Wed May 8 19:09:32 UTC 2024 I: starting to build r-bioc-rhdf5filters/unstable/amd64 on jenkins on '2024-05-08 19:09' Wed May 8 19:09:32 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_10/5562/console.log Wed May 8 19:09:32 UTC 2024 I: Downloading source for unstable/r-bioc-rhdf5filters=1.14.1+dfsg-3 --2024-05-08 19:09:32-- http://deb.debian.org/debian/pool/main/r/r-bioc-rhdf5filters/r-bioc-rhdf5filters_1.14.1%2bdfsg-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2308 (2.3K) [text/prs.lines.tag] Saving to: ‘r-bioc-rhdf5filters_1.14.1+dfsg-3.dsc’ 0K .. 100% 369M=0s 2024-05-08 19:09:32 (369 MB/s) - ‘r-bioc-rhdf5filters_1.14.1+dfsg-3.dsc’ saved [2308/2308] Wed May 8 19:09:32 UTC 2024 I: r-bioc-rhdf5filters_1.14.1+dfsg-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: r-bioc-rhdf5filters Binary: r-bioc-rhdf5filters Architecture: any Version: 1.14.1+dfsg-3 Maintainer: Debian R Packages Maintainers Uploaders: Dylan Aïssi Homepage: https://bioconductor.org/packages/rhdf5filters/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-rhdf5filters Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-rhdf5filters.git Testsuite: autopkgtest-pkg-r Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-rhdf5lib, libbz2-dev, libblosc-dev, libhdf5-dev, libzstd-dev, libsnappy-dev, libvbz-hdf-plugin-dev [!s390x !hppa !m68k !powerpc !ppc64 !sparc64] Package-List: r-bioc-rhdf5filters deb gnu-r optional arch=any Checksums-Sha1: ee23a56cdd290073659f8578cc5b2c2e6188dfdc 177344 r-bioc-rhdf5filters_1.14.1+dfsg.orig.tar.xz 8f8e0a85112862ab86e1162469fc4fc1f8831b0c 5640 r-bioc-rhdf5filters_1.14.1+dfsg-3.debian.tar.xz Checksums-Sha256: a87efbcdc8d16c58e86b5d0d6218d9a0e8a6e91330b1de162afed695de7d4bbe 177344 r-bioc-rhdf5filters_1.14.1+dfsg.orig.tar.xz 43b4c4302ee2596d5892d837e6c069347202f8300b454e949a56c16ebaf613c0 5640 r-bioc-rhdf5filters_1.14.1+dfsg-3.debian.tar.xz Files: 922b3a0aff4b17f0537fc61ba591bf70 177344 r-bioc-rhdf5filters_1.14.1+dfsg.orig.tar.xz edb70fa5f6724fc1756d9b0734af5b65 5640 r-bioc-rhdf5filters_1.14.1+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmV4ad8RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFoAQ//X2iqxUVjTse+o5aea/4xuOagh1L3dckz uTPH1jH0zIRmUHXujSBAtrJAjfBsMlfO86Bz0LIeocZ8AKjXOqor/geG0Y1uQ/I2 eYs8FvVlSC1St/epfjHCQ/WrEDUnI7NG9MMXeNFC7CurbiW2AFNgwyh3TSJ4kCt0 OhTx9WgTtY/SqEqdMnGASPhvKlaemQcyRdiOnQHWEZAlOEUHM/Z/AgBN5MG1DEBh NVm/dxLUBJVb4kQdFl47rvgBkHCOftzsIIXLc3/6uCsp9j4Xubmp84mS1+VGGCmM e1PfYQM/sCGj08uPDfvZAvvfYLpcngvcPH8D8O6NtujVBgsGIZKcbhc9v3WajMJC uIvZrvJFIWxbKWRDVXHOoAm4xxJ4lrMTzwWqf1goWbbJMU0U03sJvdoP3z2sOEbr HQc6TgsFBGhp6eHh6xqF+kMRHsY/2rVjJ6kGbuJpQuGEjVyF2k+jzHCcrqF5bkTl 8trhtPWVRyJ4vq+LyJGZb8ztXcf+a0Mkm//PNO6XgSF6boa9DoF4g6PxxHRpdCqe NrkfyfQC5DZtJuBpgX6BzxVYy/PPm99A3EonDqFhCPp15mrSuEcGcTIjGyWGpYDQ Lb23V6wdEgh4Sw86/Qr8akPcgj4L/LmqDwFB012IYzd9uo/RQouwAheeZGYJz98y 0mawWAtPQ74= =IsrE -----END PGP SIGNATURE----- Wed May 8 19:09:32 UTC 2024 I: Checking whether the package is not for us Wed May 8 19:09:32 UTC 2024 I: Starting 1st build on remote node ionos5-amd64.debian.net. Wed May 8 19:09:32 UTC 2024 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Wed May 8 19:11:48 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jun 10 13:32:40 -12 2025 I: pbuilder-time-stamp: 1749605560 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [r-bioc-rhdf5filters_1.14.1+dfsg-3.dsc] I: copying [./r-bioc-rhdf5filters_1.14.1+dfsg.orig.tar.xz] I: copying [./r-bioc-rhdf5filters_1.14.1+dfsg-3.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Dec 12 14:10:39 2023 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./r-bioc-rhdf5filters_1.14.1+dfsg-3.dsc: no acceptable signature found dpkg-source: info: extracting r-bioc-rhdf5filters in r-bioc-rhdf5filters-1.14.1+dfsg dpkg-source: info: unpacking r-bioc-rhdf5filters_1.14.1+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-rhdf5filters_1.14.1+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying hardening I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1043856/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e5fdd352ad324ed4ad66455576b648fc' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1043856' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.82ZwUKZQ/pbuilderrc_judO --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.82ZwUKZQ/b1 --logfile b1/build.log r-bioc-rhdf5filters_1.14.1+dfsg-3.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 9 14:05 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1043856/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-rhdf5lib, libbz2-dev, libblosc-dev, libhdf5-dev, libzstd-dev, libsnappy-dev, libvbz-hdf-plugin-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-rhdf5lib; however: Package r-bioc-rhdf5lib is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libblosc-dev; however: Package libblosc-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libzstd-dev; however: Package libzstd-dev is not installed. pbuilder-satisfydepends-dummy depends on libsnappy-dev; however: Package libsnappy-dev is not installed. pbuilder-satisfydepends-dummy depends on libvbz-hdf-plugin-dev; however: Package libvbz-hdf-plugin-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libblosc-dev{a} libblosc1{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-13-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libsnappy-dev{a} libsnappy1v5{a} libssh2-1t64{a} libssl-dev{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsub-override-perl{a} libswitch-perl{a} libsz2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libvariable-magic-perl{a} libvbz-hdf-plugin-dev{a} libvbz-hdf-plugin0t64{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} libzstd-dev{a} m4{a} man-db{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-bioc-biocgenerics{a} r-bioc-rhdf5lib{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl lynx publicsuffix r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 206 newly installed, 0 to remove and 0 not upgraded. Need to get 112 MB of archives. After unpacking 357 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.2.1-3 [1360 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40-8 [92.8 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 29 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 zip amd64 3.0-13 [230 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libpaper1 amd64 1.1.29+b1 [12.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 1.1.29+b1 [9176 B] Get: 41 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.43-5 [278 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-1 [144 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-1 [114 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-1 [105 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.0-3+b1 [531 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1~rc2-1 [22.6 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 67 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.7.1-5 [441 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.20-1 [46.0 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.80.0-10 [1483 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14-20240429-1 [836 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.13-3+b1 [71.4 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 8.3.0-2+b1 [2214 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.52.2+ds-1 [218 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.52.2+ds-1 [48.1 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.52.2+ds-1 [35.0 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1 [1034 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-4 [322 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3 [82.7 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b1 [54.2 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b1 [17.0 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.14-1 [784 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.0.10-1+b1 [56.7 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.3-1+b1 [33.6 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2 [187 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 r-base-core amd64 4.4.0-2 [28.2 MB] Get: 109 http://deb.debian.org/debian unstable/main amd64 libgfortran-13-dev amd64 13.2.0-24 [847 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-24 [10.7 MB] Get: 111 http://deb.debian.org/debian unstable/main amd64 gfortran-13 