Wed May 8 04:00:39 UTC 2024 I: starting to build libbio-eutilities-perl/trixie/armhf on jenkins on '2024-05-08 04:00' Wed May 8 04:00:39 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_34/6515/console.log Wed May 8 04:00:39 UTC 2024 I: Downloading source for trixie/libbio-eutilities-perl=1.77-2 --2024-05-08 04:00:39-- http://deb.debian.org/debian/pool/main/libb/libbio-eutilities-perl/libbio-eutilities-perl_1.77-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2364 (2.3K) [text/prs.lines.tag] Saving to: ‘libbio-eutilities-perl_1.77-2.dsc’ 0K .. 100% 266M=0s 2024-05-08 04:00:40 (266 MB/s) - ‘libbio-eutilities-perl_1.77-2.dsc’ saved [2364/2364] Wed May 8 04:00:40 UTC 2024 I: libbio-eutilities-perl_1.77-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbio-eutilities-perl Binary: libbio-eutilities-perl Architecture: all Version: 1.77-2 Maintainer: Debian Perl Group Uploaders: Carnë Draug Homepage: https://metacpan.org/release/Bio-EUtilities Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/perl-team/modules/packages/libbio-eutilities-perl Vcs-Git: https://salsa.debian.org/perl-team/modules/packages/libbio-eutilities-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 13) Build-Depends-Indep: libbio-asn1-entrezgene-perl , libbio-perl-perl , libhttp-message-perl , libtext-csv-perl , liburi-perl , libwww-perl , libxml-simple-perl , perl Package-List: libbio-eutilities-perl deb perl optional arch=all Checksums-Sha1: ee2a4960ae19eb212b9c9d8f81f149c80a9f9b65 98643 libbio-eutilities-perl_1.77.orig.tar.gz 93110b21a4a4d05f3faf89e3cdfaffad45ed6a0e 5356 libbio-eutilities-perl_1.77-2.debian.tar.xz Checksums-Sha256: 4d018c8cbda73c3d71487165261a3dfc4e823f8e22747497f6a586d5ad6f737f 98643 libbio-eutilities-perl_1.77.orig.tar.gz 6c611cf1f466f4e54266a3fe2f6852eeba3aa42973f0ec914625d719e7eb711b 5356 libbio-eutilities-perl_1.77-2.debian.tar.xz Files: b4f862d0ec104628bce8e280d767adf0 98643 libbio-eutilities-perl_1.77.orig.tar.gz 7f8a558f55cf02ce513d44f2211af53b 5356 libbio-eutilities-perl_1.77-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEsjhixBXWVlpOhsvXV5wWDUyeI+gFAmNLcvcACgkQV5wWDUye I+hx2g//ekO43cGa5ovp54hnEdgtsIHJ8OLZhh48XswLD5FMtd08XU5FQCL09TfA dBL5VFzmr8yYsFA15bpO2V2Wp65yLK0E8/kJjDkLFtVit8DrLDNau0zMVuW5wZgP YNQrfkcSF98/firWCmg0ybMDRkHdU/m4ka2w7FeJ4qcr0PvrTGg1emAQvabxaQJo 59dBqHx1awJEyD0bsGn9OPLp5N6+RjUnF+Uv1zvi4b9RAuAI2h8x0W7q5//TGnZ5 +UnuP8gpHHh9OJckBWM/hGjyqZRa0RMCnq94gCnWvIM1hR9UgQfN9vK3Q2LjISdu VYyLPkCvcSe9719+cyEs4uxnihD74s8r4skCg54dB5trk6APwdh9C44MsWoncRI8 lGNmuc//87ROIr557WfOWtCWv3Zp05xEycU/xUSiVoqnQzTKQ7MtgBShPSOu9Xi1 3oUwwwCuQrVssXksLHxJOv4e9sAjNxpk1DCcAzKFlPS2KlvHF/4AD23YDWC7/YNl DZ3TD20AB5XVIseKYF3J4HPSbHhF/+pKN7HJTfig1JV/4cAxmA8OnZCSBkZt8Eco M3fN4pGbhnkvY3Q/JLM5tyGajWTvnqT5pueVavPEWPdAdTdoYhhen2o2Gb0KgtaR 1ZtClDLhrZkyev6nr3P2cl6SsVwTIyt/TPhPemFfsn+qtdwzEt4= =XTsb -----END PGP SIGNATURE----- Wed May 8 04:00:40 UTC 2024 I: Checking whether the package is not for us Wed May 8 04:00:40 UTC 2024 I: Starting 1st build on remote node virt32z-armhf-rb.debian.net. Wed May 8 04:00:40 UTC 2024 I: Preparing to do remote build '1' on virt32z-armhf-rb.debian.net. Wed May 8 04:01:55 UTC 2024 I: Deleting $TMPDIR on virt32z-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue May 7 16:00:46 -12 2024 I: pbuilder-time-stamp: 1715140846 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-eutilities-perl_1.77-2.dsc] I: copying [./libbio-eutilities-perl_1.77.orig.tar.gz] I: copying [./libbio-eutilities-perl_1.77-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Oct 16 02:56:55 2022 gpgv: using RSA key B23862C415D6565A4E86CBD7579C160D4C9E23E8 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-eutilities-perl_1.77-2.dsc: no acceptable signature found dpkg-source: info: extracting libbio-eutilities-perl in libbio-eutilities-perl-1.77 dpkg-source: info: unpacking libbio-eutilities-perl_1.77.orig.tar.gz dpkg-source: info: unpacking libbio-eutilities-perl_1.77-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying inline-DTDs-on-testsuite dpkg-source: info: applying autopkgtest-compile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/9836/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='20cb21ec525444c59fd861b5169ca3a0' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='9836' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.V2NB8sZB/pbuilderrc_wwm4 