Fri May 3 01:23:01 UTC 2024 I: starting to build dazzdb/trixie/armhf on jenkins on '2024-05-03 01:22' Fri May 3 01:23:01 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_19/2934/console.log Fri May 3 01:23:01 UTC 2024 I: Downloading source for trixie/dazzdb=1.0+git20230919.414ad05-2 --2024-05-03 01:23:01-- http://deb.debian.org/debian/pool/main/d/dazzdb/dazzdb_1.0%2bgit20230919.414ad05-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2295 (2.2K) [text/prs.lines.tag] Saving to: ‘dazzdb_1.0+git20230919.414ad05-2.dsc’ 0K .. 100% 282M=0s 2024-05-03 01:23:01 (282 MB/s) - ‘dazzdb_1.0+git20230919.414ad05-2.dsc’ saved [2295/2295] Fri May 3 01:23:01 UTC 2024 I: dazzdb_1.0+git20230919.414ad05-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dazzdb Binary: dazzdb Architecture: any Version: 1.0+git20230919.414ad05-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Pranav Ballaney , Étienne Mollier Homepage: https://github.com/thegenemyers/DAZZ_DB Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/dazzdb Vcs-Git: https://salsa.debian.org/med-team/dazzdb.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: dazzdb deb science optional arch=any Checksums-Sha1: 8a0a5e89cf210de1496f2507550c40d51aeb35d6 98856 dazzdb_1.0+git20230919.414ad05.orig.tar.xz 36f319e1acaa6c03ada7577208b5d1a14d9f4f33 6984 dazzdb_1.0+git20230919.414ad05-2.debian.tar.xz Checksums-Sha256: 72fa5d236c5e3e635187b6bb28f3cbea3533e8c67766ac0516caa698ff368e50 98856 dazzdb_1.0+git20230919.414ad05.orig.tar.xz dd8fea3c91f130d42f2a7bf903318ee2af29ebc2592269e60dc1ef227a5aa2a7 6984 dazzdb_1.0+git20230919.414ad05-2.debian.tar.xz Files: ce592f9926e1c757e0e6a76ba6d3a305 98856 dazzdb_1.0+git20230919.414ad05.orig.tar.xz 7db13e3e7d361ef11b4f30f614691869 6984 dazzdb_1.0+git20230919.414ad05-2.debian.tar.xz Dgit: 70f5175b1af790926332e5715bbde4def5d73c26 debian archive/debian/1.0+git20230919.414ad05-2 https://git.dgit.debian.org/dazzdb -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmX3NlEUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdo3bQ//WU/YUB3NpkjiAxwYrwWH+aE9ckV7 JwDsDSptg35nmuau8tbqgPAnXd4f8SP0eU1q3FD/yUvpfNSp+8j0dlSydd7nppV+ AnHxrRuWucsf9f4oVudPJjV/kcOvwuuL8V6+vQctiP31nCFR428b+hBszsK9uWLd rIUVCRMC5qD7HUU2favg8q6F6wqt+spjbwrja9PIvAJBUvl1L/TSEdnVl/n671aq stqqtbtP0zQnN5AXZfdFvDen7cXdSe5Qve9/GmccBwSo82iOC5gLa87scAqapOeQ 8Unxs8HOejVMEVEsopwQQYoNuxzDvS7VKGZmf3usuy8SfTMQKk3wEv4mvLqA02Dn 5iwPNbHdJquHqxGGgMzEJPeT2tEXj1DgSEREMYHIW9W98PV8xRzrZkgJv0TC/l7a 2bSngH5/G4E2MpyP2Cut9e37eDO40NeXEENuO5uEdbiAcwkDtoZHSiNOMj2x6EJ+ rBsQ8QkxasVDmFZlfHUqmn2RWrFPw+XROqYFadJrzqdMYc1klt2Pr5kVg4rUpD2D /HeNrwINLn+m/WV0BEjTG+77RDYapxVpjaQwmC07R5o9L4iN15Hs8ovBtKG1LVh8 4XAuKjzQCavn2OyEJjBWxjGlvHeSkCb44qwsJzGO+yMoY5Q3dZSXNp1H5ztbflD3 oicCbD6J7k7xaIk= =18RL -----END PGP SIGNATURE----- Fri May 3 01:23:01 UTC 2024 I: Checking whether the package is not for us Fri May 3 01:23:01 UTC 2024 I: Starting 1st build on remote node virt64c-armhf-rb.debian.net. Fri May 3 01:23:01 UTC 2024 I: Preparing to do remote build '1' on virt64c-armhf-rb.debian.net. Fri May 3 01:25:41 UTC 2024 I: Deleting $TMPDIR on virt64c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu May 2 13:23:07 -12 2024 I: pbuilder-time-stamp: 1714699387 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dazzdb_1.0+git20230919.414ad05-2.dsc] I: copying [./dazzdb_1.0+git20230919.414ad05.orig.tar.xz] I: copying [./dazzdb_1.0+git20230919.414ad05-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Mar 17 18:28:33 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dazzdb_1.0+git20230919.414ad05-2.dsc: no acceptable signature found dpkg-source: info: extracting dazzdb in dazzdb-1.0+git20230919.414ad05 dpkg-source: info: unpacking dazzdb_1.0+git20230919.414ad05.orig.tar.xz dpkg-source: info: unpacking dazzdb_1.0+git20230919.414ad05-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying append-cflags.