amd64 13.2.0-24 [12.2 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7 [1280 B] Get: 113 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:13.2.0-7 [1440 B] Get: 114 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-3 [159 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-3 [4880 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libncurses6 amd64 6.4+20240414-1 [104 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libncurses-dev amd64 6.4+20240414-1 [349 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libreadline-dev amd64 8.2-4 [152 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3 [290 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3 [71.9 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.42-4+b1 [246 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.42-4+b1 [234 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libpcre2-posix3 amd64 10.42-4+b1 [55.8 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libpcre2-dev amd64 10.42-4+b1 [755 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3.1 [918 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.43-5 [360 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-5.1 [31.3 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.1+really5.4.5-1 [293 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-4+b1 [208 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-4+b1 [10.4 MB] Get: 131 http://deb.debian.org/debian unstable/main amd64 libxmuu1 amd64 2:1.1.3-3+b2 [21.9 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 xauth amd64 1:1.1.2-1 [36.0 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-1+b2 [36.4 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-1+b2 [29.7 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-1+b2 [26.2 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [189 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.20-1 [54.5 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 r-base-dev all 4.4.0-2 [4512 B] Get: 139 http://deb.debian.org/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libswitch-perl all 2.17-3 [20.3 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.46-1+b2 [13.7 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.28-1 [98.6 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 6.45-1 [82.0 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libparams-util-perl amd64 1.102-3 [24.0 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b1 [10.6 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1 [15.9 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b3 [22.4 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libclass-load-xs-perl amd64 0.10-2+b3 [14.1 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get: 163 http://deb.debian.org/debian unstable/main amd64 libdevel-globaldestruction-perl all 0.14-4 [7144 B] Get: 164 http://deb.debian.org/debian unstable/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libdevel-overloadinfo-perl all 0.007-1 [7896 B] Get: 168 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] Get: 173 http://deb.debian.org/debian unstable/main amd64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b3 [20.2 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libmoose-perl amd64 2.2207-1+b1 [766 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1 [44.7 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b2 [11.2 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libsub-name-perl amd64 0.27-1+b2 [12.5 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.7.1-5 [433 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libwww-curl-perl amd64 4.17-10+b2 [58.1 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libwww-curl-simple-perl all 0.100191-3 [12.6 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 dh-r all 20231212 [42.2 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.10.10+repack-3.3 [23.4 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get: 188 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1 [21.0 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libsnappy1v5 amd64 1.2.0-2 [29.0 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libblosc1 amd64 1.21.5+ds-1+b1 [49.6 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libblosc-dev amd64 1.21.5+ds-1+b1 [61.6 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.7.1-5 [547 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.3 [1241 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-103-1t64 amd64 1.10.10+repack-3.3 [131 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-102t64 amd64 1.10.10+repack-3.3 [89.3 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-3.3 [63.3 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-100t64 amd64 1.10.10+repack-3.3 [40.4 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-100t64 amd64 1.10.10+repack-3.3 [21.3 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.2.1-3 [2699 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.10.10+repack-3.3 [2639 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libsnappy-dev amd64 1.2.0-2 [43.5 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libvbz-hdf-plugin0t64 amd64 1.0.2-3.1 [19.2 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libvbz-hdf-plugin-dev amd64 1.0.2-3.1 [14.9 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.5+dfsg2-2 [358 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 r-bioc-biocgenerics all 0.48.1-2 [597 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 r-bioc-rhdf5lib amd64 1.24.2+dfsg-1+b1 [103 kB] Fetched 112 MB in 2s (48.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package tzdata. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../000-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../003-openssl_3.2.1-3_amd64.deb ... Unpacking openssl (3.2.1-3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../004-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../006-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../009-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../010-groff-base_1.23.0-4_amd64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../011-bsdextrautils_2.40-8_amd64.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../012-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../013-man-db_2.12.1-1_amd64.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../015-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../016-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../017-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../018-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../019-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package dctrl-tools. Preparing to unpack .../020-dctrl-tools_2.24-3+b1_amd64.deb ... Unpacking dctrl-tools (2.24-3+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../021-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../022-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../023-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../024-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../025-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../026-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../027-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../028-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../029-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../030-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../031-libxml2_2.9.14+dfsg-1.3+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../032-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../033-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../034-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../035-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package zip. Preparing to unpack .../036-zip_3.0-13_amd64.deb ... Unpacking zip (3.0-13) ... Selecting previously unselected package unzip. Preparing to unpack .../037-unzip_6.0-28_amd64.deb ... Unpacking unzip (6.0-28) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../038-libpaper1_1.1.29+b1_amd64.deb ... Unpacking libpaper1:amd64 (1.1.29+b1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../039-libpaper-utils_1.1.29+b1_amd64.deb ... Unpacking libpaper-utils (1.1.29+b1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../040-xdg-utils_1.1.3-4.1_all.deb ... Unpacking xdg-utils (1.1.3-4.1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../041-libblas3_3.12.0-3_amd64.deb ... Unpacking libblas3:amd64 (3.12.0-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../042-libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../043-libbrotli1_1.1.0-2+b3_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../044-libpng16-16t64_1.6.43-5_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.43-5) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../045-libfreetype6_2.13.2+dfsg-1+b4_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../046-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../047-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../048-fontconfig-config_2.15.0-1.1_amd64.