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.V2NB8sZB/b1 --logfile b1/build.log libbio-eutilities-perl_1.77-2.dsc' SUDO_GID='110' SUDO_UID='103' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32z 6.1.0-21-armmp-lpae #1 SMP Debian 6.1.90-1 (2024-05-03) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 7 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/9836/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libbio-asn1-entrezgene-perl, libbio-perl-perl, libhttp-message-perl, libtext-csv-perl, liburi-perl, libwww-perl, libxml-simple-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-asn1-entrezgene-perl; however: Package libbio-asn1-entrezgene-perl is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libhttp-message-perl; however: Package libhttp-message-perl is not installed. pbuilder-satisfydepends-dummy depends on libtext-csv-perl; however: Package libtext-csv-perl is not installed. pbuilder-satisfydepends-dummy depends on liburi-perl; however: Package liburi-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-simple-perl; however: Package libxml-simple-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbio-asn1-entrezgene-perl{a} libbio-cluster-perl{a} libbio-perl-perl{a} libbio-variation-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libelf1t64{a} libencode-locale-perl{a} libexpat1{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libsub-override-perl{a} libtext-csv-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml-libxml-perl{a} libxml-namespacesupport-perl{a} libxml-parser-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml-simple-perl{a} libxml-twig-perl{a} libxml-writer-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} ucf{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-perl-run-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libtext-csv-xs-perl libtext-iconv-perl libtie-ixhash-perl libxml-dom-xpath-perl libxml-libxslt-perl libxml-perl libxml-sax-expat-perl libxml-sax-writer-perl libxml-xpath-perl libxml-xpathengine-perl lynx perl-tk wget 0 packages upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 25.7 MB of archives. After unpacking 89.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.2.1-3 [1326 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf ucf all 3.0043+nmu1 [55.2 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 27 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libio-string-perl all 1.08-4 [12.1 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libdata-stag-perl all 0.14-3 [448 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf liburi-perl all 5.28-1 [98.6 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf libencode-locale-perl all 1.05-3 [12.9 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf libtimedate-perl all 2.3300-2 [39.3 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libhttp-date-perl all 6.06-1 [10.7 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libfile-listing-perl all 6.16-1 [12.4 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libhtml-parser-perl armhf 3.82-1 [95.6 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libhtml-tree-perl all 5.07-3 [211 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libclone-perl armhf 0.46-1+b2 [13.1 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libio-html-perl all 1.004-3 [16.2 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libhttp-message-perl all 6.45-1 [82.0 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf perl-openssl-defaults armhf 7+b2 [6708 B] Get: 54 http://deb.debian.org/debian trixie/main armhf libnet-ssleay-perl armhf 1.94-1+b1 [319 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libio-socket-ssl-perl all 2.085-1 [218 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libnet-http-perl all 6.23-1 [23.9 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libwww-perl all 6.77-1 [183 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libxml-parser-perl armhf 2.47-1+b2 [196 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf libxml-twig-perl all 1:3.52-3 [177 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libxml-writer-perl all 0.900-2 [26.8 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libbio-variation-perl all 1.7.5-3 [72.6 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf libxml-sax-base-perl all 1.09-3 [20.6 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libbio-cluster-perl all 1.7.3-6 [53.3 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf libbio-asn1-entrezgene-perl all 1.730-3 [46.3 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf libtext-csv-perl all 2.04-1 [112 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf libxml-libxml-perl armhf 2.0207+dfsg+really+2.0134-1+b4 [297 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libxml-simple-perl all 2.25-2 [69.8 kB] Fetched 25.7 MB in 0s (75.