concavity/ dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/concavity-0.1+dfsg.1' sed -ne '/^--- Revision History ---/,/^---/{ /^--- Inst/d; p; }' README.txt > ChangeLog dh_installchangelogs make[1]: Leaving directory '/build/reproducible-path/concavity-0.1+dfsg.1' dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/concavity/usr/bin/concavity contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'concavity' in '../concavity_0.1+dfsg.1-5_armhf.deb'. dpkg-deb: building package 'concavity-dbgsym' in '../concavity-dbgsym_0.1+dfsg.1-5_armhf.deb'. dpkg-genbuildinfo --build=binary -O../concavity_0.1+dfsg.1-5_armhf.buildinfo dpkg-genchanges --build=binary -O../concavity_0.1+dfsg.1-5_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/32553 and its subdirectories I: Current time: Sat May 11 08:31:53 -12 2024 I: pbuilder-time-stamp: 1715459513 Sat May 11 20:32:15 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ff4a-armhf-rb.debian.net. Sat May 11 20:32:15 UTC 2024 I: Preparing to do remote build '2' on ff4a-armhf-rb.debian.net. Sat May 11 20:34:57 UTC 2024 I: Deleting $TMPDIR on ff4a-armhf-rb.debian.net. Sat May 11 20:35:00 UTC 2024 I: concavity_0.1+dfsg.1-5_armhf.changes: Format: 1.8 Date: Wed, 02 Dec 2020 20:23:17 +0100 Source: concavity Binary: concavity concavity-dbgsym Architecture: armhf Version: 0.1+dfsg.1-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: concavity - predictor of protein ligand binding sites from structure and cons Changes: concavity (0.1+dfsg.1-5) unstable; urgency=medium . * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Use secure URI in Homepage field. * Update renamed lintian tag names in lintian overrides. * Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright). * Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP. Checksums-Sha1: 0be86262c08014527771fa8ead4e9fe14d67f417 960268 concavity-dbgsym_0.1+dfsg.1-5_armhf.deb e6071008887f5fbf1451ce1ce956416904e88992 5011 concavity_0.1+dfsg.1-5_armhf.buildinfo 9de1ef2628c7e97df71450ad9ff206e0d92033c3 229412 concavity_0.1+dfsg.1-5_armhf.deb Checksums-Sha256: 94f4c2bd47de7627ffe36ecc7ce9c7fba3d4179d87a23bfc678169d88cccde5f 960268 concavity-dbgsym_0.1+dfsg.1-5_armhf.deb 25249938176f35c26421868d41b120e9d736aefd7b15c5eea61e0f2a5093e85a 5011 concavity_0.1+dfsg.1-5_armhf.buildinfo f092e0c5e07e0a3978d48ddce27e94fa0a0432a21fb82ea980dbf37b7eb2d4df 229412 concavity_0.1+dfsg.1-5_armhf.deb Files: 0bd50bdc88a1d9176de1424e42457e09 960268 debug optional concavity-dbgsym_0.1+dfsg.1-5_armhf.deb 82bf71697324d9ae5ef146164cabc502 5011 science optional concavity_0.1+dfsg.1-5_armhf.buildinfo 1d2371dfdad608d0c570c341cc40f176 229412 science optional concavity_0.1+dfsg.1-5_armhf.deb Sat May 11 20:35:01 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_4-5215.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.qocfN7sc/concavity_0.1+dfsg.1-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.qocfN7sc/concavity_0.1+dfsg.1-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.qocfN7sc/concavity_0.1+dfsg.1-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.qocfN7sc/b1/concavity_0.1+dfsg.1-5_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.qocfN7sc/b2/concavity_0.1+dfsg.1-5_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.384s) 0.384s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.035s) 0.035s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 734ms CPU time consumed: 723ms Sat May 11 21:07:35 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Sat May 11 21:07:35 UTC 2024 I: concavity from trixie built successfully and reproducibly on armhf. Sat May 11 21:07:38 UTC 2024 I: Submitting .buildinfo files to external archives: Sat May 11 21:07:38 UTC 2024 I: Submitting 8.0K b1/concavity_0.1+dfsg.1-5_armhf.buildinfo.asc Sat May 11 21:07:49 UTC 2024 I: Submitting 8.0K b2/concavity_0.1+dfsg.1-5_armhf.buildinfo.asc Sat May 11 21:08:12 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat May 11 21:08:12 UTC 2024 I: Done submitting .buildinfo files. Sat May 11 21:08:12 UTC 2024 I: Removing signed concavity_0.1+dfsg.1-5_armhf.buildinfo.asc files: removed './b1/concavity_0.1+dfsg.1-5_armhf.buildinfo.asc' removed './b2/concavity_0.1+dfsg.1-5_armhf.buildinfo.asc'