Fri Apr 5 12:43:47 UTC 2024 I: starting to build elph/trixie/i386 on jenkins on '2024-04-05 12:43' Fri Apr 5 12:43:47 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_1/21525/console.log Fri Apr 5 12:43:47 UTC 2024 I: Downloading source for trixie/elph=1.0.1-5 --2024-04-05 12:43:47-- http://deb.debian.org/debian/pool/main/e/elph/elph_1.0.1-5.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1960 (1.9K) [text/prs.lines.tag] Saving to: ‘elph_1.0.1-5.dsc’ 0K . 100% 21.3M=0s 2024-04-05 12:43:47 (21.3 MB/s) - ‘elph_1.0.1-5.dsc’ saved [1960/1960] Fri Apr 5 12:43:47 UTC 2024 I: elph_1.0.1-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: elph Binary: elph Architecture: any Version: 1.0.1-5 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://www.cbcb.umd.edu/software/ELPH/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/elph Vcs-Git: https://salsa.debian.org/med-team/elph.git Testsuite: autopkgtest Testsuite-Triggers: igor Build-Depends: debhelper-compat (= 13), help2man Package-List: elph deb science optional arch=any Checksums-Sha1: 892ef4811063ac95c11e41eae96c419f7ddafede 37188 elph_1.0.1.orig.tar.xz e55bdb5a9e2e8e381c1adb1826c4cfc54b8cd3bc 4000 elph_1.0.1-5.debian.tar.xz Checksums-Sha256: fd538b86759b9b49e20e415039b130d94e4fed5d7e4bbfa0b2649f650eb806e6 37188 elph_1.0.1.orig.tar.xz 57f74c77519812947a87569ddf262fd3f9a1e3a30f550db501d07958c85d7622 4000 elph_1.0.1-5.debian.tar.xz Files: f77c9c4f47ae4b5cd69c9d78d673ffc4 37188 elph_1.0.1.orig.tar.xz 58e0cfe01d8e39f83d292de9512c41dd 4000 elph_1.0.1-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl77X44UHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafEsKBAAgYWT1/UaZstj1n0yr7s8GtNEaCJM pNTZlgURpETZGaHuo9M1U5t73fAJGoDy5brFQI5GfeRA6IONPFmZX5wS0CJTAvjh m02LYEtX9rukaOoGUdFD6CVaWHBOKqD7cfsNVCPkUfFzM8D9PtjSzPqWQeV8m/R/ 7uhFBWDSzQIw0EKb0UDSIB+gUuqEm5xp7o/LH0PVDWnT0rxs3TYAamjT3CT1Vmqo asOKtjtyJ75gvQNnVX44QamL9vQLpP/d6ha1nzc/RYxVHwD5+Vo4kUICmtHrTUBa ksiK2waU67TFLACwWHkTN9zunZOTOiG3k2k/UFsqoNkPNp9eOu/zBa2MDhQnVMN6 VGHq76m6Hyqx//AGzuX/+qNffueJbG4y8yEuLOVfZkTwEkRKUaFg1u7uCXp2HVth KX9+O+Z44AzNAgVnuw5ABoXAEgsnK75RcZmcXcXC/qkPV2u67SbVzGg29VAKaOpD T+lIiAsJC6qMeYwFBIjFedcwMplm3ox9Kz31vKCV4J9PLsoKmYKFQUrYYo6tDSAc Olr8DLEY2xrP3uhBONsgwf/V2sdTrv3TZw+hIqqFqAW7cZnn+fmg16qEzWJtVrz+ AXl4V4PqLqCzoF0VyQKuWFis6ctjuTIKZ30tKN0plu6wJvJUUanGfaJ67ZUoRKSz et/EOQ1rOgy36TE= =FVa+ -----END PGP SIGNATURE----- Fri Apr 5 12:43:47 UTC 2024 I: Checking whether the package is not for us Fri Apr 5 12:43:47 UTC 2024 I: Starting 1st build on remote node ionos2-i386.debian.net. Fri Apr 5 12:43:47 UTC 2024 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Fri Apr 5 12:44:26 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Apr 5 00:43:49 -12 2024 I: pbuilder-time-stamp: 1712321029 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [elph_1.0.1-5.dsc] I: copying [./elph_1.0.1.orig.tar.xz] I: copying [./elph_1.0.1-5.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jun 30 15:51:42 2020 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./elph_1.0.1-5.dsc: no acceptable signature found dpkg-source: info: extracting elph in elph-1.0.1 dpkg-source: info: unpacking elph_1.0.1.orig.tar.xz dpkg-source: info: unpacking elph_1.0.1-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying toplevelmakefile.patch dpkg-source: info: applying reproduciblebuild.patch dpkg-source: info: applying clang.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/58739/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='b74045e82bfd4bf596ed5f3261e10d26' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='58739' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OFb9uWA0/pbuilderrc_gbTb --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OFb9uWA0/b1 --logfile b1/build.log elph_1.0.1-5.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos2-i386 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 4 11:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/58739/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), help2man dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19876 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu72{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 19.5 MB of archives. After unpacking 74.2 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 liblocale-gettext-perl i386 1.07-6+b1 [15.3 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-2+b1 [314 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 libmagic1 i386 1:5.45-2+b1 [114 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-2+b1 [43.0 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-3 [1195 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.39.3-6 [93.3 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-1+b2 [39.6 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.0-3 [1413 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 24 http://deb.debian.org/debian trixie/main i386 libelf1 i386 0.190-1+b1 [182 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1 [118 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 help2man i386 1.49.3 [198 kB] Fetched 19.5 MB in 0s (45.