Sat May 18 19:05:01 UTC 2024 I: starting to build q2-feature-table/trixie/i386 on jenkins on '2024-05-18 19:04' Sat May 18 19:05:01 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_17/638/console.log Sat May 18 19:05:01 UTC 2024 I: Downloading source for trixie/q2-feature-table=2023.9.0+dfsg-1 --2024-05-18 19:05:01-- http://deb.debian.org/debian/pool/main/q/q2-feature-table/q2-feature-table_2023.9.0%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2317 (2.3K) [text/prs.lines.tag] Saving to: ‘q2-feature-table_2023.9.0+dfsg-1.dsc’ 0K .. 100% 326M=0s 2024-05-18 19:05:01 (326 MB/s) - ‘q2-feature-table_2023.9.0+dfsg-1.dsc’ saved [2317/2317] Sat May 18 19:05:01 UTC 2024 I: q2-feature-table_2023.9.0+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: q2-feature-table Binary: q2-feature-table Architecture: all Version: 2023.9.0+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Liubov Chuprikova Homepage: https://qiime2.org/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/q2-feature-table Vcs-Git: https://salsa.debian.org/med-team/q2-feature-table.git Testsuite: autopkgtest Testsuite-Triggers: python3-pytest-cov Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-pytest-cov, python3-biom-format, python3-seaborn, qiime (>= 2023.9), q2templates (>= 2023.9), q2-types (>= 2023.9) Package-List: q2-feature-table deb science optional arch=all Checksums-Sha1: e0ac52a95169aea68b2681eb334346167dec5c68 406168 q2-feature-table_2023.9.0+dfsg.orig.tar.xz 539d152650d29688c50b5c080c50d65804ac5623 383208 q2-feature-table_2023.9.0+dfsg-1.debian.tar.xz Checksums-Sha256: dbb235e3ba473e1057f47107acf5e2d9e1fe83b800d547d30532a80f574ad74a 406168 q2-feature-table_2023.9.0+dfsg.orig.tar.xz 6373aacfb04476ca1abd657bb6ec22a744cf56094ebe72067881277e77eebf1d 383208 q2-feature-table_2023.9.0+dfsg-1.debian.tar.xz Files: 0e138bab7499a69cf1e70bf7575c8bcf 406168 q2-feature-table_2023.9.0+dfsg.orig.tar.xz 55de522c96f80a462a62ae4ab280b491 383208 q2-feature-table_2023.9.0+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmW4pE8RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFHRg/+NyvfLEVxRKQnhxp33AZm7xPclMF0lOTr k9SHYs2ciq7hAZXBePC+MrDEePpX9D1gJMRboJSXAmn3nOavgZV4ww/T/9kpqYDx q+VYCs4Iaoi/zV+l5n1ZcX/HOu85bpDEW7uMN43NejNyM1y9Sfro68Nd+IjiaUwz 5Uc/pgtaDzHZ+BJoZ42wlWfmvqjp8H6AC96bBqwVAmZpxdJIvQ8+vSKo7k0G1nYI R7i6ftCZzXmQOLNqL1nlLEiu+CSX38XMc/rQ5A59FzvyCLkhaIwndtha0lU+46dO xE42hbnO9ZJ8OGWBBUOafwTKV1S5fv7vf0XcaH6csprgazlNcWA5oemgUkM7ROL+ cy5zev8Mma+8slj8CTqW4nsa5nscEBQHWs4R7ixn83EXVYNmFO0Snb1K+kazwbAv hOFAF6/e2bnhjwke/05WN2qX9hjZByw8xeNVtAWo+KnvgRirbHPmfwkx5RNuTK/v ZKviSnD2y/9SO00P0mY7MWuu7pVdgKsesgW9VIgRYx0bRDZx/wOg3h+5ywmexvfV rreVrAWmWPeVghPIuouode6b5mpe4WkayyuydZj+FJ+EcajAdApCYG3X0hQCG21z yx2sov6YZiapQXMeIfxtcYrOAEImNJ4ulqvmomOnYUY7UOG/JvDRN2+Z0Qc/1Q7G Lrp6MHSlhgQ= =c7NL -----END PGP SIGNATURE----- Sat May 18 19:05:01 UTC 2024 I: Checking whether the package is not for us Sat May 18 19:05:01 UTC 2024 I: Starting 1st build on remote node infom07-i386.debian.net. Sat May 18 19:05:01 UTC 2024 I: Preparing to do remote build '1' on infom07-i386.debian.net. Sat May 18 19:05:19 UTC 2024 I: Deleting $TMPDIR on infom07-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat May 18 07:05:03 -12 2024 I: pbuilder-time-stamp: 1716059103 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [q2-feature-table_2023.9.0+dfsg-1.dsc] I: copying [./q2-feature-table_2023.9.0+dfsg.orig.tar.xz] I: copying [./q2-feature-table_2023.9.0+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jan 30 07:25:03 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./q2-feature-table_2023.9.0+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting q2-feature-table in q2-feature-table-2023.9.0+dfsg dpkg-source: info: unpacking q2-feature-table_2023.9.0+dfsg.orig.tar.xz dpkg-source: info: unpacking q2-feature-table_2023.9.0+dfsg-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15155/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='cfbb8fe5803141eb96f2c8eb0bd96c00' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15155' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.wASLc2oP/pbuilderrc_6InL --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.wASLc2oP/b1 --logfile b1/build.log q2-feature-table_2023.9.0+dfsg-1.