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.2.1-3_armhf.deb ... Unpacking openssl (3.2.1-3) ... 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Selecting previously unselected package libbio-asn1-entrezgene-perl. Preparing to unpack .../68-libbio-asn1-entrezgene-perl_1.730-3_all.deb ... Unpacking libbio-asn1-entrezgene-perl (1.730-3) ... Selecting previously unselected package libtext-csv-perl. Preparing to unpack .../69-libtext-csv-perl_2.04-1_all.deb ... Unpacking libtext-csv-perl (2.04-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../70-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b4_armhf.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b4) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../71-libxml-simple-perl_2.25-2_all.deb ... Unpacking libxml-simple-perl (2.25-2) ... Setting up libexpat1:armhf (2.6.2-1) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libclone-perl:armhf (0.46-1+b2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:armhf (7+b2) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libxml-writer-perl (0.900-2) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b2) ... Setting up libdata-stag-perl (0.14-3) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up openssl (3.2.1-3) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up liburi-perl (5.28-1) ... Setting up libtext-csv-perl (2.04-1) ... Setting up libnet-ssleay-perl:armhf (1.94-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.21-14+b1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtool (2.4.7-7) ... Setting up libnet-http-perl (6.23-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-4) ... Setting up libhtml-parser-perl:armhf (3.82-1) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.15.3) ... Setting up libxml-simple-perl (2.25-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libxml-parser-perl (2.47-1+b2) ... Setting up libxml-twig-perl (1:3.52-3) ... Setting up libbio-variation-perl (1.7.5-3) ... Setting up libbio-cluster-perl (1.7.3-6) ... Setting up libbio-asn1-entrezgene-perl (1.730-3) ... Processing triggers for libc-bin (2.38-7) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libbio-eutilities-perl-1.77/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-eutilities-perl_1.77-2_source.changes dpkg-buildpackage: info: source package libbio-eutilities-perl dpkg-buildpackage: info: source version 1.77-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Jelmer Vernooij dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-eutilities-perl-1.77=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-eutilities-perl-1.77=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::EUtilities Writing MYMETA.yml and MYMETA.json dh_auto_build make -j3 make[1]: Entering directory '/build/reproducible-path/libbio-eutilities-perl-1.77' cp lib/Bio/Tools/EUtilities/EUtilParameters.pm blib/lib/Bio/Tools/EUtilities/EUtilParameters.pm cp lib/Bio/Tools/EUtilities/Info/FieldInfo.pm blib/lib/Bio/Tools/EUtilities/Info/FieldInfo.pm cp lib/Bio/Tools/EUtilities/Summary/ItemContainerI.pm blib/lib/Bio/Tools/EUtilities/Summary/ItemContainerI.pm cp lib/Bio/Tools/EUtilities/Summary/Item.pm blib/lib/Bio/Tools/EUtilities/Summary/Item.pm cp lib/Bio/DB/EUtilities.pm blib/lib/Bio/DB/EUtilities.pm cp lib/Bio/Tools/EUtilities/History.pm blib/lib/Bio/Tools/EUtilities/History.pm cp lib/Bio/Tools/EUtilities/Info/LinkInfo.pm blib/lib/Bio/Tools/EUtilities/Info/LinkInfo.pm cp lib/Bio/Tools/EUtilities/Query.pm blib/lib/Bio/Tools/EUtilities/Query.pm cp lib/Bio/Tools/EUtilities/Summary.pm blib/lib/Bio/Tools/EUtilities/Summary.pm cp lib/Bio/Tools/EUtilities/EUtilDataI.pm blib/lib/Bio/Tools/EUtilities/EUtilDataI.pm