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19876 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-6+b1_i386.deb ... Unpacking liblocale-gettext-perl (1.07-6+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../03-libmagic1_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic1:i386 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-2+b1_i386.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../06-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-3_i386.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.39.3-6_i386.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../09-libpipeline1_1.5.7-1+b2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1+b2) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.12.0-3_i386.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../23-libelf1_0.190-1+b1_i386.deb ... Unpacking libelf1:i386 (0.190-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.15-1_i386.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../25-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.3+b2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-14+b1_i386.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package help2man. Preparing to unpack .../31-help2man_1.49.3_i386.deb ... Unpacking help2man (1.49.3) ... Setting up libpipeline1:i386 (1.5.7-1+b2) ... Setting up libicu72:i386 (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1:i386 (1:5.45-2+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2+b1) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libelf1:i386 (0.190-1+b1) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Setting up liblocale-gettext-perl (1.07-6+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.37-15) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/elph-1.0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../elph_1.0.1-5_source.changes dpkg-buildpackage: info: source package elph dpkg-buildpackage: info: source version 1.0.1-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --sourcedirectory=sources debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/elph-1.0.1' dh_auto_clean cd sources && make -j8 clean make[2]: Entering directory '/build/reproducible-path/elph-1.0.1/sources' make[2]: Leaving directory '/build/reproducible-path/elph-1.0.1/sources' rm -f debian/elph.1 make[1]: Leaving directory '/build/reproducible-path/elph-1.0.1' dh_autoreconf_clean -O--sourcedirectory=sources dh_clean -O--sourcedirectory=sources rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/elph.substvars debian/files rm -fr -- debian/elph/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --sourcedirectory=sources dh_update_autotools_config -O--sourcedirectory=sources dh_autoreconf -O--sourcedirectory=sources dh_auto_configure -O--sourcedirectory=sources debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/elph-1.0.1' dpkg-architecture -f -ai386 -c dh_auto_build -- LINKER='$(CXX)' cd sources && make -j8 "INSTALL=install --strip-program=true" LINKER=\$\(CXX\) make[2]: Entering directory '/build/reproducible-path/elph-1.0.1/sources' g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/reproducible-path/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c elph.cc -o elph.o g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/reproducible-path/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c motif.cc -o motif.o g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/reproducible-path/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GBase.cpp -o GBase.o g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/reproducible-path/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GString.cpp -o GString.o g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/reproducible-path/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GArgs.cpp -o GArgs.o In file included from elph.cc:5: GString.h:128:31: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 128 | GString& trim(char* c=" \t\n\r"); | ^~~~~~~~~ GString.h:129:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 129 | GString& trimR(char* c=" \t\n\r"); //trim only right end | ^~~~~~~~~ GString.h:131:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 131 | GString& trimL(char* c=" \t\n\r"); //trim only left end | ^~~~~~~~~ GString.h:136:51: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096); | ^~~~ elph.cc: In function 'int main(int, char**)': elph.cc:81:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 81 | GArgs args(argc, argv, "ho:abreglvdzxt:p:s:m:n:LEN=ITERNO=MAXLOOP=SGFNO="); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GBase.cpp: In function 'int strhash(const char*)': GBase.cpp:211:16: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 211 | register int h=0; | ^ GBase.cpp:212:16: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 212 | register int g; | ^ In file included from GString.cpp:2: GString.h:128:31: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 128 | GString& trim(char* c=" \t\n\r"); | ^~~~~~~~~ GString.h:129:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 129 | GString& trimR(char* c=" \t\n\r"); //trim only right end | ^~~~~~~~~ GString.h:131:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 131 | GString& trimL(char* c=" \t\n\r"); //trim only left end | ^~~~~~~~~ GString.h:136:51: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096); | ^~~~ GString.cpp: In member function 'GString& GString::trim(char)': GString.cpp:367:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 367 | register int istart; | ^~~~~~ GString.cpp:368:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 368 | register int iend; | ^~~~ GString.cpp: In member function 'GString& GString::trim(char*)': GString.cpp:387:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 387 | register int istart; | ^~~~~~ GString.cpp:388:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 388 | register int iend; | ^~~~ GString.cpp: In member function 'GString& GString::trimR(char)': GString.cpp:408:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 408 | register int iend; | ^~~~ GString.cpp: In member function 'GString& GString::trimR(char*)': GString.cpp:426:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 426 | register int iend; | ^~~~ GString.cpp: In member function 'GString& GString::trimL(char)': GString.cpp:443:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 443 | register int istart; | ^~~~~~ GString.cpp: In member function 'GString& GString::trimL(char*)': GString.cpp:460:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 460 | register int istart; | ^~~~~~ GString.cpp: In member function 'bool GString::is_space() const': GString.cpp:601:31: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 601 | for (register const char *p = chars(); *p; p++) | ^ GString.cpp: In member function 'GString& GString::upper()': GString.cpp:892:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 892 | for (register char *p = chrs(); *p; p++) | ^ GString.cpp: In member function 'GString& GString::lower()': GString.cpp:903:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 903 | for (register char *p = chrs(); *p; p++) | ^ motif.cc: In member function 'double Motif::findMotif(int, int, int, int, int)': motif.cc:2876:14: warning: variable 'prevProb' set but not used [-Wunused-but-set-variable] 2876 | double prevProb=0; | ^~~~~~~~ motif.cc:2878:14: warning: variable 'locMaxInfo' set but not used [-Wunused-but-set-variable] 2878 | double locMaxInfo=0; | ^~~~~~~~~~ elph.cc:134:30: warning: 'info' may be used uninitialized [-Wmaybe-uninitialized] 134 | globAlignProb=M->optimize(globAlignProb,info,closest); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ elph.cc:127:12: note: 'info' was declared here 127 | double info; | ^~~~ GString.cpp: In member function 'GString& GString::trimL(char)': GString.cpp:454:10: warning: 'void* memcpy(void*, const void*, size_t)' specified bound between 2147483651 and 4294967295 exceeds maximum object size 2147483647 [-Wstringop-overflow=] 454 | ::memcpy(data->chars, &chars()[istart], newlen); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GString.cpp: In member function 'GString& GString::trimL(char*)': GString.cpp:472:10: warning: 'void* memcpy(void*, const void*, size_t)' specified bound between 2147483651 and 4294967295 exceeds maximum object size 2147483647 [-Wstringop-overflow=] 472 | ::memcpy(data->chars, &chars()[istart], newlen); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ motif.cc: In member function 'double Motif::findMDet(int)': motif.cc:1222:9: warning: 'maxinfo' may be used uninitialized [-Wmaybe-uninitialized] 1222 | diff=maxinfo-optinfo; | ~~~~^~~~~~~~~~~~~~~~ motif.cc:1187:12: note: 'maxinfo' was