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../049-libfontconfig1_2.15.0-1.1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-1.1) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../050-libpixman-1-0_0.42.2-1+b1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.42.2-1+b1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../051-libxau6_1%3a1.0.9-1+b1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1+b1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../052-libbsd0_0.12.2-1_amd64.deb ... Unpacking libbsd0:amd64 (0.12.2-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../053-libxdmcp6_1%3a1.1.2-3+b1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../054-libxcb1_1.17.0-1_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../055-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../056-libx11-6_2%3a1.8.7-1+b1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.7-1+b1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../057-libxcb-render0_1.17.0-1_amd64.deb ... Unpacking libxcb-render0:amd64 (1.17.0-1) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../058-libxcb-shm0_1.17.0-1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.17.0-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../059-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../060-libxrender1_1%3a0.9.10-1.1+b1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1+b1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../061-libcairo2_1.18.0-3+b1_amd64.deb ... Unpacking libcairo2:amd64 (1.18.0-3+b1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../062-libkrb5support0_1.20.1-6+b1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../063-libcom-err2_1.47.1~rc2-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1~rc2-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../064-libk5crypto3_1.20.1-6+b1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../065-libkeyutils1_1.6.3-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../066-libkrb5-3_1.20.1-6+b1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../067-libgssapi-krb5-2_1.20.1-6+b1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../068-libsasl2-modules-db_2.1.28+dfsg1-6_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../069-libsasl2-2_2.1.28+dfsg1-6_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../070-libldap-2.5-0_2.5.17+dfsg-1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../071-libnghttp2-14_1.61.0-1+b1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.61.0-1+b1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../072-libpsl5t64_0.21.2-1.1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../073-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../074-libssh2-1t64_1.11.0-4.1+b2_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.0-4.1+b2) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../075-libcurl4t64_8.7.1-5_amd64.deb ... Unpacking libcurl4t64:amd64 (8.7.1-5) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../076-libdeflate0_1.20-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.20-1) ... Selecting previously unselected package libglib2.0-0t64:amd64. Preparing to unpack .../077-libglib2.0-0t64_2.80.0-10_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.80.0-10) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../078-libjpeg62-turbo_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../079-libgfortran5_14-20240429-1_amd64.deb ... Unpacking libgfortran5:amd64 (14-20240429-1) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../080-liblapack3_3.12.0-3_amd64.deb ... Unpacking liblapack3:amd64 (3.12.0-3) ... Selecting previously unselected package fontconfig. Preparing to unpack .../081-fontconfig_2.15.0-1.1_amd64.deb ... Unpacking fontconfig (2.15.0-1.1) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../082-libfribidi0_1.0.13-3+b1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.13-3+b1) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../083-libgraphite2-3_1.3.14-2_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-2) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../084-libharfbuzz0b_8.3.0-2+b1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (8.3.0-2+b1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../085-libthai-data_0.1.29-2_all.deb ... Unpacking libthai-data (0.1.29-2) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../086-libdatrie1_0.2.13-3_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.13-3) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../087-libthai0_0.1.29-2_amd64.deb ... Unpacking libthai0:amd64 (0.1.29-2) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../088-libpango-1.0-0_1.52.2+ds-1_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.52.2+ds-1) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../089-libpangoft2-1.0-0_1.52.2+ds-1_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.52.2+ds-1) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. Preparing to unpack .../090-libpangocairo-1.0-0_1.52.2+ds-1_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.52.2+ds-1) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../091-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../092-libtcl8.6_8.6.14+dfsg-1_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../093-libjbig0_2.1-6.1+b1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1+b1) ... Selecting previously unselected package liblerc4:amd64. Preparing to unpack .../094-liblerc4_4.0.0+ds-4+b1_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-4+b1) ... Selecting previously unselected package libsharpyuv0:amd64. Preparing to unpack .../095-libsharpyuv0_1.4.0-0.1_amd64.deb ... Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... Selecting previously unselected package libwebp7:amd64. Preparing to unpack .../096-libwebp7_1.4.0-0.1_amd64.deb ... Unpacking libwebp7:amd64 (1.4.0-0.1) ... Selecting previously unselected package libtiff6:amd64. Preparing to unpack .../097-libtiff6_4.5.1+git230720-4_amd64.deb ... Unpacking libtiff6:amd64 (4.5.1+git230720-4) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../098-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../099-libtirpc3t64_1.3.4+ds-1.3_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../100-libxft2_2.3.6-1+b1_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1+b1) ... Selecting previously unselected package x11-common. Preparing to unpack .../101-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../102-libxss1_1%3a1.2.3-1+b1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1+b1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../103-libtk8.6_8.6.14-1_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.14-1) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../104-libice6_2%3a1.0.10-1+b1_amd64.deb ... Unpacking libice6:amd64 (2:1.0.10-1+b1) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../105-libsm6_2%3a1.2.3-1+b1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.3-1+b1) ... Selecting previously unselected package libxt6t64:amd64. Preparing to unpack .../106-libxt6t64_1%3a1.2.1-1.2_amd64.deb ... Unpacking libxt6t64:amd64 (1:1.2.1-1.2) ... Selecting previously unselected package r-base-core. Preparing to unpack .../107-r-base-core_4.4.0-2_amd64.deb ... Unpacking r-base-core (4.4.0-2) ... Selecting previously unselected package libgfortran-13-dev:amd64. Preparing to unpack .../108-libgfortran-13-dev_13.2.0-24_amd64.deb ... Unpacking libgfortran-13-dev:amd64 (13.2.0-24) ... Selecting previously unselected package gfortran-13-x86-64-linux-gnu. Preparing to unpack .../109-gfortran-13-x86-64-linux-gnu_13.2.0-24_amd64.deb ... Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-24) ... Selecting previously unselected package gfortran-13. Preparing to unpack .../110-gfortran-13_13.2.0-24_amd64.deb ... Unpacking gfortran-13 (13.2.0-24) ... Selecting previously unselected package gfortran-x86-64-linux-gnu. Preparing to unpack .../111-gfortran-x86-64-linux-gnu_4%3a13.2.0-7_amd64.deb ... Unpacking gfortran-x86-64-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package gfortran. Preparing to unpack .../112-gfortran_4%3a13.2.0-7_amd64.deb ... Unpacking gfortran (4:13.2.0-7) ... Selecting previously unselected package libblas-dev:amd64. Preparing to unpack .../113-libblas-dev_3.12.0-3_amd64.deb ... Unpacking libblas-dev:amd64 (3.12.0-3) ... Selecting previously unselected package liblapack-dev:amd64. Preparing to unpack .../114-liblapack-dev_3.12.0-3_amd64.deb ... Unpacking liblapack-dev:amd64 (3.12.0-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../115-libncurses6_6.4+20240414-1_amd64.deb ... Unpacking libncurses6:amd64 (6.4+20240414-1) ... Selecting previously unselected package libncurses-dev:amd64. Preparing to unpack .../116-libncurses-dev_6.4+20240414-1_amd64.deb ... Unpacking libncurses-dev:amd64 (6.4+20240414-1) ... Selecting previously unselected package libreadline-dev:amd64. Preparing to unpack .../117-libreadline-dev_8.2-4_amd64.deb ... Unpacking libreadline-dev:amd64 (8.2-4) ... Selecting previously unselected package libjpeg62-turbo-dev:amd64. Preparing to unpack .../118-libjpeg62-turbo-dev_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:2.1.5-3) ... Selecting previously unselected package libjpeg-dev:amd64. Preparing to unpack .../119-libjpeg-dev_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg-dev:amd64 (1:2.1.5-3) ... Selecting previously unselected package libpcre2-16-0:amd64. Preparing to unpack .../120-libpcre2-16-0_10.42-4+b1_amd64.deb ... Unpacking libpcre2-16-0:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-32-0:amd64. Preparing to unpack .../121-libpcre2-32-0_10.42-4+b1_amd64.deb ... Unpacking libpcre2-32-0:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-posix3:amd64. Preparing to unpack .../122-libpcre2-posix3_10.42-4+b1_amd64.deb ... Unpacking libpcre2-posix3:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-dev:amd64. Preparing to unpack .../123-libpcre2-dev_10.42-4+b1_amd64.deb ... Unpacking libpcre2-dev:amd64 (10.42-4+b1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../124-zlib1g-dev_1%3a1.3.dfsg-3.1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3.1) ... Selecting previously unselected package libpng-dev:amd64. Preparing to unpack .../125-libpng-dev_1.6.43-5_amd64.deb ... Unpacking libpng-dev:amd64 (1.6.43-5) ... Selecting previously unselected package libbz2-dev:amd64. Preparing to unpack .../126-libbz2-dev_1.0.8-5.1_amd64.deb ... Unpacking libbz2-dev:amd64 (1.0.8-5.1) ... Selecting previously unselected package liblzma-dev:amd64. Preparing to unpack .../127-liblzma-dev_5.6.1+really5.4.5-1_amd64.deb ... Unpacking liblzma-dev:amd64 (5.6.1+really5.4.5-1) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../128-icu-devtools_72.1-4+b1_amd64.deb ... Unpacking icu-devtools (72.1-4+b1) ... Selecting previously unselected package libicu-dev:amd64. Preparing to unpack .../129-libicu-dev_72.1-4+b1_amd64.deb ... Unpacking libicu-dev:amd64 (72.1-4+b1) ... Selecting previously unselected package libxmuu1:amd64. Preparing to unpack .../130-libxmuu1_2%3a1.1.3-3+b2_amd64.deb ... Unpacking libxmuu1:amd64 (2:1.1.3-3+b2) ... Selecting previously unselected package xauth. Preparing to unpack .../131-xauth_1%3a1.1.2-1_amd64.deb ... Unpacking xauth (1:1.1.2-1) ... Selecting previously unselected package libpkgconf3:amd64. Preparing to unpack .../132-libpkgconf3_1.8.1-1+b2_amd64.deb ... Unpacking libpkgconf3:amd64 (1.8.1-1+b2) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../133-pkgconf-bin_1.8.1-1+b2_amd64.deb ... Unpacking pkgconf-bin (1.8.1-1+b2) ... Selecting previously unselected package pkgconf:amd64. Preparing to unpack .../134-pkgconf_1.8.1-1+b2_amd64.deb ... Unpacking pkgconf:amd64 (1.8.1-1+b2) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../135-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... Selecting previously unselected package libdeflate-dev:amd64. Preparing to unpack .../136-libdeflate-dev_1.20-1_amd64.deb ... Unpacking libdeflate-dev:amd64 (1.20-1) ... Selecting previously unselected package r-base-dev. Preparing to unpack .../137-r-base-dev_4.4.0-2_all.deb ... Unpacking r-base-dev (4.4.0-2) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../138-libfile-which-perl_1.27-2_all.deb ... Unpacking libfile-which-perl (1.27-2) ... Selecting previously unselected package libswitch-perl. Preparing to unpack .../139-libswitch-perl_2.17-3_all.deb ... Unpacking libswitch-perl (2.17-3) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../140-libclone-perl_0.46-1+b2_amd64.deb ... Unpacking libclone-perl:amd64 (0.46-1+b2) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../141-libencode-locale-perl_1.05-3_all.deb ... Unpacking libencode-locale-perl (1.05-3) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../142-libtimedate-perl_2.3300-2_all.deb ... Unpacking libtimedate-perl (2.3300-2) ... Selecting previously unselected package libhttp-date-perl. Preparing to unpack .../143-libhttp-date-perl_6.06-1_all.deb ... Unpacking libhttp-date-perl (6.06-1) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../144-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../145-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../146-liburi-perl_5.28-1_all.deb ... Unpacking liburi-perl (5.28-1) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../147-libhttp-message-perl_6.45-1_all.deb ... Unpacking libhttp-message-perl (6.45-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../148-libparams-util-perl_1.102-3_amd64.deb ... Unpacking libparams-util-perl (1.102-3) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../149-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../150-libdata-optlist-perl_0.114-1_all.deb ... Unpacking libdata-optlist-perl (0.114-1) ... Selecting previously unselected package libb-hooks-op-check-perl:amd64. Preparing to unpack .../151-libb-hooks-op-check-perl_0.22-3+b1_amd64.deb ... Unpacking libb-hooks-op-check-perl:amd64 (0.22-3+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../152-libdynaloader-functions-perl_0.003-3_all.deb ... Unpacking libdynaloader-functions-perl (0.003-3) ... Selecting previously unselected package libdevel-callchecker-perl:amd64. Preparing to unpack .../153-libdevel-callchecker-perl_0.009-1_amd64.deb ... Unpacking libdevel-callchecker-perl:amd64 (0.009-1) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../154-libparams-classify-perl_0.015-2+b3_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../155-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../156-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../157-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../158-libpackage-stash-perl_0.40-1_all.deb ... Unpacking libpackage-stash-perl (0.40-1) ... Selecting previously unselected package libclass-load-perl. Preparing to unpack .../159-libclass-load-perl_0.25-2_all.deb ... Unpacking libclass-load-perl (0.25-2) ... Selecting previously unselected package libclass-load-xs-perl. Preparing to unpack .../160-libclass-load-xs-perl_0.10-2+b3_amd64.deb ... Unpacking libclass-load-xs-perl (0.10-2+b3) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../161-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libdevel-globaldestruction-perl. Preparing to unpack .../162-libdevel-globaldestruction-perl_0.14-4_all.deb ... Unpacking libdevel-globaldestruction-perl (0.14-4) ... Selecting previously unselected package libalgorithm-c3-perl. Preparing to unpack .../163-libalgorithm-c3-perl_0.11-2_all.deb ... Unpacking libalgorithm-c3-perl (0.11-2) ... Selecting previously unselected package libclass-c3-perl. Preparing to unpack .../164-libclass-c3-perl_0.35-2_all.deb ... Unpacking libclass-c3-perl (0.35-2) ... Selecting previously unselected package libmro-compat-perl. Preparing to unpack .../165-libmro-compat-perl_0.15-2_all.deb ... Unpacking libmro-compat-perl (0.15-2) ... Selecting previously unselected package libdevel-overloadinfo-perl. Preparing to unpack .../166-libdevel-overloadinfo-perl_0.007-1_all.deb ... Unpacking libdevel-overloadinfo-perl (0.007-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../167-libdevel-stacktrace-perl_2.0500-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0500-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../168-libsub-exporter-perl_0.990-1_all.deb ... Unpacking libsub-exporter-perl (0.990-1) ... Selecting previously unselected package libeval-closure-perl. Preparing to unpack .../169-libeval-closure-perl_0.14-3_all.deb ... Unpacking libeval-closure-perl (0.14-3) ... Selecting previously unselected package libdist-checkconflicts-perl. Preparing to unpack .../170-libdist-checkconflicts-perl_0.11-2_all.deb ... Unpacking libdist-checkconflicts-perl (0.11-2) ... Selecting previously unselected package libmodule-runtime-conflicts-perl. Preparing to unpack .../171-libmodule-runtime-conflicts-perl_0.003-2_all.deb ... Unpacking libmodule-runtime-conflicts-perl (0.003-2) ... Selecting previously unselected package libpackage-deprecationmanager-perl. Preparing to unpack .../172-libpackage-deprecationmanager-perl_0.18-1_all.deb ... Unpacking libpackage-deprecationmanager-perl (0.18-1) ... Selecting previously unselected package libpackage-stash-xs-perl:amd64. Preparing to unpack .../173-libpackage-stash-xs-perl_0.30-1+b3_amd64.deb ... Unpacking libpackage-stash-xs-perl:amd64 (0.30-1+b3) ... Selecting previously unselected package libmoose-perl:amd64. Preparing to unpack .../174-libmoose-perl_2.2207-1+b1_amd64.deb ... Unpacking libmoose-perl:amd64 (2.2207-1+b1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../175-libvariable-magic-perl_0.64-1_amd64.deb ... Unpacking libvariable-magic-perl (0.64-1) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../176-libb-hooks-endofscope-perl_0.28-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.28-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../177-libsub-identify-perl_0.14-3+b2_amd64.deb ... Unpacking libsub-identify-perl (0.14-3+b2) ... Selecting previously unselected package libsub-name-perl:amd64. Preparing to unpack .../178-libsub-name-perl_0.27-1+b2_amd64.deb ... Unpacking libsub-name-perl:amd64 (0.27-1+b2) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../179-libnamespace-clean-perl_0.27-2_all.deb ... Unpacking libnamespace-clean-perl (0.27-2) ... Selecting previously unselected package libcurl3t64-gnutls:amd64. Preparing to unpack .../180-libcurl3t64-gnutls_8.7.1-5_amd64.deb ... Unpacking libcurl3t64-gnutls:amd64 (8.7.1-5) ... Selecting previously unselected package libwww-curl-perl:amd64. Preparing to unpack .../181-libwww-curl-perl_4.17-10+b2_amd64.deb ... Unpacking libwww-curl-perl:amd64 (4.17-10+b2) ... Selecting previously unselected package libwww-curl-simple-perl. Preparing to unpack .../182-libwww-curl-simple-perl_0.100191-3_all.deb ... Unpacking libwww-curl-simple-perl (0.100191-3) ... Selecting previously unselected package dh-r. Preparing to unpack .../183-dh-r_20231212_all.deb ... Unpacking dh-r (20231212) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../184-hdf5-helpers_1.10.10+repack-3.3_amd64.deb ... Unpacking hdf5-helpers (1.10.10+repack-3.3) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../185-libaec0_1.1.3-1_amd64.deb ... Unpacking libaec0:amd64 (1.1.3-1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../186-libsz2_1.1.3-1_amd64.deb ... Unpacking libsz2:amd64 (1.1.3-1) ... Selecting previously unselected package libaec-dev:amd64. Preparing to unpack .../187-libaec-dev_1.1.3-1_amd64.deb ... Unpacking libaec-dev:amd64 (1.1.3-1) ... Selecting previously unselected package libsnappy1v5:amd64. Preparing to unpack .../188-libsnappy1v5_1.2.0-2_amd64.deb ... Unpacking libsnappy1v5:amd64 (1.2.0-2) ... Selecting previously unselected package libblosc1:amd64. Preparing to unpack .../189-libblosc1_1.21.5+ds-1+b1_amd64.deb ... Unpacking libblosc1:amd64 (1.21.5+ds-1+b1) ... Selecting previously unselected package libblosc-dev:amd64. Preparing to unpack .../190-libblosc-dev_1.21.5+ds-1+b1_amd64.deb ... Unpacking libblosc-dev:amd64 (1.21.5+ds-1+b1) ... Selecting previously unselected package libcurl4-openssl-dev:amd64. Preparing to unpack .../191-libcurl4-openssl-dev_8.7.1-5_amd64.deb ... Unpacking libcurl4-openssl-dev:amd64 (8.7.1-5) ... Selecting previously unselected package libhdf5-103-1t64:amd64. Preparing to unpack .../192-libhdf5-103-1t64_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Selecting previously unselected package libhdf5-cpp-103-1t64:amd64. Preparing to unpack .../193-libhdf5-cpp-103-1t64_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-cpp-103-1t64:amd64 (1.10.10+repack-3.3) ... Selecting previously unselected package libhdf5-fortran-102t64:amd64. Preparing to unpack .../194-libhdf5-fortran-102t64_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-fortran-102t64:amd64 (1.10.10+repack-3.3) ... Selecting previously unselected package libhdf5-hl-100t64:amd64. Preparing to unpack .../195-libhdf5-hl-100t64_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-3.3) ... Selecting previously unselected package libhdf5-hl-fortran-100t64:amd64. Preparing to unpack .../196-libhdf5-hl-fortran-100t64_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-hl-fortran-100t64:amd64 (1.10.10+repack-3.3) ... Selecting previously unselected package libhdf5-hl-cpp-100t64:amd64. Preparing to unpack .../197-libhdf5-hl-cpp-100t64_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-hl-cpp-100t64:amd64 (1.10.10+repack-3.3) ... Selecting previously unselected package libssl-dev:amd64. Preparing to unpack .../198-libssl-dev_3.2.1-3_amd64.deb ... Unpacking libssl-dev:amd64 (3.2.1-3) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../199-libhdf5-dev_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-dev (1.10.10+repack-3.3) ... Selecting previously unselected package libsnappy-dev:amd64. Preparing to unpack .../200-libsnappy-dev_1.2.0-2_amd64.deb ... Unpacking libsnappy-dev:amd64 (1.2.0-2) ... Selecting previously unselected package libvbz-hdf-plugin0t64:amd64. Preparing to unpack .../201-libvbz-hdf-plugin0t64_1.0.2-3.1_amd64.deb ... Unpacking libvbz-hdf-plugin0t64:amd64 (1.0.2-3.1) ... Selecting previously unselected package libvbz-hdf-plugin-dev:amd64. Preparing to unpack .../202-libvbz-hdf-plugin-dev_1.0.2-3.1_amd64.deb ... Unpacking libvbz-hdf-plugin-dev:amd64 (1.0.2-3.1) ... Selecting previously unselected package libzstd-dev:amd64. Preparing to unpack .../203-libzstd-dev_1.5.5+dfsg2-2_amd64.deb ... Unpacking libzstd-dev:amd64 (1.5.5+dfsg2-2) ... Selecting previously unselected package r-bioc-biocgenerics. Preparing to unpack .../204-r-bioc-biocgenerics_0.48.1-2_all.deb ... Unpacking r-bioc-biocgenerics (0.48.1-2) ... Selecting previously unselected package r-bioc-rhdf5lib. Preparing to unpack .../205-r-bioc-rhdf5lib_1.24.2+dfsg-1+b1_amd64.deb ... Unpacking r-bioc-rhdf5lib (1.24.2+dfsg-1+b1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libgraphite2-3:amd64 (1.3.14-2) ... Setting up libpixman-1-0:amd64 (0.42.2-1+b1) ... Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... Setting up libfile-which-perl (1.27-2) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up libzstd-dev:amd64 (1.5.5+dfsg2-2) ... Setting up bsdextrautils (2.40-8) ... Setting up hdf5-helpers (1.10.10+repack-3.3) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libdatrie1:amd64 (0.2.13-3) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libclone-perl:amd64 (0.46-1+b2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libsub-identify-perl (0.14-3+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up unzip (6.0-28) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libtry-tiny-perl (0.31-2) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up libdeflate0:amd64 (1.20-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libcom-err2:amd64 (1.47.1~rc2-1) ... Setting up file (1:5.45-3) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up libpcre2-16-0:amd64 (10.42-4+b1) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libsnappy1v5:amd64 (1.2.0-2) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Jun 11 01:33:59 UTC 2025. Universal Time is now: Wed Jun 11 01:33:59 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libvbz-hdf-plugin0t64:amd64 (1.0.2-3.1) ... Setting up zip (3.0-13) ... Setting up libpackage-stash-xs-perl:amd64 (0.30-1+b3) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:amd64 (10.42-4+b1) ... Setting up libglib2.0-0t64:amd64 (2.80.0-10) ... No schema files found: doing nothing. Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libpkgconf3:amd64 (1.8.1-1+b2) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libswitch-perl (2.17-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-3) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libncurses6:amd64 (6.4+20240414-1) ... Setting up libfribidi0:amd64 (1.0.13-3+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:amd64 (3.2.1-3) ... Setting up libpng16-16t64:amd64 (1.6.43-5) ... Setting up libvariable-magic-perl (0.64-1) ... Setting up libio-html-perl (1.004-3) ... Setting up libtcl8.6:amd64 (8.6.14+dfsg-1) ... Setting up autopoint (0.21-14) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b1) ... Setting up icu-devtools (72.1-4+b1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-1+b2) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up libparams-util-perl (1.102-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:amd64 (14-20240429-1) ... Setting up autoconf (2.71-3) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up liblzma-dev:amd64 (5.6.1+really5.4.5-1) ... Setting up libsub-name-perl:amd64 (0.27-1+b2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3.1) ... Setting up libpcre2-posix3:amd64 (10.42-4+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libtiff6:amd64 (4.5.1+git230720-4) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libblosc1:amd64 (1.21.5+ds-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libthai-data (0.1.29-2) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-4.1+b2) ... Setting up libgfortran-13-dev:amd64 (13.2.0-24) ... Setting up openssl (3.2.1-3) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up libdeflate-dev:amd64 (1.20-1) ... Setting up readline-common (8.2-4) ... Setting up libicu-dev:amd64 (72.1-4+b1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up liburi-perl (5.28-1) ... Setting up libblas-dev:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.1.3-1) ... Setting up dctrl-tools (2.24-3+b1) ... Setting up libbz2-dev:amd64 (1.0.8-5.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libice6:amd64 (2:1.0.10-1+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libncurses-dev:amd64 (6.4+20240414-1) ... Setting up libxcb1:amd64 (1.17.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libpcre2-dev:amd64 (10.42-4+b1) ... Setting up libvbz-hdf-plugin-dev:amd64 (1.0.2-3.1) ... Setting up libtool (2.4.7-7) ... Setting up libblosc-dev:amd64 (1.21.5+ds-1+b1) ... Setting up libxcb-render0:amd64 (1.17.0-1) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libsnappy-dev:amd64 (1.2.0-2) ... Setting up libpng-dev:amd64 (1.6.43-5) ... Setting up libaec-dev:amd64 (1.1.3-1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3) ... Setting up libxcb-shm0:amd64 (1.17.0-1) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1) ... Setting up gfortran-13-x86-64-linux-gnu (13.2.0-24) ... Setting up libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Setting up pkgconf:amd64 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libthai0:amd64 (0.1.29-2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Setting up gfortran-13 (13.2.0-24) ... Setting up liblapack-dev:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-4) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libharfbuzz0b:amd64 (8.3.0-2+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libmro-compat-perl (0.15-2) ... Setting up libsm6:amd64 (2:1.2.3-1+b1) ... Setting up libxmuu1:amd64 (2:1.1.3-3+b2) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libeval-closure-perl (0.14-3) ... Setting up libpaper1:amd64 (1.1.29+b1) ... Creating config file /etc/papersize with new version Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libcurl4t64:amd64 (8.7.1-5) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b3) ... Setting up libpango-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libcurl3t64-gnutls:amd64 (8.7.1-5) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libwww-curl-perl:amd64 (4.17-10+b2) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up libreadline-dev:amd64 (8.2-4) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7) ... Setting up gfortran (4:13.2.0-7) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.18.0-3+b1) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libcurl4-openssl-dev:amd64 (8.7.1-5) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up xauth (1:1.1.2-1) ... Setting up libxss1:amd64 (1:1.2.3-1+b1) ... Setting up libpangoft2-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libpangocairo-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-3.3) ... Setting up libxft2:amd64 (2.3.6-1+b1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libtk8.6:amd64 (8.6.14-1) ... Setting up libhdf5-cpp-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-fortran-102t64:amd64 (1.10.10+repack-3.3) ... Setting up debhelper (13.15.3) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up libclass-load-perl (0.25-2) ... Setting up r-base-core (4.4.0-2) ... Creating config file /etc/R/Renviron with new version Setting up libpackage-deprecationmanager-perl (0.18-1) ... Setting up libdevel-overloadinfo-perl (0.007-1) ... Setting up libclass-load-xs-perl (0.10-2+b3) ... Setting up libhdf5-hl-cpp-100t64:amd64 (1.10.10+repack-3.3) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up r-bioc-biocgenerics (0.48.1-2) ... Setting up r-base-dev (4.4.0-2) ... Setting up libmoose-perl:amd64 (2.2207-1+b1) ... Setting up libhdf5-hl-fortran-100t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-dev (1.10.10+repack-3.3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-curl-simple-perl (0.100191-3) ... Setting up r-bioc-rhdf5lib (1.24.2+dfsg-1+b1) ... Setting up dh-r (20231212) ... Processing triggers for libc-bin (2.38-8) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../r-bioc-rhdf5filters_1.14.1+dfsg-3_source.changes dpkg-buildpackage: info: source package r-bioc-rhdf5filters dpkg-buildpackage: info: source version 1.14.1+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg' rm -rf src/vbz find . -name "*.o" -delete find . -name "*.so" -delete find . -name "*.a" -delete dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/r-bioc-rhdf5filters.substvars debian/files rm -fr -- debian/r-bioc-rhdf5filters/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg' debian/rules binary dh binary --buildsystem R dh_update_autotools_config -O--buildsystem=R dh_autoreconf -O--buildsystem=R find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after dh_auto_configure -O--buildsystem=R dh_auto_build -O--buildsystem=R dh_auto_test -O--buildsystem=R rm -fr -- /tmp/dh-xdg-rundir-77tajP5A create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=R dh_prep -O--buildsystem=R rm -f -- debian/r-bioc-rhdf5filters.substvars rm -fr -- debian/.debhelper/generated/r-bioc-rhdf5filters/ debian/r-bioc-rhdf5filters/ debian/tmp/ dh_auto_install --destdir=debian/r-bioc-rhdf5filters/ -O--buildsystem=R install -m0755 -d /build/reproducible-path/r-bioc-rhdf5filters-1.14.1\+dfsg/debian/r-bioc-rhdf5filters I: R Package: rhdf5filters Version: 1.14.1 I: Building using R version 4.4.0-2 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Tue, 12 Dec 2023 15:01:58 +0100 mkdir -p /build/reproducible-path/r-bioc-rhdf5filters-1.14.1\+dfsg/debian/r-bioc-rhdf5filters/usr/lib/R/site-library R CMD INSTALL -l /build/reproducible-path/r-bioc-rhdf5filters-1.14.1\+dfsg/debian/r-bioc-rhdf5filters/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 12 Dec 2023 15:01:58 +0100'" * installing *source* package 'rhdf5filters' ... ** using staged installation checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed configure: is NOT Bioc build machine configure: configuring BZIP2 filter... checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for bzlib.h... yes checking for BZ2_bzDecompressInit in -lbz2... yes configure: Using system bzip2 library configure: configuring the Zstd filter... checking for zstd.h... yes checking for ZSTD_decompress in -lzstd... yes configure: Using system Zstd library configure: configuring the BLOSC filter... checking for blosc.h... yes checking for blosc_compress in -lblosc... yes configure: Using system BLOSC library configure: configuring the VBZ filter checking whether C compiler accepts -mavx... yes checking for x86 avx instruction support... yes configure: creating ./config.status config.status: creating src/bzip2/Makefile config.status: creating src/zstd/Makefile config.status: creating src/blosc/Makefile config.status: creating src/Makevars ** libs using C compiler: 'gcc (Debian 13.2.0-24) 13.2.0' make[1]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src' make -C blosc make[2]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/blosc' g++ -std=gnu++17 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fpic -shared -I/usr/include/hdf5/serial H5Zblosc.cpp \ -Wl,-z,relro -lblosc -lzstd -lz -o libH5Zblosc.so cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ make[2]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/blosc' make -C bzip2 make[2]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/bzip2' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fpic -shared H5Zbzip2.c -I/usr/include/hdf5/serial \ -lbz2 -Wl,-z,relro -o libH5Zbz2.so -Wl,-z,relro make[2]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/bzip2' make -C lzf make[2]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/lzf' make -C lzf make[3]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/lzf/lzf' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fpic -c lzf_c.