cp lib/Bio/Tools/EUtilities/Query/GlobalQuery.pm blib/lib/Bio/Tools/EUtilities/Query/GlobalQuery.pm cp lib/Bio/EUtilities.pm blib/lib/Bio/EUtilities.pm cp lib/Bio/Tools/EUtilities/Info.pm blib/lib/Bio/Tools/EUtilities/Info.pm cp lib/Bio/Tools/EUtilities/Summary/DocSum.pm blib/lib/Bio/Tools/EUtilities/Summary/DocSum.pm cp lib/Bio/Tools/EUtilities/Link.pm blib/lib/Bio/Tools/EUtilities/Link.pm cp lib/Bio/Tools/EUtilities/Link/UrlLink.pm blib/lib/Bio/Tools/EUtilities/Link/UrlLink.pm cp lib/Bio/Tools/EUtilities.pm blib/lib/Bio/Tools/EUtilities.pm cp lib/Bio/Tools/EUtilities/HistoryI.pm blib/lib/Bio/Tools/EUtilities/HistoryI.pm cp lib/Bio/Tools/EUtilities/Link/LinkSet.pm blib/lib/Bio/Tools/EUtilities/Link/LinkSet.pm cp bin/bp_einfo blib/script/bp_einfo cp bin/bp_genbank_ref_extractor blib/script/bp_genbank_ref_extractor "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_einfo "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_genbank_ref_extractor Manifying 2 pod documents Manifying 19 pod documents make[1]: Leaving directory '/build/reproducible-path/libbio-eutilities-perl-1.77' dh_auto_test make -j3 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-eutilities-perl-1.77' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t .............. 1..21 ok 1 - Bio/DB/EUtilities.pm loaded ok ok 2 - Bio/EUtilities.pm loaded ok ok 3 - Bio/Tools/EUtilities.pm loaded ok ok 4 - Bio/Tools/EUtilities/EUtilDataI.pm loaded ok ok 5 - Bio/Tools/EUtilities/EUtilParameters.pm loaded ok ok 6 - Bio/Tools/EUtilities/History.pm loaded ok ok 7 - Bio/Tools/EUtilities/HistoryI.pm loaded ok ok 8 - Bio/Tools/EUtilities/Info.pm loaded ok ok 9 - Bio/Tools/EUtilities/Info/FieldInfo.pm loaded ok ok 10 - Bio/Tools/EUtilities/Info/LinkInfo.pm loaded ok ok 11 - Bio/Tools/EUtilities/Link.pm loaded ok ok 12 - Bio/Tools/EUtilities/Link/LinkSet.pm loaded ok ok 13 - Bio/Tools/EUtilities/Link/UrlLink.pm loaded ok ok 14 - Bio/Tools/EUtilities/Query.pm loaded ok ok 15 - Bio/Tools/EUtilities/Query/GlobalQuery.pm loaded ok ok 16 - Bio/Tools/EUtilities/Summary.pm loaded ok ok 17 - Bio/Tools/EUtilities/Summary/DocSum.pm loaded ok ok 18 - Bio/Tools/EUtilities/Summary/Item.pm loaded ok ok 19 - Bio/Tools/EUtilities/Summary/ItemContainerI.pm loaded ok ok 20 - bin/bp_einfo compiled ok ok 21 - bin/bp_genbank_ref_extractor compiled ok ok t/author-eol.t .............. skipped: these tests are for testing by the author t/author-mojibake.t ......... skipped: these tests are for testing by the author t/author-no-tabs.t .......... skipped: these tests are for testing by the author t/author-pod-syntax.t ....... skipped: these tests are for testing by the author t/egquery.t ................. 1..18 ok 1 - get_db ok 2 - get_database ok 3 - get_databases ok 4 - get_term ok 5 - get_count ok 6 - get_count ok 7 - get_count ok 8 - get_GlobalQueries ok 9 - get_term ok 10 - get_term ok 11 - get_term ok 12 - get_term ok 13 - get_term ok 14 - get_term ok 15 - get_term ok 16 - get_term ok 17 - get_term ok 18 - get_term ok t/einfo.t ................... 1..49 ok 1 - get_available_databases ok 2 - get_databases ok 3 - get_db ok 4 - get_record_count ok 5 - get_menu_name ok 6 - get_last_update ok 7 - get_description ok 8 - FieldInfo ok 9 - LinkInfo ok 10 - get_db ok 11 - get_dbs ok 12 - get_record_count ok 13 - get_menu_name ok 14 - get_last_update ok 15 - get_description ok 16 - FieldInfo ok 17 - get_term_count ok 18 - get_field_name ok 19 - get_field_code ok 20 - get_field_description ok 21 - is_date ok 22 - is_singletoken ok 23 - is_hierarchy ok 24 - is_hidden ok 25 - is_numerical ok 26 - get_term_count ok 27 - get_field_name ok 28 - get_field_code ok 29 - get_field_description ok 30 - is_date ok 31 - is_singletoken ok 32 - is_hierarchy ok 33 - is_hidden ok 34 - is_numerical ok 35 - LinkInfo ok 36 - get_dbto ok 37 - get_dbfrom ok 38 - get_link_name ok 39 - get_link_description ok 40 - get_priority ok 41 - get_html_tag ok 42 - get_url ok 43 - get_dbto ok 44 - get_dbfrom ok 45 - get_link_name ok 46 - get_link_description ok 47 - get_priority ok 48 - get_html_tag ok 49 - get_url ok t/elink_acheck.t ............ 