declared here 1187 | double maxinfo; | ^~~~~~~ motif.cc: In constructor 'Motif::Motif(const char*, FILE*, seqType, const char*, const char*, int, int, int, int, int)': motif.cc:1045:29: warning: 'info' may be used uninitialized [-Wmaybe-uninitialized] 1045 | globAlignProb=optimize(globAlignProb,info,0); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ motif.cc:1042:14: note: 'info' was declared here 1042 | double info; | ^~~~ g++ -o elph elph.o motif.o GBase.o GString.o GArgs.o make[2]: Leaving directory '/build/reproducible-path/elph-1.0.1/sources' help2man -h "-h" -n ELPH --version-string=1.0.1 --no-discard-stderr sources/elph > debian/elph.1 make[1]: Leaving directory '/build/reproducible-path/elph-1.0.1' dh_auto_test -O--sourcedirectory=sources rm -fr -- /tmp/dh-xdg-rundir-9XbOqLVk create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=sources dh_prep -O--sourcedirectory=sources rm -f -- debian/elph.substvars rm -fr -- debian/.debhelper/generated/elph/ debian/elph/ debian/tmp/ dh_auto_install --destdir=debian/elph/ -O--sourcedirectory=sources install -m0755 -d /build/reproducible-path/elph-1.0.1/debian/elph dh_install -O--sourcedirectory=sources install -m0755 -d debian/elph/usr/bin cp --reflink=auto -a ./sources/elph debian/elph/usr/bin/ dh_installdocs -O--sourcedirectory=sources install -m0755 -d debian/elph/usr/share/doc/elph install -m0755 -d debian/elph/usr/share/doc/elph cp --reflink=auto -a ./debian/README.Debian debian/elph/usr/share/doc/elph cp --reflink=auto -a ./debian/README.source debian/elph/usr/share/doc/elph cp --reflink=auto -a ./README debian/elph/usr/share/doc/elph cp --reflink=auto -a ./Readme.ELPH debian/elph/usr/share/doc/elph chmod -R u\+rw,go=rX debian/elph/usr/share/doc install -p -m0644 debian/README.Debian debian/elph/usr/share/doc/elph/README.Debian install -p -m0644 debian/copyright debian/elph/usr/share/doc/elph/copyright dh_installchangelogs -O--sourcedirectory=sources install -m0755 -d debian/elph/usr/share/doc/elph install -p -m0644 debian/.debhelper/generated/elph/dh_installchangelogs.dch.trimmed debian/elph/usr/share/doc/elph/changelog.Debian dh_installman -O--sourcedirectory=sources install -m0755 -d debian/elph/usr/share/man/man1/ install -p -m0644 ./debian/elph.1 debian/elph/usr/share/man/man1/elph.1 man-recode --to-code UTF-8 --suffix .dh-new debian/elph/usr/share/man/man1/elph.1 mv debian/elph/usr/share/man/man1/elph.1.dh-new debian/elph/usr/share/man/man1/elph.1 chmod 0644 -- debian/elph/usr/share/man/man1/elph.1 dh_installsystemduser -O--sourcedirectory=sources dh_perl -O--sourcedirectory=sources dh_link -O--sourcedirectory=sources dh_strip_nondeterminism -O--sourcedirectory=sources dh_compress -O--sourcedirectory=sources cd debian/elph chmod a-x usr/share/doc/elph/Readme.ELPH usr/share/doc/elph/changelog.Debian usr/share/man/man1/elph.1 gzip -9nf usr/share/doc/elph/Readme.ELPH usr/share/doc/elph/changelog.Debian usr/share/man/man1/elph.1 cd '/build/reproducible-path/elph-1.0.1' dh_fixperms -O--sourcedirectory=sources find debian/elph ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/elph/usr/share/doc -type f -a -true -a ! -regex 'debian/elph/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/elph/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/elph/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/elph -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/elph/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -O--sourcedirectory=sources dh_dwz -a -O--sourcedirectory=sources dwz -- debian/elph/usr/bin/elph dh_strip -a -O--sourcedirectory=sources install -m0755 -d debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/elph/usr/bin/elph debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/e7/d2f28e384d33acdc3016cdd3203ca6f5468779.debug chmod 0644 -- debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/e7/d2f28e384d33acdc3016cdd3203ca6f5468779.debug strip --remove-section=.comment --remove-section=.note debian/elph/usr/bin/elph objcopy --add-gnu-debuglink debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/e7/d2f28e384d33acdc3016cdd3203ca6f5468779.debug debian/elph/usr/bin/elph install -m0755 -d debian/.debhelper/elph/dbgsym-root/usr/share/doc ln -s elph debian/.debhelper/elph/dbgsym-root/usr/share/doc/elph-dbgsym install -m0755 -d debian/.debhelper/elph dh_makeshlibs -a -O--sourcedirectory=sources rm -f debian/elph/DEBIAN/shlibs dh_shlibdeps -a -O--sourcedirectory=sources install -m0755 -d debian/elph/DEBIAN dpkg-shlibdeps -Tdebian/elph.substvars debian/elph/usr/bin/elph dh_installdeb -O--sourcedirectory=sources install -m0755 -d