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying destdir.patch dpkg-source: info: applying use-after-free.patch dpkg-source: info: applying fix-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/30435/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='43eb7ac59720458392e0b7277303abcb' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='30435' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HKVuEHDb/pbuilderrc_yT7Q --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HKVuEHDb/b1 --logfile b1/build.log dazzdb_1.0+git20230919.414ad05-2.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64c 6.1.0-20-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 1 11:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/30435/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 19.3 MB of archives. After unpacking 70.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-3 [1088 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.0-3 [1367 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1 [904 kB] Fetched 19.3 MB in 0s (47.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-3_armhf.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40-8_armhf.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.0-3_armhf.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../22-libelf1t64_0.191-1+b1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.3+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../30-zlib1g-dev_1%3a1.3.dfsg-3.1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.3.dfsg-3.1) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg-3.1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.37-18) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dazzdb-1.0+git20230919.414ad05/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dazzdb_1.0+git20230919.414ad05-2_source.changes dpkg-buildpackage: info: source package dazzdb dpkg-buildpackage: info: source version 1.0+git20230919.414ad05-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE rm -fr *.dSYM rm -f dazz.db.tar.gz make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DB.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DB2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -Wl,-z,now quiva2DB.c DB.c DB.h QV.c QV.h -lm -lz -o quiva2DB In file included from /usr/include/stdio.h:906, from fasta2DB.c:24: In function 'fprintf', inlined from 'main' at fasta2DB.c:438:15: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:79:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DB.c: In function 'main': fasta2DB.c:363:29: note: 'fname' was declared here 363 | char *path, *core, *fname; | ^~~~~ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now simulator.c DB.c DB.h QV.c QV.h -lm -lz -o simulator cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM In file included from /usr/include/stdio.h:906, from fasta2DAM.c:24: In function 'fprintf', inlined from 'main' at fasta2DAM.c:400:21: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:79:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DAM.c: In function 'main': fasta2DAM.c:350:29: note: 'fname' was declared here 350 | char *path, *core, *fname; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow arrow2DB.c: In function 'main': arrow2DB.c:409:32: warning: 'rlen' may be used uninitialized [-Wmaybe-uninitialized] 409 | find = index(read+(rlen+1),' '); | ^ arrow2DB.c:209:26: note: 'rlen' was declared here 209 | int rmax, rlen, eof; | ^~~~ In file included from /usr/include/stdio.h:906, from arrow2DB.c:16: In function 'fprintf', inlined from 'main' at arrow2DB.c:424:19: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:79:10: warning: 'cline' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arrow2DB.c: In function 'main': arrow2DB.c:212:33: note: 'cline' was declared here 212 | int first, last, cline; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20230919.414ad05=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); | ^ QV.c: In function 'Huffman': QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ ONElib.c: In function 'readBuf': ONElib.c:617:40: warning: comparison is always false due to limited range of data type [-Wtype-limits] 617 | if (isspace(x) || x == '\0' || x == EOF) | ^~ ONElib.c: In function 'readString': ONElib.c:665:32: warning: comparison is always false due to limited range of data type [-Wtype-limits] 665 | if (*cp == '\n' || *cp == EOF) | ^~ ONElib.c: In function 'readFlush': ONElib.c:696:11: warning: comparison is always false due to limited range of data type [-Wtype-limits] 696 | if (x == EOF) | ^~ ONElib.c: In function 'writeHeader': ONElib.c:1892:24: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1892 | fprintf (vf->f, "1 %lu %s %d %d", strlen(vf->fileType), vf->fileType, MAJOR, MINOR); | ~~^ ~~~~~~~~~~~~~~~~~~~~ | | | | | size_t {aka unsigned int} | long unsigned int | %u ONElib.c:1895:30: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1895 | { fprintf (vf->f, "\n2 %lu %s", strlen(vf->subType), vf->subType); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | | size_t {aka unsigned int} | long unsigned int | %u ONElib.c:1904:36: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1904 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s", | ~~^ | | | long unsigned int | %u 1905 | strlen(p->program), p->program, strlen(p->version), p->version, | ~~~~~~~~~~~~~~~~~~ | | | size_t {aka unsigned int} ONElib.c:1904:43: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1904 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s", | ~~^ | | | long unsigned int | %u 1905 | strlen(p->program), p->program, strlen(p->version), p->version, | ~~~~~~~~~~~~~~~~~~ | | | size_t {aka unsigned int} ONElib.c:1904:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1904 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s", | ~~^ | | | long unsigned int | %u 1905 | strlen(p->program), p->program, strlen(p->version), p->version, 1906 | strlen(p->command), p->command, strlen(p->date), p->date); | ~~~~~~~~~~~~~~~~~~ | | | size_t {aka unsigned int} ONElib.c:1904:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 9 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1904 | { fprintf (vf->f, "\n! 4 %lu %s %lu %s %lu %s %lu %s", | ~~^ | | | long unsigned int | %u 1905 | strlen(p->program), p->program, strlen(p->version), p->version, 1906 | strlen(p->command), p->command, strlen(p->date), p->date); | ~~~~~~~~~~~~~~~ | | | size_t {aka unsigned int} ONElib.c:1918:34: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1918 | { fprintf (vf->f, "\n< %lu %s %" PRId64 "", strlen(r->filename), r->filename, r->count); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u ONElib.c:1925:34: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1925 | { fprintf (vf->f, "\n> %lu %s", strlen(r->filename), r->filename); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | | size_t {aka unsigned int} | long unsigned int | %u ONElib.c: In function 'intGet': ONElib.c:3489:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 3489 | switch (u[0] & 0x07) | ^~~~~~ ONElib.c:3500:5: note: here 3500 | case 4: | ^~~~ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7: ONElib.c:3504:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3504 | case 1: *pval = *(I64*)(u+1) | 0xffffffffffff0000 ; return 3 ; | ^~~~~~~~~~~~ ONElib.c: In function 'ltfRead': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7: ONElib.c:3505:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3505 | case 2: *pval = *(I64*)(u+1) | 0xffffffffff000000 ; return 4 ; | ^~~~~~~~~~~~ ONElib.c: In function 'ltfRead': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7: ONElib.c:3506:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3506 | case 3: *pval = *(I64*)(u+1) | 0xffffffff00000000 ; return 5 ; | ^~~~~~~~~~~~ ONElib.c: In function 'ltfRead': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7: ONElib.c:3507:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3507 | case 4: *pval = *(I64*)(u+1) | 0xffffff0000000000 ; return 6 ; | ^~~~~~~~~~~~ ONElib.c: In function 'ltfRead': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7: ONElib.c:3508:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3508 | case 5: *pval = *(I64*)(u+1) | 0xffff000000000000 ; return 7 ; | ^~~~~~~~~~~~ ONElib.c: In