1..128 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - get_ids ok 5 - uncorrelated LinkSets lump everything together ok 6 ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 8 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok 64 ok 65 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 66 ok 67 - get_ids ok 68 - get_ids ok 69 - correlated LinkSets separate ID data ok 70 ok 71 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 72 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 73 ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok 82 ok 83 ok 84 ok 85 ok 86 ok 87 ok 88 ok 89 ok 90 ok 91 ok 92 ok 93 ok 94 ok 95 ok 96 ok 97 ok 98 ok 99 ok 100 ok 101 ok 102 ok 103 ok 104 ok 105 ok 106 ok 107 ok 108 ok 109 ok 110 ok 111 ok 112 ok 113 ok 114 ok 115 ok 116 ok 117 ok 118 ok 119 ok 120 ok 121 ok 122 ok 123 ok 124 ok 125 ok 126 ok 127 ok 128 ok t/elink_lcheck.t ............ 1..62 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 33 ok 34 - get_ids ok 35 - correlated LinkSets separate ID data ok 36 ok 37 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 38 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok t/elink_llinks.t ............ 1..84 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 44 ok 45 - get_ids ok 46 - correlated LinkSets separate ID data ok 47 ok 48 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 49 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok 64 ok 65 ok 66 ok 67 ok 68 ok 69 ok 70 ok 71 ok 72 ok 73 ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok 82 ok 83 ok 84 ok t/elink_ncheck.t ............ 1..58 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 29 ok 30 - get_ids ok 31 - correlated LinkSets separate ID data ok 32 ok 33 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 34 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok t/elink_neighbor.t .......... 1..61 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 33 ok 34 - get_ids ok 35 - correlated LinkSets separate ID data ok 36 ok 37 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 38 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok t/elink_neighbor_history.t .. 1..63 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::HistoryI' ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 34 ok 35 - get_ids ok 36 - correlated LinkSets separate ID data ok 37 ok 38 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 39 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 40 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::HistoryI' ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok t/elink_scores.t ............ 1..56 ok 1 - An object of class 'Bio::Tools::EUtilities::Link' isa 'Bio::Tools::EUtilities::Link' ok 2 ok 3 - get_ids ok 4 - uncorrelated LinkSets lump everything together ok 5 ok 6 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - An object of class 'Bio::Tools::EUtilities::Link::LinkSet' isa 'Bio::Tools::EUtilities::Link::LinkSet' ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok t/epost.t ................... 1..15 ok 1 - An object of class 'Bio::Tools::EUtilities::Query' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 2 - An object of class 'Bio::Tools::EUtilities::Query' isa 'Bio::Tools::EUtilities::Query' ok 3 - eutil ok 4 - datatype ok 5 - An object of class 'Bio::Tools::EUtilities::History' isa 'Bio::Tools::EUtilities::HistoryI' ok 6 - An object of class 'Bio::Tools::EUtilities::History' isa 'Bio::Tools::EUtilities::EUtilDataI' ok 7 - eutil ok 8 - eutil ok 9 - get_webenv ok 10 - get_query_key ok 11 - history ok 12 - get_database ok 13 - get_ids ok 14 - get_database ok 15 - get_ids ok t/esearch.t ................. 1..31 ok 1 - get_count ok 2 ok 3 - get_ids ok 4 - get_retstart ok 5 - get_retmax ok 6 - get_translation_from ok 7 - get_translation_to ok 8 - get_db ok 9 - get_database ok 10 - get_term ok 11 - get_db ok 12 - get_database ok 13 - get_term ok 14 - get_corrected_query ok 15 - get_replaced_terms ok 16 - get_count ok 17 - An object of class 'Bio::Tools::EUtilities::History' isa 'Bio::Tools::EUtilities::HistoryI' ok 18 - get_webenv ok 19 - get_query_key ok 20 - history ok 21 - get_ids ok 22 - get_retstart ok 23 - get_retmax ok 24 - get_translation_from ok 25 - get_translation_to ok 26 - get_db ok 27 - get_database ok 28 - get_term ok 29 - get_corrected_query ok 30 - get_replaced_terms ok 31 - get_GlobalQueries ok t/espell.t .................. 