Sat May 18 07:18:21 UTC 2024 I: starting to build python-iow/trixie/i386 on jenkins on '2024-05-18 07:18' Sat May 18 07:18:21 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_19/995/console.log Sat May 18 07:18:21 UTC 2024 I: Downloading source for trixie/python-iow=1.0.6-5 --2024-05-18 07:18:22-- http://deb.debian.org/debian/pool/main/p/python-iow/python-iow_1.0.6-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2161 (2.1K) [text/prs.lines.tag] Saving to: ‘python-iow_1.0.6-5.dsc’ 0K .. 100% 304M=0s 2024-05-18 07:18:22 (304 MB/s) - ‘python-iow_1.0.6-5.dsc’ saved [2161/2161] Sat May 18 07:18:22 UTC 2024 I: python-iow_1.0.6-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-iow Binary: python3-iow Architecture: any Version: 1.0.6-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/biocore/improved-octo-waddle Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/python-iow Vcs-Git: https://salsa.debian.org/med-team/python-iow.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, libbitarray-dev, python3-all-dev, python3-setuptools, python3-numpy, python3-pandas , python3-skbio (>= 0.5.8-3~) Package-List: python3-iow deb python optional arch=any Checksums-Sha1: 11db45e8c8a81b35aa7e03cc3c74b48a8ab539b6 158810 python-iow_1.0.6.orig.tar.gz bb92fb53f519e7325b2e3649403102aa60637258 4468 python-iow_1.0.6-5.debian.tar.xz Checksums-Sha256: 908eecab197837324644e9ead6ef3d17dd7d6c651ef1a31b4900bda4c5f3206b 158810 python-iow_1.0.6.orig.tar.gz 64f6b597db3c94de3eb7bf621dd97a5d6913a1c758513178248f1d78bfb318f8 4468 python-iow_1.0.6-5.debian.tar.xz Files: f4d963ab682a02e7a074535a000f5a93 158810 python-iow_1.0.6.orig.tar.gz dd81931f4e7db400cc31c59c59e5ae1f 4468 python-iow_1.0.6-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmY0vUIRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBpk2g/8DhEPwaTUUnMUbF2GZNwHzt56OqNqqYXq yLXWkq/27e61Q9YN0NHtzjRGJ7tYO528S2VKYwvx5jmHvy5/BvpaWo/9zmSyqhUP gWAH3MjXvGt6yHzeaTNE2RpGRmJTdo4szUGJnTStRW5n7yxTpdM6vCoLGPODoGV5 1JfyXzyMhWDxLnW7qs5IAj7/L4P5M7h94hxQK2gC4u1KgcNkS08Pl8e1y+MVbwPr kjKE4IEHyVZBnq5lEjsSmJr1Lj8vdjvbF7L+03c7sMcsReXSe7vU6soPeVZRyjux e6P9QqfrYlxGGjZohBQBMQetzKsO6i+Z6n1jTk1dbwi1cWLN2fuhIq3K3SKt34Fc hLQGt7ZOKWcH6ltTpgEm0HQml6WC1ATS2fsVF+Xi7uVNzNdBn/7d8Kt2DkhEo+h7 PZipmxgDL7pE0MIN8y2Dg+ZSU0U220RAGkDU46LZvru+uG99utAr50KDnfZ9UeJY Ca8Jotpd4jBYZEQCDG4eGsPAm+KJMXqnxO1CvM5V9lTMGVY1ZKUBiJ1dPzjN6QAU DqeNOtGI8V5GuU5P5+vK/ttdmDdnvc3I22YbmPLpcxZU8UP+liGTegVZBDh+KzMk 0dyQZNHgyF5B4k27hHjA4rGnk+Wy+eV1do93eX8rTObZAUVY6QJR8M8saUr+3jKW Vri3OXaaCaE= =d5TD -----END PGP SIGNATURE----- Sat May 18 07:18:22 UTC 2024 I: Checking whether the package is not for us Sat May 18 07:18:22 UTC 2024 I: Starting 1st build on remote node infom07-i386.debian.net. Sat May 18 07:18:22 UTC 2024 I: Preparing to do remote build '1' on infom07-i386.debian.net. Sat May 18 07:18:39 UTC 2024 I: Deleting $TMPDIR on infom07-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 17 19:18:24 -12 2024 I: pbuilder-time-stamp: 1716016704 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-iow_1.0.6-5.dsc] I: copying [./python-iow_1.0.6.orig.tar.gz] I: copying [./python-iow_1.0.6-5.debian.tar.xz] I: Extracting source gpgv: Signature made Fri May 3 10:32:34 2024 gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A gpgv: issuer "tchet@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-iow_1.0.6-5.dsc: no acceptable signature found dpkg-source: info: extracting python-iow in python-iow-1.0.6 dpkg-source: info: unpacking python-iow_1.0.6.orig.tar.gz dpkg-source: info: unpacking python-iow_1.0.6-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no-runtime-cython.patch dpkg-source: info: applying fix_test.diff I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2347/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='597e056b4cc742e2a9361aba8c536219' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2347' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RD8y5tUq/pbuilderrc_UNQV --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RD8y5tUq/b1 --logfile b1/build.log python-iow_1.0.6-5.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom07-i386 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 17 14:57 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2347/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, libbitarray-dev, python3-all-dev, python3-setuptools, python3-numpy, python3-pandas, python3-skbio (>= 0.5.8-3~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19685 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on libbitarray-dev; however: Package libbitarray-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-skbio (>= 0.5.8-3~); however: Package python3-skbio is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbitarray-dev{a} libblas3{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-dateutil{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-setuptools{a} python3-six{a} python3-tz{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-scipy python3-tables wget 0 packages upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 71.3 MB of archives. After unpacking 322 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: python3-skbio (>= 0.5.8-3~) which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbitarray-dev{a} libblas3{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-dateutil{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-setuptools{a} python3-six{a} python3-tz{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-scipy python3-tables wget 0 packages upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 71.3 MB of archives. After unpacking 322 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2347 and its subdirectories Sat May 18 07:18:40 UTC 2024 W: No second build log, what happened? Sat May 18 07:18:40 UTC 2024 W: Downloading the build dependencies failed Sat May 18 07:18:40 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Sat May 18 07:18:40 UTC 2024 W: Network problems are automatically rescheduled after some hours.