debian/elph/DEBIAN dh_gencontrol -O--sourcedirectory=sources install -m0755 -d debian/elph/DEBIAN echo misc:Depends= >> debian/elph.substvars echo misc:Pre-Depends= >> debian/elph.substvars install -m0755 -d debian/.debhelper/elph/dbgsym-root/DEBIAN dpkg-gencontrol -pelph -ldebian/changelog -Tdebian/elph.substvars -cdebian/control -Pdebian/.debhelper/elph/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=elph-dbgsym "-DDepends=elph (= \${binary:Version})" "-DDescription=debug symbols for elph" -DBuild-Ids=e7d2f28e384d33acdc3016cdd3203ca6f5468779 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/elph/dbgsym-root/DEBIAN/control dpkg-gencontrol -pelph -ldebian/changelog -Tdebian/elph.substvars -cdebian/control -Pdebian/elph chmod 0644 -- debian/elph/DEBIAN/control dh_md5sums -O--sourcedirectory=sources install -m0755 -d debian/elph/DEBIAN cd debian/elph >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/elph/DEBIAN/md5sums install -m0755 -d debian/.debhelper/elph/dbgsym-root/DEBIAN cd debian/.debhelper/elph/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/elph/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--sourcedirectory=sources dpkg-deb --root-owner-group --build debian/elph .. dpkg-deb --root-owner-group --build debian/.debhelper/elph/dbgsym-root .. dpkg-deb: building package 'elph' in '../elph_1.0.1-5_i386.deb'. dpkg-deb: building package 'elph-dbgsym' in '../elph-dbgsym_1.0.1-5_i386.deb'. dpkg-genbuildinfo --build=binary -O../elph_1.0.1-5_i386.buildinfo dpkg-genchanges --build=binary -O../elph_1.0.1-5_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/58739 and its subdirectories I: Current time: Fri Apr 5 00:44:26 -12 2024 I: pbuilder-time-stamp: 1712321066 Fri Apr 5 12:44:27 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Fri Apr 5 12:44:27 UTC 2024 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Fri Apr 5 12:45:00 UTC 2024 I: Deleting $TMPDIR on ionos6-i386.debian.net. Fri Apr 5 12:45:01 UTC 2024 I: elph_1.0.1-5_i386.changes: Format: 1.8 Date: Tue, 30 Jun 2020 20:41:48 +0530 Source: elph Binary: elph elph-dbgsym Architecture: i386 Version: 1.0.1-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: elph - DNA/protein sequence motif finder Changes: elph (1.0.1-5) unstable; urgency=medium . * Team Upload. * compat version: 13 * Add "Rules-Requires-Root:no" * Add autopkgtests * Bump standards version to 4.5.0 * Add salsa-ci.yml Checksums-Sha1: 7ff24a9485e7a65aa0463e2912bb20a3415b1795 114812 elph-dbgsym_1.0.1-5_i386.deb f13f8f9163724eac7c44ba41a0fa5488a38de2db 5407 elph_1.0.1-5_i386.buildinfo 44d0a3b9a05e8ac6f7e99534017b3f09844f387d 53480 elph_1.0.1-5_i386.deb Checksums-Sha256: b3ee151403f312ec9275c3c5815907dbe1f1d93b86eed08ade06e3a8630e020d 114812 elph-dbgsym_1.0.1-5_i386.deb bfcfd8f51af11852b23c88297ea72b9d9fba6d917852cb58bc1b781a3f9b288d 5407 elph_1.0.1-5_i386.buildinfo d3e9c078bf5bba26b94b990ad6358c4a6099d2eeb90b66d9c07fa27ba1621fc8 53480 elph_1.0.1-5_i386.deb Files: 7afb42f71696e3ac3882b3705ae8bb15 114812 debug optional elph-dbgsym_1.0.1-5_i386.deb 164ffa51aa65725edd5b6b8fba08df23 5407 science optional elph_1.0.1-5_i386.buildinfo d7ab92cabf2e6e7e6e6e802a90ecec24 53480 science optional elph_1.0.1-5_i386.deb Fri Apr 5 12:45:02 UTC 2024 I: diffoscope 262 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_1-21525.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.OFb9uWA0/elph_1.0.1-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.OFb9uWA0/elph_1.0.1-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.OFb9uWA0/elph_1.0.1-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.OFb9uWA0/b1/elph_1.0.1-5_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.OFb9uWA0/b2/elph_1.0.1-5_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.402s) 0.402s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 737ms CPU time consumed: 734ms Fri Apr 5 12:45:03 UTC 2024 I: diffoscope 262 found no differences in the changes files, and a .buildinfo file also exists. Fri Apr 5 12:45:03 UTC 2024 I: elph from trixie built successfully and reproducibly on i386. Fri Apr 5 12:45:04 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Apr 5 12:45:04 UTC 2024 I: Submitting 8.0K b1/elph_1.0.1-5_i386.buildinfo.asc Fri Apr 5 12:45:05 UTC 2024 I: Submitting 8.0K b2/elph_1.0.1-5_i386.buildinfo.asc Fri Apr 5 12:45:07 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Apr 5 12:45:07 UTC 2024 I: Done submitting .buildinfo files. Fri Apr 5 12:45:07 UTC 2024 I: Removing signed elph_1.0.1-5_i386.buildinfo.asc files: removed './b1/elph_1.0.1-5_i386.buildinfo.asc' removed './b2/elph_1.0.1-5_i386.buildinfo.asc'