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fpic -c lzf_d.c rm -f liblzf.a ar cq liblzf.a lzf_c.o lzf_d.o ranlib liblzf.a make[3]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/lzf/lzf' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fpic -shared H5Zlzf.c -I/usr/include/hdf5/serial \ -I./lzf/ ./lzf/liblzf.a -Wl,-z,relro -o libH5Zlzf.so make[2]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/lzf' make -C zstd make[2]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/zstd' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fpic -shared H5Zzstd.c -I/usr/include/hdf5/serial \ -lzstd -Wl,-z,relro -o libH5Zzstd.so make[2]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src/zstd' mkdir -p vbz cp /usr/lib/x86_64-linux-gnu/libvbz_hdf_plugin.so vbz/libH5Zvbz.so mkdir -p "/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/debian/r-bioc-rhdf5filters/usr/lib/R/site-library/00LOCK-r-bioc-rhdf5filters-1.14.1+dfsg/00new/rhdf5filters/lib/" cp bzip2/libH5Zbz2.so blosc/libH5Zblosc.so lzf/libH5Zlzf.so zstd/libH5Zzstd.so vbz/libH5Zvbz.so "/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/debian/r-bioc-rhdf5filters/usr/lib/R/site-library/00LOCK-r-bioc-rhdf5filters-1.14.1+dfsg/00new/rhdf5filters/lib/" gcc -I"/usr/share/R/include" -DNDEBUG -I/usr/include/hdf5/serial -I'/usr/lib/R/site-library/Rhdf5lib/include' -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c rhdf5filters.c -o rhdf5filters.o gcc -shared -L/usr/lib/R/lib -Wl,-z,relro -o rhdf5filters.so rhdf5filters.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src' make[1]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src' make[1]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/src' installing to /build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg/debian/r-bioc-rhdf5filters/usr/lib/R/site-library/00LOCK-r-bioc-rhdf5filters-1.14.1+dfsg/00new/rhdf5filters/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rhdf5filters) rm -f /build/reproducible-path/r-bioc-rhdf5filters-1.14.1\+dfsg/debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/LICENSE I: Using r-bioc-biocstyle for Suggests:BiocStyle I: Using r-cran-knitr for Suggests:knitr I: Using r-cran-rmarkdown for Suggests:rmarkdown I: Using r-cran-tinytest for Suggests:tinytest I: Using r-bioc-rhdf5 for Suggests:rhdf5 (>= 2.34.0) I: Using r-bioc-rhdf5lib for LinkingTo:Rhdf5lib I: BioConductor API version: r-api-bioc-3.18 I: Use r-bioc-rhdf5filters as Debian binary package for variables substitution debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg' dh_install make[1]: Leaving directory '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg' dh_installdocs -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/usr/share/doc/r-bioc-rhdf5filters install -p -m0644 debian/copyright debian/r-bioc-rhdf5filters/usr/share/doc/r-bioc-rhdf5filters/copyright dh_installchangelogs -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/usr/share/doc/r-bioc-rhdf5filters install -p -m0644 debian/.debhelper/generated/r-bioc-rhdf5filters/dh_installchangelogs.dch.trimmed debian/r-bioc-rhdf5filters/usr/share/doc/r-bioc-rhdf5filters/changelog.Debian dh_installsystemduser -O--buildsystem=R dh_lintian -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/usr/share/lintian/overrides install -p -m0644 debian/r-bioc-rhdf5filters.lintian-overrides debian/r-bioc-rhdf5filters/usr/share/lintian/overrides/r-bioc-rhdf5filters dh_perl -O--buildsystem=R dh_link -O--buildsystem=R dh_strip_nondeterminism -O--buildsystem=R Using 1702389718 as canonical time Normalizing debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/help/figures/logo.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=R cd debian/r-bioc-rhdf5filters chmod a-x usr/share/doc/r-bioc-rhdf5filters/changelog.Debian gzip -9nf usr/share/doc/r-bioc-rhdf5filters/changelog.Debian cd '/build/reproducible-path/r-bioc-rhdf5filters-1.14.1+dfsg' dh_fixperms -O--buildsystem=R find debian/r-bioc-rhdf5filters ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/r-bioc-rhdf5filters/usr/share/doc -type f -a -true -a ! -regex 'debian/r-bioc-rhdf5filters/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/r-bioc-rhdf5filters/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/r-bioc-rhdf5filters/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/r-bioc-rhdf5filters -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/r-bioc-rhdf5filters/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=R dh_dwz -a -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/r-bioc-rhdf5filters/usr/lib/debug/.dwz/x86_64-linux-gnu/r-bioc-rhdf5filters.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/r-bioc-rhdf5filters.debug -- debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zblosc.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zbz2.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zlzf.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zvbz.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zzstd.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/libs/rhdf5filters.so dwz: debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zvbz.so: .debug_info section not present objcopy --compress-debug-sections debian/r-bioc-rhdf5filters/usr/lib/debug/.dwz/x86_64-linux-gnu/r-bioc-rhdf5filters.debug chmod 0644 -- debian/r-bioc-rhdf5filters/usr/lib/debug/.dwz/x86_64-linux-gnu/r-bioc-rhdf5filters.debug dh_strip -a -O--buildsystem=R install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zlzf.so debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/05/c0f89a456cc95e916fdfce097439da5e9cde86.debug chmod 0644 -- debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/05/c0f89a456cc95e916fdfce097439da5e9cde86.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zlzf.so objcopy --add-gnu-debuglink debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/05/c0f89a456cc95e916fdfce097439da5e9cde86.debug debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zlzf.so install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/1a objcopy --only-keep-debug --compress-debug-sections debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zzstd.so debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/1a/9e3adfb6810f47db4a855705b38215f9cc6f41.debug chmod 0644 -- debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/1a/9e3adfb6810f47db4a855705b38215f9cc6f41.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zzstd.so objcopy --add-gnu-debuglink debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/1a/9e3adfb6810f47db4a855705b38215f9cc6f41.debug debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zzstd.so install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zbz2.so debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/90/66b6c0784179d461f2b819bf94a21f032de8d0.debug chmod 0644 -- debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/90/66b6c0784179d461f2b819bf94a21f032de8d0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zbz2.so objcopy --add-gnu-debuglink debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/90/66b6c0784179d461f2b819bf94a21f032de8d0.debug debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zbz2.so install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/6e objcopy --only-keep-debug --compress-debug-sections debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zblosc.so debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/6e/97da4773d21b5dd8510b29094be1d1668733b1.debug chmod 0644 -- debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/6e/97da4773d21b5dd8510b29094be1d1668733b1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zblosc.so objcopy --add-gnu-debuglink debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/6e/97da4773d21b5dd8510b29094be1d1668733b1.debug debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zblosc.