1..20 ok 1 - get_db ok 2 - get_dbs ok 3 - get_database ok 4 - get_databases ok 5 - get_term ok 6 - get_corrected_query ok 7 - get_replaced_terms ok 8 - get_replaced_terms ok 9 - get_count ok 10 ok 11 - get_ids ok 12 - get_retstart ok 13 - get_retmax ok 14 - get_translation_from ok 15 - get_translation_to ok 16 - get_db ok 17 - get_dbs ok 18 - get_database ok 19 - get_databases ok 20 - get_term ok t/esummary.t ................ 1..81 ok 1 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 2 ok 3 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 4 ok 5 - get_ids ok 6 ok 7 - An object of class 'Bio::Tools::EUtilities::Summary::DocSum' isa 'Bio::Tools::EUtilities::Summary::DocSum' ok 8 ok 9 ok 10 ok 11 - An object of class 'Bio::Tools::EUtilities::Summary::Item' isa 'Bio::Tools::EUtilities::Summary::Item' ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 - An object of class 'Bio::Tools::EUtilities::Summary::Item' isa 'Bio::Tools::EUtilities::Summary::Item' ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 51 ok 52 - An object of class 'Bio::Tools::EUtilities::Summary' isa 'Bio::Tools::EUtilities::Summary' ok 53 ok 54 - get_ids ok 55 ok 56 - An object of class 'Bio::Tools::EUtilities::Summary::DocSum' isa 'Bio::Tools::EUtilities::Summary::DocSum' ok 57 ok 58 ok 59 ok 60 ok 61 - An object of class 'Bio::Tools::EUtilities::Summary::Item' isa 'Bio::Tools::EUtilities::Summary::Item' ok 62 ok 63 ok 64 ok 65 ok 66 ok 67 ok 68 ok 69 ok 70 ok 71 ok 72 ok 73 ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok t/EUtilParameters.t ......... 1..12 ok 1 ok 2 - An object of class 'HTTP::Request' isa 'HTTP::Request' ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 - available_parameters ok 10 - available_parameters ok 11 - get_parameters ok 12 - get_parameters ok t/release-EUtilities.t ...... skipped: these tests are for release candidate testing All tests successful. Files=20, Tests=759, 8 wallclock secs ( 0.15 usr 0.14 sys + 6.37 cusr 1.18 csys = 7.84 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-eutilities-perl-1.77' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbio-eutilities-perl/ make -j3 install DESTDIR=/build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-eutilities-perl-1.77' Manifying 2 pod documents Manifying 19 pod documents Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/EUtilities.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/HistoryI.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Query.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/History.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/EUtilParameters.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Link.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Info.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/EUtilDataI.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Info/FieldInfo.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Info/LinkInfo.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Link/UrlLink.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Link/LinkSet.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Query/GlobalQuery.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary/DocSum.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary/ItemContainerI.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/Tools/EUtilities/Summary/Item.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/perl5/Bio/DB/EUtilities.pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man1/bp_genbank_ref_extractor.1p Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man1/bp_einfo.1p Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::HistoryI.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Info::FieldInfo.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Link::LinkSet.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Link::UrlLink.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Query.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::EUtilities.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::DB::EUtilities.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Link.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Query::GlobalQuery.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::EUtilParameters.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary::ItemContainerI.