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom07-i386 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 17 14:57 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15155/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-pytest-cov, python3-biom-format, python3-seaborn, qiime (>= 2023.9), q2templates (>= 2023.9), q2-types (>= 2023.9) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19685 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. pbuilder-satisfydepends-dummy depends on python3-biom-format; however: Package python3-biom-format is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on qiime (>= 2023.9); however: Package qiime is not installed. pbuilder-satisfydepends-dummy depends on q2templates (>= 2023.9); however: Package q2templates is not installed. pbuilder-satisfydepends-dummy depends on q2-types (>= 2023.9); however: Package q2-types is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libnorm1t64{a} libopenjp2-7{a} libpgm-5.3-0t64{a} libpipeline1{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libsodium23{a} libsub-override-perl{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-fortawesome-fontawesome-free{a} node-normalize.css{a} openssl{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-appdirs{a} python3-attr{a} python3-bcrypt{a} python3-bibtexparser{a} python3-blinker{a} python3-brotli{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cryptography{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-distutils{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-fonttools{a} python3-fs{a} python3-globus-sdk{a} python3-greenlet{a} python3-idna{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jinja2{a} python3-jwt{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-mpmath{a} python3-nacl{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-paramiko{a} python3-parsl{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-scipy{a} python3-seaborn{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-sympy{a} python3-tblib{a} python3-tk{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-ufolib2{a} python3-unicodedata2{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zmq{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} q2templates{a} qiime{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common krb5-locales libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx node-jquery python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-invoke python3-numexpr python3-odf python3-olefile python3-openpyxl python3-openssl python3-patsy python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-simplejson python3-sqlalchemy-ext python3-tables q2-feature-table q2-quality-filter q2cli r-cran-plotly shared-mime-info wget xdg-user-dirs 0 packages upgraded, 203 newly installed, 0 to remove and 0 not upgraded. Need to get 127 MB of archives. After unpacking 594 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: python3-biom-format which is a virtual package and is not provided by any available package Depends: q2-types (>= 2023.9) but it is not installable Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libnorm1t64{a} libopenjp2-7{a} libpgm-5.3-0t64{a} libpipeline1{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libsodium23{a} libsub-override-perl{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-fortawesome-fontawesome-free{a} node-normalize.css{a} openssl{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-appdirs{a} python3-attr{a} python3-bcrypt{a} python3-bibtexparser{a} python3-blinker{a} python3-brotli{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cryptography{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-distutils{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-fonttools{a} python3-fs{a} python3-globus-sdk{a} python3-greenlet{a} python3-idna{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jinja2{a} python3-jwt{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-mpmath{a} python3-nacl{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-paramiko{a} python3-parsl{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-scipy{a} python3-seaborn{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-sympy{a} python3-tblib{a} python3-tk{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-ufolib2{a} python3-unicodedata2{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zmq{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} q2templates{a} qiime{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common krb5-locales libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx node-jquery python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-invoke python3-numexpr python3-odf python3-olefile python3-openpyxl python3-openssl python3-patsy python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-simplejson python3-sqlalchemy-ext python3-tables q2-feature-table q2-quality-filter q2cli r-cran-plotly shared-mime-info wget xdg-user-dirs 0 packages upgraded, 203 newly installed, 0 to remove and 0 not upgraded. Need to get 127 MB of archives. After unpacking 594 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15155 and its subdirectories Sat May 18 19:05:20 UTC 2024 W: No second build log, what happened? Sat May 18 19:05:20 UTC 2024 W: Downloading the build dependencies failed Sat May 18 19:05:20 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Sat May 18 19:05:20 UTC 2024 W: Network problems are automatically rescheduled after some hours.