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zvbz.so install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/libs/rhdf5filters.so debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/25/06771079c50908ffb14a8bab4e8ab10a34db2a.debug chmod 0644 -- debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/25/06771079c50908ffb14a8bab4e8ab10a34db2a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/libs/rhdf5filters.so objcopy --add-gnu-debuglink debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.build-id/25/06771079c50908ffb14a8bab4e8ab10a34db2a.debug debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/libs/rhdf5filters.so install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/r-bioc-rhdf5filters/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/r-bioc-rhdf5filters/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/r-bioc-rhdf5filters/usr/lib/debug install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/share/doc ln -s r-bioc-rhdf5filters debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/usr/share/doc/r-bioc-rhdf5filters-dbgsym install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters dh_makeshlibs -a -O--buildsystem=R rm -f debian/r-bioc-rhdf5filters/DEBIAN/shlibs install -m0755 -d debian/r-bioc-rhdf5filters/DEBIAN echo "libvbz_hdf_plugin 0 r-bioc-rhdf5filters (>= 1.14.1+dfsg)" >> debian/r-bioc-rhdf5filters/DEBIAN/shlibs chmod 0644 -- debian/r-bioc-rhdf5filters/DEBIAN/shlibs mv debian/.debhelper/generated/r-bioc-rhdf5filters/triggers.new debian/.debhelper/generated/r-bioc-rhdf5filters/triggers dh_shlibdeps -a -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/DEBIAN dpkg-shlibdeps -Tdebian/r-bioc-rhdf5filters.substvars debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zlzf.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zzstd.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zbz2.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zblosc.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/lib/libH5Zvbz.so debian/r-bioc-rhdf5filters/usr/lib/R/site-library/rhdf5filters/libs/rhdf5filters.so dh_installdeb -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/DEBIAN install -p -m0644 debian/.debhelper/generated/r-bioc-rhdf5filters/triggers debian/r-bioc-rhdf5filters/DEBIAN/triggers dh_gencontrol -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/DEBIAN echo misc:Depends= >> debian/r-bioc-rhdf5filters.substvars echo misc:Pre-Depends= >> debian/r-bioc-rhdf5filters.substvars install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/DEBIAN dpkg-gencontrol -pr-bioc-rhdf5filters -ldebian/changelog -Tdebian/r-bioc-rhdf5filters.substvars -cdebian/control -Pdebian/.debhelper/r-bioc-rhdf5filters/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=r-bioc-rhdf5filters-dbgsym "-DDepends=r-bioc-rhdf5filters (= \${binary:Version})" "-DDescription=debug symbols for r-bioc-rhdf5filters" "-DBuild-Ids=05c0f89a456cc95e916fdfce097439da5e9cde86 1a9e3adfb6810f47db4a855705b38215f9cc6f41 2506771079c50908ffb14a8bab4e8ab10a34db2a 6e97da4773d21b5dd8510b29094be1d1668733b1 9066b6c0784179d461f2b819bf94a21f032de8d0" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/DEBIAN/control dpkg-gencontrol -pr-bioc-rhdf5filters -ldebian/changelog -Tdebian/r-bioc-rhdf5filters.substvars -cdebian/control -Pdebian/r-bioc-rhdf5filters chmod 0644 -- debian/r-bioc-rhdf5filters/DEBIAN/control dh_md5sums -O--buildsystem=R install -m0755 -d debian/r-bioc-rhdf5filters/DEBIAN cd debian/r-bioc-rhdf5filters >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/r-bioc-rhdf5filters/DEBIAN/md5sums install -m0755 -d debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/DEBIAN cd debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=R dpkg-deb --root-owner-group --build debian/.debhelper/r-bioc-rhdf5filters/dbgsym-root .. dpkg-deb --root-owner-group --build debian/r-bioc-rhdf5filters .. dpkg-deb: building package 'r-bioc-rhdf5filters-dbgsym' in '../r-bioc-rhdf5filters-dbgsym_1.14.1+dfsg-3_amd64.deb'. dpkg-deb: building package 'r-bioc-rhdf5filters' in '../r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.deb'. dpkg-genbuildinfo --build=binary -O../r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo dpkg-genchanges --build=binary -O../r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1043856 and its subdirectories I: Current time: Tue Jun 10 13:34:47 -12 2025 I: pbuilder-time-stamp: 1749605687 Wed May 8 19:11:49 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Wed May 8 19:11:49 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Wed May 8 19:14:22 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Wed May 8 19:14:22 UTC 2024 I: r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.changes: Format: 1.8 Date: Tue, 12 Dec 2023 15:01:58 +0100 Source: r-bioc-rhdf5filters Binary: r-bioc-rhdf5filters r-bioc-rhdf5filters-dbgsym Architecture: amd64 Version: 1.14.1+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers Changed-By: Andreas Tille Description: r-bioc-rhdf5filters - GNU R HDF5 compression filters Closes: 1056497 Changes: r-bioc-rhdf5filters (1.14.1+dfsg-3) unstable; urgency=medium . * Team upload * Remove vbz test on architectures where it is not available Closes: #1056497 Checksums-Sha1: 7c67f25238cb08d5a8d6c6c42aad63f34a6a0e3b 21168 r-bioc-rhdf5filters-dbgsym_1.14.1+dfsg-3_amd64.deb 30ed23de970036d5dddc9ede4e74d1d46f9f5e52 11141 r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo 809159a94aa4b9ea9e57aa0d9fb5ce5fe60d8c9d 138784 r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.deb Checksums-Sha256: 46a31037a070f03fa430e44323cfdcfc1beea7846372b0c93355cda7cf47ca90 21168 r-bioc-rhdf5filters-dbgsym_1.14.1+dfsg-3_amd64.deb c0fa530cdab87d39ad2e1fc71339443d7ae728394244b7fc7466efc5c2fed5f2 11141 r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo 0b4aa7da505391a28b686f7d1ffb8a25374db48d44340a40cbacab039d52f6a4 138784 r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.deb Files: 94ca268b4c44eb33961e496beec6891d 21168 debug optional r-bioc-rhdf5filters-dbgsym_1.14.1+dfsg-3_amd64.deb 94a03d77c8ab7de79b260fc945a106d5 11141 gnu-r optional r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo affa6cca0b05d4f5cba669a75c1f5ade 138784 gnu-r optional r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.deb Wed May 8 19:14:23 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_10-5562.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.82ZwUKZQ/r-bioc-rhdf5filters_1.14.1+dfsg-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.82ZwUKZQ/r-bioc-rhdf5filters_1.14.1+dfsg-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.82ZwUKZQ/r-bioc-rhdf5filters_1.14.1+dfsg-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.82ZwUKZQ/b1/r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.82ZwUKZQ/b2/r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.355s) 0.355s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 686ms CPU time consumed: 683ms Wed May 8 19:14:25 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Wed May 8 19:14:25 UTC 2024 I: r-bioc-rhdf5filters from unstable built successfully and reproducibly on amd64. Wed May 8 19:14:26 UTC 2024 I: Submitting .buildinfo files to external archives: Wed May 8 19:14:26 UTC 2024 I: Submitting 12K b1/r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo.asc Wed May 8 19:14:28 UTC 2024 I: Submitting 12K b2/r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo.asc Wed May 8 19:14:30 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed May 8 19:14:30 UTC 2024 I: Done submitting .buildinfo files. Wed May 8 19:14:30 UTC 2024 I: Removing signed r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo.asc files: removed './b1/r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo.asc' removed './b2/r-bioc-rhdf5filters_1.14.1+dfsg-3_amd64.buildinfo.asc'