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Info.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Info::LinkInfo.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::History.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary::DocSum.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary::Item.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::Summary.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/share/man/man3/Bio::Tools::EUtilities::EUtilDataI.3pm Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/bin/bp_genbank_ref_extractor Installing /build/reproducible-path/libbio-eutilities-perl-1.77/debian/libbio-eutilities-perl/usr/bin/bp_einfo make[1]: Leaving directory '/build/reproducible-path/libbio-eutilities-perl-1.77' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-eutilities-perl' in '../libbio-eutilities-perl_1.77-2_all.deb'. dpkg-genbuildinfo --build=binary -O../libbio-eutilities-perl_1.77-2_armhf.buildinfo dpkg-genchanges --build=binary -O../libbio-eutilities-perl_1.77-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/9836 and its subdirectories I: Current time: Tue May 7 16:01:44 -12 2024 I: pbuilder-time-stamp: 1715140904 Wed May 8 04:01:59 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64a-armhf-rb.debian.net. Wed May 8 04:01:59 UTC 2024 I: Preparing to do remote build '2' on virt64a-armhf-rb.debian.net. Wed May 8 04:11:01 UTC 2024 I: Deleting $TMPDIR on virt64a-armhf-rb.debian.net. Wed May 8 04:11:03 UTC 2024 I: libbio-eutilities-perl_1.77-2_armhf.changes: Format: 1.8 Date: Sun, 16 Oct 2022 03:56:15 +0100 Source: libbio-eutilities-perl Binary: libbio-eutilities-perl Architecture: all Version: 1.77-2 Distribution: unstable Urgency: medium Maintainer: Debian Perl Group Changed-By: Jelmer Vernooij Description: libbio-eutilities-perl - BioPerl interface to the Entrez Programming Utilities (E-utilitie Changes: libbio-eutilities-perl (1.77-2) unstable; urgency=medium . [ Debian Janitor ] * Bump debhelper from old 12 to 13. * Update standards version to 4.5.1, no changes needed. Checksums-Sha1: 3787d81d34bd956503bb47ef0f2a32362a2a27cc 118624 libbio-eutilities-perl_1.77-2_all.deb 1e2e8b7707ab8ed68e3ed15d3eab4cf7691d27a5 6118 libbio-eutilities-perl_1.77-2_armhf.buildinfo Checksums-Sha256: 6be517f983044b3decd4b087b12cd16c3b69fa15f1d0629c2a402783ee2196ad 118624 libbio-eutilities-perl_1.77-2_all.deb 9b23c514dacb76412832d02843f110070d12e81deb5bcaa5cb93860871899bfb 6118 libbio-eutilities-perl_1.77-2_armhf.buildinfo Files: 93cc97bf75b84da91df83efa89e212a7 118624 perl optional libbio-eutilities-perl_1.77-2_all.deb 6ee1ec158cc5b0c52b93f18a8a0139f2 6118 perl optional libbio-eutilities-perl_1.77-2_armhf.buildinfo Wed May 8 04:11:05 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_34-6515.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.V2NB8sZB/libbio-eutilities-perl_1.77-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.V2NB8sZB/libbio-eutilities-perl_1.77-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.V2NB8sZB/libbio-eutilities-perl_1.77-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.V2NB8sZB/b1/libbio-eutilities-perl_1.77-2_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.V2NB8sZB/b2/libbio-eutilities-perl_1.77-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.492s) 0.492s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.020s) 0.020s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 915ms CPU time consumed: 913ms Wed May 8 04:11:06 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Wed May 8 04:11:06 UTC 2024 I: libbio-eutilities-perl from trixie built successfully and reproducibly on armhf. Wed May 8 04:11:07 UTC 2024 I: Submitting .buildinfo files to external archives: Wed May 8 04:11:07 UTC 2024 I: Submitting 8.0K b1/libbio-eutilities-perl_1.77-2_armhf.buildinfo.asc Wed May 8 04:11:08 UTC 2024 I: Submitting 8.0K b2/libbio-eutilities-perl_1.77-2_armhf.buildinfo.asc Wed May 8 04:11:09 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed May 8 04:11:09 UTC 2024 I: Done submitting .buildinfo files. Wed May 8 04:11:09 UTC 2024 I: Removing signed libbio-eutilities-perl_1.77-2_armhf.buildinfo.asc files: removed './b1/libbio-eutilities-perl_1.77-2_armhf.buildinfo.asc' removed './b2/libbio-eutilities-perl_1.77-2_armhf.buildinfo.asc'