function 'ltfRead': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7: ONElib.c:3509:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3509 | case 6: *pval = *(I64*)(u+1) | 0xff00000000000000 ; return 8 ; | ^~~~~~~~~~~~ ONElib.c: In function 'ltfRead': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7: ONElib.c:3510:23: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3510 | case 7: *pval = *(I64*)(u+1) ; return 9 ; | ~~~~~~^~~~~~~~~~~~~~ ONElib.c: In function 'ltfRead': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7, inlined from 'readCompressedFields' at ONElib.c:897:15, inlined from 'oneReadLine' at ONElib.c:1040:2: ONElib.c:3504:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3504 | case 1: *pval = *(I64*)(u+1) | 0xffffffffffff0000 ; return 3 ; | ^~~~~~~~~~~~ ONElib.c: In function 'oneReadLine': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7, inlined from 'readCompressedFields' at ONElib.c:897:15, inlined from 'oneReadLine' at ONElib.c:1040:2: ONElib.c:3505:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3505 | case 2: *pval = *(I64*)(u+1) | 0xffffffffff000000 ; return 4 ; | ^~~~~~~~~~~~ ONElib.c: In function 'oneReadLine': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7, inlined from 'readCompressedFields' at ONElib.c:897:15, inlined from 'oneReadLine' at ONElib.c:1040:2: ONElib.c:3506:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3506 | case 3: *pval = *(I64*)(u+1) | 0xffffffff00000000 ; return 5 ; | ^~~~~~~~~~~~ ONElib.c: In function 'oneReadLine': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7, inlined from 'readCompressedFields' at ONElib.c:897:15, inlined from 'oneReadLine' at ONElib.c:1040:2: ONElib.c:3507:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3507 | case 4: *pval = *(I64*)(u+1) | 0xffffff0000000000 ; return 6 ; | ^~~~~~~~~~~~ ONElib.c: In function 'oneReadLine': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7, inlined from 'readCompressedFields' at ONElib.c:897:15, inlined from 'oneReadLine' at ONElib.c:1040:2: ONElib.c:3508:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3508 | case 5: *pval = *(I64*)(u+1) | 0xffff000000000000 ; return 7 ; | ^~~~~~~~~~~~ ONElib.c: In function 'oneReadLine': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7, inlined from 'readCompressedFields' at ONElib.c:897:15, inlined from 'oneReadLine' at ONElib.c:1040:2: ONElib.c:3509:25: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3509 | case 6: *pval = *(I64*)(u+1) | 0xff00000000000000 ; return 8 ; | ^~~~~~~~~~~~ ONElib.c: In function 'oneReadLine': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ In function 'intGet', inlined from 'ltfRead' at ONElib.c:3549:7, inlined from 'readCompressedFields' at ONElib.c:897:15, inlined from 'oneReadLine' at ONElib.c:1040:2: ONElib.c:3510:23: warning: 'u' may be used uninitialized [-Wmaybe-uninitialized] 3510 | case 7: *pval = *(I64*)(u+1) ; return 9 ; | ~~~~~~^~~~~~~~~~~~~~ ONElib.c: In function 'oneReadLine': ONElib.c:3544:17: note: 'u' declared here 3544 | unsigned char u[16] ; | ^ make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' dh_auto_install make -j3 install DESTDIR=/build/reproducible-path/dazzdb-1.0\+git20230919.414ad05/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' install -d /build/reproducible-path/dazzdb-1.0+git20230919.414ad05/debian/dazzdb/usr/bin install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE /build/reproducible-path/dazzdb-1.0+git20230919.414ad05/debian/dazzdb/usr/bin make[2]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' cd /build/reproducible-path/dazzdb-1.0+git20230919.414ad05/debian/dazzdb/usr/bin && mv simulator dsimulator mkdir -p /build/reproducible-path/dazzdb-1.0+git20230919.414ad05/debian/dazzdb/usr/share/man/man1 for command in /build/reproducible-path/dazzdb-1.0+git20230919.414ad05/debian/dazzdb/usr/bin/*; \ do \ ln -s dazzdb.1 \ /build/reproducible-path/dazzdb-1.0+git20230919.414ad05/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \ done make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20230919.414ad05' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20230919.414ad05-2_armhf.deb'. dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+git20230919.414ad05-2_armhf.deb'. dpkg-genbuildinfo --build=binary -O../dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo dpkg-genchanges --build=binary -O../dazzdb_1.0+git20230919.414ad05-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/30435 and its subdirectories I: Current time: Thu May 2 13:25:26 -12 2024 I: pbuilder-time-stamp: 1714699526 Fri May 3 01:25:44 UTC 2024 I: 1st build successful. Starting 2nd build on remote node cbxi4a-armhf-rb.debian.net. Fri May 3 01:25:44 UTC 2024 I: Preparing to do remote build '2' on cbxi4a-armhf-rb.debian.net. Fri May 3 01:33:12 UTC 2024 I: Deleting $TMPDIR on cbxi4a-armhf-rb.debian.net. Fri May 3 01:33:15 UTC 2024 I: dazzdb_1.0+git20230919.414ad05-2_armhf.changes: Format: 1.8 Date: Sun, 17 Mar 2024 19:23:21 +0100 Source: dazzdb Binary: dazzdb dazzdb-dbgsym Architecture: armhf Version: 1.0+git20230919.414ad05-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: dazzdb - manage nucleotide sequencing read data Closes: 1066663 Changes: dazzdb (1.0+git20230919.414ad05-2) unstable; urgency=medium . * fix-declaration.patch: new: fix build failure. The patch appends the missing declarations for vasprintf(3). (Closes: #1066663) * d/control: add myself to uploaders. Checksums-Sha1: d5feb46c033ded217b7e54e2cc7b964c896e05e8 1706736 dazzdb-dbgsym_1.0+git20230919.414ad05-2_armhf.deb 32fddfd74587322ed237121d967853ccc4b87896 5116 dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo a7abf018218ac27122ab29a2dcb68e9e7667d9b0 199620 dazzdb_1.0+git20230919.414ad05-2_armhf.deb Checksums-Sha256: 1da7c65672600b859393744a5929953c6fb89cbd528bab41b33e1fbbe6dd2848 1706736 dazzdb-dbgsym_1.0+git20230919.414ad05-2_armhf.deb ff8d37a1178eb0895bdab8f90a9eb6e8beb96b0b416b525654ce135f2cb78e62 5116 dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo 2a7e13c3150d6036fda613a74d8844c8c58af52030dcd1c9ce5e3572175e7352 199620 dazzdb_1.0+git20230919.414ad05-2_armhf.deb Files: 021fba6f2345da6869a00086bb300d58 1706736 debug optional dazzdb-dbgsym_1.0+git20230919.414ad05-2_armhf.deb ba310b71f992e48bf1553198384754af 5116 science optional dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo e94b831ead35b2f011ad0eb706b9a11e 199620 science optional dazzdb_1.0+git20230919.414ad05-2_armhf.deb Fri May 3 01:33:16 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_19-2934.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.HKVuEHDb/dazzdb_1.0+git20230919.414ad05-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.HKVuEHDb/dazzdb_1.0+git20230919.414ad05-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.HKVuEHDb/dazzdb_1.0+git20230919.414ad05-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.HKVuEHDb/b1/dazzdb_1.0+git20230919.414ad05-2_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.HKVuEHDb/b2/dazzdb_1.0+git20230919.414ad05-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.410s) 0.410s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.037s) 0.037s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 845ms CPU time consumed: 833ms Fri May 3 01:33:17 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Fri May 3 01:33:17 UTC 2024 I: dazzdb from trixie built successfully and reproducibly on armhf. Fri May 3 01:33:19 UTC 2024 I: Submitting .buildinfo files to external archives: Fri May 3 01:33:20 UTC 2024 I: Submitting 8.0K b1/dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo.asc Fri May 3 01:33:22 UTC 2024 I: Submitting 8.0K b2/dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo.asc Fri May 3 01:33:23 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri May 3 01:33:23 UTC 2024 I: Done submitting .buildinfo files. Fri May 3 01:33:23 UTC 2024 I: Removing signed dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo.asc files: removed './b1/dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo.asc' removed './b2/dazzdb_1.0+git20230919.414ad05-2_armhf.buildinfo.asc'